pycom05g07700

DJ-1/PfpI family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
10566881 .. 10570210
3330 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g07700.4

Sequence Viewer

Length: 1380 bp
ATGGAGTCTCTGTCTCCGGTTCTCTCACCGACCGCTGTGAAATTCTGCTATCCGAAGCTCGCTTCAATGGCTGCCTCTGCAGCCACTCTTCCTTCGTTCTCAGTTACCTCCATGGCCTCTGCACAGAGAAGAACACCTACTTCAATACACTCTGCAAAACCCACTAAAACCCTCTCCGCAACAGCAACAACAAACCCAATTTCGGTGCCTCCCAAGAAGGTTCTGGTTCCAATTGGGTATGGGACGGAAGAAATGGAAGCTGTCATTATGGTTGATGTTCTGCGCCGAGCTGGTGCCGATGTTACTGTGGCCTCCGTGGAGCCGCAGCTCCAGATTGAAGCTTCTTGCGGTACTAAACTGATTGCTGACACCTCCATTTCCTCGTGTTCCGATCAAATTTTTGATCTTGTGGCTTTGCCGGGAGGAATGCCGGGATCGGTGAGGCTAAGAGACTGTGCAGCACTCCAGGAAATTACAAGAAAGCAGGCTGAGGAAAGTAGGTTATATGGAGCCATAAGTGCTGCTCCGGCAGTAGCACTTCTGCCATGGGGTCTTTTAAAGAGAAGGCAGACTACTTGCCACCCTGCATTCATGCACAAGCTTCCGACATTCTGGGCAGTCAAATCAAACATTCAGGTGTCAGGAGGACTCACAACAAGCCGTGGCCCTGGAACTTCTTATGGGTTTGCCCTGTGCCTAGTAGAACAGCTATTTGGGGAATCCGTTGCCAAGGAAATTGGAGAATCGCTGTTGATCTGTCCTGATGATGAGAAATCTAAAAAGGAGGAGTTTAATGACGTTGAATGGTCTTTTGATCATATCCCTCGAGTTCTGATTCCAGTTGCAAATGGATCTGAAGATATTGAAGTAGTAACTATTGTAGATATTCTGAGACGAGCACATGTGGATGTTATAGTTGCTTCAGTTGAAAAATCTGTGCGGATTTTGGGATCTCAAGGCACCAAAATCATTGCTGACAAGTTGATTGGTGTTGCTGCAGAGTCAACATACGACTTAATCATTCTTCCGGGAGGAAATGCTGGGGCTGAGCGGCTAAGCAAATCTAGGATTCTAAAGAACCTCCTCAAAGAACAAGAACTAGCTGGAAGAGTATATGGAGCGGTCTGTTCATCGCCAGCAATCCTACATAAACAAGGCTTATTGAAGGGTAAGAAAGCCACCGCTCATCCTTCCATTGTAAGCAAACTCACAAACGAAGTGATAAATGGCACCAAAGTAGTTATCGATGGTAAACTGATTACAAGCAGAGGACTTTCTACCGTCACAGACTTTGCGTTAGCTATTGTGAGCAAACTACATGGTCATGCAAGGGCAAGAAGTGTTGCAGAAGGCCTCGTTTATGATTACCCGAGGAGTTAG

Protein Analysis

460

Amino Acids

48.84

Weight (kDa)

8.87

Isoelectric Point (pI)

