Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005453

Physical Location & Seq

Genomic Coordinates Reverse (-)

76347317 .. 76350108

Gene Structure 2792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0570400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGCTGCTCAACTACATTTGTTGCAGCAAAGGAAAATGGCTTTCCCTGTAAGGCTGCTTCTTTTTCTTTCATCACTTTATCTGGTTCCGATTTCTGTGTTTGCTCAGACTGACGGCAAAGTGGTTGTGGGAGCTTCTCTCTCTGCAACTGCAGGTAACAGCTCCTCGTGGCTTTCTCCTTCTGGCGATTTCGCCTTTGGTTTTCGACAACTCGAAAACAGTGATCTTTTCTTGCTTTCTTTATGGTATGCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATAATGGGGATAGTCCTGCAGCTGTAGCTAAGGGTTCACTTCTGAATTTGACTGCTGACAGTGGACTAGTGCTTACAAGTCCTCGCGGTGTTCAGCTTTGGAAATCTGAGTCCATTTCTGGAGATGTTGCCTTTGGGGTCTTGAATGATACAGGCAACTTTGTTCTTGAAGATGACAATTCTGAGAGCTTATGGGAGACCTTCAATTATCCAATTCATACCGTTTTACCAGGGCAGGAAATCAAAAAAGGAGGGAAGCTTTCGTCTCAACAATCCGAGACTAACTTTTCGAAAGGAAGATTCGAGCTACGTATGCAAGAAGATGGCAATCTTGTGCTTGTCACCATAAACTTGCCAACTGAGTTTGCCAACGCGCCTTACTATGCGAGTGACACTACCGGTGAATCAAATTCTTCTACTGCTGGTACAAAGCTGGAGTTCAATAGCTCTGGCTACATGTATGTTCTGAGAGAGAACGGTGAGAAACTCTCAATCAAAGAAGCAGAGACAGTCTCAGCTAGGAGCTTCTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTTGCTCAATACTCTCACCCGAAAAATTTTACTGGTAATGAAAGCTGGAGTGTTGTTTGGTCAGTGCCAGATAACATATGCACTATGACGATTGATTCAGGTCTGGGTGTATGTGGCTACAACAGTATCTGCACTCTCCAAGGTCAGAGGCCAACCTGTGCATGCCCAAAAGGATACTCTTTACTGGATCCAAATGATCCGTATGGGAATTGCAAGCCGGATTTCATACAAGGCTGTGAAGAAGATAAGCAGAGTCCCACAAATGATATATATGAAGTTCAGATGCTGAACAATACGGATTGGCCATTGTCAGATTTTATGCAGTTAAATCCTTCTACCCCAGAGAGTTGCAACCAATCTTGCTTTGAAGATTGTTTGTGTGCTGTTGCTATTTACAGAGTTGAAACCTGTTGGAAAAAGAAGTTACCTCTTTCAAATGGGAGAGTGGATAGCGGGCTTAATTCACAGGCCTTCATCAAAGTCAGGAAGGGTAATTTAACTCTACCAGTTCCTCAACCGCCAAATCCGGATGACAAGAAGAGGAAGAACCAGACAACTTTAATACGCGTGGGATCAGCGCTTCTTGGTACCTCAATCTTTGCTAACTTAATGTTAAGTGCTATAGTTTGTTTGGGATTTTTCTTCAGTTACCAGAAGAAACATGTGAGTCCTAACCAAAAAGTTTTGGACTCGAATTTGCGGTCTTTTAGTTATGAAGAGCTTAAAGAAGCAACAAATGGATTTAACGAAGAATTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGAATATTGCAAATTGGTTCTGGTGTCCCCGTGGCAGTGAAGAAGCTAAATTTTGTGGTACTAGATAGTGAGAAGGAATTCAAGACAGAACTGAACATAATTGGTCAGACACATCACAAGAATCTGGTTAGACTTGTTGGATATTGTGACGAGGGACAAGAACGGTTACTAGTATATGAGTTCTTGAGCAAAGGGACATTAGCAAACTTTCTTTTTGCTGATACAAAACCAAGTTGGAAGCACAGGATTGATATTGCTTATGGAGTTGCTAAAGGACTTCTGTACTTGCATGAAGAGTGCAGCACCCAGATCATCCATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGATTACTACAATGCTCGGATAGCTGACTTTGGAGTGGCAAAGCTTTTAATGATGAATCAGAGCCAAACTCAAACTGCCATAAGAGGAACAAAAGGGTATGTTGCACCTGAGTGGTTCCGGAACCTGCCAATCACTACCAAAGTTGATGTGTATAGCTTTGGTGTGGTGCTGCTAGAGGCCATTTGCTGCAGGAGAAGCGTTGATATGGAAAATGTTTCCGAAGAGAGAGCCATTTTAACCGATTGGGTCTATGATTGCTACCTCGAAGGAGACTTGGTTGCGATTGTTGACAATGAAATGGAGGCCTTGCATGAGAAAACAAAGCTTGAAAGGTTTGTCATGGTTGCTCTTTGGTGTATCCAAGAAGACCTTTCTCTTCGACCCACTATGAGGAAGGTTGTGCAGATGCTTGAAGGAGCAGTGGAAGTACATGTTCCACCATGTCCATCACCTTACAGCAGAGCAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

817

Amino Acids

90.86

Weight (kDa)

5.42

Isoelectric Point (pI)

37.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	90 - 179	2.8e-13	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	530 - 798	6.1e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	531 - 796	6.1e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33990 AT4G33990
fragaria_vesca	FvH4_2g05910
malus_domestica	MD05G1081900.v1.1
prunus_persica	Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1 Prupe.8G126500_v2.0.a1
pyrus_communis	pycom05g07680
rosa_chinensis	RchiOBHm_Chr2g0134891 RchiOBHm_Chr6g0257591
rosa_laevigata	RLG00000014704 RLG00000014708
rosa_multiflora	Rmu_sc0004702.1_g000004
rosa_roxburghii	Rroxscaffold_7G00208820
rosa_rugosa	Rorug02G0320700 Rorug05G0570400
rosa_samantha	Rh2AG373000 Rh2CG356900 Rh6AG087200 Rh6BG080500 Rh6CG075800 Rh6DG072600
rosa_wichuraiana	Rw2G030350 Rw6G007750 Rw6G007790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	143, 2115
Acc65I	GGTACC	1 cut(s)	1433
AccB1I	GGYRCC	1 cut(s)	1433
AccB7I	CCANNNNNTGG	1 cut(s)	276
AccII	CGCG	3 cut(s)	372, 659, 1413
AccIII	TCCGGA	2 cut(s)	1372, 2100
AciI	CCGC	4 cut(s)	372, 1299, 1364, 1546
AclWI	GGATC	4 cut(s)	1028, 1037, 1041, 1426
AcoI	YGGCCR	1 cut(s)	1148
AcsI	RAATTY	6 cut(s)	331, 694, 871, 1540, 1681, 1709
AcuI	CTGAAG	1 cut(s)	1474
AfaI	GTAC	5 cut(s)	712, 1435, 1692, 1916, 2412
AfeI	AGCGCT	1 cut(s)	1425
AfiI	CCNNNNNNNGG	2 cut(s)	276, 2373
AflIII	ACRYGT	4 cut(s)	741, 1411, 1507, 2413
AgeI	ACCGGT	1 cut(s)	683
AhlI	ACTAGT	2 cut(s)	352, 1801
AjnI	CCWGG	1 cut(s)	514
