Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002136

Physical Location & Seq

Genomic Coordinates Reverse (-)

13513657 .. 13517947

Gene Structure 4291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1039400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2922 bp

ATGGATAAGGTTTACGAAGAGTTGGACGAAGTTAAAGCTGAGCTTGAGAAGCTCAGGGCAGAATATAAAAGCAAAGCAGAACTATACGAAAGCTTGAGGAAAGCACACAATGAGCAGCTCACTAAATTCCAGCAGGCAAGTTCCAAAATCGAGCAACAGACTCAAGAACTAAACGAGAAGGCAGAGAAAATCTCGGTGGCACAGCAGATGTGTGAAGATCTTAAATGCACTTTGAAAGAGAAAGAGTCCATAGTTCAACATCTCAGGGCTGCAAACGATAAACTTCGAGTTGATTGTCATGAGAAGTTCAGAAAATTGGAAGATACGAACAGAGCGTTGGCATTGGCTTTAGATGAGGCAAATGAAAAGAAAATGGATCAAGAGCAAACAGTTTGTGCATATAAAGATGAGATTAAAGACCTCAAAGGCAGTCTATCAGTCTCACAGAGGAAATGGTCGGAAGCAGAAAAGAAAGCAAATGCACCCAAAGAGCTGAGAGAAAGAAATGAGGTGATACTCAAACTAGAGGAGGAAAGTCAGAAAGTTCAAGATAAACTAAAATGGAAGACGGAGCAGTTCAGACATCTGGAAGAAGCACACAACAAGCTACGTGAACAGTTCAAGGCTAGTAAGAAGGAATGGGAGACGGAGAAGTCTTCATTGCTCGATGAGATTTGTCAATTGCAGACAAGTTTTGATTCTAAAACCCAAATTTTAGATGATCTTCAAAACCGGCTGCAGAGGTGCAACCAAGCCCTGGCTCATGAAGAAAGCCGGAGAAAGTATCTGGAGGTTCAAGTTTCTGAATTCCAAACACGCTTTGAGAACGTCTTTATTGATCGTGAGCATACCAAATTGCAGCTGGAATGCTTGACTGCTCAGAGGGACAAACAAATTGCATCACTAAGACAGTCTCTAAGCACCAAAGAGGCACTTCATAAAGAAATGGGATATCAAACAAGGAAGCTGGAACAAGAAAATCAGGAGTTGCGAGCTTCGCTCAAAGAACTCCAGGAAGCCCAAATCCAATCAGCACCAGGTTCACCTTCTCTGGCAAAGCTACGAAACAAGCTCAAAAGTTTGGAGCAGATGCACAGAGAATCTGTTGCCAATCATAGGGCTAAAGAAGCTGAATGGAGCTCTCAACTGGAAAGTATGACGGCAGACCTGAACAACCATAAATCTGAGTTAAAGAGTAAAGGTGCAGCATTAGAAGAGCTTAGGATGGAAGTGGAGCAGATGCACAGGGACCGCACAGAAAATTGGCCCAACAGAGTTGTATGCAACTCTCAACTAGAAAAGATGACGAGTGATGTGCACAACTATATGAATGAGCTAGAGAGTAAAGATGCAACGATAAAAGAGCTCGAGATGGAGTTGGAATCCAGTCATTTTCTAAGTATGCAGCTAAAGTTGGAAAATGAGGAGCTTTCCGTCATGTTATTGGTTTTAAAACTTGGAATTTCTGAGGCACAGTTGAAGATTGCAAATGAGAAGTCTGAAATGGATAGGCATGATAAAGAGAACGAAGAAAAGATTTCTGTGTTGATGCAACAGCTGGAGATGAAGAATGATGGTCTTATTATAGCACGGGTAGGTACTGAAGAAGAGCATGAAAAGGCAGCATCTTTATCAAGTAGAATTGAAGTTATGGATCTCATTGATAACCAGAAGCTTCCTATACAGAAAGAAGTTGAAAGAGAGCTTAGAGAAGTTAATGATGCCTTAGAGAGAGCAAATGTTGTGTTGGATGAAAAAATATTTGAAGAAAATGAAATTGAATTCGAATTGCAAATGTGGAAATCGATTGCAGAGCGCTTAAGAAGTGATCTTGAAGCAAGTGTAGGAATGCGTAAAGAGTTGGAAGCTTCTCTTCTTGCACAGGTAGAAGTCGAGGAAACCATAAAGCAACAAAAAAAGGGTCTTCTTTCTATTTTTGAAGAGAAAGACAAAATAATAGATAACCTCCAGGAGAAGATCGTGTTACTGGAGCAGAAGCTTGACAATGCTGAGTCAGTAAAGACAGAGGCATCGATGTCCTTTGAGTCACAGAATTCAATCTTTCTCCAATTCACAAGAGCGAAGGACAAGAACTTTGAGCAACTTGAGAAAGAGGTCCACTGGCTAGAGCAGGAATCATTGAGAAGGGAATTCGCAGGTCTCGTGATGGCACAAACTGATGCAGAGAGAACATTTGAGTATGAGAAAGAGAAACTCATCCAGCATGTCGAAGAGAAATACCAGAGACTGAATGTTCTTCTCCAGCTTGTGGAGTCCTTGGAACACAAGTTTAACTGCTCATTAGCTTCTTTCTCTTCACAGCTAGCCGAGAAACAGGCAGAAATTGATATGATTTATGAAGCTTGGGAGAAAATCACTGCTGCTGAGGTTATGGCTGCACTTGAAATTGAAGAAAAGAAATTGATGGCCGTGGAACTTGAGGAGGAAATCTGTAATATACAGCGGAAACTCGAATCACAACAAAAATCCTTGTGCAAGTCAAAACAGCAAGCATTGGAGGTTGAAGCTCAGTTGGAAACAAAAGAGCAGGAAGTGAAGAGACTGACTAATCAAATGAAGACAAAGCTAATAAACTCGGATCCCTTGGTTGAGGAGCTCAAGAATAAAAGAAGAAATTTACTTGAAGATGTCATTCAGTTGTCATCGGAAAAGGAAAATTTATTGCGGTTTATAGGAGGGCTGGGTGATAAGATCGGGGAGTTCTCCACTAAAGATAAACAACTGATAGGAATGTTGGAAAGGATAATGCTCTCTTTTGACGACAAAGGTTCAGGAATGGATTTGAAATGGAATGATGAACTTGTTGATCCAGAACAAGAGAATGTGCGTACGCCTATCATCGTCAAGATATCTGAAGCCATTTCTGATCAAAGATCTCCATTTAGAGACCTCAACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

974

Amino Acids

113.66

Weight (kDa)

5.15

Isoelectric Point (pI)

46.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002136)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38062
fragaria_vesca	FvH4_1g19631 FvH4_1g19631 FvH4_1g19631 FvH4_2g11711 FvH4_2g11711 FvH4_2g11711
malus_domestica	MD01G1039400.v1.1 MD05G1047500.v1.1 MD10G1054400.v1.1
prunus_persica	Prupe.6G201700_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1 Prupe.8G069900_v2.0.a1
pyrus_communis	pycom01g06710 pycom05g03950
rosa_chinensis	RchiOBHm_Chr2g0111201 RchiOBHm_Chr6g0261381 RchiOBHm_Chr6g0271001
rosa_laevigata	RLG00000002078 RLG00000013754 RLG00000017873
rosa_multiflora	Rmu_co8194982.1_g000001 Rmu_co8518461.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132630 Rroxscaffold_3G00237190 Rroxscaffold_7G00197440
rosa_rugosa	Rorug02G0171500 Rorug06G0057600 Rorug07G0206900 Rorug07G0206900
rosa_samantha	Rh2AG224600 Rh2BG236400 Rh2CG227600 Rh2DG232200 Rh6AG177300 Rh6BG180700 Rh6CG176700 Rh6DG168900 Rh7BG338900 Rh7BG339000
