AT4G28390

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
14041288 .. 14043347
2060 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G28390.1

Sequence Viewer

Length: 1140 bp
ATGGATGGATCAAAGCATCCATCAGTCTTTCAGAAGCTACATGGACAATCTTACTTGATCAATAGACTTTCTCCGAGTGTGCAAGCTCGTGGTTACTGTGTCTCTGGTGCTTATGTCAATGGAGGTTTGCAGAGTCTATTGCAGCCAACTAGCCATGGCGTTGGCTCGTCTCTTATACCTCATGGTTCATTTCCTGTATTAGCTCACGCTCCTAGTGAGAAAACTGGTACTGGTTTCTTGATCGATTTCCTTATGGGAGGAGTCTCAGCTGCTGTTTCGAAGACGGCAGCCGCGCCTATAGAGCGTGTGAAGCTCTTGATTCAGAATCAAGATGAAATGATCAAAGCTGGGCGTCTCTCTGAGCCATATAAAGGAATCAGTGATTGTTTTGCTCGAACAGTCAAAGACGAAGGAATGCTTGCTCTTTGGAGAGGAAACACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTAAACTTTGCGTTCAAAGATTACTTCAAGAGGCTGTTTAACTTCAAGAAAGAAAAAGATGGCTACTGGAAGTGGTTTGCAGGGAACCTGGCGTCTGGTGGTGCAGCTGGTGCATCATCTCTGCTTTTTGTGTACTCTTTGGATTACGCTCGTACCCGTTTAGCCAATGATGCGAAGGCGGCCAAGAAAGGTGGTCAGCGGCAGTTTAATGGCATGGTCGACGTGTACAAGAAGACTATAGCCTCTGATGGCATTGTCGGGCTTTACCGTGGTTTCAACATCTCATGCGTTGGAATTGTCGTGTACCGGGGGCTTTACTTTGGATTGTATGATTCCTTGAAGCCTGTGGTTCTAGTTGATGGTCTCCAGGATAGCTTCCTTGCTAGTTTCTTACTGGGATGGGGAATCACCATTGGAGCTGGATTGGCGTCTTACCCAATTGACACGGTTCGCAGAAGAATGATGATGACGTCAGGTGAAGCAGTGAAGTACAAGAGCTCTCTTCAGGCCTTCTCTCAGATCGTCAAGAACGAAGGGGCCAAGTCACTCTTCAAGGGTGCAGGTGCCAACATCCTTCGTGCGGTTGCAGGCGCTGGTGTACTGGCCGGCTATGACAAGCTCCAGCTCATTGTGTTGGGTAAGAAGTATGGCTCTGGTGGTGGCTAA

Protein Analysis

379

Amino Acids

40.72

Weight (kDa)

9.78

Isoelectric Point (pI)

