Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004702.1

Orthogroup ID

OG0005453

Physical Location & Seq

Genomic Coordinates Forward (+)

11933 .. 14707

Gene Structure 2775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004702.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

atgcctagaaaggatgtctatacctggaattcaatggtgtctgcatatgttcgcagtggacgtttccgagaagctgtagactgtttctctcattttttgttgacccctggtctgcgacctgatttctacacttttcctcctgtcttgaaagcgtgtgggaatctaaatgttgggaagaagatacactgttggcttataaagctgggtttggaatgggatgtctttgtggctgcttccttgatccatatgtattcacggtttggatttattagcattgctcgtaaattgtttgatgagatgccattccgggatatgggttgttggaatgcaatgatttctgggttttgtcagaatgggaatgcagcagatgcattagatgtcttgattgaaatgagatcggagggtgtaaagatggatcctgtaactgttgcaagtctactgactgcttgtgcacaatcagatgattccttaagcgggatgctgattcatttgtatgtcataaagcatggactagagtttgatctgtttgtatgcaatgccttgattaacatgtatgctaaatttggttgcttgggacatgcacagagggttttttatgaaatgcaggtaagagatttggtgtcatggaactcaataattgctgcaaatgagcagaatgatgagccgatgactgcacttggattcttcaacaggatgcaactatccagagttaagcctgattggctgacattagtgagtttggcttccattatagctcaattaagtgatgctgaaatgagtagcgctgttcatggattcattttgaggagagattggttcaaggaagatgttgttattggaaatgcagttgtggacatgtatgcaaagttgggtgctatagattctgcacgtactgtttttgaaggacttcctgtcaaggatgtggtttcatggaatactttgatcacaggttacacccaaaatggtcttgcaagtgaggcgaatgaagtgtactgtatgatgcaagagtgcaaagaaataattccaaaccaaggaacttgggttagcattctaccagcatatacccatttaggggccttgcaacaagggatgagaattcatgggcgggtgatcaagaaccgtctctacgtggatgtatttgtgggtacctgcttgattgacatgtatggaaaatgtgggagactagatgatgcattatcgttattctacgaagtgcccagaatgagttcagtcacttggaatgccatgatttcctgtcttggagttcatgggcatggtgggaaagctgtgaagctattcaaagatatgatagatgagggggttaagccagatcatgtaacctttgtatctctaatggcagcttgtagtcattcaggtatggtcaatgagggtgaattgtactttcatatgatgcagaaagagtatggaatcaagcctggtttaaagcactatggctgtatggtagatttacttggcagagctgggcatttagacaaggcatatagttttattaagactatgcctgtacagcctgatgcttctgtttggggggcactacttggtgcgtgtagaatacatgggaatgctgaattggggaaaattgcttcagaaggcttgtttgaagttgattcggagaatgtgggctactatgttttgttgtcaaatatatatgcaacaaccgggaaatgggaaggtgtggataaagtgagatctatggctagaaaccggggactgaggaagactcccgggtggagctcaatagaagttaacaataaagttgatgtcttttatactgggaaccaaacacatccattatgcgaacagatataccagaagctgagggaactaactgagaaaatgaagagccttggttatgttccagacttcagctttgtgttgcaggatgtcgaggatgacgagaaagagcatatcctcaccagtcatagtgagagattggcgattgcttttggaatcattagcacgcctcctaaaactcccattcggatcttcaagaacctgagggtttgcggcgattgccacaatgtgacgaaactcatatcagtaataacggagagggatatcattgaaatcgacgaagctgcgtacaatagtggcgagttcatggcagaccctcacgcaccaccgcctcgacctctccacaagcagaactcctggtcgccggacatactctgtgaggagacatggcagcgtcagaaggccagtggctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

742

Amino Acids

83.2

Weight (kDa)

6.17

Isoelectric Point (pI)

