MD15G1285100.v1.1

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
25929489 .. 25930541
1053 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1285100.v1.1.491

Sequence Viewer

Length: 1053 bp
ATGGAGTGGATTCGCGGTAAAGAAATCGGCCGGGGAAGCTTCGCCACCATCTACACAGCAAAATCCACCAGCCCATCTTCTCATCTTCCGCCGCTGGTGGCCCTGAAGGCGTCTGAATCCGGCTACTCTGATTCGCTCAAGAACGAGAAGCAAGTCCTCGACCAAATCGGCTCCTGCCCACAAATCATCCGCTGCTTCGGCGCCGATCACTCCGTTGAGAACGGCGAGAAATTCTACAACTTGGTTCTGGAGTACGCCAGCGGCGGCACTCTGGCGGATGAGCTCAAAAGAAACGGCGGACGCTTGCCGGAATTTGATGTTCAACGCCACACAAAGTCGGTGCTCAGAGGCCTTGAATTCATCCACGCAAAAGGGTTCGTCCACTGCGACTTGAAGCTTCAGAATGTCCTGGTTTTCGCCGACGGCGCGGCGAAAATTGCCGACTTCGGGCTGGCGAAGAAAGCAGGGGAATCGGATAACAAGGTCGAAGTCAGGGGAACGCCACTGTACATGGCGCCGGAATCTGTTAACGACAATGAATACGAGTCCTGCTCCGACGTCTGGGCTCTCGGGTGTTTGGTGGCGGAGATGGCGAGCGGGAAACCGGTGTGGGATCACAACCCCGGCGTGAACATGTTCAAGCTTCTGATGACGATTGGAGGCGACGAGTTGCCGCAAATCCCAGAGGAGTTGAGTGAAGACGGCAAAGATTTTGTTTCCAAGTGTTTTGTGAAGGATCCCAGACAGAGATGGACGGCTGAGATGCTTCTTGAGCACGCGTTTGTTTCCGGCGACGATCACACTGTTCTATCGGAGGAGAAGGCGCAGCTGTCGGCGTCTCCGAGAGGCCCATTCGATTTTCCGGATTGGGTTTCGGTGGCTAGTTCAGAAATTTCTCCACAATTTGTGGAATGGTCTGGGAAAAATTTGGACTCCGAGTTCGATTGGTCGTCGAGAAAGAGTTTCGTTCCGGCGGCGGATCGGTTGCGGCAGTTGGCGACGGAGGAGAAACCCAATTGGTCGTTCTCTGAAGATTGGGTAACAATTATGTGA

Protein Analysis

351

Amino Acids

38.85

Weight (kDa)

