Mitogen-activated protein kinase kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50310 AT4G36950 AT5G67080 |
| fragaria_vesca | FvH4_1g16150 |
| malus_domestica | MD02G1173600.v1.1 MD15G1285100.v1.1 |
| prunus_persica | Prupe.2G016400_v2.0.a1 Prupe.3G259700_v2.0.a1 Prupe.7G132100_v2.0.a1 |
| pyrus_communis | pycom02g14000 |
| rosa_chinensis | RchiOBHm_Chr2g0105831 |
| rosa_laevigata | RLG00000017463 |
| rosa_multiflora | Rmu_sc0004386.1_g000026 |
| rosa_roxburghii | Rroxscaffold_2G00137860 |
| rosa_rugosa | Rorug02G0130700 |
| rosa_samantha | Rh2AG181800 Rh2BG191600 Rh2CG186200 Rh2DG188200 |
| rosa_wichuraiana | Rw2G014250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 514 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 905 |
| AccBSI | CCGCTC | 1 cut(s) | 597 |
| AccII | CGCG | 2 cut(s) | 15, 428 |
| AccIII | TCCGGA | 3 cut(s) | 119, 682, 862 |
| AclWI | GGATC | 2 cut(s) | 621, 987 |
| AcoI | YGGCCR | 3 cut(s) | 28, 99, 582 |
| AcsI | RAATTY | 5 cut(s) | 311, 356, 678, 891, 925 |
| AcuI | CTGAAG | 1 cut(s) | 383 |
| AcyI | GRCGYC | 2 cut(s) | 325, 515 |
| AfaI | GTAC | 2 cut(s) | 254, 509 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 447, 561, 905 |
| AflIII | ACRYGT | 1 cut(s) | 633 |
| AgeI | ACCGGT | 1 cut(s) | 604 |
| AgsI | TTSAA | 4 cut(s) | 238, 356, 394, 640 |
| AjnI | CCWGG | 1 cut(s) | 408 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 923, 955 |
| AluBI | AGCT | 5 cut(s) | 283, 303, 397, 829, 994 |
| AluI | AGCT | 5 cut(s) | 283, 303, 397, 829, 994 |
| Alw21I | GWGCWC | 2 cut(s) | 345, 831 |
| Alw26I | GTCTC | 1 cut(s) | 1001 |
| AlwI | GGATC | 2 cut(s) | 621, 987 |
| Aor13HI | TCCGGA | 3 cut(s) | 119, 682, 862 |
| AoxI | GGCC | 4 cut(s) | 28, 99, 582, 848 |
| ApeKI | GCWGC | 2 cut(s) | 56, 991 |
| ApoI | RAATTY | 5 cut(s) | 311, 356, 678, 891, 925 |
| AsiGI | ACCGGT | 1 cut(s) | 604 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 233, 635 |
| AspLEI | GCGC | 2 cut(s) | 428, 517 |
| AspS9I | GGNCC | 2 cut(s) | 736, 848 |
| AsuHPI | GGTGA | 2 cut(s) | 74, 1051 |
| AvaII | GGWCC | 1 cut(s) | 736 |
| BanI | GGYRCC | 1 cut(s) | 514 |
| BanII | GRGCYC | 1 cut(s) | 831 |
| Bbv12I | GWGCWC | 2 cut(s) | 345, 831 |
| BbvI | GCAGC | 2 cut(s) | 68, 1003 |
| BccI | CCATC | 4 cut(s) | 56, 82, 583, 744 |
| BceAI | ACGGC | 6 cut(s) | 15, 86, 238, 439, 611, 771 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 453, 487 |
| BciT130I | CCWGG | 1 cut(s) | 410 |
| BciVI | GTATCC | 2 cut(s) | 116, 127 |
| BcoDI | GTCTC | 1 cut(s) | 1001 |
| BfmI | CTRYAG | 1 cut(s) | 1029 |
| BfoI | RGCGCY | 1 cut(s) | 518 |
| BfuI | GTATCC | 2 cut(s) | 116, 127 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 590 |
