Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010933

Physical Location & Seq

Genomic Coordinates Reverse (-)

17422538 .. 17423953

Gene Structure 1416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G36950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGAGTGGATTCGTAGAGAAACGATTGGTCACGGAAGCTTCTCCACCGTTAGTTTAGCAACTACCTCTGGAAGTTCTTCTAAAGCGTTTCCATCGTTAATGGCTGTGAAATCTTCCGGAGTTGTTTGCTCCGCCGCGTTACGAAACGAGAGAGATGTTCTTGATGATCTCGGTGACTGTTCGGAGATCGTGCGGTGTTTTGGTGAAGGAAGGACGGTGGAGAACGGAGAAGAGATCTATAATCTGTTTCTTGAGTATGCTTCCGGTGGTAGTTTAGCTGATCGGATTAAAAGCTCCGGTGAAGCGTTGCCGGAGTTTGAAGTGAGGAGATTCACGAGATCGATTGTTAAAGGATTGTGTCATATTCATGGTAATGGTTTCACTCATTGTGATATAAAGCTTGAGAATGTTTTGGTTTTTGGTGATGGAGATGTGAAGATATCTGATTTCGGGTTAGCGAAACGGAGGAGTGGTGAGGTTTGTGTTGAGATTAGAGGAACACCGTTGTATATGGCACCGGAGTCTGTGAATCACGGCGAGTTTGAATCTCCGGCGGATATTTGGGCTTTGGGATGCTCTGTTGTTGAGATGTCTAGTGGTAAAACGGCATGGTGTTTGGAGGATGGTGTTATGAATAATGTTATGTCTTTATTGGTTCGTATTGGTTCCGGCGATGAAGTTCCGAGGATTCCGGTGGAATTGTCGGAGGAAGGTAAAGATTTCGTGAGCAAGTGTTTTGTTAAAAACGCCGCGGAGAGATGGACGGCTGAGATGCTTTTGGATCATCCATTCTTAGCCGTTGATGATGAGAGTGGCGAAGAAGACGAAGCTTGTTCGGTTTCACCGAGGAATCCATTTGATTTTCCCGGTTGGAATTCGGTTCAATCTCCGGTTAATGATTCGGTTATGTTTGGTTCATTGGTAGGTTCGCCGGAGGAAAGGATTAGTGGTTTGGTGAGTGAGAAGGTACCTGATTGGTCGGTGTCGTGTGATTGGGTCAACGTCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

336

Amino Acids

36.64

Weight (kDa)

4.64

Isoelectric Point (pI)

