Mitogen-activated protein kinase kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50310 AT4G36950 AT5G67080 |
| fragaria_vesca | FvH4_1g16150 |
| malus_domestica | MD02G1173600.v1.1 MD15G1285100.v1.1 |
| prunus_persica | Prupe.2G016400_v2.0.a1 Prupe.3G259700_v2.0.a1 Prupe.7G132100_v2.0.a1 |
| pyrus_communis | pycom02g14000 |
| rosa_chinensis | RchiOBHm_Chr2g0105831 |
| rosa_laevigata | RLG00000017463 |
| rosa_multiflora | Rmu_sc0004386.1_g000026 |
| rosa_roxburghii | Rroxscaffold_2G00137860 |
| rosa_rugosa | Rorug02G0130700 |
| rosa_samantha | Rh2AG181800 Rh2BG191600 Rh2CG186200 Rh2DG188200 |
| rosa_wichuraiana | Rw2G014250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 514 |
| AciI | CCGC | 9 cut(s) | 57, 89, 129, 190, 297, 308, 674, 971, 985 |
| AclI | AACGTT | 1 cut(s) | 405 |
| AclWI | GGATC | 2 cut(s) | 621, 984 |
| AcoI | YGGCCR | 3 cut(s) | 99, 273, 429 |
| AcsI | RAATTY | 5 cut(s) | 230, 334, 678, 885, 928 |
| AcuI | CTGAAG | 1 cut(s) | 383 |
| AcyI | GRCGYC | 2 cut(s) | 515, 798 |
| AfaI | GTAC | 2 cut(s) | 268, 542 |
| AfeI | AGCGCT | 1 cut(s) | 749 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 447, 862 |
| AgsI | TTSAA | 2 cut(s) | 640, 928 |
| AjiI | CACGTC | 1 cut(s) | 391 |
| AjnI | CCWGG | 1 cut(s) | 156 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1004, 1036 |
| AluBI | AGCT | 4 cut(s) | 39, 283, 397, 823 |
| AluI | AGCT | 4 cut(s) | 39, 283, 397, 823 |
| Alw21I | GWGCWC | 2 cut(s) | 285, 345 |
| Alw26I | GTCTC | 3 cut(s) | 766, 946, 998 |
| AlwI | GGATC | 2 cut(s) | 621, 984 |
| Ama87I | CYCGRG | 2 cut(s) | 622, 739 |
| Aor51HI | AGCGCT | 1 cut(s) | 749 |
| AoxI | GGCC | 5 cut(s) | 99, 273, 349, 429, 841 |
| ApeKI | GCWGC | 2 cut(s) | 192, 988 |
| ApoI | RAATTY | 5 cut(s) | 230, 334, 678, 885, 928 |
| AspLEI | GCGC | 4 cut(s) | 66, 517, 629, 750 |
| AspS9I | GGNCC | 3 cut(s) | 160, 736, 842 |
| AsuC2I | CCSGG | 3 cut(s) | 623, 624, 934 |
| AsuHPI | GGTGA | 1 cut(s) | 819 |
| AsuNHI | GCTAGC | 1 cut(s) | 991 |
| AvaI | CYCGRG | 2 cut(s) | 622, 739 |
| AvaII | GGWCC | 2 cut(s) | 160, 736 |
| BalI | TGGCCA | 1 cut(s) | 431 |
| BanI | GGYRCC | 1 cut(s) | 514 |
| BanII | GRGCYC | 2 cut(s) | 285, 568 |
| Bbv12I | GWGCWC | 2 cut(s) | 285, 345 |
| BbvI | GCAGC | 2 cut(s) | 179, 975 |
| BccI | CCATC | 6 cut(s) | 56, 82, 91, 583, 838, 865 |
| BceAI | ACGGC | 5 cut(s) | 86, 238, 310, 771, 785 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 533, 567 |
| BciT130I | CCWGG | 1 cut(s) | 158 |
| BcnI | CCSGG | 3 cut(s) | 623, 624, 934 |
| BcoDI | GTCTC | 3 cut(s) | 766, 946, 998 |
| BfaI | CTAG | 1 cut(s) | 992 |
| BfoI | RGCGCY | 2 cut(s) | 518, 751 |
| BisI | GCNGC | 4 cut(s) | 193, 674, 986, 989 |
