At4g38062-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38062 |
| fragaria_vesca | FvH4_1g19631 FvH4_1g19631 FvH4_1g19631 FvH4_2g11711 FvH4_2g11711 FvH4_2g11711 |
| malus_domestica | MD01G1039400.v1.1 MD05G1047500.v1.1 MD10G1054400.v1.1 |
| prunus_persica | Prupe.6G201700_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1 |
| pyrus_communis | pycom01g06710 pycom05g03950 |
| rosa_chinensis | RchiOBHm_Chr2g0111201 RchiOBHm_Chr6g0261381 RchiOBHm_Chr6g0271001 |
| rosa_laevigata | RLG00000002078 RLG00000013754 RLG00000017873 |
| rosa_multiflora | Rmu_co8194982.1_g000001 Rmu_co8518461.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00132630 Rroxscaffold_3G00237190 Rroxscaffold_7G00197440 |
| rosa_rugosa | Rorug02G0171500 Rorug06G0057600 Rorug07G0206900 Rorug07G0206900 |
| rosa_samantha | Rh2AG224600 Rh2BG236400 Rh2CG227600 Rh2DG232200 Rh6AG177300 Rh6BG180700 Rh6CG176700 Rh6DG168900 Rh7BG338900 Rh7BG339000 |
| rosa_wichuraiana | Rw2G017340 Rw6G015120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1176 |
| Acc16I | TGCGCA | 1 cut(s) | 2475 |
| Acc36I | ACCTGC | 1 cut(s) | 2244 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2746 |
| AccI | GTMKAC | 2 cut(s) | 2027, 2407 |
| AccII | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| AciI | CCGC | 4 cut(s) | 443, 982, 2239, 2675 |
| AclI | AACGTT | 1 cut(s) | 226 |
| AclWI | GGATC | 3 cut(s) | 729, 1039, 1512 |
| AcoI | YGGCCR | 1 cut(s) | 1431 |
| AcsI | RAATTY | 6 cut(s) | 314, 806, 1753, 2125, 2168, 2664 |
| AcuI | CTGAAG | 5 cut(s) | 668, 710, 2172, 2856, 3138 |
| AfaI | GTAC | 2 cut(s) | 308, 1738 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 2179, 2379, 2380, 2746 |
| AflII | CTTAAG | 1 cut(s) | 608 |
| AjnI | CCWGG | 2 cut(s) | 1011, 2538 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2294, 2326, 2549, 2581 |
| Alw21I | GWGCWC | 2 cut(s) | 1139, 1881 |
| Alw26I | GTCTC | 8 cut(s) | 133, 440, 764, 901, 1255, 1318, 2738, 2982 |
| AlwI | GGATC | 3 cut(s) | 729, 1039, 1512 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2236, 2746 |
| Ama87I | CYCGRG | 1 cut(s) | 2219 |
| AoxI | GGCC | 1 cut(s) | 1431 |
| ApeKI | GCWGC | 7 cut(s) | 1202, 1405, 1424, 1843, 2596, 2599, 2602 |
| ApoI | RAATTY | 6 cut(s) | 314, 806, 1753, 2125, 2168, 2664 |
| AseI | ATTAAT | 2 cut(s) | 119, 1167 |
| AspLEI | GCGC | 3 cut(s) | 1441, 1464, 2476 |
| AsuC2I | CCSGG | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 3 cut(s) | 2498, 3074, 3120 |
| AsuII | TTCGAA | 1 cut(s) | 1512 |
| AvaI | CYCGRG | 1 cut(s) | 2219 |
| BalI | TGGCCA | 1 cut(s) | 1433 |
| BanII | GRGCYC | 3 cut(s) | 423, 1139, 1881 |
| BbsI | GAAGAC | 3 cut(s) | 1937, 2891, 3126 |
| Bbv12I | GWGCWC | 2 cut(s) | 1139, 1881 |