23.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 79 - 174 1.4e-25 Mitochondrial carrier protein
Mito_carr PF00153 182 - 274 2e-20 Mitochondrial carrier protein
Mito_carr PF00153 282 - 370 9.8e-18 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1025
AatII GACGTC 1 cut(s) 947
Acc36I ACCTGC 1 cut(s) 1025
AccB1I GGYRCC 1 cut(s) 1037
AccI GTMKAC 1 cut(s) 693
AccII CGCG 1 cut(s) 293
AciI CCGC 4 cut(s) 291, 653, 673, 1055
AclWI GGATC 1 cut(s) 16
AcoI YGGCCR 2 cut(s) 654, 1077
AcuI CTGAAG 1 cut(s) 962
AcyI GRCGYC 4 cut(s) 352, 566, 902, 944
AfaI GTAC 7 cut(s) 229, 608, 628, 701, 779, 965, 1074
AfiI CCNNNNNNNGG 3 cut(s) 371, 469, 1054
AflIII ACRYGT 1 cut(s) 696
AgsI TTSAA 6 cut(s) 490, 502, 520, 751, 814, 1027
AjiI CACGTC 1 cut(s) 697
AjnI CCWGG 2 cut(s) 561, 840
AjuI GAANNNNNNNTTGG 2 cut(s) 1007, 1039
Alw21I GWGCWC 1 cut(s) 974
Alw26I GTCTC 5 cut(s) 106, 174, 268, 359, 842
AlwI GGATC 1 cut(s) 16
AlwNI CAGNNNCTG 2 cut(s) 272, 1067
AoxI GGCC 4 cut(s) 654, 981, 1011, 1077
ApeKI GCWGC 4 cut(s) 142, 269, 287, 578
AspLEI GCGC 2 cut(s) 295, 1067
AspS9I GGNCC 1 cut(s) 1011
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 2 cut(s) 874, 962
AsuII TTCGAA 1 cut(s) 278
BaeI ACNNNNGTAYC 2 cut(s) 610, 643
BanI GGYRCC 1 cut(s) 1037
BanII GRGCYC 1 cut(s) 974
BauI CACGAG 1 cut(s) 87
BbsI GAAGAC 2 cut(s) 287, 713
Bbv12I GWGCWC 1 cut(s) 974
BbvI GCAGC 4 cut(s) 154, 256, 299, 590
BccI CCATC 5 cut(s) 28, 527, 716, 827, 867
BceAI ACGGC 1 cut(s) 300
BciT130I CCWGG 2 cut(s) 563, 842
BclI TGATCA 2 cut(s) 57, 339
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 5 cut(s) 106, 174, 268, 359, 842
BfaI CTAG 4 cut(s) 150, 213, 827, 858
BfmI CTRYAG 2 cut(s) 297, 711
BfoI RGCGCY 1 cut(s) 1068
BfuAI ACCTGC 1 cut(s) 1025
BisI GCNGC 7 cut(s) 143, 270, 288, 291, 579, 654, 674
BlsI GCNGC 7 cut(s) 144, 271, 289, 292, 580, 655, 675
Bme1390I CCNGG 3 cut(s) 563, 782, 842
BmgBI CACGTC 1 cut(s) 697
BmgT120I GGNCC 1 cut(s) 1011
BmiI GGNNCC 3 cut(s) 560, 1012, 1039
BmrFI CCNGG 3 cut(s) 563, 782, 842
BmrI ACTGGG 1 cut(s) 878
BmsI GCATC 3 cut(s) 25, 596, 634
BmuI ACTGGG 1 cut(s) 878
BpiI GAAGAC 2 cut(s) 287, 713
BpmI CTGGAG 2 cut(s) 824, 1079
Bpu14I TTCGAA 1 cut(s) 278
BpuMI CCSGG 1 cut(s) 782
Bsa29I ATCGAT 1 cut(s) 243
