AT4G26940

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
13529260 .. 13532755
3496 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26940.2

Sequence Viewer

Length: 1224 bp
ATGTCGTTGAAGCATCATCACAGAGGATTAGAGCTCTCTGCTTCGAAGAGTTTTGTCTCAAAGAAATGGACTTTATTTCTCTGTATCGGTTTCTTCTGCGCAGGAATTCTCTTCTCCGACAGAATGTGGCCAGAGCCTGAATCCAATGTTGTATCAAGGGACACAGTAGCATCAGATGAACGGCTGCGGTTAGAGTCTGAGGACTGTGATTCATCAAAAAAGGGTTTAAAGCGTGAATCGAAAGACATCCTTGGAGATGTTTACAAGAGTCCAGATGCAATTCAAACGCTTGATAAAACGATTTCAAAGCTGGAAACAGAACTGGCCGATGCAAGAGCTGCGCAAGAATCTATCATGAATGGTTCACCAGTTTCTGATGACTTTAAGCTCCCTGAAACTGTCACTAAAAGAAAGTATCTGATGGTTGTTGGTGTTAATACTGCGTTTAGCAGCAGAAAGCGCAGGGATTCAGTCCGTGCTACTTGGATGCCTCCCGGTGAGGAGAGAAAGAAGCTCGAGGAAGAGAAAGGGATCGTGATGCGGTTTGTGATAGGCCATAGTTCTACTCCCGGTGGAATTCTTGATAGAGCGATTCAGGCTGAAGAAAGTAAACATGGAGACTTCTTGAGGCTGGATCATGTTGAAGGTTATCTCGAGCTGTCAGCAAAGACTAAAACTTACTTTACCACGGCTTTTGCAATGTGGGATGCAGACTTCTACGTCAAAGTCGATGATGATGTGCATGTAAATATAGCCACGCTTGGAGCAGAATTAGCAAGATACCGGATGAAGCCCCGAGTGTACATTGGTTGCATGAAATCTGGACCTGTTCTTGCTCAGAAAGGAGTGAGATATCATGAACCCGAATACTGGAAATTTGGAGAAGAGGGTAACAAATACTTCCGCCATGCCACAGGTCAGCTCTATGCAATATCCAGGGAGTTGGCGTCTTACATATCGATAAACCAAAACGTACTTCACAAATATGTGAATGAAGATGTCTCTTTAGGATCATGGTTTCTTGGATTAGATGTGGAGCATGTAGATGACCGTAGGCTATGTTGTGGTACAACAGATTGTGAGTGGAAGGCGCAGGCGGGCAACATCTGTGTTGCCTCGTTCGATTGGAGCTGCAGTGGGATTTGTAGATCAGCGGATAGGATGAAGGATGTTCATCGTAGGTGTGGAGAAGGTGAAAAGGCCCTTCTGGCTGCATCTTTCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

407

Amino Acids

46.02

Weight (kDa)