| BbvI | GCAGC | 7 cut(s) | 1214, 1411, 1417, 1855, 2583, 2586, 2614 |
| BccI | CCATC | 8 cut(s) | 517, 1147, 1393, 1438, 1756, 2957, 2978, 3029 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1454, 1488 |
| BciT130I | CCWGG | 2 cut(s) | 1013, 2540 |
| BclI | TGATCA | 2 cut(s) | 1999, 2703 |
| BcnI | CCSGG | 1 cut(s) | 311 |
| BcoDI | GTCTC | 8 cut(s) | 133, 440, 764, 901, 1255, 1318, 2738, 2982 |
| BfaI | CTAG | 9 cut(s) | 183, 360, 708, 968, 1409, 1578, 2114, 2658, 2730 |
| BfmI | CTRYAG | 8 cut(s) | 64, 400, 438, 1248, 1265, 1882, 2408, 2600 |
| BfrI | CTTAAG | 1 cut(s) | 608 |
| BfuAI | ACCTGC | 1 cut(s) | 2244 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1913 |
| BglII | AGATCT | 1 cut(s) | 1278 |
| BisI | GCNGC | 7 cut(s) | 1203, 1406, 1425, 1844, 2597, 2600, 2603 |
| BlsI | GCNGC | 7 cut(s) | 1204, 1407, 1426, 1845, 2598, 2601, 2604 |
| Bme1390I | CCNGG | 3 cut(s) | 311, 1013, 2540 |
| BmeT110I | CYCGRG | 1 cut(s) | 2219 |
| BmrFI | CCNGG | 3 cut(s) | 311, 1013, 2540 |
| BmsI | GCATC | 7 cut(s) | 592, 817, 919, 1521, 1584, 1645, 1782 |
| BpiI | GAAGAC | 3 cut(s) | 1937, 2891, 3126 |
| BpmI | CTGGAG | 2 cut(s) | 995, 1817 |
| Bpu10I | CCTNAGC | 2 cut(s) | 53, 1344 |
| Bpu14I | TTCGAA | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 7 cut(s) | 107, 401, 608, 937, 1125, 2039, 2477 |
| BpuMI | CCSGG | 1 cut(s) | 311 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2702 |
| BsaI | GGTCTC | 2 cut(s) | 764, 1318 |
| BsaJI | CCNNGG | 2 cut(s) | 1317, 1434 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 935, 965 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 2179, 2379, 2380, 2746 |
| Bse1I | ACTGG | 3 cut(s) | 147, 1434, 2751 |
| Bse3DI | GCAATG | 2 cut(s) | 1896, 3096 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2702 |
| BseBI | CCWGG | 2 cut(s) | 1013, 2540 |
| BseDI | CCNNGG | 2 cut(s) | 1317, 1434 |
| BseGI | GGATG | 4 cut(s) | 358, 1369, 2467, 2968 |
| BseJI | GATNNNNATC | 1 cut(s) | 2702 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 2179, 2379, 2380, 2746 |
| BseMI | GCAATG | 2 cut(s) | 1896, 3096 |
| BseMII | CTCAG | 8 cut(s) | 399, 456, 729, 1337, 1604, 1790, 2097, 2749 |
| BseNI | ACTGG | 3 cut(s) | 147, 1434, 2751 |
| BseRI | GAGGAG | 6 cut(s) | 188, 338, 542, 545, 1844, 2036 |
| BseXI | GCAGC | 7 cut(s) | 1214, 1411, 1417, 1855, 2583, 2586, 2614 |
| BseYI | CCCAGC | 1 cut(s) | 991 |
| BsgI | GTGCAG | 2 cut(s) | 1029, 1410 |
| Bsh1236I | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| BshFI | GGCC | 1 cut(s) | 1433 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1139, 1881 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2219 |
| BsiSI | CCGG | 1 cut(s) | 310 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 2179, 2379, 2380, 2746 |