| BlsI | GCNGC | 4 cut(s) | 194, 675, 987, 990 |
| Bme1390I | CCNGG | 4 cut(s) | 158, 623, 624, 934 |
| Bme18I | GGWCC | 2 cut(s) | 160, 736 |
| BmeT110I | CYCGRG | 2 cut(s) | 622, 739 |
| BmgBI | CACGTC | 1 cut(s) | 391 |
| BmgT120I | GGNCC | 3 cut(s) | 160, 736, 842 |
| BmiI | GGNNCC | 2 cut(s) | 516, 738 |
| BmrFI | CCNGG | 4 cut(s) | 158, 623, 624, 934 |
| BmsI | GCATC | 2 cut(s) | 234, 753 |
| BmtI | GCTAGC | 1 cut(s) | 995 |
| BpmI | CTGGAG | 2 cut(s) | 269, 1047 |
| BpuEI | CTTGAG | 1 cut(s) | 269 |
| BpuMI | CCSGG | 3 cut(s) | 623, 624, 934 |
| Bsa29I | ATCGAT | 1 cut(s) | 979 |
| BsaBI | GATNNNNATC | 1 cut(s) | 653 |
| BsaHI | GRCGYC | 2 cut(s) | 515, 798 |
| BsaJI | CCNNGG | 4 cut(s) | 132, 352, 622, 996 |
| BsaWI | WCCGGW | 1 cut(s) | 260 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1020, 1050 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 447, 862 |
| Bse1I | ACTGG | 1 cut(s) | 605 |
| Bse8I | GATNNNNATC | 1 cut(s) | 653 |
| BseBI | CCWGG | 1 cut(s) | 158 |
| BseCI | ATCGAT | 1 cut(s) | 979 |
| BseDI | CCNNGG | 4 cut(s) | 132, 352, 622, 996 |
| BseGI | GGATG | 2 cut(s) | 186, 775 |
| BseJI | GATNNNNATC | 1 cut(s) | 653 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 447, 862 |
| BseMII | CTCAG | 2 cut(s) | 750, 761 |
| BseNI | ACTGG | 1 cut(s) | 605 |
| BseRI | GAGGAG | 1 cut(s) | 1016 |
| BseXI | GCAGC | 2 cut(s) | 179, 975 |
| Bsh1285I | CGRYCG | 4 cut(s) | 31, 138, 261, 301 |
| BshFI | GGCC | 5 cut(s) | 101, 275, 351, 431, 843 |
| BshNI | GGYRCC | 1 cut(s) | 514 |
| BshVI | ATCGAT | 1 cut(s) | 979 |
| BsiEI | CGRYCG | 4 cut(s) | 31, 138, 261, 301 |
| BsiHKAI | GWGCWC | 2 cut(s) | 285, 345 |
| BsiHKCI | CYCGRG | 2 cut(s) | 622, 739 |
| BsiSI | CCGG | 4 cut(s) | 261, 623, 933, 968 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 447, 862 |
| BsmAI | GTCTC | 3 cut(s) | 766, 946, 998 |
| BsnI | GGCC | 5 cut(s) | 101, 275, 351, 431, 843 |
| BsoBI | CYCGRG | 2 cut(s) | 622, 739 |
| Bsp1286I | GDGCHC | 3 cut(s) | 285, 345, 568 |
| Bsp143I | GATC | 4 cut(s) | 205, 435, 613, 976 |
| BspACI | CCGC | 9 cut(s) | 57, 89, 129, 190, 297, 308, 674, 971, 985 |
| BspANI | GGCC | 5 cut(s) | 101, 275, 351, 431, 843 |
| BspCNI | CTCAG | 2 cut(s) | 751, 762 |
| BspDI | ATCGAT | 1 cut(s) | 979 |
| BspLI | GGNNCC | 2 cut(s) | 516, 738 |
| BspOI | GCTAGC | 1 cut(s) | 995 |
| BspPI | GGATC | 2 cut(s) | 621, 984 |
| BspT107I | GGYRCC | 1 cut(s) | 514 |
| BsrI | ACTGG | 1 cut(s) | 605 |
| BssECI | CCNNGG | 4 cut(s) | 132, 352, 622, 996 |
| BssMI | GATC | 4 cut(s) | 205, 435, 613, 976 |
| BssNI | GRCGYC | 2 cut(s) | 515, 798 |
| Bst2UI | CCWGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 2 cut(s) | 214, 1042 |