36.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33990 AT4G33990
fragaria_vesca	FvH4_2g05910
malus_domestica	MD05G1081900.v1.1
prunus_persica	Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1
pyrus_communis	pycom05g07680
rosa_chinensis	RchiOBHm_Chr2g0134891 RchiOBHm_Chr6g0257591
rosa_laevigata	RLG00000014704 RLG00000014708
rosa_multiflora	Rmu_sc0004702.1_g000004
rosa_roxburghii	Rroxscaffold_7G00208820
rosa_rugosa	Rorug02G0320700 Rorug05G0570400
rosa_samantha	Rh2AG373000 Rh2CG356900 Rh6AG087200 Rh6BG080500 Rh6CG075800 Rh6DG072600
rosa_wichuraiana	Rw2G030350 Rw6G007750 Rw6G007790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	197
Acc36I	ACCTGC	2 cut(s)	595, 1157
Acc65I	GGTACC	1 cut(s)	1145
AccB1I	GGYRCC	1 cut(s)	1145
AccI	GTMKAC	2 cut(s)	78, 436
AciI	CCGC	4 cut(s)	474, 1105, 2028, 2144
AclWI	GGATC	4 cut(s)	235, 410, 423, 2012
AcsI	RAATTY	3 cut(s)	28, 560, 1095
AcuI	CTGAAG	2 cut(s)	1590, 1870
AdeI	CACNNNGTG	1 cut(s)	2044
AfaI	GTAC	6 cut(s)	892, 992, 1147, 1400, 1527, 2105
AfeI	AGCGCT	1 cut(s)	784
AfiI	CCNNNNNNNGG	6 cut(s)	313, 474, 1031, 1071, 1072, 1686
AflII	CTTAAG	1 cut(s)	469
AflIII	ACRYGT	3 cut(s)	549, 855, 1161
AhdI	GACNNNNNGTC	2 cut(s)	108, 911
AjnI	CCWGG	4 cut(s)	23, 106, 1435, 2171
AjuI	GAANNNNNNNTTGG	2 cut(s)	1574, 1606
Alw21I	GWGCWC	2 cut(s)	454, 1757
Alw26I	GTCTC	3 cut(s)	1127, 1174, 2192
Alw44I	GTGCAC	1 cut(s)	450
AlwI	GGATC	4 cut(s)	235, 410, 423, 2012
AlwNI	CAGNNNCTG	2 cut(s)	1837, 2226
Ama87I	CYCGRG	1 cut(s)	1745
Aor51HI	AGCGCT	1 cut(s)	784
AoxI	GGCC	2 cut(s)	1074, 2217
ApaLI	GTGCAC	1 cut(s)	450
ApeKI	GCWGC	6 cut(s)	230, 362, 641, 1358, 2099, 2206
ApoI	RAATTY	3 cut(s)	28, 560, 1095
ArsI	GACNNNNNNTTYG	2 cut(s)	1874, 1906
Asp700I	GAANNNNTTC	4 cut(s)	906, 1020, 1225, 1295
Asp718I	GGTACC	1 cut(s)	1145
AspLEI	GCGC	1 cut(s)	785
AspS9I	GGNCC	1 cut(s)	1074
AsuC2I	CCSGG	5 cut(s)	308, 1681, 1727, 1746, 1747
AsuHPI	GGTGA	3 cut(s)	1120, 1403, 1927
AvaI	CYCGRG	1 cut(s)	1745
AxyI	CCTNAGG	1 cut(s)	2018
BaeGI	GKGCMC	3 cut(s)	454, 1218, 1555
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BamHI	GGATCC	1 cut(s)	415
BanI	GGYRCC	1 cut(s)	1145
BanII	GRGCYC	1 cut(s)	1757
BbsI	GAAGAC	1 cut(s)	1745
Bbv12I	GWGCWC	2 cut(s)	454, 1757
BbvCI	CCTCAGC	1 cut(s)	1838