| BsmAI | GTCTC | 8 cut(s) | 133, 440, 764, 901, 1255, 1318, 2738, 2982 |
| BsmBI | CGTCTC | 1 cut(s) | 440 |
| BsmI | GAATGC | 2 cut(s) | 1345, 1426 |
| BsnI | GGCC | 1 cut(s) | 1433 |
| Bso31I | GGTCTC | 2 cut(s) | 764, 1318 |
| BsoBI | CYCGRG | 1 cut(s) | 2219 |
| Bsp119I | TTCGAA | 1 cut(s) | 1512 |
| Bsp1286I | GDGCHC | 3 cut(s) | 423, 1139, 1881 |
| Bsp68I | TCGCGA | 1 cut(s) | 2909 |
| BspACI | CCGC | 4 cut(s) | 443, 982, 2239, 2675 |
| BspANI | GGCC | 1 cut(s) | 1433 |
| BspCNI | CTCAG | 8 cut(s) | 400, 457, 728, 1336, 1603, 1789, 2098, 2748 |
| BspFNI | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| BspMAI | CTGCAG | 1 cut(s) | 2604 |
| BspMI | ACCTGC | 1 cut(s) | 2244 |
| BspPI | GGATC | 3 cut(s) | 729, 1039, 1512 |
| BspQI | GCTCTTC | 4 cut(s) | 12, 1249, 1452, 1971 |
| BspT104I | TTCGAA | 1 cut(s) | 1512 |
| BspTI | CTTAAG | 1 cut(s) | 608 |
| BspTNI | GGTCTC | 2 cut(s) | 764, 1318 |
| BsrDI | GCAATG | 2 cut(s) | 1896, 3096 |
| BsrI | ACTGG | 3 cut(s) | 147, 1434, 2751 |
| BssECI | CCNNGG | 2 cut(s) | 1317, 1434 |
| BssT1I | CCWWGG | 1 cut(s) | 1434 |
| Bst2UI | CCWGG | 2 cut(s) | 1013, 2540 |
| Bst4CI | ACNGT | 6 cut(s) | 475, 752, 1100, 1269, 1312, 1741 |
| BstAFI | CTTAAG | 1 cut(s) | 608 |
| BstBI | TTCGAA | 1 cut(s) | 1512 |
| BstC8I | GCNNGC | 2 cut(s) | 207, 1335 |
| BstEII | GGTNACC | 1 cut(s) | 3126 |
| BstF5I | GGATG | 4 cut(s) | 358, 1369, 2467, 2968 |
| BstFNI | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| BstHHI | GCGC | 3 cut(s) | 1441, 1464, 2476 |
| BstMAI | GTCTC | 8 cut(s) | 133, 440, 764, 901, 1255, 1318, 2738, 2982 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 427, 580, 1430, 1840, 1913, 1993, 2602, 2608, 2860 |
| BstNI | CCWGG | 2 cut(s) | 1013, 2540 |
| BstNSI | RCATGY | 1 cut(s) | 2629 |
| BstPI | GGTNACC | 1 cut(s) | 3126 |
| BstSCI | CCNGG | 3 cut(s) | 309, 1011, 2538 |
| BstSFI | CTRYAG | 8 cut(s) | 64, 400, 438, 1248, 1265, 1882, 2408, 2600 |
| BstUI | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| BstV1I | GCAGC | 7 cut(s) | 1214, 1411, 1417, 1855, 2583, 2586, 2614 |
| BstV2I | GAAGAC | 3 cut(s) | 1937, 2891, 3126 |
| BstX2I | RGATCY | 3 cut(s) | 721, 1278, 1504 |
| BstYI | RGATCY | 3 cut(s) | 721, 1278, 1504 |
| BsuRI | GGCC | 1 cut(s) | 1433 |
| BtsCI | GGATG | 4 cut(s) | 358, 1369, 2467, 2968 |
| BtsI | GCAGTG | 1 cut(s) | 2652 |
| BtsIMutI | CAGTG | 2 cut(s) | 1427, 2652 |
| BtuMI | TCGCGA | 1 cut(s) | 2909 |
| BveI | ACCTGC | 1 cut(s) | 2244 |
| Cac8I | GCNNGC | 2 cut(s) | 207, 1335 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2236, 2746 |
| CfoI | GCGC | 3 cut(s) | 1441, 1464, 2476 |
| CseI | GACGC | 1 cut(s) | 857 |
| Csp6I | GTAC | 2 cut(s) | 307, 1737 |