rosa_wichuraiana	Rw2G017340 Rw6G015120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	652
Acc36I	ACCTGC	1 cut(s)	2147
AccB7I	CCANNNNNTGG	2 cut(s)	757, 2269
AciI	CCGC	3 cut(s)	1252, 2464, 2686
AclWI	GGATC	5 cut(s)	384, 1662, 2594, 2607, 2822
AcoI	YGGCCR	1 cut(s)	2427
AcsI	RAATTY	9 cut(s)	125, 711, 806, 1461, 1781, 2053, 2150, 2635, 2677
AcuI	CTGAAG	2 cut(s)	1623, 2895
AfaI	GTAC	2 cut(s)	1600, 2851
AfeI	AGCGCT	1 cut(s)	1817
AfiI	CCNNNNNNNGG	3 cut(s)	757, 1116, 2269
AflII	CTTAAG	1 cut(s)	1819
AjnI	CCWGG	4 cut(s)	756, 1011, 1036, 1968
AjuI	GAANNNNNNNTTGG	2 cut(s)	320, 352
Alw21I	GWGCWC	4 cut(s)	1142, 1320, 1368, 2619
Alw26I	GTCTC	7 cut(s)	445, 638, 918, 2165, 2239, 2554, 2901
Alw44I	GTGCAC	1 cut(s)	1316
AlwI	GGATC	5 cut(s)	384, 1662, 2594, 2607, 2822
AlwNI	CAGNNNCTG	1 cut(s)	2248
Ama87I	CYCGRG	1 cut(s)	1367
Aor51HI	AGCGCT	1 cut(s)	1817
AoxI	GGCC	2 cut(s)	1265, 2427
ApaLI	GTGCAC	1 cut(s)	1316
ApeKI	GCWGC	9 cut(s)	115, 269, 736, 859, 1205, 1405, 1622, 2381, 2396
ApoI	RAATTY	9 cut(s)	125, 711, 806, 1461, 1781, 2053, 2150, 2635, 2677
ArsI	GACNNNNNNTTYG	6 cut(s)	1481, 1513, 1906, 1938, 2078, 2110
AspLEI	GCGC	1 cut(s)	1818
AspS9I	GGNCC	3 cut(s)	1249, 1266, 2116
AsuHPI	GGTGA	3 cut(s)	523, 1035, 2717
AsuII	TTCGAA	1 cut(s)	1785
AsuNHI	GCTAGC	1 cut(s)	2323
AvaI	CYCGRG	1 cut(s)	1367
AvaII	GGWCC	2 cut(s)	1249, 2116
BaeGI	GKGCMC	1 cut(s)	1320
BamHI	GGATCC	1 cut(s)	2599
BanII	GRGCYC	3 cut(s)	1142, 1368, 2619
BauI	CACGAG	1 cut(s)	2162
BbsI	GAAGAC	4 cut(s)	572, 648, 1916, 2585
Bbv12I	GWGCWC	4 cut(s)	1142, 1320, 1368, 2619
BbvCI	CCTCAGC	1 cut(s)	2385
BbvI	GCAGC	9 cut(s)	127, 256, 723, 871, 1217, 1417, 1634, 2368, 2383
BccI	CCATC	5 cut(s)	1219, 1366, 1568, 2161, 2419
BceAI	ACGGC	2 cut(s)	1176, 2414
BcgI	CGANNNNNNTGC	2 cut(s)	1297, 1331
BciT130I	CCWGG	4 cut(s)	758, 1013, 1038, 1970
BclI	TGATCA	1 cut(s)	2887
BcoDI	GTCTC	7 cut(s)	445, 638, 918, 2165, 2239, 2554, 2901
BfaI	CTAG	6 cut(s)	524, 627, 1295, 1337, 2126, 2324
BfmI	CTRYAG	1 cut(s)	737
BfoI	RGCGCY	1 cut(s)	1819
BfrI	CTTAAG	1 cut(s)	1819
BfuAI	ACCTGC	1 cut(s)	2147
BglII	AGATCT	2 cut(s)	217, 2894
