Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010933

Physical Location & Seq

Genomic Coordinates Reverse (-)

1546510 .. 1546990

Gene Structure 481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G016400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 411 bp

ATGGCAAGTGGAAAACTGATATGGGATCACAGCCCTGGTGTGAATATTTTCAAGCTCTTGATGAGAATCAGAAGAGATGAGTTGCCTCAAATTCCAGAGAACTTGTGCGAAGAAGGAAAAGATTTTCTGGGGAAGTGTTTTGTGAAGGACTTGAGAAAGTTGAAGAGCTATTTTGGTGGGTCACCATTTCCGAGAGGCAATTTTGATTTCCTAGATTGGGTTTCGATGGCAAGTTACGGAATTTCACTAGGATTTGGGGATTTTTTCGGATTTGGGGTTTTGGATTTGGGAATTTCACCAGAAGAAGCCCAAGCCCTCCCACATCCTCTTCAACACTGTCTTCTTCTCTCGGCGACAGAGCCAGCGACAACGACCCTACAGACACAACCACTTGCTTGGCCACTACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

137

Amino Acids

15.17

Weight (kDa)

5.53

Isoelectric Point (pI)

44.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010933)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50310 AT4G36950 AT5G67080
fragaria_vesca	FvH4_1g16150
malus_domestica	MD02G1173600.v1.1 MD15G1285100.v1.1
prunus_persica	Prupe.2G016400_v2.0.a1 Prupe.3G259700_v2.0.a1 Prupe.7G132100_v2.0.a1
pyrus_communis	pycom02g14000
rosa_chinensis	RchiOBHm_Chr2g0105831
rosa_laevigata	RLG00000017463
rosa_multiflora	Rmu_sc0004386.1_g000026
rosa_roxburghii	Rroxscaffold_2G00137860
rosa_rugosa	Rorug02G0130700
rosa_samantha	Rh2AG181800 Rh2BG191600 Rh2CG186200 Rh2DG188200
rosa_wichuraiana	Rw2G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	33
AcoI	YGGCCR	1 cut(s)	398
AcsI	RAATTY	3 cut(s)	90, 240, 291
AfiI	CCNNNNNNNGG	1 cut(s)	217
AgsI	TTSAA	3 cut(s)	52, 163, 332
AjnI	CCWGG	1 cut(s)	34
AluBI	AGCT	2 cut(s)	55, 168
AluI	AGCT	2 cut(s)	55, 168
AlwI	GGATC	1 cut(s)	33
AoxI	GGCC	1 cut(s)	398
ApoI	RAATTY	3 cut(s)	90, 240, 291
Asp700I	GAANNNNTTC	1 cut(s)	47
AsuHPI	GGTGA	2 cut(s)	174, 288
BalI	TGGCCA	1 cut(s)	400
BbsI	GAAGAC	1 cut(s)	332
BccI	CCATC	1 cut(s)	220
BciT130I	CCWGG	1 cut(s)	36
BfaI	CTAG	2 cut(s)	212, 248
BfmI	CTRYAG	2 cut(s)	377, 407
Bme1390I	CCNGG	1 cut(s)	36
BmrFI	CCNGG	1 cut(s)	36
BpiI	GAAGAC	1 cut(s)	332
BpuEI	CTTGAG	1 cut(s)	172
BsaBI	GATNNNNATC	1 cut(s)	65
BsaJI	CCNNGG	1 cut(s)	34
Bsc4I	CCNNNNNNNGG	1 cut(s)	217
Bse8I	GATNNNNATC	1 cut(s)	65
BseBI	CCWGG	1 cut(s)	36
BseDI	CCNNGG	1 cut(s)	34
BseGI	GGATG	1 cut(s)	322
BseJI	GATNNNNATC	1 cut(s)	65
BseLI	CCNNNNNNNGG	1 cut(s)	217
BshFI	GGCC	1 cut(s)	400
BslI	CCNNNNNNNGG	1 cut(s)	217
BsnI	GGCC	1 cut(s)	400
Bsp143I	GATC	1 cut(s)	25
BspANI	GGCC	1 cut(s)	400
BspPI	GGATC	1 cut(s)	33
BspQI	GCTCTTC	1 cut(s)	158
BssECI	CCNNGG	1 cut(s)	34
BssMI	GATC	1 cut(s)	25