| CviAII | CATG | 7 cut(s) | 158, 922, 2339, 2561, 2626, 2640, 3098 |
| CviQI | GTAC | 2 cut(s) | 307, 1737 |
| EaeI | YGGCCR | 1 cut(s) | 1431 |
| Ecl136II | GAGCTC | 2 cut(s) | 1137, 1879 |
| Eco130I | CCWWGG | 1 cut(s) | 1434 |
| Eco24I | GRGCYC | 3 cut(s) | 423, 1139, 1881 |
| Eco31I | GGTCTC | 2 cut(s) | 764, 1318 |
| Eco53kI | GAGCTC | 2 cut(s) | 1137, 1879 |
| Eco57I | CTGAAG | 5 cut(s) | 668, 710, 2172, 2856, 3138 |
| Eco88I | CYCGRG | 1 cut(s) | 2219 |
| Eco91I | GGTNACC | 1 cut(s) | 3126 |
| EcoICRI | GAGCTC | 2 cut(s) | 1137, 1879 |
| EcoO65I | GGTNACC | 1 cut(s) | 3126 |
| EcoRI | GAATTC | 2 cut(s) | 806, 2168 |
| EcoRII | CCWGG | 2 cut(s) | 1011, 2538 |
| EcoT14I | CCWWGG | 1 cut(s) | 1434 |
| EcoT22I | ATGCAT | 2 cut(s) | 934, 1660 |
| EcoT38I | GRGCYC | 3 cut(s) | 423, 1139, 1881 |
| ErhI | CCWWGG | 1 cut(s) | 1434 |
| Esp3I | CGTCTC | 1 cut(s) | 440 |
| FaeI | CATG | 7 cut(s) | 161, 925, 2342, 2564, 2629, 2643, 3101 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1623, 1655, 2244, 2276, 2358, 2390, 2427, 2459 |
| FatI | CATG | 7 cut(s) | 157, 921, 2338, 2560, 2625, 2639, 3097 |
| FauNDI | CATATG | 3 cut(s) | 598, 1903, 2478 |
| FbaI | TGATCA | 2 cut(s) | 1999, 2703 |
| FblI | GTMKAC | 2 cut(s) | 2027, 2407 |
| Fnu4HI | GCNGC | 7 cut(s) | 1203, 1406, 1425, 1844, 2597, 2600, 2603 |
| FokI | GGATG | 4 cut(s) | 365, 1376, 2474, 2975 |
| FriOI | GRGCYC | 3 cut(s) | 423, 1139, 1881 |
| Fsp4HI | GCNGC | 7 cut(s) | 1203, 1406, 1425, 1844, 2597, 2600, 2603 |
| FspBI | CTAG | 9 cut(s) | 183, 360, 708, 968, 1409, 1578, 2114, 2658, 2730 |
| FspI | TGCGCA | 1 cut(s) | 2475 |
| GlaI | GCGC | 3 cut(s) | 1440, 1463, 2475 |
| GluI | GCNGC | 7 cut(s) | 1203, 1406, 1425, 1844, 2597, 2600, 2603 |
| GsaI | CCCAGC | 1 cut(s) | 995 |
| GsuI | CTGGAG | 2 cut(s) | 995, 1817 |
| HaeIII | GGCC | 1 cut(s) | 1433 |
| HapII | CCGG | 1 cut(s) | 310 |
| HgaI | GACGC | 1 cut(s) | 857 |
| HhaI | GCGC | 3 cut(s) | 1441, 1464, 2476 |
| Hin1II | CATG | 7 cut(s) | 161, 925, 2342, 2564, 2629, 2643, 3101 |
| Hin6I | GCGC | 3 cut(s) | 1439, 1462, 2474 |
| HinP1I | GCGC | 3 cut(s) | 1439, 1462, 2474 |
| HincII | GTYRAC | 4 cut(s) | 148, 759, 2623, 2919 |
| HindII | GTYRAC | 4 cut(s) | 148, 759, 2623, 2919 |
| HindIII | AAGCTT | 5 cut(s) | 50, 281, 605, 659, 2253 |
| HpaI | GTTAAC | 2 cut(s) | 148, 2623 |
| HpaII | CCGG | 1 cut(s) | 310 |
| HphI | GGTGA | 3 cut(s) | 2498, 3074, 3120 |
| Hpy166II | GTNNAC | 7 cut(s) | 148, 759, 1894, 2028, 2408, 2623, 2919 |
| Hpy8I | GTNNAC | 7 cut(s) | 148, 759, 1894, 2028, 2408, 2623, 2919 |
| Hpy99I | CGWCG | 1 cut(s) | 2758 |
| HpyAV | CCTTC | 7 cut(s) | 235, 481, 562, 1370, 1693, 2442, 2711 |
| HpyCH4III | ACNGT | 6 cut(s) | 475, 752, 1100, 1269, 1312, 1741 |
