AT4G34020

DJ-1/PfpI family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
16298262 .. 16300999
2738 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G34020.3

Sequence Viewer

Length: 1419 bp
ATGGGGTCTTTAGGATATTCGATTTCAATGATAGCTTCGCTGAGTCCAACTTTGATGGAGTCAAGGCTTATCTCTTCGATGGGTTGTGTCTCGATGACTGTTGCTCCTAGTTTTTCTTCAGTCTCTGTAGTTTCTTCTTCACTAGGGACAACAAGGAGGGACCGAACTTTAAAGCTTAGATCTTCCATGTCTCCGGGTATGGTAACAACGCTAGATTCCGATGTTGGCGTCGGGTCTTCTGCAACTACTAAAAAGGTGCTTGTTCCAATTGGATATGGGACGGAGGAAATAGAAGCTGTTGTGTTAGTTGATGTTTTACGGCGAGCTGGTGCTGATGTTACTGTTGCTTCTGTGGAGCAGAAGCTAGAGGTTGAAGGATCCTCAGGGACCAGATTGCTTGCTGATGTTCTTATCTCGAAATGTGCTGATCAAGTTTATGATTTAGTTGCTTTGCCGGGAGGCATGCCTGGTGCTGTTAGGTTAAGAGACTGTGAAATTCTCGAGAAGATCATGAAGAGACAAGCTGAAGATAAGCGGTTATACGGGGCTATATCCATGGCTCCAGCTATTACTCTTCTTCCATGGGGACTTTTGACAAGAAAGAGGACAACGGGACATCCTGCTTTTTTCGGGAAGCTTCCTACATTCTGGGCTGTTAAGACAAACATTCAGATTTCAGGGGAGCTTACAACTAGCCGTGGACCCGGCACTTCTTTCCAGTTTGCTCTTTCCTTGGCGGAGCAGCTCTTCGGAGAAACCACAGCCAAGTCAATTGAAGAGTTTCTGCTTCTGCGTGATGGTTACCAGAATCCTAAGAACAAAGAGTTCAATAGCATTGACTGGTCTTTAGACCACACACCTCGTGTTCTTATCCCGGTAGCCAACGGGTCTGAAGCGGTTGAACTGGTCTCAATTGCAGATGTTCTTAGAAGAGCCAAAGTAGATGTCACGGTTTCATCAGTTGAACGATCTTTGCGGATTACGGCATTCCAAGGCACCAAAATTATCACTGACAAATTGATTGGTGAAGCTGCTGAGTCATCATATGATCTAATCATTCTTCCGGGAGGCCATACTGGCTCAGAACGTCTGCAGAAGTCCAAAATTCTCAAGAAACTGCTCAGGGAACAACATGAATCTGGGCGAATATATGGAGCTACCAACTCTTCATCTACCGTTTTGCATAAACATGGTTTACTCAAGGAGAAGAGAACGACTGTGTATCCTTCAGAGTCAGACGAGCCTATGAATCAACAAATGATCGAAGGAGCCGAAGTTGTTATAGATGGAAACGTGATTACAAGTTTGGGGCTCGCAACTGTTACCAAATTTTCCCTGGCTATTGTTAGCAAGCTGTTCGGACATGCTAGAGCAAGGAGTGTTTCAGAAGGGCTTGTGCATGAGTATCCAAGGCAGTAA

Protein Analysis

472

Amino Acids

50.99

Weight (kDa)