BisI	GCNGC	9 cut(s)	116, 270, 737, 860, 1206, 1406, 1623, 2382, 2397
BlpI	GCTNAGC	1 cut(s)	39
BlsI	GCNGC	9 cut(s)	117, 271, 738, 861, 1207, 1407, 1624, 2383, 2398
Bme1390I	CCNGG	4 cut(s)	758, 1013, 1038, 1970
Bme18I	GGWCC	2 cut(s)	1249, 2116
BmeT110I	CYCGRG	1 cut(s)	1367
BmgT120I	GGNCC	3 cut(s)	1249, 1266, 2116
BmiI	GGNNCC	2 cut(s)	1250, 2601
BmrFI	CCNGG	4 cut(s)	758, 1013, 1038, 1970
BmsI	GCATC	9 cut(s)	908, 1080, 1230, 1339, 1539, 1634, 1711, 2039, 2170
BmtI	GCTAGC	1 cut(s)	2327
BpiI	GAAGAC	4 cut(s)	572, 648, 1916, 2585
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 984, 1016
BpmI	CTGGAG	6 cut(s)	809, 995, 1580, 1952, 2009, 2246
Bpu10I	CCTNAGC	3 cut(s)	53, 1220, 2385
Bpu1102I	GCTNAGC	1 cut(s)	39
Bpu14I	TTCGAA	1 cut(s)	1785
BpuEI	CTTGAG	6 cut(s)	65, 115, 147, 2126, 2459, 2603
Bsa29I	ATCGAT	2 cut(s)	1805, 2033
BsaAI	YACGTR	1 cut(s)	611
BsaI	GGTCTC	2 cut(s)	2165, 2901
BsaJI	CCNNGG	4 cut(s)	756, 2277, 2430, 2604
Bsc4I	CCNNNNNNNGG	3 cut(s)	757, 1116, 2269
Bse118I	RCCGGY	1 cut(s)	732
Bse1I	ACTGG	4 cut(s)	1152, 1386, 1992, 2126
Bse3DI	GCAATG	1 cut(s)	659
BseBI	CCWGG	4 cut(s)	758, 1013, 1038, 1970
BseCI	ATCGAT	2 cut(s)	1805, 2033
BseDI	CCNNGG	4 cut(s)	756, 2277, 2430, 2604
BseGI	GGATG	3 cut(s)	1230, 1756, 2217
BseLI	CCNNNNNNNGG	3 cut(s)	757, 1116, 2269
BseMI	GCAATG	1 cut(s)	659
BseNI	ACTGG	4 cut(s)	1152, 1386, 1992, 2126
BseRI	GAGGAG	4 cut(s)	542, 1439, 2456, 2627
BseSI	GKGCMC	1 cut(s)	1320
BseXI	GCAGC	9 cut(s)	127, 256, 723, 871, 1217, 1417, 1634, 2368, 2383
BseYI	CCCAGC	1 cut(s)	2701
BsgI	GTGCAG	2 cut(s)	1224, 2382
BshFI	GGCC	2 cut(s)	1267, 2429
BshVI	ATCGAT	2 cut(s)	1805, 2033
BsiHKAI	GWGCWC	4 cut(s)	1142, 1320, 1368, 2619
BsiHKCI	CYCGRG	1 cut(s)	1367
BsiSI	CCGG	2 cut(s)	733, 775
BsiWI	CGTACG	1 cut(s)	2849
BslFI	GGGAC	2 cut(s)	899, 1262
BslI	CCNNNNNNNGG	3 cut(s)	757, 1116, 2269
BsmAI	GTCTC	7 cut(s)	445, 638, 918, 2165, 2239, 2554, 2901
BsmBI	CGTCTC	1 cut(s)	638
BsmFI	GGGAC	2 cut(s)	899, 1262
BsmI	GAATGC	2 cut(s)	872, 1854
BsnI	GGCC	2 cut(s)	1267, 2429
Bso31I	GGTCTC	2 cut(s)	2165, 2901
BsoBI	CYCGRG	1 cut(s)	1367
Bsp119I	TTCGAA	1 cut(s)	1785
Bsp1286I	GDGCHC	4 cut(s)	1142, 1320, 1368, 2619