BbvI	GCAGC	6 cut(s)	217, 374, 628, 1370, 2086, 2218
BccI	CCATC	1 cut(s)	406
BcgI	CGANNNNNNTGC	2 cut(s)	2081, 2115
BciT130I	CCWGG	4 cut(s)	25, 108, 1437, 2173
BclI	TGATCA	2 cut(s)	942, 1110
BcnI	CCSGG	5 cut(s)	308, 1681, 1727, 1746, 1747
BcoDI	GTCTC	3 cut(s)	1127, 1174, 2192
BfaI	CTAG	4 cut(s)	6, 512, 1184, 1719
BfmI	CTRYAG	2 cut(s)	75, 876
BfoI	RGCGCY	1 cut(s)	786
BfrI	CTTAAG	1 cut(s)	469
BfuAI	ACCTGC	2 cut(s)	595, 1157
BglI	GCCNNNNNGGC	1 cut(s)	721
BglII	AGATCT	1 cut(s)	1709
BisI	GCNGC	7 cut(s)	231, 363, 642, 1359, 2029, 2100, 2207
BlsI	GCNGC	7 cut(s)	232, 364, 643, 1360, 2030, 2101, 2208
Bme1390I	CCNGG	9 cut(s)	25, 108, 308, 1437, 1681, 1727, 1746, 1747, 2173
BmeRI	GACNNNNNGTC	2 cut(s)	108, 911
BmeT110I	CYCGRG	1 cut(s)	1745
BmgT120I	GGNCC	1 cut(s)	1074
BmiI	GGNNCC	4 cut(s)	417, 1075, 1147, 1799
BmrFI	CCNGG	9 cut(s)	25, 108, 308, 1437, 1681, 1727, 1746, 1747, 2173
BmrI	ACTGGG	1 cut(s)	1803
BmsI	GCATC	9 cut(s)	288, 358, 468, 684, 757, 990, 1180, 1401, 1525
BmuI	ACTGGG	1 cut(s)	1803
BpiI	GAAGAC	1 cut(s)	1745
BplI	GAGNNNNNCTC	2 cut(s)	1726, 1758
Bpu10I	CCTNAGC	1 cut(s)	1838
BpuMI	CCSGG	5 cut(s)	308, 1681, 1727, 1746, 1747
BsaAI	YACGTR	2 cut(s)	890, 1129
BsaJI	CCNNGG	5 cut(s)	106, 1030, 1726, 1745, 1867
BsaXI	ACNNNNNCTCC	2 cut(s)	121, 151
Bsc4I	CCNNNNNNNGG	6 cut(s)	313, 474, 1031, 1071, 1072, 1686
Bse1I	ACTGG	3 cut(s)	1798, 1938, 2220
Bse21I	CCTNAGG	1 cut(s)	2018
Bse3DI	GCAATG	3 cut(s)	273, 336, 541
BseBI	CCWGG	4 cut(s)	25, 108, 1437, 2173
BseDI	CCNNGG	5 cut(s)	106, 1030, 1726, 1745, 1867
BseLI	CCNNNNNNNGG	6 cut(s)	313, 474, 1031, 1071, 1072, 1686
BseMI	GCAATG	3 cut(s)	273, 336, 541
BseMII	CTCAG	4 cut(s)	1724, 1829, 1842, 2009
BseNI	ACTGG	3 cut(s)	1798, 1938, 2220
BseRI	GAGGAG	2 cut(s)	820, 2210
BseSI	GKGCMC	3 cut(s)	454, 1218, 1555
BseXI	GCAGC	6 cut(s)	217, 374, 628, 1370, 2086, 2218
BseYI	CCCAGC	2 cut(s)	202, 1481
BsgI	GTGCAG	2 cut(s)	657, 870
BshFI	GGCC	2 cut(s)	1076, 2219
BshNI	GGYRCC	1 cut(s)	1145
BsiHKAI	GWGCWC	2 cut(s)	454, 1757
BsiHKCI	CYCGRG	1 cut(s)	1745
BsiSI	CCGG	5 cut(s)	307, 1680, 1726, 1746, 2180
BslFI	GGGAC	2 cut(s)	588, 1743
BslI	CCNNNNNNNGG	6 cut(s)	313, 474, 1031, 1071, 1072, 1686
BsmAI	GTCTC	3 cut(s)	1127, 1174, 2192
BsmBI	CGTCTC	1 cut(s)	1127
BsmFI	GGGAC	2 cut(s)	588, 1743