BsaHI GRCGYC 4 cut(s) 352, 566, 902, 944
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 3 cut(s) 154, 742, 781
Bsc4I CCNNNNNNNGG 3 cut(s) 371, 469, 1054
Bse118I RCCGGY 1 cut(s) 1079
Bse1I ACTGG 5 cut(s) 229, 235, 545, 873, 1080
BseBI CCWGG 2 cut(s) 563, 842
BseCI ATCGAT 1 cut(s) 243
BseDI CCNNGG 3 cut(s) 154, 742, 781
BseGI GGATG 4 cut(s) 10, 16, 878, 1044
BseLI CCNNNNNNNGG 3 cut(s) 371, 469, 1054
BseMII CTCAG 4 cut(s) 279, 351, 482, 1004
BseNI ACTGG 5 cut(s) 229, 235, 545, 873, 1080
BseRI GAGGAG 1 cut(s) 273
BseXI GCAGC 4 cut(s) 154, 256, 299, 590
BseYI CCCAGC 1 cut(s) 347
BsgI GTGCAG 2 cut(s) 597, 1053
Bsh1236I CGCG 1 cut(s) 293
BshFI GGCC 4 cut(s) 656, 983, 1013, 1079
BshNI GGYRCC 1 cut(s) 1037
BshVI ATCGAT 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 974
BsiSI CCGG 2 cut(s) 781, 1080
BslI CCNNNNNNNGG 3 cut(s) 371, 469, 1054
BsmAI GTCTC 5 cut(s) 106, 174, 268, 359, 842
BsmBI CGTCTC 2 cut(s) 174, 359
BsmI GAATGC 1 cut(s) 420
BsnI GGCC 4 cut(s) 656, 983, 1013, 1079
Bso31I GGTCTC 1 cut(s) 842
Bsp119I TTCGAA 1 cut(s) 278
Bsp1286I GDGCHC 1 cut(s) 974
Bsp1407I TGTACA 1 cut(s) 699
Bsp143I GATC 5 cut(s) 8, 57, 240, 339, 993
Bsp19I CCATGG 1 cut(s) 154
BspACI CCGC 4 cut(s) 291, 653, 673, 1055
BspANI GGCC 4 cut(s) 656, 983, 1013, 1079
BspCNI CTCAG 4 cut(s) 278, 352, 481, 1003
BspDI ATCGAT 1 cut(s) 243
BspFNI CGCG 1 cut(s) 293
BspLI GGNNCC 3 cut(s) 560, 1012, 1039
BspMI ACCTGC 1 cut(s) 1025
BspPI GGATC 1 cut(s) 16
BspT104I TTCGAA 1 cut(s) 278
BspT107I GGYRCC 1 cut(s) 1037
BspTNI GGTCTC 1 cut(s) 842
BsrFI RCCGGY 1 cut(s) 1079
BsrGI TGTACA 1 cut(s) 699
BsrI ACTGG 5 cut(s) 229, 235, 545, 873, 1080
BssAI RCCGGY 1 cut(s) 1079
BssECI CCNNGG 3 cut(s) 154, 742, 781
BssMI GATC 5 cut(s) 8, 57, 240, 339, 993
BssNI GRCGYC 4 cut(s) 352, 566, 902, 944
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 1 cut(s) 154
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 2 cut(s) 563, 842
Bst4CI ACNGT 4 cut(s) 98, 400, 743, 922
Bst6I CTCTTC 2 cut(s) 981, 1028
BstACI GRCGYC 4 cut(s) 352, 566, 902, 944
BstAPI GCANNNNNTGC 1 cut(s) 584
BstAUI TGTACA 1 cut(s) 699
BstBI TTCGAA 1 cut(s) 278
BstC8I GCNNGC 4 cut(s) 84, 420, 1063, 1081
BstDEI CTNAG 4 cut(s) 265, 360, 468, 990
BstDSI CCRYGG 2 cut(s) 154, 742
