MD02G1173600.v1.1

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
15253056 .. 15254108
1053 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1173600.v1.1.491

Sequence Viewer

Length: 1053 bp
ATGGAGTGGATTCGCGGTAAAGAAATCGGCCGTGGAAGTTTCGCAACCATCTACGCAGCAAAACCCACCAGCCCATCTTCTCACCTTCCGCCGCTGGTGGCCGTCAAGTCGTCTGTATCCGGATACTCTGATTCGCTCAAGAACGAGAAGAAAGTCCTCCACCAAATCGGCTCCTGCCCACAAATCATCCGTTGCTTCGGCGACGATCACACAGTCGAGAACGGCGAGAAGTTCTTCAACTTGGTTCTGGAGTACGCCAGCGGCGGCACTCTGGCGGACGAGCTAAAAAGAACCGGCGGAAGCTTGCCGGAATTTGATGTTCGACGCCACGTAAAGTCGGTGCTCAGAGGACTTGAATTCATCCACGCAAAAGGGTTCGTCCACTGTGACTTGAAGCTTCAGAACGTCCTGGTTTTCGGCAACGGCGCGGCGAAAATCGCCGACTTCGGGCTTGCGAAGAAAGCAGGGGAATCGGAAAACAACGTCGAAGTCAGGGGAACGCCGCTGTACATGGCGCCGGAATCCGTTAACGATAACGAATACGAGTCCTGCTCCGACATCTGGGCTTTCGGGTGTTTGGTGGCCGAGATGGCGAGCGGGAAACCGGTGTGGGATCACAACCCCGCCGTGAACATGTTCAAGATTCTGATGAGGATTGGCGGCGATGAGTTGCCGCAAATTCCGGAGGAGTTGAGTGAAGAAGGCAAAGATTTTGTTTCCAAGTGTTTCGTAAAGGACCCCAAACAGAGATGGACGGCTGAGATGCTTCTAAAGCACCCATTTGTTTCCGGCGACGATCACACTGTTCTATTGGATGACAAGGCGGAGCTCTCAGCCTCTCCAAGAGGGCCATTCGATTTTCCGGATTGGGTTTCGATTGCGAGTTCAGAAATTTCTCCACAATTTGGGGATTTCTCTGGAAAAAATTTGGATTCCGAGTTCGATTGGTCGTCGAGAAAGAGTTTCGTTCCGGCGGCGGATCGGTTGCGGCAGCTGGCGACGGAGGAGACACCGAATTGGTCGTTCTCTGTAGATTGGGTGACAACCATGTAA

Protein Analysis

351

Amino Acids

38.77

Weight (kDa)

5.23

Isoelectric Point (pI)