BsmI	GAATGC	5 cut(s)	331, 364, 1047, 1246, 1588
BsnI	GGCC	2 cut(s)	1076, 2219
BsoBI	CYCGRG	1 cut(s)	1745
Bsp1286I	GDGCHC	4 cut(s)	454, 1218, 1555, 1757
Bsp1407I	TGTACA	1 cut(s)	1525
Bsp143I	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
BspACI	CCGC	4 cut(s)	474, 1105, 2028, 2144
BspANI	GGCC	2 cut(s)	1076, 2219
BspCNI	CTCAG	4 cut(s)	1725, 1830, 1843, 2010
BspLI	GGNNCC	4 cut(s)	417, 1075, 1147, 1799
BspMI	ACCTGC	2 cut(s)	595, 1157
BspPI	GGATC	4 cut(s)	235, 410, 423, 2012
BspQI	GCTCTTC	1 cut(s)	1856
BspT107I	GGYRCC	1 cut(s)	1145
BspTI	CTTAAG	1 cut(s)	469
BsrDI	GCAATG	3 cut(s)	273, 336, 541
BsrGI	TGTACA	1 cut(s)	1525
BsrI	ACTGG	3 cut(s)	1798, 1938, 2220
BssECI	CCNNGG	5 cut(s)	106, 1030, 1726, 1745, 1867
BssMI	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
BssT1I	CCWWGG	2 cut(s)	1030, 1867
Bst2UI	CCWGG	4 cut(s)	25, 108, 1437, 2173
Bst4CI	ACNGT	7 cut(s)	83, 188, 258, 427, 895, 995, 1121
Bst6I	CTCTTC	1 cut(s)	1856
BstAFI	CTTAAG	1 cut(s)	469
BstAPI	GCANNNNNTGC	1 cut(s)	368
BstAUI	TGTACA	1 cut(s)	1525
BstBAI	YACGTR	2 cut(s)	890, 1129
BstC8I	GCNNGC	1 cut(s)	1982
BstDEI	CTNAG	4 cut(s)	1733, 1838, 1851, 2018
BstH2I	RGCGCY	1 cut(s)	786
BstHHI	GCGC	1 cut(s)	785
BstKTI	GATC	9 cut(s)	243, 398, 418, 523, 945, 1113, 1333, 1712, 2007
BstMAI	GTCTC	3 cut(s)	1127, 1174, 2192
BstMBI	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
BstMWI	GCNNNNNNNGC	6 cut(s)	199, 368, 721, 977, 1528, 2034
BstNI	CCWGG	4 cut(s)	25, 108, 1437, 2173
BstNSI	RCATGY	4 cut(s)	553, 581, 859, 1165
BstSCI	CCNGG	9 cut(s)	23, 106, 306, 1435, 1679, 1725, 1744, 1745, 2171
BstSFI	CTRYAG	2 cut(s)	75, 876
BstSLI	GKGCMC	3 cut(s)	454, 1218, 1555
BstV1I	GCAGC	6 cut(s)	217, 374, 628, 1370, 2086, 2218
BstV2I	GAAGAC	1 cut(s)	1745
BstX2I	RGATCY	3 cut(s)	415, 1709, 2004
BstYI	RGATCY	3 cut(s)	415, 1709, 2004
Bsu36I	CCTNAGG	1 cut(s)	2018
BsuRI	GGCC	2 cut(s)	1076, 2219
BtsI	GCAGTG	1 cut(s)	61
BtsIMutI	CAGTG	3 cut(s)	61, 184, 2227
BveI	ACCTGC	2 cut(s)	595, 1157
Cac8I	GCNNGC	1 cut(s)	1982
CaiI	CAGNNNCTG	2 cut(s)	1837, 2226
CfoI	GCGC	1 cut(s)	785
Cfr13I	GGNCC	1 cut(s)	1074
Cfr9I	CCCGGG	1 cut(s)	1745
CseI	GACGC	1 cut(s)	2198
Csp6I	GTAC	6 cut(s)	891, 991, 1146, 1399, 1526, 2104
CviQI	GTAC	6 cut(s)	891, 991, 1146, 1399, 1526, 2104