52.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	6 - 265	8.4e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 259	4.4e-27	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010933)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50310 AT4G36950 AT5G67080
fragaria_vesca	FvH4_1g16150
malus_domestica	MD02G1173600.v1.1 MD15G1285100.v1.1
prunus_persica	Prupe.2G016400_v2.0.a1 Prupe.3G259700_v2.0.a1 Prupe.7G132100_v2.0.a1
pyrus_communis	pycom02g14000
rosa_chinensis	RchiOBHm_Chr2g0105831
rosa_laevigata	RLG00000017463
rosa_multiflora	Rmu_sc0004386.1_g000026
rosa_roxburghii	Rroxscaffold_2G00137860
rosa_rugosa	Rorug02G0130700
rosa_samantha	Rh2AG181800 Rh2BG191600 Rh2CG186200 Rh2DG188200
rosa_wichuraiana	Rw2G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	967
AccB1I	GGYRCC	2 cut(s)	514, 967
AccII	CGCG	2 cut(s)	137, 752
AccIII	TCCGGA	1 cut(s)	116
AciI	CCGC	6 cut(s)	132, 135, 193, 554, 750, 752
AclWI	GGATC	1 cut(s)	789
AcsI	RAATTY	1 cut(s)	874
AfaI	GTAC	1 cut(s)	969
AgsI	TTSAA	3 cut(s)	320, 545, 884
AluBI	AGCT	5 cut(s)	39, 278, 294, 400, 830
AluI	AGCT	5 cut(s)	39, 278, 294, 400, 830
AlwI	GGATC	1 cut(s)	789
Aor13HI	TCCGGA	1 cut(s)	116
ApoI	RAATTY	1 cut(s)	874
Asp700I	GAANNNNTTC	1 cut(s)	76
Asp718I	GGTACC	1 cut(s)	967
AsuC2I	CCSGG	1 cut(s)	867
AsuHPI	GGTGA	7 cut(s)	185, 215, 311, 434, 485, 834, 967
BanI	GGYRCC	2 cut(s)	514, 967
BauI	CACGAG	1 cut(s)	334
BbsI	GAAGAC	1 cut(s)	828
BccI	CCATC	4 cut(s)	100, 419, 617, 753
BceAI	ACGGC	4 cut(s)	550, 621, 780, 782
BcnI	CCSGG	1 cut(s)	867
BfaI	CTAG	1 cut(s)	594
BglII	AGATCT	1 cut(s)	234
BisI	GCNGC	2 cut(s)	135, 750
BlsI	GCNGC	2 cut(s)	136, 751
Bme1390I	CCNGG	1 cut(s)	867
BmiI	GGNNCC	3 cut(s)	516, 667, 969
BmrFI	CCNGG	1 cut(s)	867
BmsI	GCATC	2 cut(s)	563, 762
BpiI	GAAGAC	1 cut(s)	828
BpuEI	CTTGAG	2 cut(s)	272, 422
BpuMI	CCSGG	1 cut(s)	867
Bsa29I	ATCGAT	1 cut(s)	341
BsaJI	CCNNGG	3 cut(s)	683, 750, 845
BsaWI	WCCGGW	6 cut(s)	116, 263, 296, 517, 691, 889
BsaXI	ACNNNNNCTCC	2 cut(s)	457, 487
BseAI	TCCGGA	1 cut(s)	116
BseCI	ATCGAT	1 cut(s)	341
BseDI	CCNNGG	3 cut(s)	683, 750, 845
BseGI	GGATG	3 cut(s)	578, 628, 784
BseMII	CTCAG	1 cut(s)	759
BseRI	GAGGAG	2 cut(s)	340, 481
Bsh1236I	CGCG	2 cut(s)	137, 752
BshNI	GGYRCC	2 cut(s)	514, 967
BshVI	ATCGAT	1 cut(s)	341
Bsp13I	TCCGGA	1 cut(s)	116
Bsp143I	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
BspACI	CCGC	6 cut(s)	132, 135, 193, 554, 750, 752
BspCNI	CTCAG	1 cut(s)	760
BspDI	ATCGAT	1 cut(s)	341
BspEI	TCCGGA	1 cut(s)	116
BspFNI	CGCG	2 cut(s)	137, 752
BspLI	GGNNCC	3 cut(s)	516, 667, 969
BspPI	GGATC	1 cut(s)	789
BspT107I	GGYRCC	2 cut(s)	514, 967
BssECI	CCNNGG	3 cut(s)	683, 750, 845
BssMI	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
BssSI	CACGAG	1 cut(s)	334
Bst2BI	CACGAG	1 cut(s)	334
Bst4CI	ACNGT	4 cut(s)	49, 179, 217, 504
Bst6I	CTCTTC	1 cut(s)	225
BstDEI	CTNAG	2 cut(s)	768, 793
BstDSI	CCRYGG	1 cut(s)	750
BstF5I	GGATG	3 cut(s)	578, 628, 784
BstFNI	CGCG	2 cut(s)	137, 752
BstKTI	GATC	6 cut(s)	169, 189, 237, 283, 341, 784
BstMBI	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
BstSCI	CCNGG	1 cut(s)	865
BstUI	CGCG	2 cut(s)	137, 752
BstV2I	GAAGAC	1 cut(s)	828
BstX2I	RGATCY	1 cut(s)	234
BstYI	RGATCY	1 cut(s)	234
Bsu15I	ATCGAT	1 cut(s)	341
BsuTUI	ATCGAT	1 cut(s)	341
BtgI	CCRYGG	1 cut(s)	750
BtgZI	GCGATG	1 cut(s)	687
BtsCI	GGATG	3 cut(s)	578, 628, 784
Cfr42I	CCGCGG	1 cut(s)	753
ClaI	ATCGAT	1 cut(s)	341
Csp6I	GTAC	1 cut(s)	968
CviAII	CATG	2 cut(s)	368, 609
CviJI	RGCY	9 cut(s)	39, 104, 278, 294, 400, 566, 767, 797, 830