39.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 5 - 262 2.7e-57 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 257 4.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010933)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 514
AccB7I CCANNNNNTGG 1 cut(s) 905
AccBSI CCGCTC 1 cut(s) 597
AccII CGCG 2 cut(s) 15, 428
AccIII TCCGGA 3 cut(s) 119, 682, 862
AclWI GGATC 2 cut(s) 621, 987
AcoI YGGCCR 3 cut(s) 28, 99, 582
AcsI RAATTY 5 cut(s) 311, 356, 678, 891, 925
AcuI CTGAAG 1 cut(s) 383
AcyI GRCGYC 2 cut(s) 325, 515
AfaI GTAC 2 cut(s) 254, 509
AfiI CCNNNNNNNGG 3 cut(s) 447, 561, 905
AflIII ACRYGT 1 cut(s) 633
AgeI ACCGGT 1 cut(s) 604
AgsI TTSAA 4 cut(s) 238, 356, 394, 640
AjnI CCWGG 1 cut(s) 408
AloI GAACNNNNNNTCC 2 cut(s) 923, 955
AluBI AGCT 5 cut(s) 283, 303, 397, 829, 994
AluI AGCT 5 cut(s) 283, 303, 397, 829, 994
Alw21I GWGCWC 2 cut(s) 345, 831
Alw26I GTCTC 1 cut(s) 1001
AlwI GGATC 2 cut(s) 621, 987
Aor13HI TCCGGA 3 cut(s) 119, 682, 862
AoxI GGCC 4 cut(s) 28, 99, 582, 848
ApeKI GCWGC 2 cut(s) 56, 991
ApoI RAATTY 5 cut(s) 311, 356, 678, 891, 925
AsiGI ACCGGT 1 cut(s) 604
Asp700I GAANNNNTTC 2 cut(s) 233, 635
AspLEI GCGC 2 cut(s) 428, 517
AspS9I GGNCC 2 cut(s) 736, 848
AsuHPI GGTGA 2 cut(s) 74, 1051
AvaII GGWCC 1 cut(s) 736
BanI GGYRCC 1 cut(s) 514
BanII GRGCYC 1 cut(s) 831
Bbv12I GWGCWC 2 cut(s) 345, 831
BbvI GCAGC 2 cut(s) 68, 1003
BccI CCATC 4 cut(s) 56, 82, 583, 744
BceAI ACGGC 6 cut(s) 15, 86, 238, 439, 611, 771
BcgI CGANNNNNNTGC 2 cut(s) 453, 487
BciT130I CCWGG 1 cut(s) 410
BciVI GTATCC 2 cut(s) 116, 127
BcoDI GTCTC 1 cut(s) 1001
BfmI CTRYAG 1 cut(s) 1029
BfoI RGCGCY 1 cut(s) 518
BfuI GTATCC 2 cut(s) 116, 127
BglI GCCNNNNNGGC 1 cut(s) 590
Bme1390I CCNGG 1 cut(s) 410
Bme18I GGWCC 1 cut(s) 736
BmgT120I GGNCC 2 cut(s) 736, 848
BmiI GGNNCC 3 cut(s) 172, 516, 738
BmrFI CCNGG 1 cut(s) 410
BmsI GCATC 1 cut(s) 753
BplI GAGNNNNNCTC 2 cut(s) 536, 568
BpmI CTGGAG 1 cut(s) 269
BpuEI CTTGAG 1 cut(s) 122
BsaAI YACGTR 1 cut(s) 331
BsaHI GRCGYC 2 cut(s) 325, 515
BsaJI CCNNGG 1 cut(s) 31
BsaWI WCCGGW 4 cut(s) 119, 604, 682, 862
Bsc4I CCNNNNNNNGG 3 cut(s) 447, 561, 905
Bse118I RCCGGY 2 cut(s) 293, 604
BseAI TCCGGA 3 cut(s) 119, 682, 862
BseBI CCWGG 1 cut(s) 410
BseDI CCNNGG 1 cut(s) 31
BseGI GGATG 3 cut(s) 186, 360, 820
BseLI CCNNNNNNNGG 3 cut(s) 447, 561, 905
BseMII CTCAG 3 cut(s) 358, 750, 846
BseRI GAGGAG 2 cut(s) 701, 1019
BseX3I CGGCCG 1 cut(s) 28
BseXI GCAGC 2 cut(s) 68, 1003
Bsh1236I CGCG 2 cut(s) 15, 428