| Bme1390I | CCNGG | 1 cut(s) | 410 |
| Bme18I | GGWCC | 1 cut(s) | 736 |
| BmgT120I | GGNCC | 2 cut(s) | 736, 848 |
| BmiI | GGNNCC | 3 cut(s) | 172, 516, 738 |
| BmrFI | CCNGG | 1 cut(s) | 410 |
| BmsI | GCATC | 1 cut(s) | 753 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 536, 568 |
| BpmI | CTGGAG | 1 cut(s) | 269 |
| BpuEI | CTTGAG | 1 cut(s) | 122 |
| BsaAI | YACGTR | 1 cut(s) | 331 |
| BsaHI | GRCGYC | 2 cut(s) | 325, 515 |
| BsaJI | CCNNGG | 1 cut(s) | 31 |
| BsaWI | WCCGGW | 4 cut(s) | 119, 604, 682, 862 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 447, 561, 905 |
| Bse118I | RCCGGY | 2 cut(s) | 293, 604 |
| BseAI | TCCGGA | 3 cut(s) | 119, 682, 862 |
| BseBI | CCWGG | 1 cut(s) | 410 |
| BseDI | CCNNGG | 1 cut(s) | 31 |
| BseGI | GGATG | 3 cut(s) | 186, 360, 820 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 447, 561, 905 |
| BseMII | CTCAG | 3 cut(s) | 358, 750, 846 |
| BseRI | GAGGAG | 2 cut(s) | 701, 1019 |
| BseX3I | CGGCCG | 1 cut(s) | 28 |
| BseXI | GCAGC | 2 cut(s) | 68, 1003 |
| Bsh1236I | CGCG | 2 cut(s) | 15, 428 |
| Bsh1285I | CGRYCG | 1 cut(s) | 31 |
| BshFI | GGCC | 4 cut(s) | 30, 101, 584, 850 |
| BshNI | GGYRCC | 1 cut(s) | 514 |
| BshTI | ACCGGT | 1 cut(s) | 604 |
| BsiEI | CGRYCG | 1 cut(s) | 31 |
| BsiHKAI | GWGCWC | 2 cut(s) | 345, 831 |
| BsiSI | CCGG | 9 cut(s) | 120, 294, 308, 518, 605, 683, 789, 863, 971 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 447, 561, 905 |
| BsmAI | GTCTC | 1 cut(s) | 1001 |
| BsnI | GGCC | 4 cut(s) | 30, 101, 584, 850 |
| Bsp1286I | GDGCHC | 2 cut(s) | 345, 831 |
| Bsp13I | TCCGGA | 3 cut(s) | 119, 682, 862 |
| Bsp1407I | TGTACA | 1 cut(s) | 507 |
| Bsp143I | GATC | 4 cut(s) | 205, 613, 796, 979 |
| BspANI | GGCC | 4 cut(s) | 30, 101, 584, 850 |
| BspCNI | CTCAG | 3 cut(s) | 357, 751, 845 |
| BspEI | TCCGGA | 3 cut(s) | 119, 682, 862 |
| BspFNI | CGCG | 2 cut(s) | 15, 428 |
| BspLI | GGNNCC | 3 cut(s) | 172, 516, 738 |
| BspPI | GGATC | 2 cut(s) | 621, 987 |
| BspT107I | GGYRCC | 1 cut(s) | 514 |
| BsrBI | CCGCTC | 1 cut(s) | 597 |
| BsrFI | RCCGGY | 2 cut(s) | 293, 604 |
| BsrGI | TGTACA | 1 cut(s) | 507 |
| BssAI | RCCGGY | 2 cut(s) | 293, 604 |
| BssECI | CCNNGG | 1 cut(s) | 31 |
| BssMI | GATC | 4 cut(s) | 205, 613, 796, 979 |
| BssNI | GRCGYC | 2 cut(s) | 325, 515 |
| Bst2UI | CCWGG | 1 cut(s) | 410 |
| Bst4CI | ACNGT | 3 cut(s) | 214, 386, 805 |
| BstACI | GRCGYC | 2 cut(s) | 325, 515 |
| BstAUI | TGTACA | 1 cut(s) | 507 |
| BstBAI | YACGTR | 1 cut(s) | 331 |
| BstC8I | GCNNGC | 5 cut(s) | 259, 305, 453, 595, 996 |
| BstDEI | CTNAG | 3 cut(s) | 344, 759, 832 |
| BstDSI | CCRYGG | 1 cut(s) | 31 |