8.76

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DJ-1_PfpI PF01965 3 - 94 2.9e-16 DJ-1/PfpI family
DJ-1_PfpI PF01965 134 - 296 1.5e-34 DJ-1/PfpI family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 995
AciI CCGC 4 cut(s) 535, 737, 896, 976
AclWI GGATC 2 cut(s) 372, 385
AcsI RAATTY 3 cut(s) 495, 1104, 1328
AcuI CTGAAG 4 cut(s) 102, 546, 912, 1212
AcyI GRCGYC 1 cut(s) 228
AdeI CACNNNGTG 1 cut(s) 863
AgsI TTSAA 6 cut(s) 27, 374, 776, 829, 902, 965
AjnI CCWGG 2 cut(s) 466, 1335
Alw26I GTCTC 6 cut(s) 94, 127, 195, 480, 511, 913
AlwI GGATC 2 cut(s) 372, 385
AlwNI CAGNNNCTG 1 cut(s) 125
Ama87I CYCGRG 1 cut(s) 500
AoxI GGCC 1 cut(s) 1069
ApeKI GCWGC 2 cut(s) 742, 1031
ApoI RAATTY 3 cut(s) 495, 1104, 1328
ArsI GACNNNNNNTTYG 2 cut(s) 930, 962
Asp700I GAANNNNTTC 1 cut(s) 780
AspS9I GGNCC 3 cut(s) 160, 387, 701
AsuC2I CCSGG 5 cut(s) 195, 456, 705, 875, 1065
AsuHPI GGTGA 1 cut(s) 1037
AvaI CYCGRG 1 cut(s) 500
AvaII GGWCC 3 cut(s) 160, 387, 701
AxyI CCTNAGG 1 cut(s) 382
BamHI GGATCC 1 cut(s) 377
BanI GGYRCC 1 cut(s) 995
BanII GRGCYC 1 cut(s) 1314
BauI CACGAG 1 cut(s) 861
BbsI GAAGAC 1 cut(s) 228
BbvI GCAGC 2 cut(s) 754, 1018
BccI CCATC 4 cut(s) 49, 73, 791, 1280
BceAI ACGGC 3 cut(s) 335, 681, 999
BcgI CGANNNNNNTGC 2 cut(s) 1339, 1373
BciT130I CCWGG 2 cut(s) 468, 1337
BciVI GTATCC 2 cut(s) 1233, 1416
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 5 cut(s) 195, 456, 705, 875, 1065
BcoDI GTCTC 6 cut(s) 94, 127, 195, 480, 511, 913
BfaI CTAG 6 cut(s) 108, 143, 212, 365, 693, 1368
BfmI CTRYAG 2 cut(s) 126, 1091
BfuI GTATCC 2 cut(s) 1233, 1416
BglI GCCNNNNNGGC 1 cut(s) 1077
BglII AGATCT 1 cut(s) 179
BisI GCNGC 2 cut(s) 743, 1032
BlsI GCNGC 2 cut(s) 744, 1033
Bme1390I CCNGG 7 cut(s) 195, 456, 468, 705, 875, 1065, 1337
Bme18I GGWCC 3 cut(s) 160, 387, 701
BmeT110I CYCGRG 1 cut(s) 500
BmgT120I GGNCC 3 cut(s) 160, 387, 701
BmiI GGNNCC 7 cut(s) 161, 379, 388, 561, 703, 997, 1270
BmrFI CCNGG 7 cut(s) 195, 456, 468, 705, 875, 1065, 1337
BpiI GAAGAC 1 cut(s) 228
BpmI CTGGAG 1 cut(s) 546
Bpu10I CCTNAGC 1 cut(s) 1121
BpuEI CTTGAG 2 cut(s) 1094, 1184
BpuMI CCSGG 5 cut(s) 195, 456, 705, 875, 1065
BsaHI GRCGYC 1 cut(s) 228
BsaI GGTCTC 1 cut(s) 913
BsaJI CCNNGG 7 cut(s) 555, 581, 697, 732, 991, 1335, 1409
BsaXI ACNNNNNCTCC 4 cut(s) 88, 118, 1260, 1290
Bse1I ACTGG 4 cut(s) 718, 845, 909, 1081
Bse21I CCTNAGG 1 cut(s) 382
BseBI CCWGG 2 cut(s) 468, 1337
BseDI CCNNGG 7 cut(s) 555, 581, 697, 732, 991, 1335, 1409
BseGI GGATG 1 cut(s) 616
BseMII CTCAG 5 cut(s) 32, 396, 1026, 1095, 1135
BseNI ACTGG 4 cut(s) 718, 845, 909, 1081
BseXI GCAGC 2 cut(s) 754, 1018
BshFI GGCC 1 cut(s) 1071
BshNI GGYRCC 1 cut(s) 995
BsiHKCI CYCGRG 1 cut(s) 500
BsiSI CCGG 5 cut(s) 194, 455, 705, 875, 1064
BslFI GGGAC 6 cut(s) 160, 173, 292, 400, 600, 627