Bsp1720I	GCTNAGC	1 cut(s)	39
BspACI	CCGC	3 cut(s)	1252, 2464, 2686
BspANI	GGCC	2 cut(s)	1267, 2429
BspDI	ATCGAT	2 cut(s)	1805, 2033
BspHI	TCATGA	2 cut(s)	298, 763
BspLI	GGNNCC	2 cut(s)	1250, 2601
BspMAI	CTGCAG	1 cut(s)	741
BspMI	ACCTGC	1 cut(s)	2147
BspOI	GCTAGC	1 cut(s)	2327
BspPI	GGATC	5 cut(s)	384, 1662, 2594, 2607, 2822
BspQI	GCTCTTC	2 cut(s)	1209, 1602
BspT104I	TTCGAA	1 cut(s)	1785
BspTI	CTTAAG	1 cut(s)	1819
BspTNI	GGTCTC	2 cut(s)	2165, 2901
BsrDI	GCAATG	1 cut(s)	659
BsrFI	RCCGGY	1 cut(s)	732
BsrI	ACTGG	4 cut(s)	1152, 1386, 1992, 2126
BssAI	RCCGGY	1 cut(s)	732
BssECI	CCNNGG	4 cut(s)	756, 2277, 2430, 2604
BssSI	CACGAG	1 cut(s)	2162
BssT1I	CCWWGG	2 cut(s)	2277, 2604
Bst2BI	CACGAG	1 cut(s)	2162
Bst2UI	CCWGG	4 cut(s)	758, 1013, 1038, 1970
Bst4CI	ACNGT	4 cut(s)	391, 618, 912, 1476
Bst6I	CTCTTC	8 cut(s)	12, 1209, 1602, 1878, 1935, 2226, 2320, 2552
BstAFI	CTTAAG	1 cut(s)	1819
BstBAI	YACGTR	1 cut(s)	611
BstBI	TTCGAA	1 cut(s)	1785
BstC8I	GCNNGC	4 cut(s)	135, 993, 2325, 2511
BstDSI	CCRYGG	1 cut(s)	2430
BstF5I	GGATG	3 cut(s)	1230, 1756, 2217
BstH2I	RGCGCY	1 cut(s)	1819
BstHHI	GCGC	1 cut(s)	1818
BstMAI	GTCTC	7 cut(s)	445, 638, 918, 2165, 2239, 2554, 2901
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 997, 1127
BstNI	CCWGG	4 cut(s)	758, 1013, 1038, 1970
BstNSI	RCATGY	1 cut(s)	2228
BstSCI	CCNGG	4 cut(s)	756, 1011, 1036, 1968
BstSFI	CTRYAG	1 cut(s)	737
BstSLI	GKGCMC	1 cut(s)	1320
BstV1I	GCAGC	9 cut(s)	127, 256, 723, 871, 1217, 1417, 1634, 2368, 2383
BstV2I	GAAGAC	4 cut(s)	572, 648, 1916, 2585
BstX2I	RGATCY	4 cut(s)	217, 1654, 2599, 2894
BstYI	RGATCY	4 cut(s)	217, 1654, 2599, 2894
Bsu15I	ATCGAT	2 cut(s)	1805, 2033
BsuRI	GGCC	2 cut(s)	1267, 2429
BsuTUI	ATCGAT	2 cut(s)	1805, 2033
BtgI	CCRYGG	1 cut(s)	2430
BtsCI	GGATG	3 cut(s)	1230, 1756, 2217
BtsI	GCAGTG	1 cut(s)	2376
BtsIMutI	CAGTG	2 cut(s)	2119, 2376
BveI	ACCTGC	1 cut(s)	2147
Cac8I	GCNNGC	4 cut(s)	135, 993, 2325, 2511
CaiI	CAGNNNCTG	1 cut(s)	2248
CciI	TCATGA	2 cut(s)	298, 763
CfoI	GCGC	1 cut(s)	1818
Cfr10I	RCCGGY	1 cut(s)	732
Cfr13I	GGNCC	3 cut(s)	1249, 1266, 2116
ClaI	ATCGAT	2 cut(s)	1805, 2033
CsiI	ACCWGGT	1 cut(s)	1036
Csp6I	GTAC	2 cut(s)	1599, 2850