Bsh1285I CGRYCG 1 cut(s) 31
BshFI GGCC 4 cut(s) 30, 101, 584, 850
BshNI GGYRCC 1 cut(s) 514
BshTI ACCGGT 1 cut(s) 604
BsiEI CGRYCG 1 cut(s) 31
BsiHKAI GWGCWC 2 cut(s) 345, 831
BsiSI CCGG 9 cut(s) 120, 294, 308, 518, 605, 683, 789, 863, 971
BslI CCNNNNNNNGG 3 cut(s) 447, 561, 905
BsmAI GTCTC 1 cut(s) 1001
BsnI GGCC 4 cut(s) 30, 101, 584, 850
Bsp1286I GDGCHC 2 cut(s) 345, 831
Bsp13I TCCGGA 3 cut(s) 119, 682, 862
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 4 cut(s) 205, 613, 796, 979
BspANI GGCC 4 cut(s) 30, 101, 584, 850
BspCNI CTCAG 3 cut(s) 357, 751, 845
BspEI TCCGGA 3 cut(s) 119, 682, 862
BspFNI CGCG 2 cut(s) 15, 428
BspLI GGNNCC 3 cut(s) 172, 516, 738
BspPI GGATC 2 cut(s) 621, 987
BspT107I GGYRCC 1 cut(s) 514
BsrBI CCGCTC 1 cut(s) 597
BsrFI RCCGGY 2 cut(s) 293, 604
BsrGI TGTACA 1 cut(s) 507
BssAI RCCGGY 2 cut(s) 293, 604
BssECI CCNNGG 1 cut(s) 31
BssMI GATC 4 cut(s) 205, 613, 796, 979
BssNI GRCGYC 2 cut(s) 325, 515
Bst2UI CCWGG 1 cut(s) 410
Bst4CI ACNGT 3 cut(s) 214, 386, 805
BstACI GRCGYC 2 cut(s) 325, 515
BstAUI TGTACA 1 cut(s) 507
BstBAI YACGTR 1 cut(s) 331
BstC8I GCNNGC 5 cut(s) 259, 305, 453, 595, 996
BstDEI CTNAG 3 cut(s) 344, 759, 832
BstDSI CCRYGG 1 cut(s) 31
BstF5I GGATG 3 cut(s) 186, 360, 820
BstFNI CGCG 2 cut(s) 15, 428
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 2 cut(s) 428, 517
BstKTI GATC 4 cut(s) 208, 616, 799, 982
BstMAI GTCTC 1 cut(s) 1001
BstMBI GATC 4 cut(s) 205, 613, 796, 979
BstMCI CGRYCG 1 cut(s) 31
BstMWI GCNNNNNNNGC 4 cut(s) 437, 461, 590, 772
BstNI CCWGG 1 cut(s) 410
BstNSI RCATGY 1 cut(s) 637
BstSCI CCNGG 1 cut(s) 408
BstSFI CTRYAG 1 cut(s) 1029
BstUI CGCG 2 cut(s) 15, 428
BstV1I GCAGC 2 cut(s) 68, 1003
BstZI CGGCCG 1 cut(s) 28
BsuI GTATCC 2 cut(s) 116, 127
BsuRI GGCC 4 cut(s) 30, 101, 584, 850
BtgI CCRYGG 1 cut(s) 31
BtgZI GCGATG 1 cut(s) 678
BtsCI GGATG 3 cut(s) 186, 360, 820
BtsIMutI CAGTG 2 cut(s) 382, 801
Cac8I GCNNGC 5 cut(s) 259, 305, 453, 595, 996
CfoI GCGC 2 cut(s) 428, 517
Cfr10I RCCGGY 2 cut(s) 293, 604
Cfr13I GGNCC 2 cut(s) 736, 848
CseI GACGC 1 cut(s) 333
Csp6I GTAC 2 cut(s) 253, 508
CspAI ACCGGT 1 cut(s) 604
CviAII CATG 3 cut(s) 511, 634, 1048
CviQI GTAC 2 cut(s) 253, 508
DdeI CTNAG 3 cut(s) 344, 759, 832
DinI GGCGCC 1 cut(s) 516
DpnI GATC 4 cut(s) 207, 615, 798, 981
DpnII GATC 4 cut(s) 205, 613, 796, 979
EaeI YGGCCR 3 cut(s) 28, 99, 582
EagI CGGCCG 1 cut(s) 28
EciI GGCGGA 5 cut(s) 78, 290, 312, 839, 992
Ecl136II GAGCTC 1 cut(s) 829
EclXI CGGCCG 1 cut(s) 28
