AT4G38130

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006237
Physical Location & Seq
Reverse (-)
17896278 .. 17899509
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G38130.1

Sequence Viewer

Length: 1506 bp
ATGGATACTGGCGGCAATTCGCTGGCGTCCGGACCTGATGGTGTGAAGAGGAAAGTTTGTTATTTCTATGACCCTGAGGTCGGCAATTACTACTATGGCCAAGGTCATCCCATGAAGCCCCATCGCATCCGCATGACCCATGCCCTCCTCGCTCACTACGGTCTCCTTCAGCATATGCAGGTTCTCAAGCCCTTCCCTGCCCGCGACCGTGATCTCTGCCGCTTCCACGCCGACGACTATGTCTCTTTTCTCCGCAGCATTACCCCTGAAACCCAGCAAGATCAGATTCGCCAACTTAAGCGCTTCAATGTTGGTGAAGACTGTCCCGTCTTTGACGGCCTTTATTCCTTTTGCCAGACCTATGCTGGAGGATCTGTTGGTGGCTCTGTCAAGCTTAACCACGGCCTCTGCGATATTGCCATCAACTGGGCTGGTGGTCTCCATCACGCTAAGAAGTGCGAGGCCTCTGGCTTCTGTTACGTCAATGATATCGTCTTAGCTATCCTAGAGCTCCTTAAGCAGCATGAGCGTGTTCTTTATGTCGATATTGATATCCACCACGGGGATGGAGTGGAGGAGGCATTTTATGCTACTGACAGGGTTATGACTGTCTCGTTTCATAAATTTGGTGATTACTTTCCCGGTACAGGTCACATTCAGGATATAGGTTATGGTAGCGGAAAGTACTATTCTCTCAATGTACCACTGGATGATGGAATCGATGATGAGAGCTATCATCTGTTATTCAAGCCCATCATGGGGAAAGTTATGGAAATTTTCCGACCAGGGGCTGTGGTATTGCAATGTGGTGCTGATTCATTGTCTGGTGATAGGTTGGGGTGCTTTAATCTTTCAATCAAAGGTCATGCTGAGTGCGTCAAATTTATGAGATCGTTCAATGTTCCCCTACTGCTCTTGGGTGGTGGTGGTTACACTATCCGCAATGTTGCCCGTTGCTGGTGCTACGAGACTGGAGTTGCACTTGGAGTTGAAGTTGAAGACAAGATGCCGGAGCATGAATATTATGAATACTTTGGTCCAGACTATACACTTCACGTTGCTCCAAGTAACATGGAAAATAAGAATTCTCGTCAGATGCTTGAAGAGATTCGCAATGACCTTCTCCACAATCTCTCTAAGCTTCAGCATGCTCCAAGTGTACCATTTCAGGAAAGACCACCTGATACAGAGACTCCCGAGGTTGATGAAGACCAAGAAGATGGGGATAAAAGATGGGATCCGGATTCAGACATGGATGTTGATGATGACCGTAAACCTATACCAAGCAGAGTAAAAAGAGAAGCTGTTGAACCAGATACAAAGGACAAGGATGGACTGAAAGGAATTATGGAGCGTGGAAAAGGTTGTGAGGTGGAGGTGGATGAGAGTGGAAGCACTAAGGTTACAGGAGTAAACCCAGTGGGAGTGGAGGAAGCAAGTGTGAAAATGGAAGAGGAAGGAACAAACAAGGGTGGGGCGGAGCAGGCGTTTCCTCCTAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

501

Amino Acids

56.02

Weight (kDa)

