Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005453

Physical Location & Seq

Genomic Coordinates Reverse (-)

16289623 .. 16292916

Gene Structure 3294 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G33990.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGAAATTTGGAACCTTTTCACTTCCCAGACAAATTCCAACCTGCAAAGGTGGGCGCTTTACACGAGTTTTGCAATCTATCGGATCAGTTATTAGAGAATTTTCAGCATCTGCAAATGCTTTGCAAGACTGTTGGAAAAATGGGAATGAAAGTAAAGAGATTGATGATGTTCACACACTTTTCAGATATTGCACTAATTTGCAATCAGCCAAATGTCTCCACGCACGTCTCGTTGTCTCCAAACAAATCCAAAATGTTTGTATCTCTGCTAAACTTGTTAATCTCTATTGTTACCTTGGCAATGTCGCATTGGCTAGGCACACGTTTGATCATATCCAGAACAGAGATGTATACGCTTGGAATTTGATGATTTCTGGTTATGGCCGTGCGGGAAATTCTTCAGAAGTGATTAGGTGTTTTAGTCTCTTTATGTTGAGTTCTGGACTTACACCTGATTACAGGACTTTTCCTTCGGTTTTGAAAGCTTGTAGGACTGTGATTGATGGGAATAAGATTCATTGCTTGGCTTTGAAGTTTGGGTTTATGTGGGATGTCTATGTTGCTGCCTCGTTGATTCATTTGTACTCTCGATATAAAGCTGTGGGGAATGCACGTATACTGTTTGATGAAATGCCTGTAAGAGATATGGGTTCTTGGAATGCAATGATTTCTGGGTATTGTCAAAGCGGAAATGCTAAAGAGGCGTTAACTCTGTCTAATGGGTTGAGAGCTATGGATTCAGTTACCGTTGTGAGTCTCCTTTCGGCTTGCACTGAAGCCGGTGATTTCAATAGAGGAGTTACTATTCATTCATACTCGATAAAACATGGTCTGGAGTCCGAATTGTTTGTTTCCAACAAGCTGATTGATTTGTATGCTGAATTTGGTAGGCTTAGGGATTGCCAGAAGGTTTTTGATAGGATGTATGTGAGGGATTTGATTTCTTGGAATTCGATAATTAAGGCGTACGAGCTGAATGAGCAGCCGCTTAGAGCGATTTCGTTGTTTCAGGAGATGCGGTTGAGTAGAATTCAACCAGATTGCCTTACTTTGATTAGTTTGGCTTCTATACTATCACAGTTAGGGGACATTCGTGCTTGTAGATCTGTGCAGGGTTTCACTTTGAGGAAAGGCTGGTTCTTGGAAGATATTACCATCGGGAATGCTGTTGTGGTTATGTATGCAAAACTAGGCCTTGTAGATTCAGCAAGAGCAGTGTTTAATTGGCTTCCGAATACAGATGTTATTTCATGGAATACCATAATCTCGGGTTATGCTCAAAACGGTTTTGCTAGTGAAGCAATTGAAATGTATAACATAATGGAGGAAGAAGGTGAAATAGCCGCTAACCAAGGGACTTGGGTGAGTGTTTTGCCCGCTTGTTCGCAGGCTGGAGCGTTGCGTCAAGGTATGAAACTCCATGGCCGTCTCTTGAAGAACGGTCTTTATTTGGATGTTTTTGTTGTTACAAGCCTTGCTGATATGTATGGAAAGTGTGGACGACTAGAGGATGCCCTCTCTTTGTTTTATCAAATCCCAAGAGTCAACTCTGTGCCATGGAACACCCTAATAGCGTGTCACGGGTTTCACGGGCATGGCGAGAAAGCAGTGATGCTGTTCAAAGAAATGCTGGATGAAGGAGTGAAGCCAGATCACATTACATTTGTGACTCTGTTATCGGCTTGTAGCCATTCTGGGTTAGTAGACGAGGGTCAATGGTGCTTTGAGATGATGCAAACGGATTATGGGATAACACCGAGCTTGAAACATTACGGTTGTATGGTAGATATGTATGGTCGAGCTGGTCAGTTAGAAACCGCGTTGAAGTTTATAAAAAGTATGTCGCTTCAGCCTGATGCATCCATTTGGGGAGCTCTTCTCAGCGCTTGTAGAGTCCATGGGAATGTTGATCTTGGCAAGATCGCATCTGAACATTTGTTCGAGGTTGAACCTGAGCATGTCGGGTATCATGTTCTATTGTCAAACATGTATGCTAGTGCTGGAAAATGGGAAGGAGTTGATGAAATACGTTCAATAGCCCATGGCAAAGGTTTGAGGAAGACACCGGGTTGGAGCTCAATGGAAGTAGACAACAAAGTCGAAGTCTTTTACACGGGAAACCAAACGCATCCAATGTATGAAGAGATGTACAGAGAATTAACGGCATTACAAGCGAAACTGAAGATGATTGGGTATGTACCGGACCATAGATTTGTGTTGCAGGATGTTGAAGACGACGAGAAAGAGCATATCCTCATGAGTCATAGTGAAAGATTAGCTATTGCATTTGCACTTATCGCCACTCCTGCAAAGACAACGATTCGGATTTTTAAGAATCTAAGGGTATGCGGCGATTGCCATAGCGTAACCAAGTTCATATCGAAAATCACTGAGAGAGAGATCATTGTGAGGGATTCAAACCGGTTTCATCATTTCAAGAATGGAGTCTGCTCTTGCGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

823

Amino Acids

92.41

Weight (kDa)

7.3

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	407 - 450	3.7e-06	PPR repeat family
PPR	PF01535	409 - 438	1.5e-07	PPR repeat
PPR_2	PF13041	509 - 556	9.6e-13	PPR repeat family
PPR	PF01535	512 - 541	2.4e-06	PPR repeat
E_motif	PF20431	626 - 687	2.3e-12	E motif
DYW_deaminase	PF14432	724 - 816	3.3e-46	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33990 AT4G33990
fragaria_vesca	FvH4_2g05910
malus_domestica	MD05G1081900.v1.1
prunus_persica	Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1
pyrus_communis	pycom05g07680
rosa_chinensis	RchiOBHm_Chr2g0134891 RchiOBHm_Chr6g0257591
rosa_laevigata	RLG00000014704 RLG00000014708
rosa_multiflora	Rmu_sc0004702.1_g000004
rosa_roxburghii	Rroxscaffold_7G00208820
rosa_rugosa	Rorug02G0320700 Rorug05G0570400
rosa_samantha	Rh2AG373000 Rh2CG356900 Rh6AG087200 Rh6BG080500 Rh6CG075800 Rh6DG072600
rosa_wichuraiana	Rw2G030350 Rw6G007750 Rw6G007790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1832
AasI	GACNNNNNNGTC	1 cut(s)	2096
Acc36I	ACCTGC	1 cut(s)	50
AccI	GTMKAC	4 cut(s)	351, 616, 1704, 2088
AccII	CGCG	1 cut(s)	1820
AciI	CCGC	9 cut(s)	389, 687, 986, 1018, 1344, 1377, 1818, 2349, 2457
AclWI	GGATC	1 cut(s)	91
AcoI	YGGCCR	2 cut(s)	382, 1423
AcsI	RAATTY	8 cut(s)	5, 33, 98, 361, 394, 881, 949, 1029
AcuI	CTGAAG	4 cut(s)	384, 795, 1832, 2201
AfaI	GTAC	4 cut(s)	584, 968, 2150, 2199
AfeI	AGCGCT	1 cut(s)	1885
AflIII	ACRYGT	2 cut(s)	321, 1986
AgeI	ACCGGT	1 cut(s)	2421
AjiI	CACGTC	1 cut(s)	227
Alw21I	GWGCWC	2 cut(s)	1876, 2078
Alw26I	GTCTC	6 cut(s)	221, 233, 241, 428, 761, 1433
AlwI	GGATC	1 cut(s)	91
AlwNI	CAGNNNCTG	1 cut(s)	110
Ama87I	CYCGRG	1 cut(s)	1267
Aor51HI	AGCGCT	1 cut(s)	1885
AoxI	GGCC	3 cut(s)	382, 1192, 1423
ApeKI	GCWGC	2 cut(s)	563, 982