BstF5I GGATG 4 cut(s) 10, 16, 878, 1044
BstFNI CGCG 1 cut(s) 293
BstH2I RGCGCY 1 cut(s) 1068
BstHHI GCGC 2 cut(s) 295, 1067
BstKTI GATC 5 cut(s) 11, 60, 243, 342, 996
BstMAI GTCTC 5 cut(s) 106, 174, 268, 359, 842
BstMBI GATC 5 cut(s) 8, 57, 240, 339, 993
BstMWI GCNNNNNNNGC 6 cut(s) 301, 310, 584, 644, 653, 899
BstNI CCWGG 2 cut(s) 563, 842
BstSCI CCNGG 3 cut(s) 561, 780, 840
BstSFI CTRYAG 2 cut(s) 297, 711
BstUI CGCG 1 cut(s) 293
BstV1I GCAGC 4 cut(s) 154, 256, 299, 590
BstV2I GAAGAC 2 cut(s) 287, 713
BstXI CCANNNNNNTGG 1 cut(s) 161
Bsu15I ATCGAT 1 cut(s) 243
BsuRI GGCC 4 cut(s) 656, 983, 1013, 1079
BsuTUI ATCGAT 1 cut(s) 243
BtgI CCRYGG 2 cut(s) 154, 742
BtrI CACGTC 1 cut(s) 697
BtsCI GGATG 4 cut(s) 10, 16, 878, 1044
BtsI GCAGTG 2 cut(s) 438, 963
BtsIMutI CAGTG 3 cut(s) 385, 438, 963
BveI ACCTGC 1 cut(s) 1025
Cac8I GCNNGC 4 cut(s) 84, 420, 1063, 1081
CaiI CAGNNNCTG 2 cut(s) 272, 1067
CfoI GCGC 2 cut(s) 295, 1067
Cfr10I RCCGGY 1 cut(s) 1079
Cfr13I GGNCC 1 cut(s) 1011
ClaI ATCGAT 1 cut(s) 243
CseI GACGC 3 cut(s) 341, 555, 891
Csp6I GTAC 7 cut(s) 228, 607, 627, 700, 778, 964, 1073
CspCI CAANNNNNGTGG 2 cut(s) 646, 681
CviAII CATG 5 cut(s) 41, 155, 182, 688, 759
CviQI GTAC 7 cut(s) 228, 607, 627, 700, 778, 964, 1073
DdeI CTNAG 4 cut(s) 265, 360, 468, 990
DpnI GATC 5 cut(s) 10, 59, 242, 341, 995
DpnII GATC 5 cut(s) 8, 57, 240, 339, 993
DraI TTTAAA 1 cut(s) 477
EaeI YGGCCR 2 cut(s) 654, 1077
Eam1104I CTCTTC 2 cut(s) 981, 1028
EarI CTCTTC 2 cut(s) 981, 1028
Ecl136II GAGCTC 1 cut(s) 972
Eco130I CCWWGG 1 cut(s) 154
Eco147I AGGCCT 1 cut(s) 983
Eco24I GRGCYC 1 cut(s) 974
Eco31I GGTCTC 1 cut(s) 842
Eco53kI GAGCTC 1 cut(s) 972
Eco57I CTGAAG 1 cut(s) 962
EcoICRI GAGCTC 1 cut(s) 972
EcoRII CCWGG 2 cut(s) 561, 840
EcoT14I CCWWGG 1 cut(s) 154
EcoT38I GRGCYC 1 cut(s) 974
ErhI CCWWGG 1 cut(s) 154
Esp3I CGTCTC 2 cut(s) 174, 359
FaeI CATG 5 cut(s) 44, 158, 185, 691, 762
FalI AAGNNNNNCTT 4 cut(s) 402, 434, 1007, 1039
FatI CATG 5 cut(s) 40, 154, 181, 687, 758
FbaI TGATCA 2 cut(s) 57, 339
FblI GTMKAC 1 cut(s) 693
Fnu4HI GCNGC 7 cut(s) 143, 270, 288, 291, 579, 654, 674
FokI GGATG 4 cut(s) 3, 17, 885, 1031
FriOI GRGCYC 1 cut(s) 974
Fsp4HI GCNGC 7 cut(s) 143, 270, 288, 291, 579, 654, 674
FspBI CTAG 4 cut(s) 150, 213, 827, 858