DdeI	CTNAG	4 cut(s)	1733, 1838, 1851, 2018
DpnI	GATC	9 cut(s)	242, 397, 417, 522, 944, 1112, 1332, 1711, 2006
DpnII	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
DraI	TTTAAA	1 cut(s)	1443
DraIII	CACNNNGTG	1 cut(s)	2044
DriI	GACNNNNNGTC	2 cut(s)	108, 911
Eam1104I	CTCTTC	1 cut(s)	1856
Eam1105I	GACNNNNNGTC	2 cut(s)	108, 911
EarI	CTCTTC	1 cut(s)	1856
Ecl136II	GAGCTC	1 cut(s)	1755
Eco130I	CCWWGG	2 cut(s)	1030, 1867
Eco24I	GRGCYC	1 cut(s)	1757
Eco32I	GATATC	1 cut(s)	2080
Eco47III	AGCGCT	1 cut(s)	784
Eco53kI	GAGCTC	1 cut(s)	1755
Eco57I	CTGAAG	2 cut(s)	1590, 1870
Eco81I	CCTNAGG	1 cut(s)	2018
Eco88I	CYCGRG	1 cut(s)	1745
EcoICRI	GAGCTC	1 cut(s)	1755
EcoO109I	RGGNCCY	1 cut(s)	1074
EcoRI	GAATTC	2 cut(s)	28, 1095
EcoRII	CCWGG	4 cut(s)	23, 106, 1435, 2171
EcoRV	GATATC	1 cut(s)	2080
EcoT14I	CCWWGG	2 cut(s)	1030, 1867
EcoT22I	ATGCAT	2 cut(s)	373, 1195
EcoT38I	GRGCYC	1 cut(s)	1757
ErhI	CCWWGG	2 cut(s)	1030, 1867
Esp3I	CGTCTC	1 cut(s)	1127
FaqI	GGGAC	2 cut(s)	588, 1743
FauI	CCCGC	2 cut(s)	467, 1098
FauNDI	CATATG	3 cut(s)	46, 246, 1407
FbaI	TGATCA	2 cut(s)	942, 1110
FblI	GTMKAC	2 cut(s)	78, 436
Fnu4HI	GCNGC	7 cut(s)	231, 363, 642, 1359, 2029, 2100, 2207
FriOI	GRGCYC	1 cut(s)	1757
Fsp4HI	GCNGC	7 cut(s)	231, 363, 642, 1359, 2029, 2100, 2207
FspBI	CTAG	4 cut(s)	6, 512, 1184, 1719
GlaI	GCGC	1 cut(s)	784
GluI	GCNGC	7 cut(s)	231, 363, 642, 1359, 2029, 2100, 2207
GsaI	CCCAGC	2 cut(s)	206, 1485
HaeII	RGCGCY	1 cut(s)	786
HaeIII	GGCC	2 cut(s)	1076, 2219
HapII	CCGG	5 cut(s)	307, 1680, 1726, 1746, 2180
HgaI	GACGC	1 cut(s)	2198
HhaI	GCGC	1 cut(s)	785
Hin6I	GCGC	1 cut(s)	783
HinP1I	GCGC	1 cut(s)	783
HincII	GTYRAC	2 cut(s)	102, 1768
HindII	GTYRAC	2 cut(s)	102, 1768
HpaI	GTTAAC	1 cut(s)	1768
HpaII	CCGG	5 cut(s)	307, 1680, 1726, 1746, 2180
HphI	GGTGA	3 cut(s)	1120, 1403, 1927
Hpy166II	GTNNAC	8 cut(s)	59, 79, 102, 437, 452, 853, 991, 1768
Hpy188I	TCNGA	8 cut(s)	68, 351, 400, 460, 1609, 1633, 2004, 2214
Hpy188III	TCNNGA	6 cut(s)	145, 382, 705, 1114, 1880, 2011
Hpy8I	GTNNAC	8 cut(s)	59, 79, 102, 437, 452, 853, 991, 1768
Hpy99I	CGWCG	1 cut(s)	2096
HpyAV	CCTTC	4 cut(s)	896, 1604, 1685, 2209
HpyCH4III	ACNGT	7 cut(s)	83, 188, 258, 427, 895, 995, 1121
HpyCH4IV	ACGT	3 cut(s)	61, 889, 1128
HpyF10VI	GCNNNNNNNGC	6 cut(s)	199, 368, 721, 977, 1528, 2034