ApoI	RAATTY	8 cut(s)	5, 33, 98, 361, 394, 881, 949, 1029
ArsI	GACNNNNNNTTYG	6 cut(s)	454, 486, 2088, 2120, 2195, 2227
AsiGI	ACCGGT	1 cut(s)	2421
Asp700I	GAANNNNTTC	2 cut(s)	16, 397
AspLEI	GCGC	2 cut(s)	57, 1886
AspS9I	GGNCC	1 cut(s)	2203
AsuC2I	CCSGG	1 cut(s)	2067
AsuHPI	GGTGA	4 cut(s)	794, 1346, 1375, 2471
AvaI	CYCGRG	1 cut(s)	1267
AvaII	GGWCC	1 cut(s)	2203
BanII	GRGCYC	2 cut(s)	1876, 2078
BauI	CACGAG	1 cut(s)	63
BbsI	GAAGAC	2 cut(s)	2066, 2238
Bbv12I	GWGCWC	2 cut(s)	1876, 2078
BbvI	GCAGC	2 cut(s)	550, 994
BccI	CCATC	2 cut(s)	497, 1163
BceAI	ACGGC	3 cut(s)	369, 1410, 2178
BclI	TGATCA	1 cut(s)	328
BcnI	CCSGG	1 cut(s)	2067
BcoDI	GTCTC	6 cut(s)	221, 233, 241, 428, 761, 1433
BfaI	CTAG	5 cut(s)	315, 1190, 1293, 1505, 1995
BfoI	RGCGCY	2 cut(s)	58, 1887
BfuAI	ACCTGC	1 cut(s)	50
BglII	AGATCT	1 cut(s)	1103
BisI	GCNGC	5 cut(s)	564, 983, 986, 1344, 2350
BlsI	GCNGC	5 cut(s)	565, 984, 987, 1345, 2351
Bme1390I	CCNGG	1 cut(s)	2067
Bme18I	GGWCC	1 cut(s)	2203
BmeT110I	CYCGRG	1 cut(s)	1267
BmgBI	CACGTC	1 cut(s)	227
BmgT120I	GGNCC	1 cut(s)	2203
BmiI	GGNNCC	1 cut(s)	13
BmrFI	CCNGG	1 cut(s)	2067
BmsI	GCATC	9 cut(s)	116, 1005, 1501, 1602, 1722, 1846, 1868, 1934, 2137
BoxI	GACNNNNGTC	1 cut(s)	1710
BpiI	GAAGAC	2 cut(s)	2066, 2238
BplI	GAGNNNNNCTC	2 cut(s)	1863, 1895
BpmI	CTGGAG	2 cut(s)	854, 1413
Bpu10I	CCTNAGC	2 cut(s)	893, 1953
BpuMI	CCSGG	1 cut(s)	2067
BsaAI	YACGTR	1 cut(s)	614
BsaJI	CCNNGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
BsaWI	WCCGGW	2 cut(s)	2200, 2421
BsaXI	ACNNNNNCTCC	2 cut(s)	1004, 1034
Bse118I	RCCGGY	2 cut(s)	779, 2421
Bse1I	ACTGG	1 cut(s)	2471
Bse3DI	GCAATG	3 cut(s)	307, 517, 669
BseDI	CCNNGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
BseGI	GGATG	8 cut(s)	556, 927, 1459, 1516, 1639, 1859, 2128, 2230
BseMI	GCAATG	3 cut(s)	307, 517, 669
BseMII	CTCAG	3 cut(s)	1894, 1944, 2382
BseNI	ACTGG	1 cut(s)	2471
BseRI	GAGGAG	1 cut(s)	810
BseXI	GCAGC	2 cut(s)	550, 994
BsgI	GTGCAG	1 cut(s)	1130
Bsh1236I	CGCG	1 cut(s)	1820
BshFI	GGCC	3 cut(s)	384, 1194, 1425
BshTI	ACCGGT	1 cut(s)	2421
BsiHKAI	GWGCWC	2 cut(s)	1876, 2078
BsiHKCI	CYCGRG	1 cut(s)	1267
BsiSI	CCGG	4 cut(s)	780, 2066, 2201, 2422
BsiWI	CGTACG	1 cut(s)	966
BslFI	GGGAC	2 cut(s)	1100, 1369
BsmAI	GTCTC	6 cut(s)	221, 233, 241, 428, 761, 1433
BsmBI	CGTCTC	2 cut(s)	233, 1433
BsmFI	GGGAC	2 cut(s)	1100, 1369