| BstACI | GRCGYC | 2 cut(s) | 515, 798 |
| BstC8I | GCNNGC | 2 cut(s) | 453, 993 |
| BstDEI | CTNAG | 2 cut(s) | 759, 770 |
| BstDSI | CCRYGG | 1 cut(s) | 996 |
| BstF5I | GGATG | 2 cut(s) | 186, 775 |
| BstH2I | RGCGCY | 2 cut(s) | 518, 751 |
| BstHHI | GCGC | 4 cut(s) | 66, 517, 629, 750 |
| BstKTI | GATC | 4 cut(s) | 208, 438, 616, 979 |
| BstMAI | GTCTC | 3 cut(s) | 766, 946, 998 |
| BstMBI | GATC | 4 cut(s) | 205, 435, 613, 976 |
| BstMCI | CGRYCG | 4 cut(s) | 31, 138, 261, 301 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 470, 590 |
| BstNI | CCWGG | 1 cut(s) | 158 |
| BstSCI | CCNGG | 4 cut(s) | 156, 621, 622, 932 |
| BstV1I | GCAGC | 2 cut(s) | 179, 975 |
| Bsu15I | ATCGAT | 1 cut(s) | 979 |
| BsuRI | GGCC | 5 cut(s) | 101, 275, 351, 431, 843 |
| BsuTUI | ATCGAT | 1 cut(s) | 979 |
| BtgI | CCRYGG | 1 cut(s) | 996 |
| BtrI | CACGTC | 1 cut(s) | 391 |
| BtsCI | GGATG | 2 cut(s) | 186, 775 |
| BtsI | GCAGTG | 1 cut(s) | 382 |
| BtsIMutI | CAGTG | 1 cut(s) | 382 |
| Cac8I | GCNNGC | 2 cut(s) | 453, 993 |
| CfoI | GCGC | 4 cut(s) | 66, 517, 629, 750 |
| Cfr13I | GGNCC | 3 cut(s) | 160, 736, 842 |
| Cfr9I | CCCGGG | 1 cut(s) | 622 |
| ClaI | ATCGAT | 1 cut(s) | 979 |
| CseI | GACGC | 1 cut(s) | 806 |
| Csp6I | GTAC | 2 cut(s) | 267, 541 |
| CviQI | GTAC | 2 cut(s) | 267, 541 |
| DdeI | CTNAG | 2 cut(s) | 759, 770 |
| DinI | GGCGCC | 1 cut(s) | 516 |
| DpnI | GATC | 4 cut(s) | 207, 437, 615, 978 |
| DpnII | GATC | 4 cut(s) | 205, 435, 613, 976 |
| EaeI | YGGCCR | 3 cut(s) | 99, 273, 429 |
| EciI | GGCGGA | 3 cut(s) | 78, 118, 323 |
| Ecl136II | GAGCTC | 1 cut(s) | 283 |
| Eco147I | AGGCCT | 1 cut(s) | 351 |
| Eco24I | GRGCYC | 2 cut(s) | 285, 568 |
| Eco47I | GGWCC | 2 cut(s) | 160, 736 |
| Eco47III | AGCGCT | 1 cut(s) | 749 |
| Eco53kI | GAGCTC | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 1 cut(s) | 383 |
| Eco88I | CYCGRG | 2 cut(s) | 622, 739 |
| EcoICRI | GAGCTC | 1 cut(s) | 283 |
| EcoO109I | RGGNCCY | 1 cut(s) | 736 |
| EcoRI | GAATTC | 1 cut(s) | 928 |
| EcoRII | CCWGG | 1 cut(s) | 156 |
| EcoT38I | GRGCYC | 2 cut(s) | 285, 568 |
| EgeI | GGCGCC | 1 cut(s) | 516 |
| EheI | GGCGCC | 1 cut(s) | 516 |
| FaiI | YATR | 3 cut(s) | 255, 510, 512 |
| Fnu4HI | GCNGC | 4 cut(s) | 193, 674, 986, 989 |
| FokI | GGATG | 2 cut(s) | 173, 762 |
| FriOI | GRGCYC | 2 cut(s) | 285, 568 |
| Fsp4HI | GCNGC | 4 cut(s) | 193, 674, 986, 989 |
| FspBI | CTAG | 1 cut(s) | 992 |
| GlaI | GCGC | 4 cut(s) | 65, 516, 628, 749 |
| GluI | GCNGC | 4 cut(s) | 193, 674, 986, 989 |
| GsuI | CTGGAG | 2 cut(s) | 269, 1047 |
| HaeII | RGCGCY | 2 cut(s) | 518, 751 |
| HaeIII | GGCC | 5 cut(s) | 101, 275, 351, 431, 843 |
| HapII | CCGG | 4 cut(s) | 261, 623, 933, 968 |