4.96

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 5 - 262 2.5e-57 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 258 3.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010933)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 561
AccB1I GGYRCC 2 cut(s) 200, 514
AccBSI CCGCTC 1 cut(s) 597
AccII CGCG 3 cut(s) 15, 428, 779
AccIII TCCGGA 1 cut(s) 862
AclWI GGATC 4 cut(s) 621, 731, 744, 987
AcoI YGGCCR 1 cut(s) 28
AcsI RAATTY 5 cut(s) 230, 311, 356, 891, 925
AcuI CTGAAG 3 cut(s) 125, 383, 1050
AcyI GRCGYC 5 cut(s) 110, 201, 515, 558, 836
AfaI GTAC 2 cut(s) 254, 509
AfiI CCNNNNNNNGG 2 cut(s) 447, 561
AflIII ACRYGT 2 cut(s) 633, 777
AgeI ACCGGT 1 cut(s) 604
AgsI TTSAA 4 cut(s) 323, 356, 394, 640
AjnI CCWGG 1 cut(s) 408
AjuI GAANNNNNNNTTGG 2 cut(s) 1007, 1039
AloI GAACNNNNNNTCC 2 cut(s) 923, 955
AluBI AGCT 5 cut(s) 39, 283, 397, 643, 829
AluI AGCT 5 cut(s) 39, 283, 397, 643, 829
Alw21I GWGCWC 3 cut(s) 285, 345, 777
Alw26I GTCTC 1 cut(s) 843
AlwI GGATC 4 cut(s) 621, 731, 744, 987
Ama87I CYCGRG 1 cut(s) 569
Aor13HI TCCGGA 1 cut(s) 862
AoxI GGCC 4 cut(s) 28, 99, 349, 847
ApeKI GCWGC 2 cut(s) 192, 826
ApoI RAATTY 5 cut(s) 230, 311, 356, 891, 925
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
AsiGI ACCGGT 1 cut(s) 604
Asp700I GAANNNNTTC 1 cut(s) 635
AspLEI GCGC 4 cut(s) 203, 428, 517, 826
AspS9I GGNCC 2 cut(s) 100, 848
AsuC2I CCSGG 2 cut(s) 32, 624
AvaI CYCGRG 1 cut(s) 569
BamHI GGATCC 1 cut(s) 736
BanI GGYRCC 2 cut(s) 200, 514
BanII GRGCYC 2 cut(s) 285, 568
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 3 cut(s) 285, 345, 777
BbvI GCAGC 2 cut(s) 179, 838
BccI CCATC 4 cut(s) 56, 82, 583, 744
BceAI ACGGC 5 cut(s) 238, 310, 439, 718, 771
BcgI CGANNNNNNTGC 2 cut(s) 453, 487
BciT130I CCWGG 1 cut(s) 410
BcnI CCSGG 2 cut(s) 32, 624
BcoDI GTCTC 1 cut(s) 843
BfaI CTAG 1 cut(s) 882
BfoI RGCGCY 2 cut(s) 204, 518
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 9 cut(s) 92, 193, 262, 265, 429, 674, 827, 975, 989
BlsI GCNGC 9 cut(s) 93, 194, 263, 266, 430, 675, 828, 976, 990
Bme1390I CCNGG 3 cut(s) 32, 410, 624
BmeT110I CYCGRG 1 cut(s) 569
BmgT120I GGNCC 2 cut(s) 100, 848
BmiI GGNNCC 4 cut(s) 172, 202, 516, 738
BmrFI CCNGG 3 cut(s) 32, 410, 624
BmsI GCATC 1 cut(s) 753
BpiI GAAGAC 1 cut(s) 705
BplI GAGNNNNNCTC 2 cut(s) 536, 568
BpmI CTGGAG 1 cut(s) 269
BpuEI CTTGAG 2 cut(s) 122, 791
BpuMI CCSGG 2 cut(s) 32, 624
BsaHI GRCGYC 5 cut(s) 110, 201, 515, 558, 836
BsaJI CCNNGG 2 cut(s) 31, 622
BsaWI WCCGGW 2 cut(s) 604, 862
Bsc4I CCNNNNNNNGG 2 cut(s) 447, 561
Bse118I RCCGGY 1 cut(s) 604
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 1 cut(s) 410
BseDI CCNNGG 2 cut(s) 31, 622
BseGI GGATG 3 cut(s) 186, 283, 360
BseLI CCNNNNNNNGG 2 cut(s) 447, 561
