Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005848

Physical Location & Seq

Genomic Coordinates Reverse (-)

15098438 .. 15102619

Gene Structure 4182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G126700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGAGTGTGTGTCTTCTATTCTCTCACCGACCGCGGTGAAATTCTCTTATCCAATGCTTGCTTCAATGGCTGCCTCTGCAGCTACTGTTCCTTCTTTCTCATTGAAGTCCATGGCCTATGGACAGCGAAGAACAGCTACTTCAAAACACTCGGCAAAACCCACTAAAACCCTCTCTGCAACAACAGCGACAAACCCAGTTTCTAGTACAACCAGCACAAGCACAGCCACAGCCACATCGCTACCTCCCAAGAAGGTTCTGGTTCCAATTGGGTTGGGGACAGAAGAAATGGAAGCTGTCATTATAGTTGATGTTCTGCGCCGAGCTGGTGCTGATGTCACTGTGGCCTCGGTGGAGCCACAGCTCCAAATTGAAGCTTCTTGTGGTACTAAATTGGTTGCTGATACCTCCATTTCCTCATGTTCTGATCAAATTTTTGATCTCGTGGCTTTGCCGGGAGGAATGCCTGGCTCGGTGAGGTTAAGAGACTGCGCAGCACTGCAGAAAATTACAAGCAAACAGGCTGAGGAAAGGAGGTTATATGGAGCTATATGTGCTGCTCCAGCAGTAACACTTCTACCATGGGGTCTTCTAAGGAGAAGGCAGACTACATGCCACCCTGCATTCATGCACAAGCTTCCAACGTTCTGGGCAGTCAAATCAAACATTCAAGTTTCAGAAGGGCTCACAACAAGCCGTGGCCCTGGAACTTCTTATGTTTTTGCCCTATGCCTAGTTGAACAGCTATTTGGGGAATCTGTTGCCAAGGGAATTGGAGAATCATTGTTGGTGTGCCTCGATGATGATAACTCTAGAAAGGAAGAGTTCAACAAAGTTGAGTGGTCTTTTGATCACATCCCTCATGTTCTGATTCCAGTTGCAAATGGTTCTGAAGAGATTGAAGTAGTAACTATTGTAGATATTCTACGACGAGCAAAGGTCGATGTAGTAGTTGCTTCAGTTGAAAAATCAGTGCAGATTTTGGCATCTCAAGGCACCAAAATCATTGCTGACAAGTTGATTGGTGTTGCTGCAGAGTTAACTTATGATTTAATCATTCTTCCGGGAGGAACTGCTGGTGCTGAGCGGTTAAACAAATCTAGGATTCTAAAGAACCTCCTCAAAGAACAAGAACTAGCTGGAAGAATATACGGAGCAGTCTGTTCCTCACCGGGAATCCTACATAGACAAGGCTTACTGAAGGGTAAGAAAGCCACGGCTCACCCTTCCATTGTAAGCAAGCTGACAAACGAAGTGGTAAATGGCACCAAAGTAGTGATTGATGGTAAAGTGATTACAAGCAGGGGACTTTCTACGGTCACAGACTTTGCATTGGTTATTGTGAGCAAACTATTTGGTCATGCAAGGGCAAGAAGTGTTGCAGAAGGCCTTGTTTATGAGTACCCGAGGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DJ-1_PfpI

Protein Analysis

472

Amino Acids

50.11

Weight (kDa)

9.09

Isoelectric Point (pI)