BsmI	GAATGC	3 cut(s)	613, 664, 1168
BsnI	GGCC	3 cut(s)	384, 1194, 1425
BsoBI	CYCGRG	1 cut(s)	1267
Bsp1286I	GDGCHC	2 cut(s)	1876, 2078
Bsp1407I	TGTACA	1 cut(s)	2148
Bsp143I	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
Bsp19I	CCATGG	4 cut(s)	1420, 1556, 1897, 2041
BspACI	CCGC	9 cut(s)	389, 687, 986, 1018, 1344, 1377, 1818, 2349, 2457
BspANI	GGCC	3 cut(s)	384, 1194, 1425
BspCNI	CTCAG	3 cut(s)	1893, 1945, 2383
BspFNI	CGCG	1 cut(s)	1820
BspHI	TCATGA	1 cut(s)	2256
BspLI	GGNNCC	1 cut(s)	13
BspMI	ACCTGC	1 cut(s)	50
BspPI	GGATC	1 cut(s)	91
BspQI	GCTCTTC	1 cut(s)	1881
BsrDI	GCAATG	3 cut(s)	307, 517, 669
BsrFI	RCCGGY	2 cut(s)	779, 2421
BsrGI	TGTACA	1 cut(s)	2148
BsrI	ACTGG	1 cut(s)	2471
BssAI	RCCGGY	2 cut(s)	779, 2421
BssECI	CCNNGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
BssMI	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
BssNAI	GTATAC	2 cut(s)	352, 617
BssSI	CACGAG	1 cut(s)	63
BssT1I	CCWWGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
Bst1107I	GTATAC	2 cut(s)	352, 617
Bst2BI	CACGAG	1 cut(s)	63
Bst4CI	ACNGT	8 cut(s)	131, 496, 621, 748, 1080, 1286, 1442, 1775
Bst6I	CTCTTC	2 cut(s)	1881, 2136
BstAUI	TGTACA	1 cut(s)	2148
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	3 cut(s)	769, 1377, 1389
BstDEI	CTNAG	6 cut(s)	893, 989, 1880, 1953, 2339, 2391
BstDSI	CCRYGG	4 cut(s)	1420, 1556, 1897, 2041
BstF5I	GGATG	8 cut(s)	556, 927, 1459, 1516, 1639, 1859, 2128, 2230
BstFNI	CGCG	1 cut(s)	1820
BstH2I	RGCGCY	2 cut(s)	58, 1887
BstHHI	GCGC	2 cut(s)	57, 1886
BstKTI	GATC	7 cut(s)	86, 331, 1106, 1654, 1912, 1923, 2403
BstMAI	GTCTC	6 cut(s)	221, 233, 241, 428, 761, 1433
BstMBI	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
BstMWI	GCNNNNNNNGC	7 cut(s)	701, 979, 1298, 2171, 2297, 2306, 2355
BstNSI	RCATGY	2 cut(s)	1961, 1990
BstPAI	GACNNNNGTC	1 cut(s)	1710
BstSCI	CCNGG	1 cut(s)	2065
BstUI	CGCG	1 cut(s)	1820
BstV1I	GCAGC	2 cut(s)	550, 994
BstV2I	GAAGAC	2 cut(s)	2066, 2238
BstX2I	RGATCY	1 cut(s)	1103
BstYI	RGATCY	1 cut(s)	1103
BstZ17I	GTATAC	2 cut(s)	352, 617
BsuRI	GGCC	3 cut(s)	384, 1194, 1425
BtgI	CCRYGG	4 cut(s)	1420, 1556, 1897, 2041
BtrI	CACGTC	1 cut(s)	227
BtsCI	GGATG	8 cut(s)	556, 927, 1459, 1516, 1639, 1859, 2128, 2230
BtsI	GCAGTG	2 cut(s)	1221, 1614
BtsIMutI	CAGTG	4 cut(s)	771, 1221, 1614, 2388