44.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 205, 293, 959, 1229
AccBSI CCGCTC 3 cut(s) 1051, 1121, 1184
AciI CCGC 8 cut(s) 33, 177, 323, 348, 940, 1051, 1121, 1182
AclWI GGATC 3 cut(s) 442, 859, 958
AcsI RAATTY 2 cut(s) 41, 396
AcuI CTGAAG 2 cut(s) 876, 906
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 1 cut(s) 202
AflIII ACRYGT 1 cut(s) 901
AgsI TTSAA 7 cut(s) 66, 144, 338, 803, 866, 929, 1165
AjnI CCWGG 2 cut(s) 465, 667
AjuI GAANNNNNNNTTGG 2 cut(s) 696, 728
AluBI AGCT 9 cut(s) 58, 260, 290, 328, 341, 601, 709, 1103, 1301
AluI AGCT 9 cut(s) 58, 260, 290, 328, 341, 601, 709, 1103, 1301
Alw21I GWGCWC 1 cut(s) 901
Alw26I GTCTC 4 cut(s) 12, 18, 444, 886
AlwI GGATC 3 cut(s) 442, 859, 958
Ama87I CYCGRG 2 cut(s) 825, 1369
AoxI GGCC 4 cut(s) 114, 309, 664, 1351
ApeKI GCWGC 6 cut(s) 71, 80, 325, 458, 521, 995
ApoI RAATTY 2 cut(s) 41, 396
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 1 cut(s) 665
AsuC2I CCSGG 3 cut(s) 420, 432, 1029
AsuHPI GGTGA 2 cut(s) 18, 451
AvaI CYCGRG 2 cut(s) 825, 1369
BanI GGYRCC 4 cut(s) 205, 293, 959, 1229
BarI GAAGNNNNNNTAC 4 cut(s) 121, 153, 556, 588
BauI CACGAG 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 901
BbvCI CCTCAGC 1 cut(s) 489
BbvI GCAGC 6 cut(s) 58, 92, 337, 470, 508, 982
BccI CCATC 1 cut(s) 1241
BceAI ACGGC 1 cut(s) 645
BciT130I CCWGG 2 cut(s) 467, 669
BclI TGATCA 1 cut(s) 814
BcnI CCSGG 3 cut(s) 420, 432, 1029
BcoDI GTCTC 4 cut(s) 12, 18, 444, 886
BfaI CTAG 3 cut(s) 698, 1065, 1100
BfmI CTRYAG 2 cut(s) 78, 996
BisI GCNGC 8 cut(s) 72, 81, 323, 326, 459, 522, 996, 1052
BlpI GCTNAGC 2 cut(s) 1047, 1055
BlsI GCNGC 8 cut(s) 73, 82, 324, 327, 460, 523, 997, 1053
Bme1390I CCNGG 5 cut(s) 420, 432, 467, 669, 1029
BmeT110I CYCGRG 2 cut(s) 825, 1369
BmgT120I GGNCC 1 cut(s) 665
BmiI GGNNCC 7 cut(s) 207, 228, 295, 321, 511, 961, 1231
BmrFI CCNGG 5 cut(s) 420, 432, 467, 669, 1029
BpmI CTGGAG 2 cut(s) 314, 449
Bpu10I CCTNAGC 1 cut(s) 489
Bpu1102I GCTNAGC 2 cut(s) 1047, 1055
BpuEI CTTGAG 1 cut(s) 939
BpuMI CCSGG 3 cut(s) 420, 432, 1029
Bsa29I ATCGAT 1 cut(s) 1245
BsaJI CCNNGG 7 cut(s) 111, 315, 545, 661, 667, 729, 1370
BsaWI WCCGGW 1 cut(s) 16
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 202
Bse1I ACTGG 1 cut(s) 839
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 2 cut(s) 467, 669
BseCI ATCGAT 1 cut(s) 1245
BseDI CCNNGG 7 cut(s) 111, 315, 545, 661, 667, 729, 1370
BseGI GGATG 2 cut(s) 913, 1186
BseLI CCNNNNNNNGG 1 cut(s) 202
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 4 cut(s) 114, 480, 881, 1038
BseNI ACTGG 1 cut(s) 839
BseRI GAGGAG 2 cut(s) 800, 1073
BseXI GCAGC 6 cut(s) 58, 92, 337, 470, 508, 982
BseYI CCCAGC 1 cut(s) 1040