44.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34020 AT4G34020 AT4G34020 AT4G34020
fragaria_vesca	FvH4_2g05880 FvH4_2g05880 FvH4_2g05880 FvH4_2g05880 FvH4_2g05880 FvH4_2g05880
malus_domestica	MD05G1082200.v1.1
prunus_persica	Prupe.8G126700_v2.0.a1 Prupe.8G126700_v2.0.a1
pyrus_communis	pycom03g18750 pycom05g07700
rosa_chinensis	RchiOBHm_Chr6g0257661
rosa_laevigata	RLG00000014715
rosa_multiflora	Rmu_co8071652.1_g000001 Rmu_co8413389.1_g000001 Rmu_sc0026590.1_g000001
rosa_rugosa	Rorug05G0569400 Rorug05G0569500 Rorug05G0569600
rosa_samantha	Rh6AG086100 Rh6BG080200 Rh6CG075200 Rh6DG072100
rosa_wichuraiana	Rw6G007710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	493
AccB1I	GGYRCC	2 cut(s)	995, 1265
AccBSI	CCGCTC	1 cut(s)	1087
AccII	CGCG	1 cut(s)	35
AciI	CCGC	3 cut(s)	33, 35, 1087
AclI	AACGTT	1 cut(s)	644
AcsI	RAATTY	2 cut(s)	41, 432
AcuI	CTGAAG	3 cut(s)	912, 942, 1220
AfaI	GTAC	3 cut(s)	208, 388, 1403
AgsI	TTSAA	9 cut(s)	66, 106, 144, 374, 671, 740, 829, 902, 965
AjnI	CCWGG	2 cut(s)	466, 703
AjuI	GAANNNNNNNTTGG	4 cut(s)	46, 78, 732, 764
Alw26I	GTCTC	1 cut(s)	480
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	1 cut(s)	1405
AoxI	GGCC	4 cut(s)	114, 345, 700, 1387
ApeKI	GCWGC	5 cut(s)	71, 80, 494, 557, 1031
ApoI	RAATTY	2 cut(s)	41, 432
AspLEI	GCGC	2 cut(s)	321, 494
AspS9I	GGNCC	1 cut(s)	701
AsuC2I	CCSGG	3 cut(s)	456, 1065, 1173
AsuHPI	GGTGA	5 cut(s)	18, 49, 487, 1161, 1214
AvaI	CYCGRG	1 cut(s)	1405
BanI	GGYRCC	2 cut(s)	995, 1265
BanII	GRGCYC	1 cut(s)	687
BarI	GAAGNNNNNNTAC	4 cut(s)	121, 153, 592, 624
BauI	CACGAG	1 cut(s)	443
BbsI	GAAGAC	2 cut(s)	6, 581
BbvCI	CCTCAGC	1 cut(s)	525
BbvI	GCAGC	5 cut(s)	58, 92, 506, 544, 1018
BccI	CCATC	1 cut(s)	1277
BceAI	ACGGC	2 cut(s)	681, 1233
BciT130I	CCWGG	2 cut(s)	468, 705
BclI	TGATCA	2 cut(s)	427, 850
BcnI	CCSGG	3 cut(s)	456, 1065, 1173
BcoDI	GTCTC	1 cut(s)	480
BfaI	CTAG	5 cut(s)	204, 734, 813, 1101, 1136
BfmI	CTRYAG	3 cut(s)	78, 500, 1032
BisI	GCNGC	5 cut(s)	72, 81, 495, 558, 1032
BlpI	GCTNAGC	1 cut(s)	1083
BlsI	GCNGC	5 cut(s)	73, 82, 496, 559, 1033
Bme1390I	CCNGG	5 cut(s)	456, 468, 705, 1065, 1173
BmeT110I	CYCGRG	1 cut(s)	1405
BmgT120I	GGNCC	1 cut(s)	701
BmiI	GGNNCC	4 cut(s)	264, 357, 997, 1267
BmrFI	CCNGG	5 cut(s)	456, 468, 705, 1065, 1173
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	1 cut(s)	995
BmuI	ACTGGG	1 cut(s)	191
BpiI	GAAGAC	2 cut(s)	6, 581
BpmI	CTGGAG	1 cut(s)	546
Bpu10I	CCTNAGC	1 cut(s)	525
Bpu1102I	GCTNAGC	1 cut(s)	1083
BpuEI	CTTGAG	1 cut(s)	975
BpuMI	CCSGG	3 cut(s)	456, 1065, 1173
BsaJI	CCNNGG	9 cut(s)	33, 111, 348, 581, 697, 703, 765, 1215, 1406