5.14

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 324 2.9e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 77, 239, 326
Acc36I ACCTGC 1 cut(s) 169
AccB7I CCANNNNNTGG 1 cut(s) 426
AccII CGCG 1 cut(s) 204
AccIII TCCGGA 2 cut(s) 29, 1240
AciI CCGC 8 cut(s) 12, 130, 202, 220, 253, 678, 940, 1478
AclWI GGATC 3 cut(s) 379, 1232, 1245
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 4 cut(s) 623, 774, 881, 1084
AcuI CTGAAG 2 cut(s) 152, 1127
AcyI GRCGYC 1 cut(s) 26
AfaI GTAC 4 cut(s) 646, 686, 702, 1161
AfeI AGCGCT 1 cut(s) 302
AfiI CCNNNNNNNGG 8 cut(s) 80, 426, 562, 647, 758, 759, 787, 957
AflII CTTAAG 2 cut(s) 296, 515
AgsI TTSAA 8 cut(s) 307, 748, 855, 898, 992, 998, 1103, 1310
AjnI CCWGG 1 cut(s) 784
AluBI AGCT 6 cut(s) 394, 500, 511, 732, 1141, 1304
AluI AGCT 6 cut(s) 394, 500, 511, 732, 1141, 1304
Alw21I GWGCWC 1 cut(s) 513
Alw26I GTCTC 6 cut(s) 167, 247, 443, 616, 962, 1184
AlwI GGATC 3 cut(s) 379, 1232, 1245
AlwNI CAGNNNCTG 1 cut(s) 791
Ama87I CYCGRG 1 cut(s) 1196
Aor13HI TCCGGA 2 cut(s) 29, 1240
Aor51HI AGCGCT 1 cut(s) 302
AoxI GGCC 4 cut(s) 97, 337, 403, 462
ApeKI GCWGC 2 cut(s) 255, 520
ApoI RAATTY 4 cut(s) 623, 774, 881, 1084
Asp700I GAANNNNTTC 1 cut(s) 1107
AspLEI GCGC 1 cut(s) 303
AspS9I GGNCC 2 cut(s) 32, 1037
AsuC2I CCSGG 1 cut(s) 642
AsuHPI GGTGA 3 cut(s) 326, 641, 839
AvaI CYCGRG 1 cut(s) 1196
AvaII GGWCC 2 cut(s) 32, 1037
AxyI CCTNAGG 1 cut(s) 75
BalI TGGCCA 1 cut(s) 99
BamHI GGATCC 1 cut(s) 1237
BanII GRGCYC 1 cut(s) 513
BbsI GAAGAC 3 cut(s) 324, 1005, 1215
Bbv12I GWGCWC 1 cut(s) 513
BbvI GCAGC 2 cut(s) 267, 532
BceAI ACGGC 2 cut(s) 352, 418
BciT130I CCWGG 1 cut(s) 786
BcnI CCSGG 1 cut(s) 642
BcoDI GTCTC 6 cut(s) 167, 247, 443, 616, 962, 1184
BfaI CTAG 1 cut(s) 506
BfoI RGCGCY 1 cut(s) 304
BfrI CTTAAG 2 cut(s) 296, 515
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 4 cut(s) 13, 220, 256, 521
BlsI GCNGC 4 cut(s) 14, 221, 257, 522
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 2 cut(s) 642, 786
Bme18I GGWCC 2 cut(s) 32, 1037
BmeT110I CYCGRG 1 cut(s) 1196
BmgT120I GGNCC 2 cut(s) 32, 1037
BmiI GGNNCC 1 cut(s) 1239
BmrFI CCNGG 2 cut(s) 642, 786
BmrI ACTGGG 2 cut(s) 436, 1412
BmsI GCATC 3 cut(s) 135, 996, 1086
BmuI ACTGGG 2 cut(s) 436, 1412
BpiI GAAGAC 3 cut(s) 324, 1005, 1215
BpmI CTGGAG 2 cut(s) 387, 993
BpuEI CTTGAG 1 cut(s) 170
BpuMI CCSGG 1 cut(s) 642
Bsa29I ATCGAT 1 cut(s) 720