GlaI GCGC 2 cut(s) 294, 1066
GluI GCNGC 7 cut(s) 143, 270, 288, 291, 579, 654, 674
GsaI CCCAGC 1 cut(s) 351
GsuI CTGGAG 2 cut(s) 824, 1079
HaeII RGCGCY 1 cut(s) 1068
HaeIII GGCC 4 cut(s) 656, 983, 1013, 1079
HapII CCGG 2 cut(s) 781, 1080
HgaI GACGC 3 cut(s) 341, 555, 891
HhaI GCGC 2 cut(s) 295, 1067
Hin1I GRCGYC 4 cut(s) 352, 566, 902, 944
Hin1II CATG 5 cut(s) 44, 158, 185, 691, 762
Hin6I GCGC 2 cut(s) 293, 1065
HinP1I GCGC 2 cut(s) 293, 1065
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 7 cut(s) 133, 261, 319, 325, 375, 806, 879
HpaII CCGG 2 cut(s) 781, 1080
HphI GGTGA 2 cut(s) 874, 962
Hpy166II GTNNAC 5 cut(s) 607, 694, 700, 778, 1073
Hpy188I TCNGA 7 cut(s) 33, 75, 324, 361, 455, 721, 993
Hpy188III TCNNGA 6 cut(s) 238, 316, 329, 502, 520, 1000
Hpy8I GTNNAC 5 cut(s) 607, 694, 700, 778, 1073
Hpy99I CGWCG 1 cut(s) 698
HpyAV CCTTC 5 cut(s) 404, 643, 994, 1001, 1058
HpyCH4III ACNGT 4 cut(s) 98, 400, 743, 922
HpyCH4IV ACGT 2 cut(s) 696, 944
HpyCH4V TGCA 8 cut(s) 82, 130, 142, 554, 578, 587, 1034, 1061
HpyF10VI GCNNNNNNNGC 6 cut(s) 301, 310, 584, 644, 653, 899
HpyF3I CTNAG 4 cut(s) 265, 360, 468, 990
HpySE526I ACGT 2 cut(s) 696, 944
Hsp92I GRCGYC 4 cut(s) 352, 566, 902, 944
Hsp92II CATG 5 cut(s) 44, 158, 185, 691, 762
HspAI GCGC 2 cut(s) 293, 1065
KroI GCCGGC 1 cut(s) 1079
KroNI GCCGGC 1 cut(s) 1081
Ksp22I TGATCA 2 cut(s) 57, 339
Kzo9I GATC 5 cut(s) 8, 57, 240, 339, 993
LmnI GCTCC 3 cut(s) 214, 890, 1098
Lsp1109I GCAGC 4 cut(s) 154, 256, 299, 590
LweI GCATC 3 cut(s) 25, 596, 634
MaeI CTAG 4 cut(s) 150, 213, 827, 858
MaeII ACGT 2 cut(s) 696, 944
MaeIII GTNAC 2 cut(s) 92, 1017
MalI GATC 5 cut(s) 10, 59, 242, 341, 995
MboI GATC 5 cut(s) 8, 57, 240, 339, 993
MboII GAAGA 5 cut(s) 292, 718, 942, 968, 1015
MfeI CAATTG 1 cut(s) 912
MhlI GDGCHC 1 cut(s) 974
MluCI AATT 2 cut(s) 768, 912
MlyI GAGTC 2 cut(s) 142, 270
MmeI TCCRAC 1 cut(s) 745
MnlI CCTC 6 cut(s) 116, 189, 251, 425, 498, 727
MroNI GCCGGC 1 cut(s) 1079
MseI TTAA 3 cut(s) 476, 513, 681
MspA1I CMGCKG 3 cut(s) 269, 581, 673
MspI CCGG 2 cut(s) 781, 1080
MspR9I CCNGG 3 cut(s) 563, 782, 842
MunI CAATTG 1 cut(s) 912
Mva1269I GAATGC 1 cut(s) 420
MvaI CCWGG 2 cut(s) 563, 842
MvnI CGCG 1 cut(s) 293
MwoI GCNNNNNNNGC 6 cut(s) 301, 310, 584, 644, 653, 899