| HgaI | GACGC | 1 cut(s) | 806 |
| HhaI | GCGC | 4 cut(s) | 66, 517, 629, 750 |
| Hin1I | GRCGYC | 2 cut(s) | 515, 798 |
| Hin6I | GCGC | 4 cut(s) | 64, 515, 627, 748 |
| HinP1I | GCGC | 4 cut(s) | 64, 515, 627, 748 |
| HincII | GTYRAC | 1 cut(s) | 529 |
| HindII | GTYRAC | 1 cut(s) | 529 |
| HindIII | AAGCTT | 2 cut(s) | 37, 395 |
| HinfI | GANTC | 5 cut(s) | 116, 153, 521, 545, 654 |
| HpaI | GTTAAC | 1 cut(s) | 529 |
| HpaII | CCGG | 4 cut(s) | 261, 623, 933, 968 |
| HphI | GGTGA | 1 cut(s) | 819 |
| Hpy166II | GTNNAC | 3 cut(s) | 364, 382, 529 |
| Hpy188III | TCNNGA | 6 cut(s) | 139, 286, 646, 683, 951, 1026 |
| Hpy8I | GTNNAC | 3 cut(s) | 364, 382, 529 |
| Hpy99I | CGWCG | 5 cut(s) | 281, 327, 392, 800, 952 |
| HpyAV | CCTTC | 1 cut(s) | 695 |
| HpyCH4III | ACNGT | 2 cut(s) | 214, 1042 |
| HpyCH4IV | ACGT | 3 cut(s) | 390, 405, 558 |
| HpyCH4V | TGCA | 1 cut(s) | 584 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 470, 590 |
| HpyF3I | CTNAG | 2 cut(s) | 759, 770 |
| HpySE526I | ACGT | 3 cut(s) | 390, 405, 558 |
| Hsp92I | GRCGYC | 2 cut(s) | 515, 798 |
| HspAI | GCGC | 4 cut(s) | 64, 515, 627, 748 |
| KasI | GGCGCC | 1 cut(s) | 514 |
| KspAI | GTTAAC | 1 cut(s) | 529 |
| Kzo9I | GATC | 4 cut(s) | 205, 435, 613, 976 |
| Lsp1109I | GCAGC | 2 cut(s) | 179, 975 |
| LweI | GCATC | 2 cut(s) | 234, 753 |
| MaeI | CTAG | 1 cut(s) | 992 |
| MaeII | ACGT | 3 cut(s) | 390, 405, 558 |
| MaeIII | GTNAC | 1 cut(s) | 1036 |
| MalI | GATC | 4 cut(s) | 207, 437, 615, 978 |
| MboI | GATC | 4 cut(s) | 205, 435, 613, 976 |
| MboII | GAAGA | 4 cut(s) | 69, 469, 710, 824 |
| MfeI | CAATTG | 1 cut(s) | 1012 |
| MhlI | GDGCHC | 3 cut(s) | 285, 345, 568 |
| MlsI | TGGCCA | 1 cut(s) | 431 |
| MluCI | AATT | 9 cut(s) | 165, 230, 238, 334, 678, 790, 885, 928, 1012 |
| MluNI | TGGCCA | 1 cut(s) | 431 |
| Mly113I | GGCGCC | 1 cut(s) | 515 |
| MlyI | GAGTC | 1 cut(s) | 554 |
| MmeI | TCCRAC | 1 cut(s) | 789 |
| MnlI | CCTC | 9 cut(s) | 142, 211, 220, 257, 362, 488, 679, 833, 994 |
| Mox20I | TGGCCA | 1 cut(s) | 431 |
| MscI | TGGCCA | 1 cut(s) | 431 |
| MseI | TTAA | 1 cut(s) | 528 |
| Msp20I | TGGCCA | 1 cut(s) | 431 |
| MspA1I | CMGCKG | 1 cut(s) | 192 |
| MspI | CCGG | 4 cut(s) | 261, 623, 933, 968 |
| MspR9I | CCNGG | 4 cut(s) | 158, 623, 624, 934 |
| MunI | CAATTG | 1 cut(s) | 1012 |
| MvaI | CCWGG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 437, 461, 470, 590 |
| NarI | GGCGCC | 1 cut(s) | 515 |
| NciI | CCSGG | 3 cut(s) | 623, 624, 934 |
| NdeII | GATC | 4 cut(s) | 205, 435, 613, 976 |
| NheI | GCTAGC | 1 cut(s) | 991 |
| NlaIV | GGNNCC | 2 cut(s) | 516, 738 |
| NmeAIII | GCCGAG | 1 cut(s) | 333 |
| NmuCI | GTSAC | 1 cut(s) | 1036 |