BsgI GTGCAG 2 cut(s) 105, 477
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 4 cut(s) 116, 311, 666, 1353
BshNI GGYRCC 4 cut(s) 205, 293, 959, 1229
BshVI ATCGAT 1 cut(s) 1245
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 901
BsiHKCI CYCGRG 2 cut(s) 825, 1369
BsiSI CCGG 5 cut(s) 17, 419, 431, 527, 1028
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 1 cut(s) 202
BsmAI GTCTC 4 cut(s) 12, 18, 444, 886
BsmBI CGTCTC 1 cut(s) 886
BsmFI GGGAC 1 cut(s) 256
BsmI GAATGC 2 cut(s) 432, 587
BsnI GGCC 4 cut(s) 116, 311, 666, 1353
BsoBI CYCGRG 2 cut(s) 825, 1369
Bsp1286I GDGCHC 1 cut(s) 901
Bsp143I GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
Bsp1720I GCTNAGC 2 cut(s) 1047, 1055
Bsp19I CCATGG 2 cut(s) 111, 545
BspACI CCGC 8 cut(s) 33, 177, 323, 348, 940, 1051, 1121, 1182
BspANI GGCC 4 cut(s) 116, 311, 666, 1353
BspCNI CTCAG 4 cut(s) 113, 481, 882, 1039
BspDI ATCGAT 1 cut(s) 1245
BspLI GGNNCC 7 cut(s) 207, 228, 295, 321, 511, 961, 1231
BspMAI CTGCAG 2 cut(s) 82, 1000
BspPI GGATC 3 cut(s) 442, 859, 958
BspT107I GGYRCC 4 cut(s) 205, 293, 959, 1229
BsrBI CCGCTC 3 cut(s) 1051, 1121, 1184
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 1 cut(s) 839
BssECI CCNNGG 7 cut(s) 111, 315, 545, 661, 667, 729, 1370
BssMI GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
BssSI CACGAG 1 cut(s) 382
BssT1I CCWWGG 3 cut(s) 111, 545, 729
Bst2BI CACGAG 1 cut(s) 382
Bst2UI CCWGG 2 cut(s) 467, 669
Bst4CI ACNGT 3 cut(s) 307, 455, 1282
Bst6I CTCTTC 2 cut(s) 93, 1102
BstC8I GCNNGC 3 cut(s) 60, 486, 1137
BstDEI CTNAG 6 cut(s) 100, 446, 489, 890, 1047, 1055
BstDSI CCRYGG 4 cut(s) 111, 315, 545, 661
BstF5I GGATG 2 cut(s) 913, 1186
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 7 cut(s) 394, 406, 437, 756, 817, 854, 953
BstMAI GTCTC 4 cut(s) 12, 18, 444, 886
BstMBI GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 5 cut(s) 68, 77, 80, 518, 527
BstNI CCWGG 2 cut(s) 467, 669
BstNSI RCATGY 1 cut(s) 905
BstSCI CCNGG 5 cut(s) 418, 430, 465, 667, 1027
BstSFI CTRYAG 2 cut(s) 78, 996
BstV1I GCAGC 6 cut(s) 58, 92, 337, 470, 508, 982
BstX2I RGATCY 2 cut(s) 851, 950
BstYI RGATCY 2 cut(s) 851, 950
Bsu15I ATCGAT 1 cut(s) 1245
BsuRI GGCC 4 cut(s) 116, 311, 666, 1353
BsuTUI ATCGAT 1 cut(s) 1245
BtgI CCRYGG 4 cut(s) 111, 315, 545, 661
BtgZI GCGATG 1 cut(s) 1116
BtsCI GGATG 2 cut(s) 913, 1186
Cac8I GCNNGC 3 cut(s) 60, 486, 1137
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 1 cut(s) 665
ClaI ATCGAT 1 cut(s) 1245
Csp6I GTAC 1 cut(s) 351
CviAII CATG 6 cut(s) 112, 546, 592, 902, 1319, 1325
CviQI GTAC 1 cut(s) 351
DdeI CTNAG 6 cut(s) 100, 446, 489, 890, 1047, 1055