CviAII	CATG	6 cut(s)	299, 764, 1438, 1514, 1613, 2225
CviQI	GTAC	2 cut(s)	1599, 2850
DraI	TTTAAA	1 cut(s)	1452
DrdI	GACNNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	1 cut(s)	652
EaeI	YGGCCR	1 cut(s)	2427
Eam1104I	CTCTTC	8 cut(s)	12, 1209, 1602, 1878, 1935, 2226, 2320, 2552
EarI	CTCTTC	8 cut(s)	12, 1209, 1602, 1878, 1935, 2226, 2320, 2552
Ecl136II	GAGCTC	3 cut(s)	1140, 1366, 2617
Eco130I	CCWWGG	2 cut(s)	2277, 2604
Eco24I	GRGCYC	3 cut(s)	1142, 1368, 2619
Eco31I	GGTCTC	2 cut(s)	2165, 2901
Eco32I	GATATC	2 cut(s)	953, 2871
Eco47I	GGWCC	2 cut(s)	1249, 2116
Eco47III	AGCGCT	1 cut(s)	1817
Eco53kI	GAGCTC	3 cut(s)	1140, 1366, 2617
Eco57I	CTGAAG	2 cut(s)	1623, 2895
Eco88I	CYCGRG	1 cut(s)	1367
EcoICRI	GAGCTC	3 cut(s)	1140, 1366, 2617
EcoRI	GAATTC	4 cut(s)	806, 1781, 2053, 2150
EcoRII	CCWGG	4 cut(s)	756, 1011, 1036, 1968
EcoRV	GATATC	2 cut(s)	953, 2871
EcoT14I	CCWWGG	2 cut(s)	2277, 2604
EcoT38I	GRGCYC	3 cut(s)	1142, 1368, 2619
ErhI	CCWWGG	2 cut(s)	2277, 2604
Esp3I	CGTCTC	1 cut(s)	638
FaeI	CATG	6 cut(s)	302, 767, 1441, 1517, 1616, 2228
FalI	AAGNNNNNCTT	6 cut(s)	27, 59, 918, 950, 1857, 1889
FaqI	GGGAC	2 cut(s)	899, 1262
FatI	CATG	6 cut(s)	298, 763, 1437, 1513, 1612, 2224
FbaI	TGATCA	1 cut(s)	2887
Fnu4HI	GCNGC	9 cut(s)	116, 270, 737, 860, 1206, 1406, 1623, 2382, 2397
FokI	GGATG	3 cut(s)	1237, 1763, 2204
FriOI	GRGCYC	3 cut(s)	1142, 1368, 2619
Fsp4HI	GCNGC	9 cut(s)	116, 270, 737, 860, 1206, 1406, 1623, 2382, 2397
FspBI	CTAG	6 cut(s)	524, 627, 1295, 1337, 2126, 2324
GlaI	GCGC	1 cut(s)	1817
GluI	GCNGC	9 cut(s)	116, 270, 737, 860, 1206, 1406, 1623, 2382, 2397
GsaI	CCCAGC	1 cut(s)	2705
GsuI	CTGGAG	6 cut(s)	809, 995, 1580, 1952, 2009, 2246
HaeII	RGCGCY	1 cut(s)	1819
HaeIII	GGCC	2 cut(s)	1267, 2429
HapII	CCGG	2 cut(s)	733, 775
HhaI	GCGC	1 cut(s)	1818
Hin1II	CATG	6 cut(s)	302, 767, 1441, 1517, 1616, 2228
Hin6I	GCGC	1 cut(s)	1816
HinP1I	GCGC	1 cut(s)	1816
HindIII	AAGCTT	5 cut(s)	91, 1673, 1866, 1997, 2361
HpaII	CCGG	2 cut(s)	733, 775
HphI	GGTGA	3 cut(s)	523, 1035, 2717
Hpy166II	GTNNAC	5 cut(s)	13, 614, 1043, 1318, 2119
Hpy8I	GTNNAC	5 cut(s)	13, 614, 1043, 1318, 2119