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bse1I	ACTGG	2 cut(s)	197, 875
Bse3DI	GCAATG	1 cut(s)	1005
BseBI	CCWGG	2 cut(s)	468, 705
BseDI	CCNNGG	9 cut(s)	33, 111, 348, 581, 697, 703, 765, 1215, 1406
BseGI	GGATG	1 cut(s)	855
BseMI	GCAATG	1 cut(s)	1005
BseMII	CTCAG	2 cut(s)	516, 1074
BseNI	ACTGG	2 cut(s)	197, 875
BseRI	GAGGAG	1 cut(s)	1109
BseXI	GCAGC	5 cut(s)	58, 92, 506, 544, 1018
BsgI	GTGCAG	1 cut(s)	995
Bsh1236I	CGCG	1 cut(s)	35
Bsh1285I	CGRYCG	1 cut(s)	33
BshFI	GGCC	4 cut(s)	116, 347, 702, 1389
BshNI	GGYRCC	2 cut(s)	995, 1265
BsiEI	CGRYCG	1 cut(s)	33
BsiHKCI	CYCGRG	1 cut(s)	1405
BsiSI	CCGG	3 cut(s)	455, 1064, 1172
BslFI	GGGAC	2 cut(s)	292, 1320
BsmAI	GTCTC	1 cut(s)	480
BsmFI	GGGAC	2 cut(s)	292, 1320
BsmI	GAATGC	2 cut(s)	468, 623
BsnI	GGCC	4 cut(s)	116, 347, 702, 1389
BsoBI	CYCGRG	1 cut(s)	1405
Bsp1286I	GDGCHC	1 cut(s)	687
Bsp143I	GATC	3 cut(s)	427, 439, 850
Bsp1720I	GCTNAGC	1 cut(s)	1083
Bsp19I	CCATGG	2 cut(s)	111, 581
BspACI	CCGC	3 cut(s)	33, 35, 1087
BspANI	GGCC	4 cut(s)	116, 347, 702, 1389
BspCNI	CTCAG	2 cut(s)	517, 1075
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	4 cut(s)	264, 357, 997, 1267
BspMAI	CTGCAG	3 cut(s)	82, 504, 1036
BspT107I	GGYRCC	2 cut(s)	995, 1265
BsrBI	CCGCTC	1 cut(s)	1087
BsrDI	GCAATG	1 cut(s)	1005
BsrI	ACTGG	2 cut(s)	197, 875
BssECI	CCNNGG	9 cut(s)	33, 111, 348, 581, 697, 703, 765, 1215, 1406
BssMI	GATC	3 cut(s)	427, 439, 850
BssSI	CACGAG	1 cut(s)	443
BssT1I	CCWWGG	3 cut(s)	111, 581, 765
Bst2BI	CACGAG	1 cut(s)	443
Bst2UI	CCWGG	2 cut(s)	468, 705
Bst4CI	ACNGT	3 cut(s)	88, 343, 1318
Bst6I	CTCTTC	2 cut(s)	816, 888
BstC8I	GCNNGC	2 cut(s)	60, 1241
BstDEI	CTNAG	3 cut(s)	525, 593, 1083
BstDSI	CCRYGG	5 cut(s)	33, 111, 581, 697, 1215
BstF5I	GGATG	1 cut(s)	855
BstFNI	CGCG	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	321, 494
BstKTI	GATC	3 cut(s)	430, 442, 853
BstMAI	GTCTC	1 cut(s)	480
BstMBI	GATC	3 cut(s)	427, 439, 850
BstMCI	CGRYCG	1 cut(s)	33
BstMWI	GCNNNNNNNGC	6 cut(s)	68, 77, 80, 185, 554, 563
BstNI	CCWGG	2 cut(s)	468, 705
BstNSI	RCATGY	1 cut(s)	615
BstSCI	CCNGG	5 cut(s)	454, 466, 703, 1063, 1171
BstSFI	CTRYAG	3 cut(s)	78, 500, 1032
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	5 cut(s)	58, 92, 506, 544, 1018
BstV2I	GAAGAC	2 cut(s)	6, 581
BstXI	CCANNNNNNTGG	1 cut(s)	648
BsuRI	GGCC	4 cut(s)	116, 347, 702, 1389
BtgI	CCRYGG	5 cut(s)	33, 111, 581, 697, 1215
BtgZI	GCGATG	1 cut(s)	222
BtsCI	GGATG	1 cut(s)	855
BtsI	GCAGTG	1 cut(s)	497
BtsIMutI	CAGTG	3 cut(s)	339, 497, 978
Cac8I	GCNNGC	2 cut(s)	60, 1241
CaiI	CAGNNNCTG	1 cut(s)	86
CfoI	GCGC	2 cut(s)	321, 494
Cfr13I	GGNCC	1 cut(s)	701
Cfr42I	CCGCGG	1 cut(s)	36
Csp6I	GTAC	3 cut(s)	207, 387, 1402