DpnI GATC 7 cut(s) 393, 405, 436, 755, 816, 853, 952
DpnII GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
DraI TTTAAA 1 cut(s) 558
Eam1104I CTCTTC 2 cut(s) 93, 1102
EarI CTCTTC 2 cut(s) 93, 1102
Eco130I CCWWGG 3 cut(s) 111, 545, 729
Eco147I AGGCCT 1 cut(s) 1353
Eco57I CTGAAG 2 cut(s) 876, 906
Eco88I CYCGRG 2 cut(s) 825, 1369
EcoRII CCWGG 2 cut(s) 465, 667
EcoT14I CCWWGG 3 cut(s) 111, 545, 729
ErhI CCWWGG 3 cut(s) 111, 545, 729
Esp3I CGTCTC 1 cut(s) 886
FaeI CATG 6 cut(s) 115, 549, 595, 905, 1322, 1328
FaqI GGGAC 1 cut(s) 256
FatI CATG 6 cut(s) 111, 545, 591, 901, 1318, 1324
FbaI TGATCA 1 cut(s) 814
Fnu4HI GCNGC 8 cut(s) 72, 81, 323, 326, 459, 522, 996, 1052
FokI GGATG 2 cut(s) 920, 1173
Fsp4HI GCNGC 8 cut(s) 72, 81, 323, 326, 459, 522, 996, 1052
FspBI CTAG 3 cut(s) 698, 1065, 1100
GlaI GCGC 1 cut(s) 284
GluI GCNGC 8 cut(s) 72, 81, 323, 326, 459, 522, 996, 1052
GsaI CCCAGC 1 cut(s) 1044
GsuI CTGGAG 2 cut(s) 314, 449
HaeIII GGCC 4 cut(s) 116, 311, 666, 1353
HapII CCGG 5 cut(s) 17, 419, 431, 527, 1028
HhaI GCGC 1 cut(s) 285
Hin1II CATG 6 cut(s) 115, 549, 595, 905, 1322, 1328
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HincII GTYRAC 1 cut(s) 1005
HindII GTYRAC 1 cut(s) 1005
HindIII AAGCTT 2 cut(s) 339, 599
HinfI GANTC 7 cut(s) 5, 648, 719, 743, 835, 1001, 1069
HpaII CCGG 5 cut(s) 17, 419, 431, 527, 1028
HphI GGTGA 2 cut(s) 18, 451
Hpy166II GTNNAC 2 cut(s) 1005, 1253
Hpy188I TCNGA 6 cut(s) 54, 391, 606, 834, 856, 891
Hpy188III TCNNGA 3 cut(s) 331, 642, 761
Hpy8I GTNNAC 2 cut(s) 1005, 1253
HpyAV CCTTC 6 cut(s) 102, 211, 558, 1159, 1200, 1343
HpyCH4III ACNGT 3 cut(s) 307, 455, 1282
HpyCH4IV ACGT 1 cut(s) 798
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 77, 80, 518, 527
HpyF3I CTNAG 6 cut(s) 100, 446, 489, 890, 1047, 1055
HpySE526I ACGT 1 cut(s) 798
Hsp92II CATG 6 cut(s) 115, 549, 595, 905, 1322, 1328
HspAI GCGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 814
Kzo9I GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
LmnI GCTCC 5 cut(s) 319, 333, 509, 529, 1118
Lsp1109I GCAGC 6 cut(s) 58, 92, 337, 470, 508, 982
MaeI CTAG 3 cut(s) 698, 1065, 1100
MaeII ACGT 1 cut(s) 798
MaeIII GTNAC 4 cut(s) 103, 301, 871, 1282
MalI GATC 7 cut(s) 393, 405, 436, 755, 816, 853, 952
MbiI CCGCTC 3 cut(s) 1051, 1121, 1184
MboI GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
MboII GAAGA 6 cut(s) 80, 141, 260, 869, 1016, 1119
MfeI CAATTG 1 cut(s) 231
MflI RGATCY 2 cut(s) 851, 950
MhlI GDGCHC 1 cut(s) 901
MluCI AATT 6 cut(s) 41, 198, 231, 396, 471, 735
MlyI GAGTC 3 cut(s) 14, 642, 1010
MmeI TCCRAC 1 cut(s) 629
MseI TTAA 3 cut(s) 557, 792, 1016
MslI CAYNNNNRTG 3 cut(s) 635, 906, 1323