Bst2UI	CCWGG	1 cut(s)	36
Bst4CI	ACNGT	2 cut(s)	338, 408
Bst6I	CTCTTC	3 cut(s)	67, 158, 333
BstC8I	GCNNGC	1 cut(s)	363
BstEII	GGTNACC	1 cut(s)	180
BstF5I	GGATG	1 cut(s)	322
BstKTI	GATC	1 cut(s)	28
BstMBI	GATC	1 cut(s)	25
BstNI	CCWGG	1 cut(s)	36
BstPI	GGTNACC	1 cut(s)	180
BstSCI	CCNGG	1 cut(s)	34
BstSFI	CTRYAG	2 cut(s)	377, 407
BstV2I	GAAGAC	1 cut(s)	332
BstXI	CCANNNNNNTGG	1 cut(s)	396
BsuRI	GGCC	1 cut(s)	400
BtsCI	GGATG	1 cut(s)	322
BtsIMutI	CAGTG	1 cut(s)	334
Cac8I	GCNNGC	1 cut(s)	363
CviJI	RGCY	7 cut(s)	33, 55, 168, 308, 314, 361, 400
CviKI_1	RGCY	7 cut(s)	33, 55, 168, 308, 314, 361, 400
DpnI	GATC	1 cut(s)	27
DpnII	GATC	1 cut(s)	25
EaeI	YGGCCR	1 cut(s)	398
Eam1104I	CTCTTC	3 cut(s)	67, 158, 333
EarI	CTCTTC	3 cut(s)	67, 158, 333
Eco91I	GGTNACC	1 cut(s)	180
EcoO65I	GGTNACC	1 cut(s)	180
EcoRII	CCWGG	1 cut(s)	34
FaiI	YATR	1 cut(s)	22
FokI	GGATG	1 cut(s)	309
FspBI	CTAG	2 cut(s)	212, 248
HaeIII	GGCC	1 cut(s)	400
HinfI	GANTC	1 cut(s)	66
HphI	GGTGA	2 cut(s)	174, 288
Hpy188I	TCNGA	3 cut(s)	71, 192, 269
Hpy188III	TCNNGA	2 cut(s)	58, 95
HpyAV	CCTTC	2 cut(s)	107, 139
HpyCH4III	ACNGT	2 cut(s)	338, 408
Kzo9I	GATC	1 cut(s)	25
LguI	GCTCTTC	1 cut(s)	158
LpnPI	CCDG	6 cut(s)	21, 48, 108, 113, 312, 375
MaeI	CTAG	2 cut(s)	212, 248
MaeIII	GTNAC	2 cut(s)	180, 233
MalI	GATC	1 cut(s)	27
MboI	GATC	1 cut(s)	25
MboII	GAAGA	7 cut(s)	84, 122, 175, 314, 320, 332, 335
MlsI	TGGCCA	1 cut(s)	400
MluCI	AATT	4 cut(s)	90, 199, 240, 291
MluNI	TGGCCA	1 cut(s)	400
MnlI	CCTC	4 cut(s)	96, 188, 326, 336
Mox20I	TGGCCA	1 cut(s)	400
MroXI	GAANNNNTTC	1 cut(s)	47
MscI	TGGCCA	1 cut(s)	400
Msp20I	TGGCCA	1 cut(s)	400
MspR9I	CCNGG	1 cut(s)	36
MvaI	CCWGG	1 cut(s)	36
NdeII	GATC	1 cut(s)	25
NmeAIII	GCCGAG	1 cut(s)	329
NmuCI	GTSAC	1 cut(s)	180
PciSI	GCTCTTC	1 cut(s)	158
PdmI	GAANNNNTTC	1 cut(s)	47
PfeI	GAWTC	1 cut(s)	66
Psp6I	CCWGG	1 cut(s)	34
PspEI	GGTNACC	1 cut(s)	180
PspGI	CCWGG	1 cut(s)	34
SapI	GCTCTTC	1 cut(s)	158
Sau3AI	GATC	1 cut(s)	25
ScrFI	CCNGG	1 cut(s)	36
SetI	ASST	2 cut(s)	57, 170
SfcI	CTRYAG	2 cut(s)	377, 407
SmlI	CTYRAG	1 cut(s)	151
SmoI	CTYRAG	1 cut(s)	151
Sse9I	AATT	4 cut(s)	90, 199, 240, 291
SspI	AATATT	1 cut(s)	46
SspMI	CTAG	2 cut(s)	212, 248
StyD4I	CCNGG	1 cut(s)	34
TaaI	ACNGT	2 cut(s)	338, 408
TaqI	TCGA	1 cut(s)	224
TasI	AATT	4 cut(s)	90, 199, 240, 291
TfiI	GAWTC	1 cut(s)	66
TscAI	CASTG	1 cut(s)	341
TseFI	GTSAC	1 cut(s)	180
Tsp45I	GTSAC	1 cut(s)	180
TspGWI	ACGGA	1 cut(s)	252
TspRI	CASTG	1 cut(s)	341
XapI	RAATTY	3 cut(s)	90, 240, 291
XmnI	GAANNNNTTC	1 cut(s)	47
XspI	CTAG	2 cut(s)	212, 248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.