AjuI	GAANNNNNNNTTGG	2 cut(s)	259, 291
AleI	CACNNNNGTG	1 cut(s)	2092
Alw26I	GTCTC	6 cut(s)	476, 555, 557, 785, 802, 2247
AlwI	GGATC	4 cut(s)	1028, 1037, 1041, 1426
AlwNI	CAGNNNCTG	2 cut(s)	975, 1132
Aor13HI	TCCGGA	2 cut(s)	1372, 2100
Aor51HI	AGCGCT	1 cut(s)	1425
AoxI	GGCC	5 cut(s)	995, 1148, 1314, 2160, 2286
ApeKI	GCWGC	7 cut(s)	5, 25, 55, 305, 1932, 2152, 2169
ApoI	RAATTY	6 cut(s)	331, 694, 871, 1540, 1681, 1709
ArsI	GACNNNNNNTTYG	4 cut(s)	556, 588, 1532, 1564
AsiGI	ACCGGT	1 cut(s)	683
Asp700I	GAANNNNTTC	1 cut(s)	1709
Asp718I	GGTACC	1 cut(s)	1433
AspLEI	GCGC	2 cut(s)	661, 1426
AsuHPI	GGTGA	5 cut(s)	619, 698, 776, 854, 2424
AsuII	TTCGAA	1 cut(s)	575
BaeI	ACNNNNGTAYC	2 cut(s)	955, 988
BalI	TGGCCA	1 cut(s)	1150
BamHI	GGATCC	1 cut(s)	1033
BanI	GGYRCC	1 cut(s)	1433
BarI	GAAGNNNNNNTAC	2 cut(s)	42, 74
BauI	CACGAG	1 cut(s)	166
BbsI	GAAGAC	1 cut(s)	2355
BbvI	GCAGC	6 cut(s)	37, 42, 317, 1944, 2139, 2156
BccI	CCATC	3 cut(s)	602, 833, 2437
BceAI	ACGGC	1 cut(s)	130
BciT130I	CCWGG	1 cut(s)	516
BciVI	GTATCC	2 cut(s)	1013, 2351
BcoDI	GTCTC	6 cut(s)	476, 555, 557, 785, 802, 2247
BcuI	ACTAGT	2 cut(s)	352, 1801
BfaI	CTAG	6 cut(s)	353, 804, 1694, 1802, 1979, 2156
BfmI	CTRYAG	5 cut(s)	150, 303, 309, 1467, 2170
BfoI	RGCGCY	1 cut(s)	1427
BfuAI	ACCTGC	2 cut(s)	143, 2115
BfuI	GTATCC	2 cut(s)	1013, 2351
BisI	GCNGC	7 cut(s)	6, 26, 56, 306, 1933, 2153, 2170
BlsI	GCNGC	7 cut(s)	7, 27, 57, 307, 1934, 2154, 2171
Bme1390I	CCNGG	1 cut(s)	516
BmiI	GGNNCC	5 cut(s)	87, 1035, 1435, 2099, 2105
BmrFI	CCNGG	1 cut(s)	516
BmsI	GCATC	2 cut(s)	1119, 2379
BpiI	GAAGAC	1 cut(s)	2355
BpmI	CTGGAG	3 cut(s)	426, 740, 913
Bpu10I	CCTNAGC	1 cut(s)	315
Bpu14I	TTCGAA	1 cut(s)	575
BpuEI	CTTGAG	1 cut(s)	1837
BsaAI	YACGTR	1 cut(s)	596
BsaBI	GATNNNNATC	1 cut(s)	612
BsaI	GGTCTC	1 cut(s)	476
BsaJI	CCNNGG	3 cut(s)	515, 985, 1662
BsaWI	WCCGGW	3 cut(s)	683, 1372, 2100
BsaXI	ACNNNNNCTCC	2 cut(s)	2244, 2274
Bsc4I	CCNNNNNNNGG	2 cut(s)	276, 2373
Bse118I	RCCGGY	1 cut(s)	683
Bse1I	ACTGG	3 cut(s)	883, 1035, 1352
Bse8I	GATNNNNATC	1 cut(s)	612
BseAI	TCCGGA	2 cut(s)	1372, 2100
BseBI	CCWGG	1 cut(s)	516
BseDI	CCNNGG	3 cut(s)	515, 985, 1662
BseGI	GGATG	2 cut(s)	1381, 1944
BseJI	GATNNNNATC	1 cut(s)	612
BseLI	CCNNNNNNNGG	2 cut(s)	276, 2373