6.87

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4094 PF13334 20 - 113 1.6e-30 Domain of unknown function (DUF4094)
Galactosyl_T PF01762 153 - 282 1.7e-32 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 719
Acc16I TGCGCA 2 cut(s) 100, 342
AciI CCGC 5 cut(s) 187, 541, 904, 1097, 1154
AclWI GGATC 3 cut(s) 539, 642, 1018
AcoI YGGCCR 2 cut(s) 128, 324
AcsI RAATTY 3 cut(s) 105, 576, 875
AcuI CTGAAG 1 cut(s) 621
AcyI GRCGYC 1 cut(s) 947
AfaI GTAC 3 cut(s) 803, 975, 1069
AfiI CCNNNNNNNGG 1 cut(s) 870
AgsI TTSAA 4 cut(s) 10, 284, 306, 644
AjnI CCWGG 1 cut(s) 935
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
AluBI AGCT 8 cut(s) 34, 310, 338, 388, 514, 658, 922, 1131
AluI AGCT 8 cut(s) 34, 310, 338, 388, 514, 658, 922, 1131
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 3 cut(s) 61, 612, 1006
AlwI GGATC 3 cut(s) 539, 642, 1018
AlwNI CAGNNNCTG 2 cut(s) 137, 374
Ama87I CYCGRG 3 cut(s) 515, 653, 795
AoxI GGCC 4 cut(s) 128, 324, 553, 1200
ApeKI GCWGC 5 cut(s) 184, 338, 450, 1131, 1211
ApoI RAATTY 3 cut(s) 105, 576, 875
AspLEI GCGC 4 cut(s) 101, 343, 462, 1093
AspS9I GGNCC 2 cut(s) 824, 1201
AsuC2I CCSGG 2 cut(s) 495, 570
AsuHPI GGTGA 3 cut(s) 357, 509, 1205
AsuII TTCGAA 1 cut(s) 44
AvaI CYCGRG 3 cut(s) 515, 653, 795
AvaII GGWCC 1 cut(s) 824
BalI TGGCCA 1 cut(s) 130
BanII GRGCYC 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 5 cut(s) 171, 325, 462, 1118, 1198
BccI CCATC 1 cut(s) 415
BceAI ACGGC 2 cut(s) 197, 705
BciT130I CCWGG 1 cut(s) 937
BcnI CCSGG 2 cut(s) 495, 570
BcoDI GTCTC 3 cut(s) 61, 612, 1006
BfmI CTRYAG 1 cut(s) 1132
BglI GCCNNNNNGGC 1 cut(s) 1208
BisI GCNGC 5 cut(s) 185, 339, 451, 1132, 1212
BlsI GCNGC 5 cut(s) 186, 340, 452, 1133, 1213
Bme1390I CCNGG 3 cut(s) 495, 570, 937
Bme18I GGWCC 1 cut(s) 824
BmeT110I CYCGRG 3 cut(s) 515, 653, 795
BmgT120I GGNCC 2 cut(s) 824, 1201
BmrFI CCNGG 3 cut(s) 495, 570, 937
BmsI GCATC 7 cut(s) 22, 179, 265, 319, 477, 528, 697
Bpu14I TTCGAA 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 646
BpuMI CCSGG 2 cut(s) 495, 570
Bsa29I ATCGAT 1 cut(s) 959
BsaBI GATNNNNATC 1 cut(s) 1173
BsaHI GRCGYC 1 cut(s) 947
BsaJI CCNNGG 3 cut(s) 250, 687, 936
BsaWI WCCGGW 1 cut(s) 783
BsaXI ACNNNNNCTCC 4 cut(s) 932, 962, 1120, 1150
Bsc4I CCNNNNNNNGG 1 cut(s) 870
Bse1I ACTGG 3 cut(s) 327, 368, 875
Bse3DI GCAATG 1 cut(s) 705
Bse8I GATNNNNATC 1 cut(s) 1173
BseBI CCWGG 1 cut(s) 937
BseCI ATCGAT 1 cut(s) 959
BseDI CCNNGG 3 cut(s) 250, 687, 936
BseGI GGATG 6 cut(s) 246, 492, 712, 792, 1167, 1174
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 1 cut(s) 870
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 2 cut(s) 189, 851
BseNI ACTGG 3 cut(s) 327, 368, 875
BseRI GAGGAG 1 cut(s) 515