Eco24I GRGCYC 1 cut(s) 831
Eco47I GGWCC 1 cut(s) 736
Eco52I CGGCCG 1 cut(s) 28
Eco53kI GAGCTC 1 cut(s) 829
Eco57I CTGAAG 1 cut(s) 383
EcoICRI GAGCTC 1 cut(s) 829
EcoO109I RGGNCCY 1 cut(s) 736
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 408
EcoT38I GRGCYC 1 cut(s) 831
EgeI GGCGCC 1 cut(s) 516
EheI GGCGCC 1 cut(s) 516
FaeI CATG 3 cut(s) 514, 637, 1051
FaiI YATR 3 cut(s) 512, 635, 1049
FatI CATG 3 cut(s) 510, 633, 1047
FauI CCCGC 2 cut(s) 590, 631
FokI GGATG 3 cut(s) 173, 347, 827
FriOI GRGCYC 1 cut(s) 831
GlaI GCGC 2 cut(s) 427, 516
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 4 cut(s) 30, 101, 584, 850
HapII CCGG 9 cut(s) 120, 294, 308, 518, 605, 683, 789, 863, 971
HgaI GACGC 1 cut(s) 333
HhaI GCGC 2 cut(s) 428, 517
Hin1I GRCGYC 2 cut(s) 325, 515
Hin1II CATG 3 cut(s) 514, 637, 1051
Hin6I GCGC 2 cut(s) 426, 515
HinP1I GCGC 2 cut(s) 426, 515
HincII GTYRAC 1 cut(s) 529
HindII GTYRAC 1 cut(s) 529
HindIII AAGCTT 2 cut(s) 301, 395
HinfI GANTC 7 cut(s) 10, 131, 470, 521, 545, 643, 932
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 9 cut(s) 120, 294, 308, 518, 605, 683, 789, 863, 971
HphI GGTGA 2 cut(s) 74, 1051
Hpy166II GTNNAC 3 cut(s) 382, 529, 631
Hpy188I TCNGA 8 cut(s) 130, 347, 402, 475, 556, 648, 889, 937
Hpy188III TCNNGA 9 cut(s) 120, 139, 217, 248, 640, 683, 863, 918, 954
Hpy8I GTNNAC 3 cut(s) 382, 529, 631
Hpy99I CGWCG 6 cut(s) 206, 327, 488, 797, 955, 1003
HpyAV CCTTC 2 cut(s) 95, 695
HpyCH4III ACNGT 3 cut(s) 214, 386, 805
HpyCH4IV ACGT 3 cut(s) 330, 405, 483
HpyF10VI GCNNNNNNNGC 4 cut(s) 437, 461, 590, 772
HpyF3I CTNAG 3 cut(s) 344, 759, 832
HpySE526I ACGT 3 cut(s) 330, 405, 483
Hsp92I GRCGYC 2 cut(s) 325, 515
Hsp92II CATG 3 cut(s) 514, 637, 1051
HspAI GCGC 2 cut(s) 426, 515
KasI GGCGCC 1 cut(s) 514
Kpn2I TCCGGA 3 cut(s) 119, 682, 862
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 4 cut(s) 205, 613, 796, 979
LmnI GCTCC 3 cut(s) 176, 557, 826
Lsp1109I GCAGC 2 cut(s) 68, 1003
LweI GCATC 1 cut(s) 753
MaeII ACGT 3 cut(s) 330, 405, 483
MaeIII GTNAC 2 cut(s) 386, 1039
MalI GATC 4 cut(s) 207, 615, 798, 981
MbiI CCGCTC 1 cut(s) 597
MboI GATC 4 cut(s) 205, 613, 796, 979
MboII GAAGA 5 cut(s) 69, 160, 226, 469, 710
MhlI GDGCHC 2 cut(s) 345, 831
MluCI AATT 7 cut(s) 311, 356, 678, 891, 902, 925, 1015
Mly113I GGCGCC 1 cut(s) 515
MlyI GAGTC 1 cut(s) 554
MmeI TCCRAC 1 cut(s) 579
MnlI CCTC 7 cut(s) 167, 341, 645, 679, 839, 847, 997
MroI TCCGGA 3 cut(s) 119, 682, 862
MroXI GAANNNNTTC 2 cut(s) 233, 635