HpyAV	CCTTC	5 cut(s)	172, 628, 1056, 2077, 2139
HpyCH4III	ACNGT	4 cut(s)	391, 618, 912, 1476
HpyCH4IV	ACGT	2 cut(s)	610, 828
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 997, 1127
HpySE526I	ACGT	2 cut(s)	610, 828
Hsp92II	CATG	6 cut(s)	302, 767, 1441, 1517, 1616, 2228
HspAI	GCGC	1 cut(s)	1816
Ksp22I	TGATCA	1 cut(s)	2887
LguI	GCTCTTC	2 cut(s)	1209, 1602
LmnI	GCTCC	7 cut(s)	571, 1084, 1137, 1234, 1426, 1990, 2614
Lsp1109I	GCAGC	9 cut(s)	127, 256, 723, 871, 1217, 1417, 1634, 2368, 2383
LweI	GCATC	9 cut(s)	908, 1080, 1230, 1339, 1539, 1634, 1711, 2039, 2170
MabI	ACCWGGT	1 cut(s)	1036
MaeI	CTAG	6 cut(s)	524, 627, 1295, 1337, 2126, 2324
MaeII	ACGT	2 cut(s)	610, 828
MaeIII	GTNAC	2 cut(s)	1983, 2046
MfeI	CAATTG	1 cut(s)	680
MflI	RGATCY	4 cut(s)	217, 1654, 2599, 2894
MhlI	GDGCHC	4 cut(s)	1142, 1320, 1368, 2619
MlyI	GAGTC	5 cut(s)	154, 254, 2021, 2054, 2282
MmeI	TCCRAC	7 cut(s)	438, 1359, 1395, 1728, 1842, 2514, 2736
MseI	TTAA	8 cut(s)	33, 222, 414, 1190, 1451, 1716, 1820, 2292
MspA1I	CMGCKG	3 cut(s)	862, 1558, 2464
MspCI	CTTAAG	1 cut(s)	1819
MspI	CCGG	2 cut(s)	733, 775
MspR9I	CCNGG	4 cut(s)	758, 1013, 1038, 1970
MunI	CAATTG	1 cut(s)	680
Mva1269I	GAATGC	2 cut(s)	872, 1854
MvaI	CCWGG	4 cut(s)	758, 1013, 1038, 1970
MwoI	GCNNNNNNNGC	3 cut(s)	49, 997, 1127
NheI	GCTAGC	1 cut(s)	2323
NlaIII	CATG	6 cut(s)	302, 767, 1441, 1517, 1616, 2228
NlaIV	GGNNCC	2 cut(s)	1250, 2601
NmeAIII	GCCGAG	1 cut(s)	2353
NmuCI	GTSAC	1 cut(s)	2046
NspI	RCATGY	1 cut(s)	2228
NspV	TTCGAA	1 cut(s)	1785
PaeR7I	CTCGAG	1 cut(s)	1367
PagI	TCATGA	2 cut(s)	298, 763
PciSI	GCTCTTC	2 cut(s)	1209, 1602
PcsI	WCGNNNNNNNCGW	2 cut(s)	332, 2160
PctI	GAATGC	2 cut(s)	872, 1854
PfeI	GAWTC	5 cut(s)	698, 1100, 1382, 2135, 2474
Pfl23II	CGTACG	1 cut(s)	2849
PflMI	CCANNNNNTGG	2 cut(s)	757, 2269
PfoI	TCCNGGA	2 cut(s)	1011, 1968
PkrI	GCNGC	9 cut(s)	117, 271, 738, 861, 1207, 1407, 1624, 2383, 2398
PleI	GAGTC	5 cut(s)	154, 253, 2020, 2053, 2281
PpsI	GAGTC	5 cut(s)	154, 253, 2020, 2053, 2281
Ppu21I	YACGTR	1 cut(s)	611
Psp124BI	GAGCTC	3 cut(s)	1142, 1368, 2619
Psp6I	CCWGG	4 cut(s)	756, 1011, 1036, 1968
PspFI	CCCAGC	1 cut(s)	2701
PspGI	CCWGG	4 cut(s)	756, 1011, 1036, 1968