NaeI GCCGGC 1 cut(s) 1081
NciI CCSGG 1 cut(s) 782
NcoI CCATGG 1 cut(s) 154
NdeII GATC 5 cut(s) 8, 57, 240, 339, 993
NgoMIV GCCGGC 1 cut(s) 1079
NlaIII CATG 5 cut(s) 44, 158, 185, 691, 762
NlaIV GGNNCC 3 cut(s) 560, 1012, 1039
NmuCI GTSAC 1 cut(s) 1017
NspV TTCGAA 1 cut(s) 278
PaqCI CACCTGC 1 cut(s) 1025
PceI AGGCCT 1 cut(s) 983
PcsI WCGNNNNNNNCGW 1 cut(s) 1002
PctI GAATGC 1 cut(s) 420
PdiI GCCGGC 1 cut(s) 1081
PfeI GAWTC 5 cut(s) 319, 325, 375, 806, 879
PfoI TCCNGGA 1 cut(s) 840
PkrI GCNGC 7 cut(s) 144, 271, 289, 292, 580, 655, 675
PleI GAGTC 2 cut(s) 141, 269
PpsI GAGTC 2 cut(s) 141, 269
Psp124BI GAGCTC 1 cut(s) 974
Psp6I CCWGG 2 cut(s) 561, 840
PspFI CCCAGC 1 cut(s) 347
PspGI CCWGG 2 cut(s) 561, 840
PspN4I GGNNCC 3 cut(s) 560, 1012, 1039
PspPI GGNCC 1 cut(s) 1011
PstNI CAGNNNCTG 2 cut(s) 272, 1067
PvuII CAGCTG 2 cut(s) 269, 581
RsaI GTAC 7 cut(s) 229, 608, 628, 701, 779, 965, 1074
RsaNI GTAC 7 cut(s) 228, 607, 627, 700, 778, 964, 1073
SacI GAGCTC 1 cut(s) 974
SalI GTCGAC 1 cut(s) 692
SaqAI TTAA 3 cut(s) 476, 513, 681
SatI GCNGC 7 cut(s) 143, 270, 288, 291, 579, 654, 674
Sau3AI GATC 5 cut(s) 8, 57, 240, 339, 993
Sau96I GGNCC 1 cut(s) 1011
SchI GAGTC 2 cut(s) 142, 270
ScrFI CCNGG 3 cut(s) 563, 782, 842
SduI GDGCHC 1 cut(s) 974
SfaNI GCATC 3 cut(s) 25, 596, 634
SfcI CTRYAG 2 cut(s) 297, 711
SfuI TTCGAA 1 cut(s) 278
Sse9I AATT 2 cut(s) 768, 912
SseBI AGGCCT 1 cut(s) 983
SsiI CCGC 4 cut(s) 291, 653, 673, 1055
SspMI CTAG 4 cut(s) 150, 213, 827, 858
SstI GAGCTC 1 cut(s) 974
StuI AGGCCT 1 cut(s) 983
StyD4I CCNGG 3 cut(s) 561, 780, 840
StyI CCWWGG 1 cut(s) 154
TaaI ACNGT 4 cut(s) 98, 400, 743, 922
TaiI ACGT 2 cut(s) 699, 947
TaqI TCGA 4 cut(s) 243, 278, 394, 693
TasI AATT 2 cut(s) 768, 912
TatI WGTACW 4 cut(s) 606, 699, 963, 1072
TauI GCSGC 3 cut(s) 293, 656, 676
TfiI GAWTC 5 cut(s) 319, 325, 375, 806, 879
Tru1I TTAA 3 cut(s) 476, 513, 681
Tru9I TTAA 3 cut(s) 476, 513, 681
TscAI CASTG 3 cut(s) 385, 445, 963
TseFI GTSAC 1 cut(s) 1017
TseI GCWGC 4 cut(s) 142, 269, 287, 578
Tsp45I GTSAC 1 cut(s) 1017
TspDTI ATGAA 2 cut(s) 177, 348
TspRI CASTG 3 cut(s) 385, 445, 963
XmiI GTMKAC 1 cut(s) 693
XspI CTAG 4 cut(s) 150, 213, 827, 858
ZraI GACGTC 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.