BsaHI GRCGYC 1 cut(s) 26
BsaI GGTCTC 2 cut(s) 167, 443
BsaJI CCNNGG 5 cut(s) 100, 400, 559, 785, 1197
BsaWI WCCGGW 2 cut(s) 29, 1240
BsaXI ACNNNNNCTCC 8 cut(s) 360, 390, 978, 1008, 1177, 1207, 1472, 1502
Bsc4I CCNNNNNNNGG 8 cut(s) 80, 426, 562, 647, 758, 759, 787, 957
Bse1I ACTGG 5 cut(s) 13, 431, 711, 976, 1418
Bse21I CCTNAGG 1 cut(s) 75
Bse3DI GCAATG 3 cut(s) 809, 949, 1120
BseAI TCCGGA 2 cut(s) 29, 1240
BseBI CCWGG 1 cut(s) 786
BseCI ATCGAT 1 cut(s) 720
BseDI CCNNGG 5 cut(s) 100, 400, 559, 785, 1197
BseGI GGATG 7 cut(s) 106, 126, 571, 715, 1261, 1336, 1387
BseLI CCNNNNNNNGG 8 cut(s) 80, 426, 562, 647, 758, 759, 787, 957
BseMI GCAATG 3 cut(s) 809, 949, 1120
BseMII CTCAG 2 cut(s) 66, 861
BseNI ACTGG 5 cut(s) 13, 431, 711, 976, 1418
BseRI GAGGAG 2 cut(s) 137, 590
BseXI GCAGC 2 cut(s) 267, 532
BseYI CCCAGC 1 cut(s) 273
Bsh1236I CGCG 1 cut(s) 204
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 4 cut(s) 99, 339, 405, 464
BshVI ATCGAT 1 cut(s) 720
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 1 cut(s) 513
BsiHKCI CYCGRG 1 cut(s) 1196
BsiSI CCGG 4 cut(s) 30, 642, 1010, 1241
BslFI GGGAC 1 cut(s) 309
BslI CCNNNNNNNGG 8 cut(s) 80, 426, 562, 647, 758, 759, 787, 957
BsmAI GTCTC 6 cut(s) 167, 247, 443, 616, 962, 1184
BsmFI GGGAC 1 cut(s) 309
BsnI GGCC 4 cut(s) 99, 339, 405, 464
Bso31I GGTCTC 2 cut(s) 167, 443
BsoBI CYCGRG 1 cut(s) 1196
Bsp1286I GDGCHC 1 cut(s) 513
Bsp13I TCCGGA 2 cut(s) 29, 1240
Bsp143I GATC 5 cut(s) 211, 280, 371, 890, 1237
BspACI CCGC 8 cut(s) 12, 130, 202, 220, 253, 678, 940, 1478
BspANI GGCC 4 cut(s) 99, 339, 405, 464
BspCNI CTCAG 2 cut(s) 67, 862
BspDI ATCGAT 1 cut(s) 720
BspEI TCCGGA 2 cut(s) 29, 1240
BspFNI CGCG 1 cut(s) 204
BspLI GGNNCC 1 cut(s) 1239
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 3 cut(s) 379, 1232, 1245
BspTI CTTAAG 2 cut(s) 296, 515
BspTNI GGTCTC 2 cut(s) 167, 443
BsrDI GCAATG 3 cut(s) 809, 949, 1120
BsrI ACTGG 5 cut(s) 13, 431, 711, 976, 1418
BssECI CCNNGG 5 cut(s) 100, 400, 559, 785, 1197
BssMI GATC 5 cut(s) 211, 280, 371, 890, 1237
BssNI GRCGYC 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 786
Bst4CI ACNGT 5 cut(s) 161, 209, 323, 610, 1271
Bst6I CTCTTC 3 cut(s) 41, 1098, 1446
BstACI GRCGYC 1 cut(s) 26
BstAFI CTTAAG 2 cut(s) 296, 515
BstAPI GCANNNNNTGC 1 cut(s) 587
BstC8I GCNNGC 4 cut(s) 24, 202, 1149, 1485
BstDEI CTNAG 6 cut(s) 75, 450, 496, 870, 1137, 1398