BsmAI GTCTC 6 cut(s) 94, 127, 195, 480, 511, 913
BsmFI GGGAC 6 cut(s) 160, 173, 292, 400, 600, 627
BsmI GAATGC 1 cut(s) 986
BsnI GGCC 1 cut(s) 1071
Bso31I GGTCTC 1 cut(s) 913
BsoBI CYCGRG 1 cut(s) 500
Bsp1286I GDGCHC 1 cut(s) 1314
Bsp143I GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
Bsp19I CCATGG 2 cut(s) 555, 581
BspACI CCGC 4 cut(s) 535, 737, 896, 976
BspANI GGCC 1 cut(s) 1071
BspCNI CTCAG 5 cut(s) 33, 395, 1027, 1094, 1134
BspHI TCATGA 1 cut(s) 510
BspLI GGNNCC 7 cut(s) 161, 379, 388, 561, 703, 997, 1270
BspMAI CTGCAG 1 cut(s) 1095
BspPI GGATC 2 cut(s) 372, 385
BspQI GCTCTTC 2 cut(s) 752, 925
BspT107I GGYRCC 1 cut(s) 995
BspTNI GGTCTC 1 cut(s) 913
BsrI ACTGG 4 cut(s) 718, 845, 909, 1081
BssECI CCNNGG 7 cut(s) 555, 581, 697, 732, 991, 1335, 1409
BssMI GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
BssNI GRCGYC 1 cut(s) 228
BssSI CACGAG 1 cut(s) 861
BssT1I CCWWGG 5 cut(s) 555, 581, 732, 991, 1409
Bst2BI CACGAG 1 cut(s) 861
Bst2UI CCWGG 2 cut(s) 468, 1337
Bst4CI ACNGT 7 cut(s) 100, 343, 491, 952, 1177, 1219, 1321
Bst6I CTCTTC 8 cut(s) 79, 509, 579, 752, 771, 925, 1171, 1202
BstACI GRCGYC 1 cut(s) 228
BstC8I GCNNGC 5 cut(s) 324, 399, 464, 1314, 1352
BstDEI CTNAG 8 cut(s) 41, 176, 382, 813, 926, 1035, 1081, 1121
BstDSI CCRYGG 3 cut(s) 555, 581, 697
BstEII GGTNACC 1 cut(s) 800
BstF5I GGATG 1 cut(s) 616
BstKTI GATC 7 cut(s) 182, 380, 430, 510, 971, 1051, 1263
BstMAI GTCTC 6 cut(s) 94, 127, 195, 480, 511, 913
BstMBI GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
BstMWI GCNNNNNNNGC 1 cut(s) 1077
BstNI CCWGG 2 cut(s) 468, 1337
BstNSI RCATGY 2 cut(s) 466, 1367
BstPI GGTNACC 1 cut(s) 800
BstSCI CCNGG 7 cut(s) 193, 454, 466, 703, 873, 1063, 1335
BstSFI CTRYAG 2 cut(s) 126, 1091
BstV1I GCAGC 2 cut(s) 754, 1018
BstV2I GAAGAC 1 cut(s) 228
BstX2I RGATCY 2 cut(s) 179, 377
BstYI RGATCY 2 cut(s) 179, 377
Bsu36I CCTNAGG 1 cut(s) 382
BsuI GTATCC 2 cut(s) 1233, 1416
BsuRI GGCC 1 cut(s) 1071
BtgI CCRYGG 3 cut(s) 555, 581, 697
BtsCI GGATG 1 cut(s) 616
BtsIMutI CAGTG 1 cut(s) 1008
Cac8I GCNNGC 5 cut(s) 324, 399, 464, 1314, 1352
CaiI CAGNNNCTG 1 cut(s) 125
CciI TCATGA 1 cut(s) 510
Cfr13I GGNCC 3 cut(s) 160, 387, 701
CseI GACGC 1 cut(s) 217
CviAII CATG 9 cut(s) 187, 463, 511, 556, 582, 1133, 1190, 1364, 1400
DdeI CTNAG 8 cut(s) 41, 176, 382, 813, 926, 1035, 1081, 1121
DpnI GATC 7 cut(s) 181, 379, 429, 509, 970, 1050, 1262
DpnII GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
DraI TTTAAA 1 cut(s) 171
DraIII CACNNNGTG 1 cut(s) 863
Eam1104I CTCTTC 8 cut(s) 79, 509, 579, 752, 771, 925, 1171, 1202
EarI CTCTTC 8 cut(s) 79, 509, 579, 752, 771, 925, 1171, 1202
EciI GGCGGA 1 cut(s) 752
Eco130I CCWWGG 5 cut(s) 555, 581, 732, 991, 1409
Eco24I GRGCYC 1 cut(s) 1314
Eco31I GGTCTC 1 cut(s) 913