HpyF3I	CTNAG	4 cut(s)	1733, 1838, 1851, 2018
HpySE526I	ACGT	3 cut(s)	61, 889, 1128
HspAI	GCGC	1 cut(s)	783
KpnI	GGTACC	1 cut(s)	1149
Ksp22I	TGATCA	2 cut(s)	942, 1110
KspAI	GTTAAC	1 cut(s)	1768
Kzo9I	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
LguI	GCTCTTC	1 cut(s)	1856
LmnI	GCTCC	1 cut(s)	1752
Lsp1109I	GCAGC	6 cut(s)	217, 374, 628, 1370, 2086, 2218
LweI	GCATC	9 cut(s)	288, 358, 468, 684, 757, 990, 1180, 1401, 1525
MaeI	CTAG	4 cut(s)	6, 512, 1184, 1719
MaeII	ACGT	3 cut(s)	61, 889, 1128
MaeIII	GTNAC	5 cut(s)	421, 950, 1231, 1336, 2044
MalI	GATC	9 cut(s)	242, 397, 417, 522, 944, 1112, 1332, 1711, 2006
MboI	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
MboII	GAAGA	7 cut(s)	187, 190, 676, 836, 1750, 1873, 1999
MflI	RGATCY	3 cut(s)	415, 1709, 2004
MhlI	GDGCHC	4 cut(s)	454, 1218, 1555, 1757
MlyI	GAGTC	1 cut(s)	1735
MmeI	TCCRAC	1 cut(s)	302
Mph1103I	ATGCAT	2 cut(s)	373, 1195
MroXI	GAANNNNTTC	4 cut(s)	906, 1020, 1225, 1295
MseI	TTAA	8 cut(s)	470, 546, 711, 761, 1323, 1442, 1512, 1767
MslI	CAYNNNNRTG	3 cut(s)	492, 1272, 1581
MspCI	CTTAAG	1 cut(s)	469
MspI	CCGG	5 cut(s)	307, 1680, 1726, 1746, 2180
MspR9I	CCNGG	9 cut(s)	25, 108, 308, 1437, 1681, 1727, 1746, 1747, 2173
Mva1269I	GAATGC	5 cut(s)	331, 364, 1047, 1246, 1588
MvaI	CCWGG	4 cut(s)	25, 108, 1437, 2173
MwoI	GCNNNNNNNGC	6 cut(s)	199, 368, 721, 977, 1528, 2034
NciI	CCSGG	5 cut(s)	308, 1681, 1727, 1746, 1747
NdeI	CATATG	3 cut(s)	46, 246, 1407
NdeII	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
NlaIV	GGNNCC	4 cut(s)	417, 1075, 1147, 1799
NmuCI	GTSAC	2 cut(s)	1231, 2044
NsiI	ATGCAT	2 cut(s)	373, 1195
NspI	RCATGY	4 cut(s)	553, 581, 859, 1165
PciI	ACATGT	3 cut(s)	549, 855, 1161
PciSI	GCTCTTC	1 cut(s)	1856
PcsI	WCGNNNNNNNCGW	2 cut(s)	58, 1914
PctI	GAATGC	5 cut(s)	331, 364, 1047, 1246, 1588
PdmI	GAANNNNTTC	4 cut(s)	906, 1020, 1225, 1295
PfeI	GAWTC	9 cut(s)	160, 464, 484, 681, 795, 881, 1428, 1628, 1971
PfoI	TCCNGGA	1 cut(s)	306
PkrI	GCNGC	7 cut(s)	232, 364, 643, 1360, 2030, 2101, 2208
PleI	GAGTC	1 cut(s)	1735
PpsI	GAGTC	1 cut(s)	1735
Ppu21I	YACGTR	2 cut(s)	890, 1129
PscI	ACATGT	3 cut(s)	549, 855, 1161
PsiI	TTATAA	1 cut(s)	197
Psp124BI	GAGCTC	1 cut(s)	1757
Psp6I	CCWGG	4 cut(s)	23, 106, 1435, 2171