BseMII	CTCAG	8 cut(s)	119, 384, 459, 636, 743, 813, 1979, 2082
BseNI	ACTGG	3 cut(s)	883, 1035, 1352
BseRI	GAGGAG	1 cut(s)	154
BseXI	GCAGC	6 cut(s)	37, 42, 317, 1944, 2139, 2156
BsgI	GTGCAG	3 cut(s)	961, 1951, 2405
Bsh1236I	CGCG	3 cut(s)	372, 659, 1413
BshFI	GGCC	5 cut(s)	997, 1150, 1316, 2162, 2288
BshNI	GGYRCC	1 cut(s)	1433
BshTI	ACCGGT	1 cut(s)	683
BsiSI	CCGG	4 cut(s)	684, 1064, 1373, 2101
BslFI	GGGAC	4 cut(s)	1086, 1643, 1800, 1840
BslI	CCNNNNNNNGG	2 cut(s)	276, 2373
BsmAI	GTCTC	6 cut(s)	476, 555, 557, 785, 802, 2247
BsmBI	CGTCTC	1 cut(s)	555
BsmFI	GGGAC	4 cut(s)	1086, 1643, 1800, 1840
BsnI	GGCC	5 cut(s)	997, 1150, 1316, 2162, 2288
Bso31I	GGTCTC	1 cut(s)	476
Bsp119I	TTCGAA	1 cut(s)	575
Bsp13I	TCCGGA	2 cut(s)	1372, 2100
Bsp143I	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
BspACI	CCGC	4 cut(s)	372, 1299, 1364, 1546
BspANI	GGCC	5 cut(s)	997, 1150, 1316, 2162, 2288
BspCNI	CTCAG	8 cut(s)	118, 385, 460, 637, 744, 812, 1978, 2083
BspEI	TCCGGA	2 cut(s)	1372, 2100
BspFNI	CGCG	3 cut(s)	372, 659, 1413
BspLI	GGNNCC	5 cut(s)	87, 1035, 1435, 2099, 2105
BspMAI	CTGCAG	3 cut(s)	154, 307, 2174
BspMI	ACCTGC	2 cut(s)	143, 2115
BspPI	GGATC	4 cut(s)	1028, 1037, 1041, 1426
BspQI	GCTCTTC	1 cut(s)	1557
BspT104I	TTCGAA	1 cut(s)	575
BspT107I	GGYRCC	1 cut(s)	1433
BspTNI	GGTCTC	1 cut(s)	476
BsrFI	RCCGGY	1 cut(s)	683
BsrI	ACTGG	3 cut(s)	883, 1035, 1352
BssAI	RCCGGY	1 cut(s)	683
BssECI	CCNNGG	3 cut(s)	515, 985, 1662
BssMI	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
BssSI	CACGAG	1 cut(s)	166
BssT1I	CCWWGG	1 cut(s)	985
Bst2BI	CACGAG	1 cut(s)	166
Bst2UI	CCWGG	1 cut(s)	516
Bst4CI	ACNGT	7 cut(s)	221, 347, 508, 764, 796, 971, 1797
Bst6I	CTCTTC	5 cut(s)	1379, 1557, 1920, 2199, 2364
BstBAI	YACGTR	1 cut(s)	596
BstBI	TTCGAA	1 cut(s)	575
BstC8I	GCNNGC	4 cut(s)	1009, 1061, 1301, 2449
BstDSI	CCRYGG	1 cut(s)	1662
BstF5I	GGATG	2 cut(s)	1381, 1944
BstFNI	CGCG	3 cut(s)	372, 659, 1413
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	2 cut(s)	661, 1426
BstKTI	GATC	5 cut(s)	226, 1036, 1045, 1421, 1944
BstMAI	GTCTC	6 cut(s)	476, 555, 557, 785, 802, 2247
BstMBI	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
BstMWI	GCNNNNNNNGC	5 cut(s)	311, 598, 2003, 2178, 2448
BstNI	CCWGG	1 cut(s)	516