BveI	ACCTGC	1 cut(s)	50
Cac8I	GCNNGC	3 cut(s)	769, 1377, 1389
CaiI	CAGNNNCTG	1 cut(s)	110
CciI	TCATGA	1 cut(s)	2256
CfoI	GCGC	2 cut(s)	57, 1886
Cfr10I	RCCGGY	2 cut(s)	779, 2421
Cfr13I	GGNCC	1 cut(s)	2203
CseI	GACGC	1 cut(s)	1391
Csp6I	GTAC	4 cut(s)	583, 967, 2149, 2198
CspAI	ACCGGT	1 cut(s)	2421
CviQI	GTAC	4 cut(s)	583, 967, 2149, 2198
DdeI	CTNAG	6 cut(s)	893, 989, 1880, 1953, 2339, 2391
DpnI	GATC	7 cut(s)	85, 330, 1105, 1653, 1911, 1922, 2402
DpnII	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
DrdI	GACNNNNNNGTC	1 cut(s)	2096
DseDI	GACNNNNNNGTC	1 cut(s)	2096
EaeI	YGGCCR	2 cut(s)	382, 1423
Eam1104I	CTCTTC	2 cut(s)	1881, 2136
EarI	CTCTTC	2 cut(s)	1881, 2136
Ecl136II	GAGCTC	2 cut(s)	1874, 2076
Eco130I	CCWWGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
Eco147I	AGGCCT	1 cut(s)	1194
Eco24I	GRGCYC	2 cut(s)	1876, 2078
Eco47I	GGWCC	1 cut(s)	2203
Eco47III	AGCGCT	1 cut(s)	1885
Eco53kI	GAGCTC	2 cut(s)	1874, 2076
Eco57I	CTGAAG	4 cut(s)	384, 795, 1832, 2201
Eco88I	CYCGRG	1 cut(s)	1267
EcoICRI	GAGCTC	2 cut(s)	1874, 2076
EcoRI	GAATTC	2 cut(s)	949, 1029
EcoT14I	CCWWGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
EcoT22I	ATGCAT	1 cut(s)	1861
EcoT38I	GRGCYC	2 cut(s)	1876, 2078
ErhI	CCWWGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
Esp3I	CGTCTC	2 cut(s)	233, 1433
FaqI	GGGAC	2 cut(s)	1100, 1369
FauI	CCCGC	2 cut(s)	382, 1384
FbaI	TGATCA	1 cut(s)	328
FblI	GTMKAC	4 cut(s)	351, 616, 1704, 2088
Fnu4HI	GCNGC	5 cut(s)	564, 983, 986, 1344, 2350
FokI	GGATG	8 cut(s)	563, 934, 1466, 1523, 1646, 1846, 2115, 2237
FriOI	GRGCYC	2 cut(s)	1876, 2078
Fsp4HI	GCNGC	5 cut(s)	564, 983, 986, 1344, 2350
FspBI	CTAG	5 cut(s)	315, 1190, 1293, 1505, 1995
GlaI	GCGC	2 cut(s)	56, 1885
GluI	GCNGC	5 cut(s)	564, 983, 986, 1344, 2350
GsuI	CTGGAG	2 cut(s)	854, 1413
HaeII	RGCGCY	2 cut(s)	58, 1887
HaeIII	GGCC	3 cut(s)	384, 1194, 1425
HapII	CCGG	4 cut(s)	780, 2066, 2201, 2422
HgaI	GACGC	1 cut(s)	1391
HhaI	GCGC	2 cut(s)	57, 1886
Hin6I	GCGC	2 cut(s)	55, 1884
HinP1I	GCGC	2 cut(s)	55, 1884
HincII	GTYRAC	2 cut(s)	708, 1546
HindII	GTYRAC	2 cut(s)	708, 1546
HindIII	AAGCTT	1 cut(s)	483
HpaI	GTTAAC	1 cut(s)	708
HpaII	CCGG	4 cut(s)	780, 2066, 2201, 2422
HphI	GGTGA	4 cut(s)	794, 1346, 1375, 2471
Hpy166II	GTNNAC	8 cut(s)	172, 352, 617, 708, 1499, 1546, 1705, 2089