| PceI | AGGCCT | 1 cut(s) | 351 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 222 |
| PfeI | GAWTC | 4 cut(s) | 116, 153, 521, 654 |
| PfoI | TCCNGGA | 1 cut(s) | 156 |
| PkrI | GCNGC | 4 cut(s) | 194, 675, 987, 990 |
| PleI | GAGTC | 1 cut(s) | 553 |
| PluTI | GGCGCC | 1 cut(s) | 518 |
| PpsI | GAGTC | 1 cut(s) | 553 |
| PpuMI | RGGWCCY | 1 cut(s) | 736 |
| Psp124BI | GAGCTC | 1 cut(s) | 285 |
| Psp1406I | AACGTT | 1 cut(s) | 405 |
| Psp5II | RGGWCCY | 1 cut(s) | 736 |
| Psp6I | CCWGG | 1 cut(s) | 156 |
| PspGI | CCWGG | 1 cut(s) | 156 |
| PspN4I | GGNNCC | 2 cut(s) | 516, 738 |
| PspPI | GGNCC | 3 cut(s) | 160, 736, 842 |
| PspPPI | RGGWCCY | 1 cut(s) | 736 |
| RsaI | GTAC | 2 cut(s) | 268, 542 |
| RsaNI | GTAC | 2 cut(s) | 267, 541 |
| SacI | GAGCTC | 1 cut(s) | 285 |
| SaqAI | TTAA | 1 cut(s) | 528 |
| SatI | GCNGC | 4 cut(s) | 193, 674, 986, 989 |
| Sau3AI | GATC | 4 cut(s) | 205, 435, 613, 976 |
| Sau96I | GGNCC | 3 cut(s) | 160, 736, 842 |
| SchI | GAGTC | 1 cut(s) | 554 |
| ScrFI | CCNGG | 4 cut(s) | 158, 623, 624, 934 |
| SduI | GDGCHC | 3 cut(s) | 285, 345, 568 |
| SetI | ASST | 8 cut(s) | 41, 268, 285, 393, 399, 408, 561, 825 |
| SfaNI | GCATC | 2 cut(s) | 234, 753 |
| SfoI | GGCGCC | 1 cut(s) | 516 |
| SinI | GGWCC | 2 cut(s) | 160, 736 |
| SmaI | CCCGGG | 1 cut(s) | 624 |
| SmlI | CTYRAG | 1 cut(s) | 284 |
| SmoI | CTYRAG | 1 cut(s) | 284 |
| SrfI | GCCCGGGC | 1 cut(s) | 624 |
| Sse9I | AATT | 9 cut(s) | 165, 230, 238, 334, 678, 790, 885, 928, 1012 |
| SseBI | AGGCCT | 1 cut(s) | 351 |
| SsiI | CCGC | 9 cut(s) | 57, 89, 129, 190, 297, 308, 674, 971, 985 |
| SspDI | GGCGCC | 1 cut(s) | 514 |
| SspI | AATATT | 1 cut(s) | 634 |
| SspMI | CTAG | 1 cut(s) | 992 |
| SstI | GAGCTC | 1 cut(s) | 285 |
| StuI | AGGCCT | 1 cut(s) | 351 |
| StyD4I | CCNGG | 4 cut(s) | 156, 621, 622, 932 |
| TaaI | ACNGT | 2 cut(s) | 214, 1042 |
| TaiI | ACGT | 3 cut(s) | 393, 408, 561 |
| TaqI | TCGA | 7 cut(s) | 138, 216, 322, 417, 869, 950, 979 |
| TaqII | GACCGA | 2 cut(s) | 17, 124 |
| TasI | AATT | 9 cut(s) | 165, 230, 238, 334, 678, 790, 885, 928, 1012 |
| TauI | GCSGC | 2 cut(s) | 676, 988 |
| TfiI | GAWTC | 4 cut(s) | 116, 153, 521, 654 |
| Tru1I | TTAA | 1 cut(s) | 528 |
| Tru9I | TTAA | 1 cut(s) | 528 |
| TscAI | CASTG | 1 cut(s) | 389 |
| TseFI | GTSAC | 1 cut(s) | 1036 |
| TseI | GCWGC | 2 cut(s) | 192, 988 |
| Tsp45I | GTSAC | 1 cut(s) | 1036 |
| TspDTI | ATGAA | 1 cut(s) | 879 |
| TspGWI | ACGGA | 1 cut(s) | 1013 |
| TspMI | CCCGGG | 1 cut(s) | 622 |
| TspRI | CASTG | 1 cut(s) | 389 |
| VpaK11BI | GGWCC | 2 cut(s) | 160, 736 |
| XapI | RAATTY | 5 cut(s) | 230, 334, 678, 885, 928 |
| XmaI | CCCGGG | 1 cut(s) | 622 |
| XspI | CTAG | 1 cut(s) | 992 |