BseMII CTCAG 2 cut(s) 358, 750
BseRI GAGGAG 3 cut(s) 701, 830, 1019
BseX3I CGGCCG 1 cut(s) 28
BseXI GCAGC 2 cut(s) 179, 838
Bsh1236I CGCG 3 cut(s) 15, 428, 779
Bsh1285I CGRYCG 1 cut(s) 31
BshFI GGCC 4 cut(s) 30, 101, 351, 849
BshNI GGYRCC 2 cut(s) 200, 514
BshTI ACCGGT 1 cut(s) 604
BsiEI CGRYCG 1 cut(s) 31
BsiHKAI GWGCWC 3 cut(s) 285, 345, 777
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 9 cut(s) 31, 120, 308, 518, 605, 624, 789, 863, 971
BslI CCNNNNNNNGG 2 cut(s) 447, 561
BsmAI GTCTC 1 cut(s) 843
BsmBI CGTCTC 1 cut(s) 843
BsnI GGCC 4 cut(s) 30, 101, 351, 849
BsoBI CYCGRG 1 cut(s) 569
Bsp1286I GDGCHC 4 cut(s) 285, 345, 568, 777
Bsp13I TCCGGA 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 5 cut(s) 205, 613, 736, 796, 979
BspANI GGCC 4 cut(s) 30, 101, 351, 849
BspCNI CTCAG 2 cut(s) 357, 751
BspEI TCCGGA 1 cut(s) 862
BspFNI CGCG 3 cut(s) 15, 428, 779
BspLI GGNNCC 4 cut(s) 172, 202, 516, 738
BspPI GGATC 4 cut(s) 621, 731, 744, 987
BspT107I GGYRCC 2 cut(s) 200, 514
BsrBI CCGCTC 1 cut(s) 597
BsrFI RCCGGY 1 cut(s) 604
BsrGI TGTACA 1 cut(s) 507
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 2 cut(s) 31, 622
BssMI GATC 5 cut(s) 205, 613, 736, 796, 979
BssNI GRCGYC 5 cut(s) 110, 201, 515, 558, 836
Bst2UI CCWGG 1 cut(s) 410
Bst4CI ACNGT 2 cut(s) 507, 805
BstACI GRCGYC 5 cut(s) 110, 201, 515, 558, 836
BstAUI TGTACA 1 cut(s) 507
BstC8I GCNNGC 5 cut(s) 259, 305, 453, 595, 777
BstDEI CTNAG 2 cut(s) 344, 759
BstF5I GGATG 3 cut(s) 186, 283, 360
BstFNI CGCG 3 cut(s) 15, 428, 779
BstH2I RGCGCY 2 cut(s) 204, 518
BstHHI GCGC 4 cut(s) 203, 428, 517, 826
BstKTI GATC 5 cut(s) 208, 616, 739, 799, 982
BstMAI GTCTC 1 cut(s) 843
BstMBI GATC 5 cut(s) 205, 613, 736, 796, 979
BstMCI CGRYCG 1 cut(s) 31
BstMWI GCNNNNNNNGC 8 cut(s) 36, 107, 198, 425, 437, 461, 590, 772
BstNI CCWGG 1 cut(s) 410
BstNSI RCATGY 1 cut(s) 637
BstSCI CCNGG 3 cut(s) 30, 408, 622
BstUI CGCG 3 cut(s) 15, 428, 779
BstV1I GCAGC 2 cut(s) 179, 838
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 1 cut(s) 736
BstYI RGATCY 1 cut(s) 736
BstZI CGGCCG 1 cut(s) 28
BsuRI GGCC 4 cut(s) 30, 101, 351, 849
BtsCI GGATG 3 cut(s) 186, 283, 360
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 3 cut(s) 382, 503, 801
Cac8I GCNNGC 5 cut(s) 259, 305, 453, 595, 777
CfoI GCGC 4 cut(s) 203, 428, 517, 826
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 2 cut(s) 100, 848
CseI GACGC 3 cut(s) 99, 309, 825
Csp6I GTAC 2 cut(s) 253, 508
CspAI ACCGGT 1 cut(s) 604
CviAII CATG 2 cut(s) 511, 634
CviQI GTAC 2 cut(s) 253, 508
DdeI CTNAG 2 cut(s) 344, 759
DinI GGCGCC 2 cut(s) 202, 516
DpnI GATC 5 cut(s) 207, 615, 738, 798, 981
DpnII GATC 5 cut(s) 205, 613, 736, 796, 979
EaeI YGGCCR 1 cut(s) 28
EagI CGGCCG 1 cut(s) 28
EciI GGCGGA 5 cut(s) 78, 290, 312, 599, 992