Hpy188I	TCNGA	7 cut(s)	83, 185, 403, 841, 1233, 1930, 2325
Hpy188III	TCNNGA	9 cut(s)	337, 441, 588, 833, 1010, 1159, 1432, 2257, 2437
Hpy8I	GTNNAC	8 cut(s)	172, 352, 617, 708, 1499, 1546, 1705, 2089
Hpy99I	CGWCG	1 cut(s)	2240
HpyAV	CCTTC	5 cut(s)	480, 901, 1325, 1631, 2006
HpyCH4III	ACNGT	8 cut(s)	131, 496, 621, 748, 1080, 1286, 1442, 1775
HpyCH4IV	ACGT	4 cut(s)	226, 323, 613, 2029
HpyF10VI	GCNNNNNNNGC	7 cut(s)	701, 979, 1298, 2171, 2297, 2306, 2355
HpyF3I	CTNAG	6 cut(s)	893, 989, 1880, 1953, 2339, 2391
HpySE526I	ACGT	4 cut(s)	226, 323, 613, 2029
HspAI	GCGC	2 cut(s)	55, 1884
Ksp22I	TGATCA	1 cut(s)	328
KspAI	GTTAAC	1 cut(s)	708
Kzo9I	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
LguI	GCTCTTC	1 cut(s)	1881
LmnI	GCTCC	3 cut(s)	1394, 1871, 2073
Lsp1109I	GCAGC	2 cut(s)	550, 994
LweI	GCATC	9 cut(s)	116, 1005, 1501, 1602, 1722, 1846, 1868, 1934, 2137
MaeI	CTAG	5 cut(s)	315, 1190, 1293, 1505, 1995
MaeII	ACGT	4 cut(s)	226, 323, 613, 2029
MaeIII	GTNAC	7 cut(s)	290, 742, 799, 1465, 1577, 1666, 2365
MalI	GATC	7 cut(s)	85, 330, 1105, 1653, 1911, 1922, 2402
MboI	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
MboII	GAAGA	9 cut(s)	390, 1157, 1340, 1447, 1868, 2071, 2153, 2194, 2243
MfeI	CAATTG	1 cut(s)	1302
MflI	RGATCY	1 cut(s)	1103
MhlI	GDGCHC	2 cut(s)	1876, 2078
MlyI	GAGTC	7 cut(s)	763, 845, 1551, 1663, 1902, 2269, 2454
MmeI	TCCRAC	4 cut(s)	62, 113, 879, 2051
Mph1103I	ATGCAT	1 cut(s)	1861
MroXI	GAANNNNTTC	2 cut(s)	16, 397
MseI	TTAA	6 cut(s)	279, 707, 960, 1221, 2159, 2331
MslI	CAYNNNNRTG	2 cut(s)	1593, 1902
MspI	CCGG	4 cut(s)	780, 2066, 2201, 2422
MspR9I	CCNGG	1 cut(s)	2067
MunI	CAATTG	1 cut(s)	1302
Mva1269I	GAATGC	3 cut(s)	613, 664, 1168
MvnI	CGCG	1 cut(s)	1820
MwoI	GCNNNNNNNGC	7 cut(s)	701, 979, 1298, 2171, 2297, 2306, 2355
NciI	CCSGG	1 cut(s)	2067
NcoI	CCATGG	4 cut(s)	1420, 1556, 1897, 2041
NdeII	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
NlaIV	GGNNCC	1 cut(s)	13
NmuCI	GTSAC	2 cut(s)	1577, 1666
NsiI	ATGCAT	1 cut(s)	1861
NspI	RCATGY	2 cut(s)	1961, 1990
PagI	TCATGA	1 cut(s)	2256
PceI	AGGCCT	1 cut(s)	1194
PciI	ACATGT	1 cut(s)	1986
PciSI	GCTCTTC	1 cut(s)	1881
PcsI	WCGNNNNNNNCGW	2 cut(s)	228, 1596
PctI	GAATGC	3 cut(s)	613, 664, 1168
PdmI	GAANNNNTTC	2 cut(s)	16, 397
PfeI	GAWTC	7 cut(s)	514, 574, 737, 1202, 2320, 2335, 2414
Pfl23II	CGTACG	1 cut(s)	966