PspFI	CCCAGC	2 cut(s)	202, 1481
PspGI	CCWGG	4 cut(s)	23, 106, 1435, 2171
PspN4I	GGNNCC	4 cut(s)	417, 1075, 1147, 1799
PspPI	GGNCC	1 cut(s)	1074
PsrI	GAACNNNNNNTAC	2 cut(s)	1109, 1141
PstNI	CAGNNNCTG	2 cut(s)	1837, 2226
PsuI	RGATCY	3 cut(s)	415, 1709, 2004
RsaI	GTAC	6 cut(s)	892, 992, 1147, 1400, 1527, 2105
RsaNI	GTAC	6 cut(s)	891, 991, 1146, 1399, 1526, 2104
RseI	CAYNNNNRTG	3 cut(s)	492, 1272, 1581
SacI	GAGCTC	1 cut(s)	1757
SapI	GCTCTTC	1 cut(s)	1856
SaqAI	TTAA	8 cut(s)	470, 546, 711, 761, 1323, 1442, 1512, 1767
SatI	GCNGC	7 cut(s)	231, 363, 642, 1359, 2029, 2100, 2207
Sau3AI	GATC	9 cut(s)	240, 395, 415, 520, 942, 1110, 1330, 1709, 2004
Sau96I	GGNCC	1 cut(s)	1074
SchI	GAGTC	1 cut(s)	1735
ScrFI	CCNGG	9 cut(s)	25, 108, 308, 1437, 1681, 1727, 1746, 1747, 2173
SduI	GDGCHC	4 cut(s)	454, 1218, 1555, 1757
SfaNI	GCATC	9 cut(s)	288, 358, 468, 684, 757, 990, 1180, 1401, 1525
SfcI	CTRYAG	2 cut(s)	75, 876
SmaI	CCCGGG	1 cut(s)	1747
SmiMI	CAYNNNNRTG	3 cut(s)	492, 1272, 1581
SmlI	CTYRAG	1 cut(s)	469
SmoI	CTYRAG	1 cut(s)	469
SsiI	CCGC	4 cut(s)	474, 1105, 2028, 2144
SspMI	CTAG	4 cut(s)	6, 512, 1184, 1719
SstI	GAGCTC	1 cut(s)	1757
StyD4I	CCNGG	9 cut(s)	23, 106, 306, 1435, 1679, 1725, 1744, 1745, 2171
StyI	CCWWGG	2 cut(s)	1030, 1867
TaaI	ACNGT	7 cut(s)	83, 188, 258, 427, 895, 995, 1121
TaiI	ACGT	3 cut(s)	64, 892, 1131
TaqI	TCGA	3 cut(s)	1908, 2091, 2149
TatI	WGTACW	3 cut(s)	990, 1398, 1525
TauI	GCSGC	1 cut(s)	2031
TfiI	GAWTC	9 cut(s)	160, 464, 484, 681, 795, 881, 1428, 1628, 1971
Tru1I	TTAA	8 cut(s)	470, 546, 711, 761, 1323, 1442, 1512, 1767
Tru9I	TTAA	8 cut(s)	470, 546, 711, 761, 1323, 1442, 1512, 1767
TscAI	CASTG	3 cut(s)	61, 191, 2227
TseFI	GTSAC	2 cut(s)	1231, 2044
TseI	GCWGC	6 cut(s)	230, 362, 641, 1358, 2099, 2206
Tsp45I	GTSAC	2 cut(s)	1231, 2044
TspGWI	ACGGA	1 cut(s)	2084
TspMI	CCCGGG	1 cut(s)	1745
TspRI	CASTG	3 cut(s)	61, 191, 2227
Vha464I	CTTAAG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	450
XapI	RAATTY	3 cut(s)	28, 560, 1095
XceI	RCATGY	4 cut(s)	553, 581, 859, 1165
XmaI	CCCGGG	1 cut(s)	1745
XmiI	GTMKAC	2 cut(s)	78, 436
XmnI	GAANNNNTTC	4 cut(s)	906, 1020, 1225, 1295
XspI	CTAG	4 cut(s)	6, 512, 1184, 1719
Zsp2I	ATGCAT	2 cut(s)	373, 1195

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.