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 5 cut(s) 17, 419, 431, 527, 1028
MspR9I CCNGG 5 cut(s) 420, 432, 467, 669, 1029
MunI CAATTG 1 cut(s) 231
Mva1269I GAATGC 2 cut(s) 432, 587
MvaI CCWGG 2 cut(s) 467, 669
MwoI GCNNNNNNNGC 5 cut(s) 68, 77, 80, 518, 527
NciI CCSGG 3 cut(s) 420, 432, 1029
NcoI CCATGG 2 cut(s) 111, 545
NdeII GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
NlaIII CATG 6 cut(s) 115, 549, 595, 905, 1322, 1328
NlaIV GGNNCC 7 cut(s) 207, 228, 295, 321, 511, 961, 1231
NmeAIII GCCGAG 1 cut(s) 311
NmuCI GTSAC 1 cut(s) 1282
NspI RCATGY 1 cut(s) 905
PaeR7I CTCGAG 1 cut(s) 825
PceI AGGCCT 1 cut(s) 1353
PciI ACATGT 1 cut(s) 901
PctI GAATGC 2 cut(s) 432, 587
PfeI GAWTC 4 cut(s) 719, 743, 835, 1069
PfoI TCCNGGA 2 cut(s) 465, 1027
PkrI GCNGC 8 cut(s) 73, 82, 324, 327, 460, 523, 997, 1053
PleI GAGTC 3 cut(s) 13, 642, 1009
PpsI GAGTC 3 cut(s) 13, 642, 1009
PscI ACATGT 1 cut(s) 901
Psp6I CCWGG 2 cut(s) 465, 667
PspFI CCCAGC 1 cut(s) 1040
PspGI CCWGG 2 cut(s) 465, 667
PspN4I GGNNCC 7 cut(s) 207, 228, 295, 321, 511, 961, 1231
PspPI GGNCC 1 cut(s) 665
PspXI VCTCGAGB 1 cut(s) 825
PstI CTGCAG 2 cut(s) 82, 1000
PsuI RGATCY 2 cut(s) 851, 950
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
RseI CAYNNNNRTG 3 cut(s) 635, 906, 1323
SaqAI TTAA 3 cut(s) 557, 792, 1016
SatI GCNGC 8 cut(s) 72, 81, 323, 326, 459, 522, 996, 1052
Sau3AI GATC 7 cut(s) 391, 403, 434, 753, 814, 851, 950
Sau96I GGNCC 1 cut(s) 665
SchI GAGTC 3 cut(s) 14, 642, 1010
ScrFI CCNGG 5 cut(s) 420, 432, 467, 669, 1029
SduI GDGCHC 1 cut(s) 901
SfcI CTRYAG 2 cut(s) 78, 996
Sfr274I CTCGAG 1 cut(s) 825
SlaI CTCGAG 1 cut(s) 825
SmiMI CAYNNNNRTG 3 cut(s) 635, 906, 1323
SmlI CTYRAG 2 cut(s) 825, 954
SmoI CTYRAG 2 cut(s) 825, 954
Sse9I AATT 6 cut(s) 41, 198, 231, 396, 471, 735
SseBI AGGCCT 1 cut(s) 1353
SsiI CCGC 8 cut(s) 33, 177, 323, 348, 940, 1051, 1121, 1182
SspMI CTAG 3 cut(s) 698, 1065, 1100
StuI AGGCCT 1 cut(s) 1353
StyD4I CCNGG 5 cut(s) 418, 430, 465, 667, 1027
StyI CCWWGG 3 cut(s) 111, 545, 729
TaaI ACNGT 3 cut(s) 307, 455, 1282
TaiI ACGT 1 cut(s) 801
TaqI TCGA 2 cut(s) 826, 1245
TasI AATT 6 cut(s) 41, 198, 231, 396, 471, 735
TauI GCSGC 2 cut(s) 325, 1054
TfiI GAWTC 4 cut(s) 719, 743, 835, 1069
Tru1I TTAA 3 cut(s) 557, 792, 1016
Tru9I TTAA 3 cut(s) 557, 792, 1016
TseFI GTSAC 1 cut(s) 1282
TseI GCWGC 6 cut(s) 71, 80, 325, 458, 521, 995
Tsp45I GTSAC 1 cut(s) 1282
TspDTI ATGAA 2 cut(s) 580, 1119
TspGWI ACGGA 3 cut(s) 260, 304, 712
XapI RAATTY 2 cut(s) 41, 396
XceI RCATGY 1 cut(s) 905
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XhoI CTCGAG 1 cut(s) 825
XspI CTAG 3 cut(s) 698, 1065, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.