PinAI	ACCGGT	1 cut(s)	2421
PkrI	GCNGC	5 cut(s)	565, 984, 987, 1345, 2351
PleI	GAGTC	7 cut(s)	762, 844, 1550, 1663, 1901, 2268, 2453
PpsI	GAGTC	7 cut(s)	762, 844, 1550, 1663, 1901, 2268, 2453
Ppu21I	YACGTR	1 cut(s)	614
PscI	ACATGT	1 cut(s)	1986
PshAI	GACNNNNGTC	1 cut(s)	1710
PsiI	TTATAA	1 cut(s)	1832
Psp124BI	GAGCTC	2 cut(s)	1876, 2078
PspLI	CGTACG	1 cut(s)	966
PspN4I	GGNNCC	1 cut(s)	13
PspPI	GGNCC	1 cut(s)	2203
PstNI	CAGNNNCTG	1 cut(s)	110
PsuI	RGATCY	1 cut(s)	1103
RsaI	GTAC	4 cut(s)	584, 968, 2150, 2199
RsaNI	GTAC	4 cut(s)	583, 967, 2149, 2198
RseI	CAYNNNNRTG	2 cut(s)	1593, 1902
SacI	GAGCTC	2 cut(s)	1876, 2078
SapI	GCTCTTC	1 cut(s)	1881
SaqAI	TTAA	6 cut(s)	279, 707, 960, 1221, 2159, 2331
SatI	GCNGC	5 cut(s)	564, 983, 986, 1344, 2350
Sau3AI	GATC	7 cut(s)	83, 328, 1103, 1651, 1909, 1920, 2400
Sau96I	GGNCC	1 cut(s)	2203
SchI	GAGTC	7 cut(s)	763, 845, 1551, 1663, 1902, 2269, 2454
ScrFI	CCNGG	1 cut(s)	2067
SduI	GDGCHC	2 cut(s)	1876, 2078
SfaNI	GCATC	9 cut(s)	116, 1005, 1501, 1602, 1722, 1846, 1868, 1934, 2137
SinI	GGWCC	1 cut(s)	2203
SmiMI	CAYNNNNRTG	2 cut(s)	1593, 1902
SseBI	AGGCCT	1 cut(s)	1194
SsiI	CCGC	9 cut(s)	389, 687, 986, 1018, 1344, 1377, 1818, 2349, 2457
SspMI	CTAG	5 cut(s)	315, 1190, 1293, 1505, 1995
SstI	GAGCTC	2 cut(s)	1876, 2078
StuI	AGGCCT	1 cut(s)	1194
StyD4I	CCNGG	1 cut(s)	2065
StyI	CCWWGG	6 cut(s)	295, 1351, 1420, 1556, 1897, 2041
TaaI	ACNGT	8 cut(s)	131, 496, 621, 748, 1080, 1286, 1442, 1775
TaiI	ACGT	4 cut(s)	229, 326, 616, 2032
TaqI	TCGA	7 cut(s)	589, 818, 953, 1798, 1941, 2100, 2381
TatI	WGTACW	2 cut(s)	582, 2148
TauI	GCSGC	3 cut(s)	988, 1346, 2352
TfiI	GAWTC	7 cut(s)	514, 574, 737, 1202, 2320, 2335, 2414
Tru1I	TTAA	6 cut(s)	279, 707, 960, 1221, 2159, 2331
Tru9I	TTAA	6 cut(s)	279, 707, 960, 1221, 2159, 2331
TscAI	CASTG	4 cut(s)	778, 1221, 1614, 2395
TseFI	GTSAC	2 cut(s)	1577, 1666
TseI	GCWGC	2 cut(s)	563, 982
Tsp45I	GTSAC	2 cut(s)	1577, 1666
TspGWI	ACGGA	1 cut(s)	1754
TspRI	CASTG	4 cut(s)	778, 1221, 1614, 2395
VpaK11BI	GGWCC	1 cut(s)	2203
XapI	RAATTY	8 cut(s)	5, 33, 98, 361, 394, 881, 949, 1029
XceI	RCATGY	2 cut(s)	1961, 1990
XmiI	GTMKAC	4 cut(s)	351, 616, 1704, 2088
XmnI	GAANNNNTTC	2 cut(s)	16, 397
XspI	CTAG	5 cut(s)	315, 1190, 1293, 1505, 1995
Zsp2I	ATGCAT	1 cut(s)	1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.