PspLI	CGTACG	1 cut(s)	2849
PspN4I	GGNNCC	2 cut(s)	1250, 2601
PspPI	GGNCC	3 cut(s)	1249, 1266, 2116
PstI	CTGCAG	1 cut(s)	741
PstNI	CAGNNNCTG	1 cut(s)	2248
PsuI	RGATCY	4 cut(s)	217, 1654, 2599, 2894
PvuII	CAGCTG	2 cut(s)	862, 1558
RsaI	GTAC	2 cut(s)	1600, 2851
RsaNI	GTAC	2 cut(s)	1599, 2850
SacI	GAGCTC	3 cut(s)	1142, 1368, 2619
SapI	GCTCTTC	2 cut(s)	1209, 1602
SaqAI	TTAA	8 cut(s)	33, 222, 414, 1190, 1451, 1716, 1820, 2292
SatI	GCNGC	9 cut(s)	116, 270, 737, 860, 1206, 1406, 1623, 2382, 2397
Sau96I	GGNCC	3 cut(s)	1249, 1266, 2116
SchI	GAGTC	5 cut(s)	154, 254, 2021, 2054, 2282
ScrFI	CCNGG	4 cut(s)	758, 1013, 1038, 1970
SduI	GDGCHC	4 cut(s)	1142, 1320, 1368, 2619
SexAI	ACCWGGT	1 cut(s)	1036
SfaNI	GCATC	9 cut(s)	908, 1080, 1230, 1339, 1539, 1634, 1711, 2039, 2170
SfcI	CTRYAG	1 cut(s)	737
Sfr274I	CTCGAG	1 cut(s)	1367
SfuI	TTCGAA	1 cut(s)	1785
SinI	GGWCC	2 cut(s)	1249, 2116
SlaI	CTCGAG	1 cut(s)	1367
SmlI	CTYRAG	8 cut(s)	44, 94, 162, 1367, 1819, 2105, 2438, 2618
SmoI	CTYRAG	8 cut(s)	44, 94, 162, 1367, 1819, 2105, 2438, 2618
SsiI	CCGC	3 cut(s)	1252, 2464, 2686
SspI	AATATT	1 cut(s)	1761
SspMI	CTAG	6 cut(s)	524, 627, 1295, 1337, 2126, 2324
SstI	GAGCTC	3 cut(s)	1142, 1368, 2619
StyD4I	CCNGG	4 cut(s)	756, 1011, 1036, 1968
StyI	CCWWGG	2 cut(s)	2277, 2604
TaaI	ACNGT	4 cut(s)	391, 618, 912, 1476
TaiI	ACGT	2 cut(s)	613, 831
TfiI	GAWTC	5 cut(s)	698, 1100, 1382, 2135, 2474
Tru1I	TTAA	8 cut(s)	33, 222, 414, 1190, 1451, 1716, 1820, 2292
Tru9I	TTAA	8 cut(s)	33, 222, 414, 1190, 1451, 1716, 1820, 2292
TscAI	CASTG	2 cut(s)	2126, 2383
TseFI	GTSAC	1 cut(s)	2046
TseI	GCWGC	9 cut(s)	115, 269, 736, 859, 1205, 1405, 1622, 2381, 2396
Tsp45I	GTSAC	1 cut(s)	2046
TspGWI	ACGGA	3 cut(s)	584, 662, 1423
TspRI	CASTG	2 cut(s)	2126, 2383
Van91I	CCANNNNNTGG	2 cut(s)	757, 2269
Vha464I	CTTAAG	1 cut(s)	1819
VneI	GTGCAC	1 cut(s)	1316
VpaK11BI	GGWCC	2 cut(s)	1249, 2116
XapI	RAATTY	9 cut(s)	125, 711, 806, 1461, 1781, 2053, 2150, 2635, 2677
XceI	RCATGY	1 cut(s)	2228
XcmI	CCANNNNNNNNNTGG	1 cut(s)	859
XhoI	CTCGAG	1 cut(s)	1367
XspI	CTAG	6 cut(s)	524, 627, 1295, 1337, 2126, 2324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.