Ecl136II GAGCTC 1 cut(s) 283
EclXI CGGCCG 1 cut(s) 28
Eco147I AGGCCT 1 cut(s) 351
Eco24I GRGCYC 2 cut(s) 285, 568
Eco52I CGGCCG 1 cut(s) 28
Eco53kI GAGCTC 1 cut(s) 283
Eco57I CTGAAG 3 cut(s) 125, 383, 1050
Eco88I CYCGRG 1 cut(s) 569
EcoICRI GAGCTC 1 cut(s) 283
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 408
EcoT38I GRGCYC 2 cut(s) 285, 568
EgeI GGCGCC 2 cut(s) 202, 516
EheI GGCGCC 2 cut(s) 202, 516
Esp3I CGTCTC 1 cut(s) 843
FaeI CATG 2 cut(s) 514, 637
FaiI YATR 3 cut(s) 512, 635, 1049
FatI CATG 2 cut(s) 510, 633
FauI CCCGC 1 cut(s) 590
Fnu4HI GCNGC 9 cut(s) 92, 193, 262, 265, 429, 674, 827, 975, 989
FokI GGATG 3 cut(s) 173, 290, 347
FriOI GRGCYC 2 cut(s) 285, 568
Fsp4HI GCNGC 9 cut(s) 92, 193, 262, 265, 429, 674, 827, 975, 989
FspBI CTAG 1 cut(s) 882
GlaI GCGC 4 cut(s) 202, 427, 516, 825
GluI GCNGC 9 cut(s) 92, 193, 262, 265, 429, 674, 827, 975, 989
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 2 cut(s) 204, 518
HaeIII GGCC 4 cut(s) 30, 101, 351, 849
HapII CCGG 9 cut(s) 31, 120, 308, 518, 605, 624, 789, 863, 971
HgaI GACGC 3 cut(s) 99, 309, 825
HhaI GCGC 4 cut(s) 203, 428, 517, 826
Hin1I GRCGYC 5 cut(s) 110, 201, 515, 558, 836
Hin1II CATG 2 cut(s) 514, 637
Hin6I GCGC 4 cut(s) 201, 426, 515, 824
HinP1I GCGC 4 cut(s) 201, 426, 515, 824
HincII GTYRAC 1 cut(s) 529
HindII GTYRAC 1 cut(s) 529
HindIII AAGCTT 3 cut(s) 37, 395, 641
HinfI GANTC 7 cut(s) 10, 116, 131, 470, 521, 545, 932
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 9 cut(s) 31, 120, 308, 518, 605, 624, 789, 863, 971
Hpy166II GTNNAC 3 cut(s) 382, 529, 631
Hpy188III TCNNGA 5 cut(s) 139, 248, 770, 863, 954
Hpy8I GTNNAC 3 cut(s) 382, 529, 631
Hpy99I CGWCG 6 cut(s) 425, 560, 668, 797, 955, 1003
HpyAV CCTTC 3 cut(s) 100, 727, 814
HpyCH4III ACNGT 2 cut(s) 507, 805
HpyCH4IV ACGT 1 cut(s) 558
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 107, 198, 425, 437, 461, 590, 772
HpyF3I CTNAG 2 cut(s) 344, 759
HpySE526I ACGT 1 cut(s) 558
Hsp92I GRCGYC 5 cut(s) 110, 201, 515, 558, 836
Hsp92II CATG 2 cut(s) 514, 637
HspAI GCGC 4 cut(s) 201, 426, 515, 824
KasI GGCGCC 2 cut(s) 200, 514
Kpn2I TCCGGA 1 cut(s) 862
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 5 cut(s) 205, 613, 736, 796, 979
LmnI GCTCC 2 cut(s) 176, 557
Lsp1109I GCAGC 2 cut(s) 179, 838
LweI GCATC 1 cut(s) 753
MaeI CTAG 1 cut(s) 882
MaeII ACGT 1 cut(s) 558
MaeIII GTNAC 1 cut(s) 1039
MalI GATC 5 cut(s) 207, 615, 738, 798, 981
MbiI CCGCTC 1 cut(s) 597
MboI GATC 5 cut(s) 205, 613, 736, 796, 979
MboII GAAGA 5 cut(s) 69, 77, 469, 710, 1043
MfeI CAATTG 1 cut(s) 1015
MflI RGATCY 1 cut(s) 736
MhlI GDGCHC 4 cut(s) 285, 345, 568, 777
MluCI AATT 9 cut(s) 230, 311, 356, 435, 891, 902, 925, 1015, 1044
MluI ACGCGT 1 cut(s) 777