| BstF5I | GGATG | 3 cut(s) | 186, 360, 820 |
| BstFNI | CGCG | 2 cut(s) | 15, 428 |
| BstH2I | RGCGCY | 1 cut(s) | 518 |
| BstHHI | GCGC | 2 cut(s) | 428, 517 |
| BstKTI | GATC | 4 cut(s) | 208, 616, 799, 982 |
| BstMAI | GTCTC | 1 cut(s) | 1001 |
| BstMBI | GATC | 4 cut(s) | 205, 613, 796, 979 |
| BstMCI | CGRYCG | 1 cut(s) | 31 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 590, 772 |
| BstNI | CCWGG | 1 cut(s) | 410 |
| BstNSI | RCATGY | 1 cut(s) | 637 |
| BstSCI | CCNGG | 1 cut(s) | 408 |
| BstSFI | CTRYAG | 1 cut(s) | 1029 |
| BstUI | CGCG | 2 cut(s) | 15, 428 |
| BstV1I | GCAGC | 2 cut(s) | 68, 1003 |
| BstZI | CGGCCG | 1 cut(s) | 28 |
| BsuI | GTATCC | 2 cut(s) | 116, 127 |
| BsuRI | GGCC | 4 cut(s) | 30, 101, 584, 850 |
| BtgI | CCRYGG | 1 cut(s) | 31 |
| BtgZI | GCGATG | 1 cut(s) | 678 |
| BtsCI | GGATG | 3 cut(s) | 186, 360, 820 |
| BtsIMutI | CAGTG | 2 cut(s) | 382, 801 |
| Cac8I | GCNNGC | 5 cut(s) | 259, 305, 453, 595, 996 |
| CfoI | GCGC | 2 cut(s) | 428, 517 |
| Cfr10I | RCCGGY | 2 cut(s) | 293, 604 |
| Cfr13I | GGNCC | 2 cut(s) | 736, 848 |
| CseI | GACGC | 1 cut(s) | 333 |
| Csp6I | GTAC | 2 cut(s) | 253, 508 |
| CspAI | ACCGGT | 1 cut(s) | 604 |
| CviAII | CATG | 3 cut(s) | 511, 634, 1048 |
| CviQI | GTAC | 2 cut(s) | 253, 508 |
| DdeI | CTNAG | 3 cut(s) | 344, 759, 832 |
| DinI | GGCGCC | 1 cut(s) | 516 |
| DpnI | GATC | 4 cut(s) | 207, 615, 798, 981 |
| DpnII | GATC | 4 cut(s) | 205, 613, 796, 979 |
| EaeI | YGGCCR | 3 cut(s) | 28, 99, 582 |
| EagI | CGGCCG | 1 cut(s) | 28 |
| EciI | GGCGGA | 5 cut(s) | 78, 290, 312, 839, 992 |
| Ecl136II | GAGCTC | 1 cut(s) | 829 |
| EclXI | CGGCCG | 1 cut(s) | 28 |
| Eco24I | GRGCYC | 1 cut(s) | 831 |
| Eco47I | GGWCC | 1 cut(s) | 736 |
| Eco52I | CGGCCG | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 1 cut(s) | 829 |
| Eco57I | CTGAAG | 1 cut(s) | 383 |
| EcoICRI | GAGCTC | 1 cut(s) | 829 |
| EcoO109I | RGGNCCY | 1 cut(s) | 736 |
| EcoRI | GAATTC | 1 cut(s) | 356 |
| EcoRII | CCWGG | 1 cut(s) | 408 |
| EcoT38I | GRGCYC | 1 cut(s) | 831 |
| EgeI | GGCGCC | 1 cut(s) | 516 |
| EheI | GGCGCC | 1 cut(s) | 516 |
| FaeI | CATG | 3 cut(s) | 514, 637, 1051 |
| FaiI | YATR | 3 cut(s) | 512, 635, 1049 |
| FatI | CATG | 3 cut(s) | 510, 633, 1047 |
| FauI | CCCGC | 2 cut(s) | 590, 631 |
| FokI | GGATG | 3 cut(s) | 173, 347, 827 |
| FriOI | GRGCYC | 1 cut(s) | 831 |
| GlaI | GCGC | 2 cut(s) | 427, 516 |
| GsuI | CTGGAG | 1 cut(s) | 269 |
| HaeII | RGCGCY | 1 cut(s) | 518 |
| HaeIII | GGCC | 4 cut(s) | 30, 101, 584, 850 |
| HapII | CCGG | 9 cut(s) | 120, 294, 308, 518, 605, 683, 789, 863, 971 |
| HgaI | GACGC | 1 cut(s) | 333 |
| HhaI | GCGC | 2 cut(s) | 428, 517 |