| HpyCH4IV | ACGT | 3 cut(s) | 226, 2100, 2753 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 427, 580, 1430, 1840, 1913, 1993, 2602, 2608, 2860 |
| HpySE526I | ACGT | 3 cut(s) | 226, 2100, 2753 |
| Hsp92II | CATG | 7 cut(s) | 161, 925, 2342, 2564, 2629, 2643, 3101 |
| HspAI | GCGC | 3 cut(s) | 1439, 1462, 2474 |
| Ksp22I | TGATCA | 2 cut(s) | 1999, 2703 |
| KspAI | GTTAAC | 2 cut(s) | 148, 2623 |
| LguI | GCTCTTC | 4 cut(s) | 12, 1249, 1452, 1971 |
| LmnI | GCTCC | 7 cut(s) | 79, 571, 1134, 1402, 1831, 1993, 2452 |
| Lsp1109I | GCAGC | 7 cut(s) | 1214, 1411, 1417, 1855, 2583, 2586, 2614 |
| LweI | GCATC | 7 cut(s) | 592, 817, 919, 1521, 1584, 1645, 1782 |
| MaeI | CTAG | 9 cut(s) | 183, 360, 708, 968, 1409, 1578, 2114, 2658, 2730 |
| MaeII | ACGT | 3 cut(s) | 226, 2100, 2753 |
| MaeIII | GTNAC | 7 cut(s) | 703, 746, 1728, 2839, 3019, 3112, 3126 |
| MfeI | CAATTG | 1 cut(s) | 2174 |
| MflI | RGATCY | 3 cut(s) | 721, 1278, 1504 |
| MhlI | GDGCHC | 3 cut(s) | 423, 1139, 1881 |
| MlsI | TGGCCA | 1 cut(s) | 1433 |
| MluNI | TGGCCA | 1 cut(s) | 1433 |
| MlyI | GAGTC | 6 cut(s) | 547, 1736, 1967, 2033, 2072, 2432 |
| MmeI | TCCRAC | 6 cut(s) | 1203, 1884, 2254, 2260, 2379, 2409 |
| Mox20I | TGGCCA | 1 cut(s) | 1433 |
| Mph1103I | ATGCAT | 2 cut(s) | 934, 1660 |
| MscI | TGGCCA | 1 cut(s) | 1433 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2849 |
| Msp20I | TGGCCA | 1 cut(s) | 1433 |
| MspCI | CTTAAG | 1 cut(s) | 608 |
| MspI | CCGG | 1 cut(s) | 310 |
| MspR9I | CCNGG | 3 cut(s) | 311, 1013, 2540 |
| MunI | CAATTG | 1 cut(s) | 2174 |
| Mva1269I | GAATGC | 2 cut(s) | 1345, 1426 |
| MvaI | CCWGG | 2 cut(s) | 1013, 2540 |
| MvnI | CGCG | 4 cut(s) | 984, 1464, 1695, 2909 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 427, 580, 1430, 1840, 1913, 1993, 2602, 2608, 2860 |
| NciI | CCSGG | 1 cut(s) | 311 |
| NdeI | CATATG | 3 cut(s) | 598, 1903, 2478 |
| NlaIII | CATG | 7 cut(s) | 161, 925, 2342, 2564, 2629, 2643, 3101 |
| NmeAIII | GCCGAG | 1 cut(s) | 220 |
| NmuCI | GTSAC | 2 cut(s) | 1728, 3126 |
| NruI | TCGCGA | 1 cut(s) | 2909 |
| NsbI | TGCGCA | 1 cut(s) | 2475 |
| NsiI | ATGCAT | 2 cut(s) | 934, 1660 |
| NspI | RCATGY | 1 cut(s) | 2629 |
| NspV | TTCGAA | 1 cut(s) | 1512 |
| PaeR7I | CTCGAG | 1 cut(s) | 2219 |
| PciSI | GCTCTTC | 4 cut(s) | 12, 1249, 1452, 1971 |
| PctI | GAATGC | 2 cut(s) | 1345, 1426 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2746 |
| PfoI | TCCNGGA | 1 cut(s) | 1011 |
| PkrI | GCNGC | 7 cut(s) | 1204, 1407, 1426, 1845, 2598, 2601, 2604 |
| PleI | GAGTC | 6 cut(s) | 546, 1735, 1966, 2032, 2072, 2432 |
| PpsI | GAGTC | 6 cut(s) | 546, 1735, 1966, 2032, 2072, 2432 |
| PshBI | ATTAAT | 2 cut(s) | 119, 1167 |