BseXI GCAGC 5 cut(s) 171, 325, 462, 1118, 1198
BshFI GGCC 4 cut(s) 130, 326, 555, 1202
BshVI ATCGAT 1 cut(s) 959
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 3 cut(s) 515, 653, 795
BsiSI CCGG 3 cut(s) 495, 570, 784
BslFI GGGAC 1 cut(s) 173
BslI CCNNNNNNNGG 1 cut(s) 870
BsmAI GTCTC 3 cut(s) 61, 612, 1006
BsmFI GGGAC 1 cut(s) 173
BsnI GGCC 4 cut(s) 130, 326, 555, 1202
BsoBI CYCGRG 3 cut(s) 515, 653, 795
Bsp119I TTCGAA 1 cut(s) 44
Bsp1286I GDGCHC 1 cut(s) 36
Bsp1407I TGTACA 1 cut(s) 801
Bsp143I GATC 4 cut(s) 531, 634, 1010, 1148
BspACI CCGC 5 cut(s) 187, 541, 904, 1097, 1154
BspANI GGCC 4 cut(s) 130, 326, 555, 1202
BspCNI CTCAG 2 cut(s) 190, 850
BspDI ATCGAT 1 cut(s) 959
BspHI TCATGA 2 cut(s) 354, 856
BspMAI CTGCAG 1 cut(s) 1136
BspPI GGATC 3 cut(s) 539, 642, 1018
BspT104I TTCGAA 1 cut(s) 44
BsrDI GCAATG 1 cut(s) 705
BsrGI TGTACA 1 cut(s) 801
BsrI ACTGG 3 cut(s) 327, 368, 875
BssECI CCNNGG 3 cut(s) 250, 687, 936
BssMI GATC 4 cut(s) 531, 634, 1010, 1148
BssNI GRCGYC 1 cut(s) 947
BssT1I CCWWGG 1 cut(s) 250
Bst2UI CCWGG 1 cut(s) 937
Bst4CI ACNGT 4 cut(s) 166, 206, 400, 1052
Bst6I CTCTTC 4 cut(s) 41, 116, 516, 879
BstACI GRCGYC 1 cut(s) 947
BstAPI GCANNNNNTGC 1 cut(s) 338
BstAUI TGTACA 1 cut(s) 801
BstBI TTCGAA 1 cut(s) 44
BstC8I GCNNGC 2 cut(s) 1095, 1099
BstDEI CTNAG 2 cut(s) 198, 837
BstDSI CCRYGG 1 cut(s) 687
BstF5I GGATG 6 cut(s) 246, 492, 712, 792, 1167, 1174
BstHHI GCGC 4 cut(s) 101, 343, 462, 1093
BstKTI GATC 4 cut(s) 534, 637, 1013, 1151
BstMAI GTCTC 3 cut(s) 61, 612, 1006
BstMBI GATC 4 cut(s) 531, 634, 1010, 1148
BstMWI GCNNNNNNNGC 5 cut(s) 338, 459, 596, 773, 1208
BstNI CCWGG 1 cut(s) 937
BstNSI RCATGY 2 cut(s) 746, 1043
BstSCI CCNGG 3 cut(s) 493, 568, 935
BstSFI CTRYAG 1 cut(s) 1132
BstV1I GCAGC 5 cut(s) 171, 325, 462, 1118, 1198
BstXI CCANNNNNNTGG 1 cut(s) 943
Bsu15I ATCGAT 1 cut(s) 959
BsuRI GGCC 4 cut(s) 130, 326, 555, 1202
BsuTUI ATCGAT 1 cut(s) 959
BtgI CCRYGG 1 cut(s) 687
BtsCI GGATG 6 cut(s) 246, 492, 712, 792, 1167, 1174
BtsI GCAGTG 1 cut(s) 1141
BtsIMutI CAGTG 1 cut(s) 1141
Cac8I GCNNGC 2 cut(s) 1095, 1099
CaiI CAGNNNCTG 2 cut(s) 137, 374
CciI TCATGA 2 cut(s) 354, 856
CfoI GCGC 4 cut(s) 101, 343, 462, 1093
Cfr13I GGNCC 2 cut(s) 824, 1201
ClaI ATCGAT 1 cut(s) 959
CseI GACGC 1 cut(s) 936
Csp6I GTAC 3 cut(s) 802, 974, 1068
CspCI CAANNNNNGTGG 2 cut(s) 676, 711
CviAII CATG 9 cut(s) 355, 614, 638, 743, 814, 857, 908, 1014, 1040
CviQI GTAC 3 cut(s) 802, 974, 1068
DdeI CTNAG 2 cut(s) 198, 837
DpnI GATC 4 cut(s) 533, 636, 1012, 1150
DpnII GATC 4 cut(s) 531, 634, 1010, 1148
DraI TTTAAA 1 cut(s) 228
DrdI GACNNNNNNGTC 1 cut(s) 719
DseDI GACNNNNNNGTC 1 cut(s) 719
EaeI YGGCCR 2 cut(s) 128, 324
Eam1104I CTCTTC 4 cut(s) 41, 116, 516, 879