Eco47I GGWCC 3 cut(s) 160, 387, 701
Eco57I CTGAAG 4 cut(s) 102, 546, 912, 1212
Eco81I CCTNAGG 1 cut(s) 382
Eco88I CYCGRG 1 cut(s) 500
Eco91I GGTNACC 1 cut(s) 800
EcoO65I GGTNACC 1 cut(s) 800
EcoRII CCWGG 2 cut(s) 466, 1335
EcoT14I CCWWGG 5 cut(s) 555, 581, 732, 991, 1409
EcoT38I GRGCYC 1 cut(s) 1314
ErhI CCWWGG 5 cut(s) 555, 581, 732, 991, 1409
FaeI CATG 9 cut(s) 190, 466, 514, 559, 585, 1136, 1193, 1367, 1403
FaqI GGGAC 6 cut(s) 160, 173, 292, 400, 600, 627
FatI CATG 9 cut(s) 186, 462, 510, 555, 581, 1132, 1189, 1363, 1399
FauNDI CATATG 1 cut(s) 1045
FbaI TGATCA 1 cut(s) 427
Fnu4HI GCNGC 2 cut(s) 743, 1032
FokI GGATG 1 cut(s) 603
FriOI GRGCYC 1 cut(s) 1314
Fsp4HI GCNGC 2 cut(s) 743, 1032
FspBI CTAG 6 cut(s) 108, 143, 212, 365, 693, 1368
GluI GCNGC 2 cut(s) 743, 1032
GsuI CTGGAG 1 cut(s) 546
HaeIII GGCC 1 cut(s) 1071
HapII CCGG 5 cut(s) 194, 455, 705, 875, 1064
HgaI GACGC 1 cut(s) 217
Hin1I GRCGYC 1 cut(s) 228
Hin1II CATG 9 cut(s) 190, 466, 514, 559, 585, 1136, 1193, 1367, 1403
HindIII AAGCTT 2 cut(s) 173, 635
HinfI GANTC 8 cut(s) 43, 59, 215, 808, 1037, 1136, 1232, 1249
HpaII CCGG 5 cut(s) 194, 455, 705, 875, 1064
HphI GGTGA 1 cut(s) 1037
Hpy166II GTNNAC 2 cut(s) 701, 1196
Hpy188I TCNGA 9 cut(s) 220, 672, 752, 892, 1084, 1231, 1237, 1361, 1387
Hpy188III TCNNGA 7 cut(s) 91, 415, 500, 502, 511, 631, 1111
Hpy8I GTNNAC 2 cut(s) 701, 1196
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 4 cut(s) 368, 1236, 1259, 1382
HpyCH4III ACNGT 7 cut(s) 100, 343, 491, 952, 1177, 1219, 1321
HpyCH4IV ACGT 2 cut(s) 1087, 1293
HpyCH4V TGCA 5 cut(s) 242, 917, 1093, 1183, 1399
HpyF10VI GCNNNNNNNGC 1 cut(s) 1077
HpyF3I CTNAG 8 cut(s) 41, 176, 382, 813, 926, 1035, 1081, 1121
HpySE526I ACGT 2 cut(s) 1087, 1293
Hsp92I GRCGYC 1 cut(s) 228
Hsp92II CATG 9 cut(s) 190, 466, 514, 559, 585, 1136, 1193, 1367, 1403
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
LguI GCTCTTC 2 cut(s) 752, 925
LmnI GCTCC 7 cut(s) 109, 355, 565, 682, 739, 1154, 1268
Lsp1109I GCAGC 2 cut(s) 754, 1018
MaeI CTAG 6 cut(s) 108, 143, 212, 365, 693, 1368
MaeII ACGT 2 cut(s) 1087, 1293
MaeIII GTNAC 5 cut(s) 202, 337, 800, 946, 1321
MalI GATC 7 cut(s) 181, 379, 429, 509, 970, 1050, 1262
MboI GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
MfeI CAATTG 3 cut(s) 267, 771, 912
MflI RGATCY 2 cut(s) 179, 377
MhlI GDGCHC 1 cut(s) 1314
MluCI AATT 8 cut(s) 267, 495, 771, 912, 1002, 1016, 1104, 1328
MlyI GAGTC 4 cut(s) 52, 68, 1046, 1241
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 8 cut(s) 150, 277, 361, 391, 452, 597, 870, 1061
MroXI GAANNNNTTC 1 cut(s) 780
MseI TTAA 3 cut(s) 170, 482, 657
MslI CAYNNNNRTG 1 cut(s) 1188
MspI CCGG 5 cut(s) 194, 455, 705, 875, 1064
MspR9I CCNGG 7 cut(s) 195, 456, 468, 705, 875, 1065, 1337
MunI CAATTG 3 cut(s) 267, 771, 912