BstNSI	RCATGY	4 cut(s)	745, 1011, 1511, 2417
BstSCI	CCNGG	1 cut(s)	514
BstSFI	CTRYAG	5 cut(s)	150, 303, 309, 1467, 2170
BstSNI	TACGTA	1 cut(s)	596
BstUI	CGCG	3 cut(s)	372, 659, 1413
BstV1I	GCAGC	6 cut(s)	37, 42, 317, 1944, 2139, 2156
BstV2I	GAAGAC	1 cut(s)	2355
BstX2I	RGATCY	1 cut(s)	1033
BstYI	RGATCY	1 cut(s)	1033
BsuI	GTATCC	2 cut(s)	1013, 2351
BsuRI	GGCC	5 cut(s)	997, 1150, 1316, 2162, 2288
BtgI	CCRYGG	1 cut(s)	1662
BtsCI	GGATG	2 cut(s)	1381, 1944
BtsI	GCAGTG	2 cut(s)	1674, 2409
BtsIMutI	CAGTG	5 cut(s)	226, 352, 915, 1674, 2409
BveI	ACCTGC	2 cut(s)	143, 2115
Cac8I	GCNNGC	4 cut(s)	1009, 1061, 1301, 2449
CaiI	CAGNNNCTG	2 cut(s)	975, 1132
CfoI	GCGC	2 cut(s)	661, 1426
Cfr10I	RCCGGY	1 cut(s)	683
Csp6I	GTAC	5 cut(s)	711, 1434, 1691, 1915, 2411
CspAI	ACCGGT	1 cut(s)	683
CviAII	CATG	8 cut(s)	742, 1008, 1508, 1922, 2294, 2323, 2414, 2424
CviQI	GTAC	5 cut(s)	711, 1434, 1691, 1915, 2411
DpnI	GATC	5 cut(s)	225, 1035, 1044, 1420, 1943
DpnII	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
EaeI	YGGCCR	1 cut(s)	1148
Eam1104I	CTCTTC	5 cut(s)	1379, 1557, 1920, 2199, 2364
EarI	CTCTTC	5 cut(s)	1379, 1557, 1920, 2199, 2364
Eco105I	TACGTA	1 cut(s)	596
Eco130I	CCWWGG	1 cut(s)	985
Eco147I	AGGCCT	2 cut(s)	1316, 2288
Eco31I	GGTCTC	1 cut(s)	476
Eco47III	AGCGCT	1 cut(s)	1425
Eco57I	CTGAAG	1 cut(s)	1474
EcoRI	GAATTC	1 cut(s)	1709
EcoRII	CCWGG	1 cut(s)	514
EcoT14I	CCWWGG	1 cut(s)	985
ErhI	CCWWGG	1 cut(s)	985
Esp3I	CGTCTC	1 cut(s)	555
FaeI	CATG	8 cut(s)	745, 1011, 1511, 1925, 2297, 2326, 2417, 2427
FalI	AAGNNNNNCTT	2 cut(s)	2337, 2369
FaqI	GGGAC	4 cut(s)	1086, 1643, 1800, 1840
FatI	CATG	8 cut(s)	741, 1007, 1507, 1921, 2293, 2322, 2413, 2423
FauI	CCCGC	1 cut(s)	1292
FauNDI	CATATG	1 cut(s)	923
Fnu4HI	GCNGC	7 cut(s)	6, 26, 56, 306, 1933, 2153, 2170
FokI	GGATG	2 cut(s)	1388, 1931
Fsp4HI	GCNGC	7 cut(s)	6, 26, 56, 306, 1933, 2153, 2170
FspBI	CTAG	6 cut(s)	353, 804, 1694, 1802, 1979, 2156
GlaI	GCGC	2 cut(s)	660, 1425
GluI	GCNGC	7 cut(s)	6, 26, 56, 306, 1933, 2153, 2170
GsuI	CTGGAG	3 cut(s)	426, 740, 913
HaeII	RGCGCY	1 cut(s)	1427
HaeIII	GGCC	5 cut(s)	997, 1150, 1316, 2162, 2288
HapII	CCGG	4 cut(s)	684, 1064, 1373, 2101
HhaI	GCGC	2 cut(s)	661, 1426
Hin1II	CATG	8 cut(s)	745, 1011, 1511, 1925, 2297, 2326, 2417, 2427