EarI CTCTTC 4 cut(s) 41, 116, 516, 879
EciI GGCGGA 1 cut(s) 893
Ecl136II GAGCTC 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 250
Eco24I GRGCYC 1 cut(s) 36
Eco32I GATATC 1 cut(s) 854
Eco47I GGWCC 1 cut(s) 824
Eco53kI GAGCTC 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 621
Eco88I CYCGRG 3 cut(s) 515, 653, 795
EcoICRI GAGCTC 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 1201
EcoRI GAATTC 2 cut(s) 105, 576
EcoRII CCWGG 1 cut(s) 935
EcoRV GATATC 1 cut(s) 854
EcoT14I CCWWGG 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 36
ErhI CCWWGG 1 cut(s) 250
FaeI CATG 9 cut(s) 358, 617, 641, 746, 817, 860, 911, 1017, 1043
FalI AAGNNNNNCTT 2 cut(s) 234, 266
FaqI GGGAC 1 cut(s) 173
FatI CATG 9 cut(s) 354, 613, 637, 742, 813, 856, 907, 1013, 1039
FauI CCCGC 1 cut(s) 1090
Fnu4HI GCNGC 5 cut(s) 185, 339, 451, 1132, 1212
FokI GGATG 6 cut(s) 233, 499, 719, 799, 1174, 1181
FriOI GRGCYC 1 cut(s) 36
Fsp4HI GCNGC 5 cut(s) 185, 339, 451, 1132, 1212
FspI TGCGCA 2 cut(s) 100, 342
GlaI GCGC 4 cut(s) 100, 342, 461, 1092
GluI GCNGC 5 cut(s) 185, 339, 451, 1132, 1212
HaeIII GGCC 4 cut(s) 130, 326, 555, 1202
HapII CCGG 3 cut(s) 495, 570, 784
HgaI GACGC 1 cut(s) 936
HhaI GCGC 4 cut(s) 101, 343, 462, 1093
Hin1I GRCGYC 1 cut(s) 947
Hin1II CATG 9 cut(s) 358, 617, 641, 746, 817, 860, 911, 1017, 1043
Hin6I GCGC 4 cut(s) 99, 341, 460, 1091
HinP1I GCGC 4 cut(s) 99, 341, 460, 1091
HinfI GANTC 8 cut(s) 140, 194, 209, 236, 268, 347, 467, 592
HpaII CCGG 3 cut(s) 495, 570, 784
HphI GGTGA 3 cut(s) 357, 509, 1205
Hpy166II GTNNAC 4 cut(s) 262, 365, 611, 802
Hpy188I TCNGA 7 cut(s) 118, 175, 199, 376, 420, 840, 1223
Hpy188III TCNNGA 8 cut(s) 272, 355, 535, 581, 625, 653, 822, 857
Hpy8I GTNNAC 4 cut(s) 262, 365, 611, 802
HpyAV CCTTC 5 cut(s) 638, 1081, 1159, 1184, 1214
HpyCH4III ACNGT 4 cut(s) 166, 206, 400, 1052
HpyCH4IV ACGT 2 cut(s) 720, 972
HpyCH4V TGCA 9 cut(s) 278, 332, 698, 710, 742, 813, 929, 1134, 1214
HpyF10VI GCNNNNNNNGC 5 cut(s) 338, 459, 596, 773, 1208
HpyF3I CTNAG 2 cut(s) 198, 837
HpySE526I ACGT 2 cut(s) 720, 972
Hsp92I GRCGYC 1 cut(s) 947
Hsp92II CATG 9 cut(s) 358, 617, 641, 746, 817, 860, 911, 1017, 1043
HspAI GCGC 4 cut(s) 99, 341, 460, 1091
Kzo9I GATC 4 cut(s) 531, 634, 1010, 1148
LmnI GCTCC 4 cut(s) 393, 764, 1036, 1128
Lsp1109I GCAGC 5 cut(s) 171, 325, 462, 1118, 1198
LweI GCATC 7 cut(s) 22, 179, 265, 319, 477, 528, 697
MaeII ACGT 2 cut(s) 720, 972
MaeIII GTNAC 2 cut(s) 400, 890
MalI GATC 4 cut(s) 533, 636, 1012, 1150
MboI GATC 4 cut(s) 531, 634, 1010, 1148
MboII GAAGA 7 cut(s) 58, 85, 103, 533, 614, 896, 1007
MhlI GDGCHC 1 cut(s) 36
MlsI TGGCCA 1 cut(s) 130
MluCI AATT 5 cut(s) 105, 279, 576, 770, 875
MluNI TGGCCA 1 cut(s) 130
MlyI GAGTC 2 cut(s) 203, 277
MmeI TCCRAC 1 cut(s) 141