Mly113I GGCGCC 2 cut(s) 201, 515
MlyI GAGTC 2 cut(s) 554, 926
MmeI TCCRAC 1 cut(s) 579
MnlI CCTC 7 cut(s) 167, 341, 653, 679, 808, 839, 997
MroI TCCGGA 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 635
MseI TTAA 1 cut(s) 528
MspA1I CMGCKG 4 cut(s) 94, 192, 261, 829
MspI CCGG 9 cut(s) 31, 120, 308, 518, 605, 624, 789, 863, 971
MspR9I CCNGG 3 cut(s) 32, 410, 624
MunI CAATTG 1 cut(s) 1015
MvaI CCWGG 1 cut(s) 410
MvnI CGCG 3 cut(s) 15, 428, 779
MwoI GCNNNNNNNGC 8 cut(s) 36, 107, 198, 425, 437, 461, 590, 772
NarI GGCGCC 2 cut(s) 201, 515
NciI CCSGG 2 cut(s) 32, 624
NdeII GATC 5 cut(s) 205, 613, 736, 796, 979
NlaIII CATG 2 cut(s) 514, 637
NlaIV GGNNCC 4 cut(s) 172, 202, 516, 738
NspI RCATGY 1 cut(s) 637
PceI AGGCCT 1 cut(s) 351
PciI ACATGT 1 cut(s) 633
PcsI WCGNNNNNNNCGW 2 cut(s) 384, 839
PdmI GAANNNNTTC 1 cut(s) 635
PfeI GAWTC 5 cut(s) 10, 116, 131, 470, 521
PinAI ACCGGT 1 cut(s) 604
PkrI GCNGC 9 cut(s) 93, 194, 263, 266, 430, 675, 828, 976, 990
PleI GAGTC 2 cut(s) 553, 926
PluTI GGCGCC 2 cut(s) 204, 518
PpsI GAGTC 2 cut(s) 553, 926
PscI ACATGT 1 cut(s) 633
Psp124BI GAGCTC 1 cut(s) 285
Psp6I CCWGG 1 cut(s) 408
PspGI CCWGG 1 cut(s) 408
PspN4I GGNNCC 4 cut(s) 172, 202, 516, 738
PspPI GGNCC 2 cut(s) 100, 848
PsuI RGATCY 1 cut(s) 736
PvuII CAGCTG 1 cut(s) 829
RsaI GTAC 2 cut(s) 254, 509
RsaNI GTAC 2 cut(s) 253, 508
SacI GAGCTC 1 cut(s) 285
SaqAI TTAA 1 cut(s) 528
SatI GCNGC 9 cut(s) 92, 193, 262, 265, 429, 674, 827, 975, 989
Sau3AI GATC 5 cut(s) 205, 613, 736, 796, 979
Sau96I GGNCC 2 cut(s) 100, 848
SchI GAGTC 2 cut(s) 554, 926
ScrFI CCNGG 3 cut(s) 32, 410, 624
SduI GDGCHC 4 cut(s) 285, 345, 568, 777
SetI ASST 7 cut(s) 41, 285, 399, 486, 561, 645, 831
SfaNI GCATC 1 cut(s) 753
SfoI GGCGCC 2 cut(s) 202, 516
SmlI CTYRAG 2 cut(s) 137, 770
SmoI CTYRAG 2 cut(s) 137, 770
Sse9I AATT 9 cut(s) 230, 311, 356, 435, 891, 902, 925, 1015, 1044
SseBI AGGCCT 1 cut(s) 351
SspDI GGCGCC 2 cut(s) 200, 514
SspMI CTAG 1 cut(s) 882
SstI GAGCTC 1 cut(s) 285
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 3 cut(s) 30, 408, 622
TaaI ACNGT 2 cut(s) 507, 805
TaiI ACGT 1 cut(s) 561
TaqI TCGA 5 cut(s) 159, 486, 855, 942, 953
TasI AATT 9 cut(s) 230, 311, 356, 435, 891, 902, 925, 1015, 1044
TatI WGTACW 1 cut(s) 507
TauI GCSGC 7 cut(s) 94, 264, 267, 431, 676, 977, 991
TfiI GAWTC 5 cut(s) 10, 116, 131, 470, 521
Tru1I TTAA 1 cut(s) 528
Tru9I TTAA 1 cut(s) 528
TscAI CASTG 3 cut(s) 389, 510, 808
TseI GCWGC 2 cut(s) 192, 826
TspDTI ATGAA 2 cut(s) 349, 552
TspGWI ACGGA 2 cut(s) 202, 1016
TspRI CASTG 3 cut(s) 389, 510, 808
XapI RAATTY 5 cut(s) 230, 311, 356, 891, 925
XceI RCATGY 1 cut(s) 637
XmnI GAANNNNTTC 1 cut(s) 635
XspI CTAG 1 cut(s) 882
ZraI GACGTC 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.