| Hin1I | GRCGYC | 2 cut(s) | 325, 515 |
| Hin1II | CATG | 3 cut(s) | 514, 637, 1051 |
| Hin6I | GCGC | 2 cut(s) | 426, 515 |
| HinP1I | GCGC | 2 cut(s) | 426, 515 |
| HincII | GTYRAC | 1 cut(s) | 529 |
| HindII | GTYRAC | 1 cut(s) | 529 |
| HindIII | AAGCTT | 2 cut(s) | 301, 395 |
| HinfI | GANTC | 7 cut(s) | 10, 131, 470, 521, 545, 643, 932 |
| HpaI | GTTAAC | 1 cut(s) | 529 |
| HpaII | CCGG | 9 cut(s) | 120, 294, 308, 518, 605, 683, 789, 863, 971 |
| HphI | GGTGA | 2 cut(s) | 74, 1051 |
| Hpy166II | GTNNAC | 3 cut(s) | 382, 529, 631 |
| Hpy188I | TCNGA | 8 cut(s) | 130, 347, 402, 475, 556, 648, 889, 937 |
| Hpy188III | TCNNGA | 9 cut(s) | 120, 139, 217, 248, 640, 683, 863, 918, 954 |
| Hpy8I | GTNNAC | 3 cut(s) | 382, 529, 631 |
| Hpy99I | CGWCG | 6 cut(s) | 206, 327, 488, 797, 955, 1003 |
| HpyAV | CCTTC | 2 cut(s) | 95, 695 |
| HpyCH4III | ACNGT | 3 cut(s) | 214, 386, 805 |
| HpyCH4IV | ACGT | 3 cut(s) | 330, 405, 483 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 590, 772 |
| HpyF3I | CTNAG | 3 cut(s) | 344, 759, 832 |
| HpySE526I | ACGT | 3 cut(s) | 330, 405, 483 |
| Hsp92I | GRCGYC | 2 cut(s) | 325, 515 |
| Hsp92II | CATG | 3 cut(s) | 514, 637, 1051 |
| HspAI | GCGC | 2 cut(s) | 426, 515 |
| KasI | GGCGCC | 1 cut(s) | 514 |
| Kpn2I | TCCGGA | 3 cut(s) | 119, 682, 862 |
| KspAI | GTTAAC | 1 cut(s) | 529 |
| Kzo9I | GATC | 4 cut(s) | 205, 613, 796, 979 |
| LmnI | GCTCC | 3 cut(s) | 176, 557, 826 |
| Lsp1109I | GCAGC | 2 cut(s) | 68, 1003 |
| LweI | GCATC | 1 cut(s) | 753 |
| MaeII | ACGT | 3 cut(s) | 330, 405, 483 |
| MaeIII | GTNAC | 2 cut(s) | 386, 1039 |
| MalI | GATC | 4 cut(s) | 207, 615, 798, 981 |
| MbiI | CCGCTC | 1 cut(s) | 597 |
| MboI | GATC | 4 cut(s) | 205, 613, 796, 979 |
| MboII | GAAGA | 5 cut(s) | 69, 160, 226, 469, 710 |
| MhlI | GDGCHC | 2 cut(s) | 345, 831 |
| MluCI | AATT | 7 cut(s) | 311, 356, 678, 891, 902, 925, 1015 |
| Mly113I | GGCGCC | 1 cut(s) | 515 |
| MlyI | GAGTC | 1 cut(s) | 554 |
| MmeI | TCCRAC | 1 cut(s) | 579 |
| MnlI | CCTC | 7 cut(s) | 167, 341, 645, 679, 839, 847, 997 |
| MroI | TCCGGA | 3 cut(s) | 119, 682, 862 |
| MroXI | GAANNNNTTC | 2 cut(s) | 233, 635 |
| MseI | TTAA | 1 cut(s) | 528 |
| MspA1I | CMGCKG | 4 cut(s) | 94, 261, 505, 994 |
| MspI | CCGG | 9 cut(s) | 120, 294, 308, 518, 605, 683, 789, 863, 971 |
| MspR9I | CCNGG | 1 cut(s) | 410 |
| MvaI | CCWGG | 1 cut(s) | 410 |
| MvnI | CGCG | 2 cut(s) | 15, 428 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 590, 772 |
| NarI | GGCGCC | 1 cut(s) | 515 |
| NdeII | GATC | 4 cut(s) | 205, 613, 796, 979 |
| NlaIII | CATG | 3 cut(s) | 514, 637, 1051 |
| NlaIV | GGNNCC | 3 cut(s) | 172, 516, 738 |
| NmeAIII | GCCGAG | 1 cut(s) | 610 |