MnlI CCTC 8 cut(s) 17, 193, 493, 501, 511, 621, 880, 1126
Mox20I TGGCCA 1 cut(s) 130
MscI TGGCCA 1 cut(s) 130
MseI TTAA 3 cut(s) 227, 384, 435
MslI CAYNNNNRTG 2 cut(s) 984, 1044
Msp20I TGGCCA 1 cut(s) 130
MspA1I CMGCKG 1 cut(s) 1154
MspI CCGG 3 cut(s) 495, 570, 784
MspR9I CCNGG 3 cut(s) 495, 570, 937
MvaI CCWGG 1 cut(s) 937
MwoI GCNNNNNNNGC 5 cut(s) 338, 459, 596, 773, 1208
NciI CCSGG 2 cut(s) 495, 570
NdeII GATC 4 cut(s) 531, 634, 1010, 1148
NlaIII CATG 9 cut(s) 358, 617, 641, 746, 817, 860, 911, 1017, 1043
NmuCI GTSAC 1 cut(s) 400
NsbI TGCGCA 2 cut(s) 100, 342
NspI RCATGY 2 cut(s) 746, 1043
NspV TTCGAA 1 cut(s) 44
PaeR7I CTCGAG 2 cut(s) 515, 653
PagI TCATGA 2 cut(s) 354, 856
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PfeI GAWTC 6 cut(s) 140, 209, 236, 347, 467, 592
PkrI GCNGC 5 cut(s) 186, 340, 452, 1133, 1213
PleI GAGTC 2 cut(s) 202, 276
PpsI GAGTC 2 cut(s) 202, 276
Psp124BI GAGCTC 1 cut(s) 36
Psp6I CCWGG 1 cut(s) 935
PspGI CCWGG 1 cut(s) 935
PspPI GGNCC 2 cut(s) 824, 1201
PspXI VCTCGAGB 1 cut(s) 515
PstI CTGCAG 1 cut(s) 1136
PstNI CAGNNNCTG 2 cut(s) 137, 374
RsaI GTAC 3 cut(s) 803, 975, 1069
RsaNI GTAC 3 cut(s) 802, 974, 1068
RseI CAYNNNNRTG 2 cut(s) 984, 1044
SacI GAGCTC 1 cut(s) 36
SaqAI TTAA 3 cut(s) 227, 384, 435
SatI GCNGC 5 cut(s) 185, 339, 451, 1132, 1212
Sau3AI GATC 4 cut(s) 531, 634, 1010, 1148
Sau96I GGNCC 2 cut(s) 824, 1201
SchI GAGTC 2 cut(s) 203, 277
ScrFI CCNGG 3 cut(s) 495, 570, 937
SduI GDGCHC 1 cut(s) 36
SfaNI GCATC 7 cut(s) 22, 179, 265, 319, 477, 528, 697
SfcI CTRYAG 1 cut(s) 1132
Sfr274I CTCGAG 2 cut(s) 515, 653
SfuI TTCGAA 1 cut(s) 44
SinI GGWCC 1 cut(s) 824
SlaI CTCGAG 2 cut(s) 515, 653
SmiMI CAYNNNNRTG 2 cut(s) 984, 1044
SmlI CTYRAG 3 cut(s) 515, 625, 653
SmoI CTYRAG 3 cut(s) 515, 625, 653
Sse9I AATT 5 cut(s) 105, 279, 576, 770, 875
SsiI CCGC 5 cut(s) 187, 541, 904, 1097, 1154
SstI GAGCTC 1 cut(s) 36
StyD4I CCNGG 3 cut(s) 493, 568, 935
StyI CCWWGG 1 cut(s) 250
TaaI ACNGT 4 cut(s) 166, 206, 400, 1052
TaiI ACGT 2 cut(s) 723, 975
TaqI TCGA 7 cut(s) 44, 239, 516, 654, 729, 959, 1122
TasI AATT 5 cut(s) 105, 279, 576, 770, 875
TatI WGTACW 1 cut(s) 801
TfiI GAWTC 6 cut(s) 140, 209, 236, 347, 467, 592
Tru1I TTAA 3 cut(s) 227, 384, 435
Tru9I TTAA 3 cut(s) 227, 384, 435
TscAI CASTG 1 cut(s) 1141
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 5 cut(s) 184, 338, 450, 1131, 1211
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 9 cut(s) 192, 201, 371, 803, 830, 873, 1008, 1163, 1178
TspGWI ACGGA 1 cut(s) 464
TspRI CASTG 1 cut(s) 1141
VpaK11BI GGWCC 1 cut(s) 824
XapI RAATTY 3 cut(s) 105, 576, 875
XceI RCATGY 2 cut(s) 746, 1043
XhoI CTCGAG 2 cut(s) 515, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.