Mva1269I GAATGC 1 cut(s) 986
MvaI CCWGG 2 cut(s) 468, 1337
MwoI GCNNNNNNNGC 1 cut(s) 1077
NciI CCSGG 5 cut(s) 195, 456, 705, 875, 1065
NcoI CCATGG 2 cut(s) 555, 581
NdeI CATATG 1 cut(s) 1045
NdeII GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
NlaIII CATG 9 cut(s) 190, 466, 514, 559, 585, 1136, 1193, 1367, 1403
NlaIV GGNNCC 7 cut(s) 161, 379, 388, 561, 703, 997, 1270
NmuCI GTSAC 1 cut(s) 946
NspI RCATGY 2 cut(s) 466, 1367
PaeI GCATGC 1 cut(s) 466
PaeR7I CTCGAG 1 cut(s) 500
PagI TCATGA 1 cut(s) 510
PciSI GCTCTTC 2 cut(s) 752, 925
PcsI WCGNNNNNNNCGW 1 cut(s) 1269
PctI GAATGC 1 cut(s) 986
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 4 cut(s) 215, 808, 1136, 1249
PfoI TCCNGGA 1 cut(s) 1063
PkrI GCNGC 2 cut(s) 744, 1033
PleI GAGTC 4 cut(s) 51, 67, 1045, 1240
PpsI GAGTC 4 cut(s) 51, 67, 1045, 1240
Psp6I CCWGG 2 cut(s) 466, 1335
PspEI GGTNACC 1 cut(s) 800
PspGI CCWGG 2 cut(s) 466, 1335
PspN4I GGNNCC 7 cut(s) 161, 379, 388, 561, 703, 997, 1270
PspPI GGNCC 3 cut(s) 160, 387, 701
PstI CTGCAG 1 cut(s) 1095
PstNI CAGNNNCTG 1 cut(s) 125
PsuI RGATCY 2 cut(s) 179, 377
RseI CAYNNNNRTG 1 cut(s) 1188
SapI GCTCTTC 2 cut(s) 752, 925
SaqAI TTAA 3 cut(s) 170, 482, 657
SatI GCNGC 2 cut(s) 743, 1032
Sau3AI GATC 7 cut(s) 179, 377, 427, 507, 968, 1048, 1260
Sau96I GGNCC 3 cut(s) 160, 387, 701
SchI GAGTC 4 cut(s) 52, 68, 1046, 1241
ScrFI CCNGG 7 cut(s) 195, 456, 468, 705, 875, 1065, 1337
SduI GDGCHC 1 cut(s) 1314
SfcI CTRYAG 2 cut(s) 126, 1091
Sfr274I CTCGAG 1 cut(s) 500
SinI GGWCC 3 cut(s) 160, 387, 701
SlaI CTCGAG 1 cut(s) 500
SmiMI CAYNNNNRTG 1 cut(s) 1188
SmlI CTYRAG 3 cut(s) 500, 1109, 1199
SmoI CTYRAG 3 cut(s) 500, 1109, 1199
SphI GCATGC 1 cut(s) 466
Sse9I AATT 8 cut(s) 267, 495, 771, 912, 1002, 1016, 1104, 1328
SsiI CCGC 4 cut(s) 535, 737, 896, 976
SspMI CTAG 6 cut(s) 108, 143, 212, 365, 693, 1368
StyD4I CCNGG 7 cut(s) 193, 454, 466, 703, 873, 1063, 1335
StyI CCWWGG 5 cut(s) 555, 581, 732, 991, 1409
TaaI ACNGT 7 cut(s) 100, 343, 491, 952, 1177, 1219, 1321
TaiI ACGT 2 cut(s) 1090, 1296
TaqI TCGA 6 cut(s) 20, 77, 92, 416, 501, 1263
TaqII GACCGA 1 cut(s) 177
TasI AATT 8 cut(s) 267, 495, 771, 912, 1002, 1016, 1104, 1328
TfiI GAWTC 4 cut(s) 215, 808, 1136, 1249
Tru1I TTAA 3 cut(s) 170, 482, 657
Tru9I TTAA 3 cut(s) 170, 482, 657
TscAI CASTG 1 cut(s) 1015
TseFI GTSAC 1 cut(s) 946
TseI GCWGC 2 cut(s) 742, 1031
Tsp45I GTSAC 1 cut(s) 946
TspDTI ATGAA 5 cut(s) 527, 945, 1149, 1158, 1262
TspGWI ACGGA 1 cut(s) 296
TspRI CASTG 1 cut(s) 1015
VpaK11BI GGWCC 3 cut(s) 160, 387, 701
XapI RAATTY 3 cut(s) 495, 1104, 1328
XceI RCATGY 2 cut(s) 466, 1367
XcmI CCANNNNNNNNNTGG 1 cut(s) 1333
XhoI CTCGAG 1 cut(s) 500
XmnI GAANNNNTTC 1 cut(s) 780
XspI CTAG 6 cut(s) 108, 143, 212, 365, 693, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.