| NmuCI | GTSAC | 2 cut(s) | 386, 1039 |
| NspI | RCATGY | 1 cut(s) | 637 |
| PciI | ACATGT | 1 cut(s) | 633 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 222 |
| PdmI | GAANNNNTTC | 2 cut(s) | 233, 635 |
| PfeI | GAWTC | 6 cut(s) | 10, 131, 470, 521, 643, 932 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 905 |
| PinAI | ACCGGT | 1 cut(s) | 604 |
| PleI | GAGTC | 1 cut(s) | 553 |
| PluTI | GGCGCC | 1 cut(s) | 518 |
| PpsI | GAGTC | 1 cut(s) | 553 |
| Ppu21I | YACGTR | 1 cut(s) | 331 |
| PpuMI | RGGWCCY | 1 cut(s) | 736 |
| PscI | ACATGT | 1 cut(s) | 633 |
| Psp124BI | GAGCTC | 1 cut(s) | 831 |
| Psp5II | RGGWCCY | 1 cut(s) | 736 |
| Psp6I | CCWGG | 1 cut(s) | 408 |
| PspGI | CCWGG | 1 cut(s) | 408 |
| PspN4I | GGNNCC | 3 cut(s) | 172, 516, 738 |
| PspPI | GGNCC | 2 cut(s) | 736, 848 |
| PspPPI | RGGWCCY | 1 cut(s) | 736 |
| PvuII | CAGCTG | 1 cut(s) | 994 |
| RsaI | GTAC | 2 cut(s) | 254, 509 |
| RsaNI | GTAC | 2 cut(s) | 253, 508 |
| SacI | GAGCTC | 1 cut(s) | 831 |
| SaqAI | TTAA | 1 cut(s) | 528 |
| Sau3AI | GATC | 4 cut(s) | 205, 613, 796, 979 |
| Sau96I | GGNCC | 2 cut(s) | 736, 848 |
| SchI | GAGTC | 1 cut(s) | 554 |
| ScrFI | CCNGG | 1 cut(s) | 410 |
| SduI | GDGCHC | 2 cut(s) | 345, 831 |
| SetI | ASST | 9 cut(s) | 87, 285, 305, 333, 399, 408, 486, 831, 996 |
| SfaNI | GCATC | 1 cut(s) | 753 |
| SfcI | CTRYAG | 1 cut(s) | 1029 |
| SfoI | GGCGCC | 1 cut(s) | 516 |
| SinI | GGWCC | 1 cut(s) | 736 |
| SmlI | CTYRAG | 1 cut(s) | 137 |
| SmoI | CTYRAG | 1 cut(s) | 137 |
| Sse9I | AATT | 7 cut(s) | 311, 356, 678, 891, 902, 925, 1015 |
| SspDI | GGCGCC | 1 cut(s) | 514 |
| SstI | GAGCTC | 1 cut(s) | 831 |
| StyD4I | CCNGG | 1 cut(s) | 408 |
| TaaI | ACNGT | 3 cut(s) | 214, 386, 805 |
| TaiI | ACGT | 3 cut(s) | 333, 408, 486 |
| TaqI | TCGA | 7 cut(s) | 216, 322, 486, 855, 875, 942, 953 |
| TasI | AATT | 7 cut(s) | 311, 356, 678, 891, 902, 925, 1015 |
| TatI | WGTACW | 1 cut(s) | 507 |
| TauI | GCSGC | 9 cut(s) | 94, 264, 267, 431, 505, 663, 676, 977, 991 |
| TfiI | GAWTC | 6 cut(s) | 10, 131, 470, 521, 643, 932 |
| Tru1I | TTAA | 1 cut(s) | 528 |
| Tru9I | TTAA | 1 cut(s) | 528 |
| TscAI | CASTG | 2 cut(s) | 389, 808 |
| TseFI | GTSAC | 2 cut(s) | 386, 1039 |
| TseI | GCWGC | 2 cut(s) | 56, 991 |
| Tsp45I | GTSAC | 2 cut(s) | 386, 1039 |
| TspDTI | ATGAA | 1 cut(s) | 349 |
| TspGWI | ACGGA | 3 cut(s) | 179, 514, 1016 |
| TspRI | CASTG | 2 cut(s) | 389, 808 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 905 |
| VpaK11BI | GGWCC | 1 cut(s) | 736 |
| XapI | RAATTY | 5 cut(s) | 311, 356, 678, 891, 925 |
| XceI | RCATGY | 1 cut(s) | 637 |
| XmnI | GAANNNNTTC | 2 cut(s) | 233, 635 |