CviKI_1	RGCY	9 cut(s)	39, 104, 278, 294, 400, 566, 767, 797, 830
CviQI	GTAC	1 cut(s)	968
DdeI	CTNAG	2 cut(s)	768, 793
DpnI	GATC	6 cut(s)	168, 188, 236, 282, 340, 783
DpnII	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
Eam1104I	CTCTTC	1 cut(s)	225
EarI	CTCTTC	1 cut(s)	225
EciI	GGCGGA	2 cut(s)	121, 569
Eco32I	GATATC	1 cut(s)	441
EcoRI	GAATTC	1 cut(s)	874
EcoRV	GATATC	1 cut(s)	441
FaeI	CATG	2 cut(s)	371, 612
FatI	CATG	2 cut(s)	367, 608
Fnu4HI	GCNGC	2 cut(s)	135, 750
FokI	GGATG	3 cut(s)	585, 635, 771
Fsp4HI	GCNGC	2 cut(s)	135, 750
FspBI	CTAG	1 cut(s)	594
GluI	GCNGC	2 cut(s)	135, 750
Hin1II	CATG	2 cut(s)	371, 612
HincII	GTYRAC	1 cut(s)	1000
HindII	GTYRAC	1 cut(s)	1000
HindIII	AAGCTT	3 cut(s)	37, 398, 828
HinfI	GANTC	8 cut(s)	10, 330, 521, 529, 545, 688, 850, 899
HphI	GGTGA	7 cut(s)	185, 215, 311, 434, 485, 834, 967
Hpy166II	GTNNAC	1 cut(s)	1000
Hpy188I	TCNGA	5 cut(s)	184, 285, 445, 684, 706
Hpy188III	TCNNGA	6 cut(s)	69, 117, 161, 251, 334, 724
Hpy8I	GTNNAC	1 cut(s)	1000
HpyAV	CCTTC	4 cut(s)	200, 204, 704, 958
HpyCH4III	ACNGT	4 cut(s)	49, 179, 217, 504
HpyCH4IV	ACGT	1 cut(s)	1002
HpyF3I	CTNAG	2 cut(s)	768, 793
HpySE526I	ACGT	1 cut(s)	1002
Hsp92II	CATG	2 cut(s)	371, 612
Kpn2I	TCCGGA	1 cut(s)	116
KpnI	GGTACC	1 cut(s)	971
KspI	CCGCGG	1 cut(s)	753
Kzo9I	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
LmnI	GCTCC	2 cut(s)	134, 299
LweI	GCATC	2 cut(s)	563, 762
MaeI	CTAG	1 cut(s)	594
MaeII	ACGT	1 cut(s)	1002
MaeIII	GTNAC	3 cut(s)	29, 138, 173
MalI	GATC	6 cut(s)	168, 188, 236, 282, 340, 783
MboI	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
MboII	GAAGA	6 cut(s)	69, 105, 242, 448, 830, 833
MflI	RGATCY	1 cut(s)	234
MluCI	AATT	2 cut(s)	698, 874
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	2 cut(s)	684, 851
MroI	TCCGGA	1 cut(s)	116
MroXI	GAANNNNTTC	1 cut(s)	76
MseI	TTAA	5 cut(s)	98, 288, 348, 741, 894
MslI	CAYNNNNRTG	2 cut(s)	366, 372
MspA1I	CMGCKG	1 cut(s)	752
MspR9I	CCNGG	1 cut(s)	867
MvnI	CGCG	2 cut(s)	137, 752
NciI	CCSGG	1 cut(s)	867
NdeII	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
NlaIII	CATG	2 cut(s)	371, 612
NlaIV	GGNNCC	3 cut(s)	516, 667, 969
NmuCI	GTSAC	2 cut(s)	29, 173
PcsI	WCGNNNNNNNCGW	1 cut(s)	842
PdmI	GAANNNNTTC	1 cut(s)	76
PfeI	GAWTC	7 cut(s)	10, 330, 529, 545, 688, 850, 899
PkrI	GCNGC	2 cut(s)	136, 751
PleI	GAGTC	1 cut(s)	529
PpsI	GAGTC	1 cut(s)	529
PspN4I	GGNNCC	3 cut(s)	516, 667, 969
PsuI	RGATCY	1 cut(s)	234
RsaI	GTAC	1 cut(s)	969
RsaNI	GTAC	1 cut(s)	968
RseI	CAYNNNNRTG	2 cut(s)	366, 372
SacII	CCGCGG	1 cut(s)	753
SaqAI	TTAA	5 cut(s)	98, 288, 348, 741, 894
SatI	GCNGC	2 cut(s)	135, 750
Sau3AI	GATC	6 cut(s)	166, 186, 234, 280, 338, 781
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	1 cut(s)	867
SfaNI	GCATC	2 cut(s)	563, 762
Sfr303I	CCGCGG	1 cut(s)	753
SgrBI	CCGCGG	1 cut(s)	753
SmiMI	CAYNNNNRTG	2 cut(s)	366, 372
SmlI	CTYRAG	2 cut(s)	251, 401
SmoI	CTYRAG	2 cut(s)	251, 401
Sse9I	AATT	2 cut(s)	698, 874
SsiI	CCGC	6 cut(s)	132, 135, 193, 554, 750, 752
SspMI	CTAG	1 cut(s)	594
StyD4I	CCNGG	1 cut(s)	865
TaaI	ACNGT	4 cut(s)	49, 179, 217, 504
TaiI	ACGT	1 cut(s)	1005
TaqI	TCGA	1 cut(s)	341
TasI	AATT	2 cut(s)	698, 874
TauI	GCSGC	2 cut(s)	137, 752
TfiI	GAWTC	7 cut(s)	10, 330, 529, 545, 688, 850, 899
Tru1I	TTAA	5 cut(s)	98, 288, 348, 741, 894
Tru9I	TTAA	5 cut(s)	98, 288, 348, 741, 894
TseFI	GTSAC	2 cut(s)	29, 173
Tsp45I	GTSAC	2 cut(s)	29, 173
TspDTI	ATGAA	4 cut(s)	356, 647, 690, 906
TspGWI	ACGGA	3 cut(s)	48, 240, 478
XapI	RAATTY	1 cut(s)	874
XmnI	GAANNNNTTC	1 cut(s)	76
XspI	CTAG	1 cut(s)	594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.