MseI TTAA 1 cut(s) 528
MspA1I CMGCKG 4 cut(s) 94, 261, 505, 994
MspI CCGG 9 cut(s) 120, 294, 308, 518, 605, 683, 789, 863, 971
MspR9I CCNGG 1 cut(s) 410
MvaI CCWGG 1 cut(s) 410
MvnI CGCG 2 cut(s) 15, 428
MwoI GCNNNNNNNGC 4 cut(s) 437, 461, 590, 772
NarI GGCGCC 1 cut(s) 515
NdeII GATC 4 cut(s) 205, 613, 796, 979
NlaIII CATG 3 cut(s) 514, 637, 1051
NlaIV GGNNCC 3 cut(s) 172, 516, 738
NmeAIII GCCGAG 1 cut(s) 610
NmuCI GTSAC 2 cut(s) 386, 1039
NspI RCATGY 1 cut(s) 637
PciI ACATGT 1 cut(s) 633
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdmI GAANNNNTTC 2 cut(s) 233, 635
PfeI GAWTC 6 cut(s) 10, 131, 470, 521, 643, 932
PflMI CCANNNNNTGG 1 cut(s) 905
PinAI ACCGGT 1 cut(s) 604
PleI GAGTC 1 cut(s) 553
PluTI GGCGCC 1 cut(s) 518
PpsI GAGTC 1 cut(s) 553
Ppu21I YACGTR 1 cut(s) 331
PpuMI RGGWCCY 1 cut(s) 736
PscI ACATGT 1 cut(s) 633
Psp124BI GAGCTC 1 cut(s) 831
Psp5II RGGWCCY 1 cut(s) 736
Psp6I CCWGG 1 cut(s) 408
PspGI CCWGG 1 cut(s) 408
PspN4I GGNNCC 3 cut(s) 172, 516, 738
PspPI GGNCC 2 cut(s) 736, 848
PspPPI RGGWCCY 1 cut(s) 736
PvuII CAGCTG 1 cut(s) 994
RsaI GTAC 2 cut(s) 254, 509
RsaNI GTAC 2 cut(s) 253, 508
SacI GAGCTC 1 cut(s) 831
SaqAI TTAA 1 cut(s) 528
Sau3AI GATC 4 cut(s) 205, 613, 796, 979
Sau96I GGNCC 2 cut(s) 736, 848
SchI GAGTC 1 cut(s) 554
ScrFI CCNGG 1 cut(s) 410
SduI GDGCHC 2 cut(s) 345, 831
SetI ASST 9 cut(s) 87, 285, 305, 333, 399, 408, 486, 831, 996
SfaNI GCATC 1 cut(s) 753
SfcI CTRYAG 1 cut(s) 1029
SfoI GGCGCC 1 cut(s) 516
SinI GGWCC 1 cut(s) 736
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
Sse9I AATT 7 cut(s) 311, 356, 678, 891, 902, 925, 1015
SspDI GGCGCC 1 cut(s) 514
SstI GAGCTC 1 cut(s) 831
StyD4I CCNGG 1 cut(s) 408
TaaI ACNGT 3 cut(s) 214, 386, 805
TaiI ACGT 3 cut(s) 333, 408, 486
TaqI TCGA 7 cut(s) 216, 322, 486, 855, 875, 942, 953
TasI AATT 7 cut(s) 311, 356, 678, 891, 902, 925, 1015
TatI WGTACW 1 cut(s) 507
TauI GCSGC 9 cut(s) 94, 264, 267, 431, 505, 663, 676, 977, 991
TfiI GAWTC 6 cut(s) 10, 131, 470, 521, 643, 932
Tru1I TTAA 1 cut(s) 528
Tru9I TTAA 1 cut(s) 528
TscAI CASTG 2 cut(s) 389, 808
TseFI GTSAC 2 cut(s) 386, 1039
TseI GCWGC 2 cut(s) 56, 991
Tsp45I GTSAC 2 cut(s) 386, 1039
TspDTI ATGAA 1 cut(s) 349
TspGWI ACGGA 3 cut(s) 179, 514, 1016
TspRI CASTG 2 cut(s) 389, 808
Van91I CCANNNNNTGG 1 cut(s) 905
VpaK11BI GGWCC 1 cut(s) 736
XapI RAATTY 5 cut(s) 311, 356, 678, 891, 925
XceI RCATGY 1 cut(s) 637
XmnI GAANNNNTTC 2 cut(s) 233, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.