| PsiI | TTATAA | 1 cut(s) | 1176 |
| Psp124BI | GAGCTC | 2 cut(s) | 1139, 1881 |
| Psp1406I | AACGTT | 1 cut(s) | 226 |
| Psp6I | CCWGG | 2 cut(s) | 1011, 2538 |
| PspEI | GGTNACC | 1 cut(s) | 3126 |
| PspFI | CCCAGC | 1 cut(s) | 991 |
| PspGI | CCWGG | 2 cut(s) | 1011, 2538 |
| PspXI | VCTCGAGB | 1 cut(s) | 2219 |
| PstI | CTGCAG | 1 cut(s) | 2604 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2236, 2746 |
| PsuI | RGATCY | 3 cut(s) | 721, 1278, 1504 |
| RruI | TCGCGA | 1 cut(s) | 2909 |
| RsaI | GTAC | 2 cut(s) | 308, 1738 |
| RsaNI | GTAC | 2 cut(s) | 307, 1737 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2849 |
| SacI | GAGCTC | 2 cut(s) | 1139, 1881 |
| SapI | GCTCTTC | 4 cut(s) | 12, 1249, 1452, 1971 |
| SatI | GCNGC | 7 cut(s) | 1203, 1406, 1425, 1844, 2597, 2600, 2603 |
| SchI | GAGTC | 6 cut(s) | 547, 1736, 1967, 2033, 2072, 2432 |
| ScrFI | CCNGG | 3 cut(s) | 311, 1013, 2540 |
| SduI | GDGCHC | 3 cut(s) | 423, 1139, 1881 |
| SfaNI | GCATC | 7 cut(s) | 592, 817, 919, 1521, 1584, 1645, 1782 |
| SfcI | CTRYAG | 8 cut(s) | 64, 400, 438, 1248, 1265, 1882, 2408, 2600 |
| Sfr274I | CTCGAG | 1 cut(s) | 2219 |
| SfuI | TTCGAA | 1 cut(s) | 1512 |
| SlaI | CTCGAG | 1 cut(s) | 2219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2849 |
| SmlI | CTYRAG | 9 cut(s) | 86, 380, 587, 608, 916, 1140, 2018, 2219, 2456 |
| SmoI | CTYRAG | 9 cut(s) | 86, 380, 587, 608, 916, 1140, 2018, 2219, 2456 |
| SsiI | CCGC | 4 cut(s) | 443, 982, 2239, 2675 |
| SspI | AATATT | 2 cut(s) | 1525, 1870 |
| SspMI | CTAG | 9 cut(s) | 183, 360, 708, 968, 1409, 1578, 2114, 2658, 2730 |
| SstI | GAGCTC | 2 cut(s) | 1139, 1881 |
| StyD4I | CCNGG | 3 cut(s) | 309, 1011, 2538 |
| StyI | CCWWGG | 1 cut(s) | 1434 |
| TaaI | ACNGT | 6 cut(s) | 475, 752, 1100, 1269, 1312, 1741 |
| TaiI | ACGT | 3 cut(s) | 229, 2103, 2756 |
| TaqI | TCGA | 7 cut(s) | 130, 1283, 1512, 2081, 2220, 2690, 2756 |
| TscAI | CASTG | 2 cut(s) | 1434, 2659 |
| TseFI | GTSAC | 2 cut(s) | 1728, 3126 |
| TseI | GCWGC | 7 cut(s) | 1202, 1405, 1424, 1843, 2596, 2599, 2602 |
| Tsp45I | GTSAC | 2 cut(s) | 1728, 3126 |
| TspGWI | ACGGA | 1 cut(s) | 92 |
| TspRI | CASTG | 2 cut(s) | 1434, 2659 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2746 |
| Vha464I | CTTAAG | 1 cut(s) | 608 |
| VspI | ATTAAT | 2 cut(s) | 119, 1167 |
| XapI | RAATTY | 6 cut(s) | 314, 806, 1753, 2125, 2168, 2664 |
| XbaI | TCTAGA | 3 cut(s) | 182, 1577, 2113 |
| XceI | RCATGY | 1 cut(s) | 2629 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1441 |
| XhoI | CTCGAG | 1 cut(s) | 2219 |
| XmiI | GTMKAC | 2 cut(s) | 2027, 2407 |
| XspI | CTAG | 9 cut(s) | 183, 360, 708, 968, 1409, 1578, 2114, 2658, 2730 |
| Zsp2I | ATGCAT | 2 cut(s) | 934, 1660 |