Hin6I	GCGC	2 cut(s)	659, 1424
HinP1I	GCGC	2 cut(s)	659, 1424
HincII	GTYRAC	1 cut(s)	2272
HindII	GTYRAC	1 cut(s)	2272
HindIII	AAGCTT	3 cut(s)	542, 2024, 2306
HpaII	CCGG	4 cut(s)	684, 1064, 1373, 2101
HphI	GGTGA	5 cut(s)	619, 698, 776, 854, 2424
Hpy166II	GTNNAC	4 cut(s)	323, 350, 1627, 2272
Hpy8I	GTNNAC	4 cut(s)	323, 350, 1627, 2272
HpyAV	CCTTC	9 cut(s)	189, 496, 1188, 1327, 1327, 1699, 2243, 2371, 2390
HpyCH4III	ACNGT	7 cut(s)	221, 347, 508, 764, 796, 971, 1797
HpyCH4IV	ACGT	1 cut(s)	595
HpyF10VI	GCNNNNNNNGC	5 cut(s)	311, 598, 2003, 2178, 2448
HpySE526I	ACGT	1 cut(s)	595
Hsp92II	CATG	8 cut(s)	745, 1011, 1511, 1925, 2297, 2326, 2417, 2427
HspAI	GCGC	2 cut(s)	659, 1424
Kpn2I	TCCGGA	2 cut(s)	1372, 2100
KpnI	GGTACC	1 cut(s)	1437
Kzo9I	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
LguI	GCTCTTC	1 cut(s)	1557
LmnI	GCTCC	4 cut(s)	131, 167, 807, 2399
Lsp1109I	GCAGC	6 cut(s)	37, 42, 317, 1944, 2139, 2156
LweI	GCATC	2 cut(s)	1119, 2379
MaeI	CTAG	6 cut(s)	353, 804, 1694, 1802, 1979, 2156
MaeII	ACGT	1 cut(s)	595
MaeIII	GTNAC	8 cut(s)	155, 625, 674, 1269, 1493, 1778, 1797, 1952
MalI	GATC	5 cut(s)	225, 1035, 1044, 1420, 1943
MboI	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
MflI	RGATCY	1 cut(s)	1033
MlsI	TGGCCA	1 cut(s)	1150
MluI	ACGCGT	1 cut(s)	1411
MluNI	TGGCCA	1 cut(s)	1150
MlyI	GAGTC	4 cut(s)	404, 1108, 1522, 1529
MmeI	TCCRAC	3 cut(s)	1238, 1750, 1847
Mox20I	TGGCCA	1 cut(s)	1150
MroI	TCCGGA	2 cut(s)	1372, 2100
MroXI	GAANNNNTTC	1 cut(s)	1709
MscI	TGGCCA	1 cut(s)	1150
MslI	CAYNNNNRTG	1 cut(s)	2092
Msp20I	TGGCCA	1 cut(s)	1150
MspA1I	CMGCKG	1 cut(s)	308
MspI	CCGG	4 cut(s)	684, 1064, 1373, 2101
MspR9I	CCNGG	1 cut(s)	516
MvaI	CCWGG	1 cut(s)	516
MvnI	CGCG	3 cut(s)	372, 659, 1413
MwoI	GCNNNNNNNGC	5 cut(s)	311, 598, 2003, 2178, 2448
NdeI	CATATG	1 cut(s)	923
NdeII	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
NlaIII	CATG	8 cut(s)	745, 1011, 1511, 1925, 2297, 2326, 2417, 2427
NlaIV	GGNNCC	5 cut(s)	87, 1035, 1435, 2099, 2105
NmuCI	GTSAC	4 cut(s)	625, 674, 1778, 1952
NspI	RCATGY	4 cut(s)	745, 1011, 1511, 2417
NspV	TTCGAA	1 cut(s)	575
OliI	CACNNNNGTG	1 cut(s)	2092
PaeI	GCATGC	1 cut(s)	1011
PceI	AGGCCT	2 cut(s)	1316, 2288
PciI	ACATGT	3 cut(s)	741, 1507, 2413