CspCI	CAANNNNNGTGG	2 cut(s)	1236, 1271
CviAII	CATG	7 cut(s)	112, 420, 582, 612, 628, 863, 1361
CviQI	GTAC	3 cut(s)	207, 387, 1402
DdeI	CTNAG	3 cut(s)	525, 593, 1083
DpnI	GATC	3 cut(s)	429, 441, 852
DpnII	GATC	3 cut(s)	427, 439, 850
Eam1104I	CTCTTC	2 cut(s)	816, 888
EarI	CTCTTC	2 cut(s)	816, 888
Eco130I	CCWWGG	3 cut(s)	111, 581, 765
Eco147I	AGGCCT	1 cut(s)	1389
Eco24I	GRGCYC	1 cut(s)	687
Eco57I	CTGAAG	3 cut(s)	912, 942, 1220
Eco88I	CYCGRG	1 cut(s)	1405
EcoRII	CCWGG	2 cut(s)	466, 703
EcoT14I	CCWWGG	3 cut(s)	111, 581, 765
EcoT38I	GRGCYC	1 cut(s)	687
ErhI	CCWWGG	3 cut(s)	111, 581, 765
FaeI	CATG	7 cut(s)	115, 423, 585, 615, 631, 866, 1364
FaqI	GGGAC	2 cut(s)	292, 1320
FatI	CATG	7 cut(s)	111, 419, 581, 611, 627, 862, 1360
FbaI	TGATCA	2 cut(s)	427, 850
Fnu4HI	GCNGC	5 cut(s)	72, 81, 495, 558, 1032
FokI	GGATG	1 cut(s)	842
FriOI	GRGCYC	1 cut(s)	687
Fsp4HI	GCNGC	5 cut(s)	72, 81, 495, 558, 1032
FspBI	CTAG	5 cut(s)	204, 734, 813, 1101, 1136
FspI	TGCGCA	1 cut(s)	493
GlaI	GCGC	2 cut(s)	320, 493
GluI	GCNGC	5 cut(s)	72, 81, 495, 558, 1032
GsuI	CTGGAG	1 cut(s)	546
HaeIII	GGCC	4 cut(s)	116, 347, 702, 1389
HapII	CCGG	3 cut(s)	455, 1064, 1172
HhaI	GCGC	2 cut(s)	321, 494
Hin1II	CATG	7 cut(s)	115, 423, 585, 615, 631, 866, 1364
Hin6I	GCGC	2 cut(s)	319, 492
HinP1I	GCGC	2 cut(s)	319, 492
HincII	GTYRAC	1 cut(s)	1041
HindII	GTYRAC	1 cut(s)	1041
HindIII	AAGCTT	2 cut(s)	375, 635
HinfI	GANTC	5 cut(s)	755, 779, 871, 1105, 1176
HpaI	GTTAAC	1 cut(s)	1041
HpaII	CCGG	3 cut(s)	455, 1064, 1172
HphI	GGTGA	5 cut(s)	18, 49, 487, 1161, 1214
Hpy166II	GTNNAC	1 cut(s)	1041
Hpy188I	TCNGA	4 cut(s)	427, 679, 870, 892
Hpy188III	TCNNGA	1 cut(s)	813
Hpy8I	GTNNAC	1 cut(s)	1041
Hpy99I	CGWCG	1 cut(s)	933
HpyAV	CCTTC	7 cut(s)	102, 247, 594, 674, 1195, 1236, 1379
HpyCH4III	ACNGT	3 cut(s)	88, 343, 1318
HpyCH4IV	ACGT	1 cut(s)	644
HpyF10VI	GCNNNNNNNGC	6 cut(s)	68, 77, 80, 185, 554, 563
HpyF3I	CTNAG	3 cut(s)	525, 593, 1083
HpySE526I	ACGT	1 cut(s)	644
Hsp92II	CATG	7 cut(s)	115, 423, 585, 615, 631, 866, 1364
HspAI	GCGC	2 cut(s)	319, 492
Ksp22I	TGATCA	2 cut(s)	427, 850
KspAI	GTTAAC	1 cut(s)	1041
KspI	CCGCGG	1 cut(s)	36
Kzo9I	GATC	3 cut(s)	427, 439, 850
LmnI	GCTCC	5 cut(s)	355, 369, 545, 565, 1154
Lsp1109I	GCAGC	5 cut(s)	58, 92, 506, 544, 1018
LweI	GCATC	1 cut(s)	995
MaeI	CTAG	5 cut(s)	204, 734, 813, 1101, 1136
MaeII	ACGT	1 cut(s)	644
MaeIII	GTNAC	4 cut(s)	337, 568, 907, 1318
MalI	GATC	3 cut(s)	429, 441, 852
MbiI	CCGCTC	1 cut(s)	1087
MboI	GATC	3 cut(s)	427, 439, 850
MboII	GAAGA	8 cut(s)	6, 141, 296, 581, 833, 905, 1052, 1155
MfeI	CAATTG	1 cut(s)	267
MhlI	GDGCHC	1 cut(s)	687
MluCI	AATT	7 cut(s)	41, 267, 369, 392, 432, 507, 771