PciSI	GCTCTTC	1 cut(s)	1557
PdmI	GAANNNNTTC	1 cut(s)	1709
PfeI	GAWTC	6 cut(s)	256, 585, 689, 941, 1753, 2038
PflMI	CCANNNNNTGG	1 cut(s)	276
PinAI	ACCGGT	1 cut(s)	683
PkrI	GCNGC	7 cut(s)	7, 27, 57, 307, 1934, 2154, 2171
PleI	GAGTC	4 cut(s)	403, 1107, 1521, 1529
PpsI	GAGTC	4 cut(s)	403, 1107, 1521, 1529
Ppu21I	YACGTR	1 cut(s)	596
PscI	ACATGT	3 cut(s)	741, 1507, 2413
Psp6I	CCWGG	1 cut(s)	514
PspGI	CCWGG	1 cut(s)	514
PspN4I	GGNNCC	5 cut(s)	87, 1035, 1435, 2099, 2105
PstI	CTGCAG	3 cut(s)	154, 307, 2174
PstNI	CAGNNNCTG	2 cut(s)	975, 1132
PsuI	RGATCY	1 cut(s)	1033
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	5 cut(s)	712, 1435, 1692, 1916, 2412
RsaNI	GTAC	5 cut(s)	711, 1434, 1691, 1915, 2411
RseI	CAYNNNNRTG	1 cut(s)	2092
SapI	GCTCTTC	1 cut(s)	1557
SatI	GCNGC	7 cut(s)	6, 26, 56, 306, 1933, 2153, 2170
Sau3AI	GATC	5 cut(s)	223, 1033, 1042, 1418, 1941
SchI	GAGTC	4 cut(s)	404, 1108, 1522, 1529
ScrFI	CCNGG	1 cut(s)	516
SfaNI	GCATC	2 cut(s)	1119, 2379
SfcI	CTRYAG	5 cut(s)	150, 303, 309, 1467, 2170
SfuI	TTCGAA	1 cut(s)	575
SmiMI	CAYNNNNRTG	1 cut(s)	2092
SmlI	CTYRAG	1 cut(s)	1816
SmoI	CTYRAG	1 cut(s)	1816
SnaBI	TACGTA	1 cut(s)	596
SpeI	ACTAGT	2 cut(s)	352, 1801
SphI	GCATGC	1 cut(s)	1011
SseBI	AGGCCT	2 cut(s)	1316, 2288
SsiI	CCGC	4 cut(s)	372, 1299, 1364, 1546
SspI	AATATT	1 cut(s)	1638
SspMI	CTAG	6 cut(s)	353, 804, 1694, 1802, 1979, 2156
StuI	AGGCCT	2 cut(s)	1316, 2288
StyD4I	CCNGG	1 cut(s)	514
StyI	CCWWGG	1 cut(s)	985
TaaI	ACNGT	7 cut(s)	221, 347, 508, 764, 796, 971, 1797
TaiI	ACGT	1 cut(s)	598
TaqI	TCGA	7 cut(s)	205, 213, 575, 588, 1538, 2247, 2362
TatI	WGTACW	2 cut(s)	1914, 2410
TfiI	GAWTC	6 cut(s)	256, 585, 689, 941, 1753, 2038
TscAI	CASTG	5 cut(s)	226, 352, 915, 1674, 2409
TseFI	GTSAC	4 cut(s)	625, 674, 1778, 1952
TseI	GCWGC	7 cut(s)	5, 25, 55, 305, 1932, 2152, 2169
Tsp45I	GTSAC	4 cut(s)	625, 674, 1778, 1952
TspGWI	ACGGA	2 cut(s)	1035, 1157
TspRI	CASTG	5 cut(s)	226, 352, 915, 1674, 2409
Van91I	CCANNNNNTGG	1 cut(s)	276
XapI	RAATTY	6 cut(s)	331, 694, 871, 1540, 1681, 1709
XbaI	TCTAGA	1 cut(s)	1978
XceI	RCATGY	4 cut(s)	745, 1011, 1511, 2417
XmnI	GAANNNNTTC	1 cut(s)	1709
XspI	CTAG	6 cut(s)	353, 804, 1694, 1802, 1979, 2156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.