MmeI	TCCRAC	1 cut(s)	665
MseI	TTAA	5 cut(s)	482, 1040, 1052, 1091, 1414
MspA1I	CMGCKG	1 cut(s)	35
MspI	CCGG	3 cut(s)	455, 1064, 1172
MspR9I	CCNGG	5 cut(s)	456, 468, 705, 1065, 1173
MunI	CAATTG	1 cut(s)	267
Mva1269I	GAATGC	2 cut(s)	468, 623
MvaI	CCWGG	2 cut(s)	468, 705
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	6 cut(s)	68, 77, 80, 185, 554, 563
NciI	CCSGG	3 cut(s)	456, 1065, 1173
NcoI	CCATGG	2 cut(s)	111, 581
NdeII	GATC	3 cut(s)	427, 439, 850
NlaIII	CATG	7 cut(s)	115, 423, 585, 615, 631, 866, 1364
NlaIV	GGNNCC	4 cut(s)	264, 357, 997, 1267
NmeAIII	GCCGAG	2 cut(s)	131, 347
NmuCI	GTSAC	2 cut(s)	337, 1318
NsbI	TGCGCA	1 cut(s)	493
NspI	RCATGY	1 cut(s)	615
PceI	AGGCCT	1 cut(s)	1389
PctI	GAATGC	2 cut(s)	468, 623
PfeI	GAWTC	5 cut(s)	755, 779, 871, 1105, 1176
PfoI	TCCNGGA	1 cut(s)	1063
PkrI	GCNGC	5 cut(s)	73, 82, 496, 559, 1033
Psp1406I	AACGTT	1 cut(s)	644
Psp6I	CCWGG	2 cut(s)	466, 703
PspGI	CCWGG	2 cut(s)	466, 703
PspN4I	GGNNCC	4 cut(s)	264, 357, 997, 1267
PspPI	GGNCC	1 cut(s)	701
PstI	CTGCAG	3 cut(s)	82, 504, 1036
PstNI	CAGNNNCTG	1 cut(s)	86
RsaI	GTAC	3 cut(s)	208, 388, 1403
RsaNI	GTAC	3 cut(s)	207, 387, 1402
SacII	CCGCGG	1 cut(s)	36
SaqAI	TTAA	5 cut(s)	482, 1040, 1052, 1091, 1414
SatI	GCNGC	5 cut(s)	72, 81, 495, 558, 1032
Sau3AI	GATC	3 cut(s)	427, 439, 850
Sau96I	GGNCC	1 cut(s)	701
ScrFI	CCNGG	5 cut(s)	456, 468, 705, 1065, 1173
SduI	GDGCHC	1 cut(s)	687
SfaNI	GCATC	1 cut(s)	995
SfcI	CTRYAG	3 cut(s)	78, 500, 1032
Sfr303I	CCGCGG	1 cut(s)	36
SgrBI	CCGCGG	1 cut(s)	36
SmlI	CTYRAG	1 cut(s)	990
SmoI	CTYRAG	1 cut(s)	990
Sse9I	AATT	7 cut(s)	41, 267, 369, 392, 432, 507, 771
SseBI	AGGCCT	1 cut(s)	1389
SsiI	CCGC	3 cut(s)	33, 35, 1087
SspMI	CTAG	5 cut(s)	204, 734, 813, 1101, 1136
StuI	AGGCCT	1 cut(s)	1389
StyD4I	CCNGG	5 cut(s)	454, 466, 703, 1063, 1171
StyI	CCWWGG	3 cut(s)	111, 581, 765
TaaI	ACNGT	3 cut(s)	88, 343, 1318
TaiI	ACGT	1 cut(s)	647
TaqI	TCGA	2 cut(s)	798, 942
TasI	AATT	7 cut(s)	41, 267, 369, 392, 432, 507, 771
TatI	WGTACW	1 cut(s)	206
TfiI	GAWTC	5 cut(s)	755, 779, 871, 1105, 1176
Tru1I	TTAA	5 cut(s)	482, 1040, 1052, 1091, 1414
Tru9I	TTAA	5 cut(s)	482, 1040, 1052, 1091, 1414
TscAI	CASTG	3 cut(s)	346, 504, 978
TseFI	GTSAC	2 cut(s)	337, 1318
TseI	GCWGC	5 cut(s)	71, 80, 494, 557, 1031
Tsp45I	GTSAC	2 cut(s)	337, 1318
TspDTI	ATGAA	1 cut(s)	616
TspGWI	ACGGA	1 cut(s)	1167
TspRI	CASTG	3 cut(s)	346, 504, 978
XapI	RAATTY	2 cut(s)	41, 432
XbaI	TCTAGA	1 cut(s)	812
XceI	RCATGY	1 cut(s)	615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	256
XspI	CTAG	5 cut(s)	204, 734, 813, 1101, 1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.