BstDSI CCRYGG 2 cut(s) 400, 559
BstF5I GGATG 7 cut(s) 106, 126, 571, 715, 1261, 1336, 1387
BstFNI CGCG 1 cut(s) 204
BstH2I RGCGCY 1 cut(s) 304
BstHHI GCGC 1 cut(s) 303
BstKTI GATC 5 cut(s) 214, 283, 374, 893, 1240
BstMAI GTCTC 6 cut(s) 167, 247, 443, 616, 962, 1184
BstMBI GATC 5 cut(s) 211, 280, 371, 890, 1237
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 5 cut(s) 149, 517, 526, 587, 1484
BstNI CCWGG 1 cut(s) 786
BstNSI RCATGY 1 cut(s) 1151
BstSCI CCNGG 2 cut(s) 640, 784
BstUI CGCG 1 cut(s) 204
BstV1I GCAGC 2 cut(s) 267, 532
BstV2I GAAGAC 3 cut(s) 324, 1005, 1215
BstX2I RGATCY 2 cut(s) 371, 1237
BstXI CCANNNNNNTGG 2 cut(s) 566, 1220
BstYI RGATCY 2 cut(s) 371, 1237
Bsu15I ATCGAT 1 cut(s) 720
Bsu36I CCTNAGG 1 cut(s) 75
BsuRI GGCC 4 cut(s) 99, 339, 405, 464
BsuTUI ATCGAT 1 cut(s) 720
BtgI CCRYGG 2 cut(s) 400, 559
BtgZI GCGATG 1 cut(s) 107
BtsCI GGATG 7 cut(s) 106, 126, 571, 715, 1261, 1336, 1387
BtsIMutI CAGTG 2 cut(s) 704, 1425
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 24, 202, 1149, 1485
CaiI CAGNNNCTG 1 cut(s) 791
CfoI GCGC 1 cut(s) 303
Cfr13I GGNCC 2 cut(s) 32, 1037
ClaI ATCGAT 1 cut(s) 720
CseI GACGC 2 cut(s) 15, 865
Csp6I GTAC 4 cut(s) 645, 685, 701, 1160
CviQI GTAC 4 cut(s) 645, 685, 701, 1160
DdeI CTNAG 6 cut(s) 75, 450, 496, 870, 1137, 1398
DpnI GATC 5 cut(s) 213, 282, 373, 892, 1239
DpnII GATC 5 cut(s) 211, 280, 371, 890, 1237
DrdI GACNNNNNNGTC 3 cut(s) 77, 239, 326
DseDI GACNNNNNNGTC 3 cut(s) 77, 239, 326
EaeI YGGCCR 1 cut(s) 97
Eam1104I CTCTTC 3 cut(s) 41, 1098, 1446
EarI CTCTTC 3 cut(s) 41, 1098, 1446
EciI GGCGGA 1 cut(s) 1493
Ecl136II GAGCTC 1 cut(s) 511
Eco130I CCWWGG 1 cut(s) 100
Eco147I AGGCCT 1 cut(s) 464
Eco24I GRGCYC 1 cut(s) 513
Eco31I GGTCTC 2 cut(s) 167, 443
Eco32I GATATC 2 cut(s) 490, 553
Eco47I GGWCC 2 cut(s) 32, 1037
Eco47III AGCGCT 1 cut(s) 302
Eco53kI GAGCTC 1 cut(s) 511
Eco57I CTGAAG 2 cut(s) 152, 1127
Eco81I CCTNAGG 1 cut(s) 75
Eco88I CYCGRG 1 cut(s) 1196
EcoICRI GAGCTC 1 cut(s) 511
EcoRI GAATTC 1 cut(s) 1084
EcoRII CCWGG 1 cut(s) 784
EcoRV GATATC 2 cut(s) 490, 553
EcoT14I CCWWGG 1 cut(s) 100
EcoT38I GRGCYC 1 cut(s) 513
ErhI CCWWGG 1 cut(s) 100
FaqI GGGAC 1 cut(s) 309
FauI CCCGC 1 cut(s) 209
FauNDI CATATG 1 cut(s) 174
Fnu4HI GCNGC 4 cut(s) 13, 220, 256, 521
FokI GGATG 7 cut(s) 93, 113, 578, 722, 1268, 1343, 1394
FriOI GRGCYC 1 cut(s) 513
Fsp4HI GCNGC 4 cut(s) 13, 220, 256, 521
FspBI CTAG 1 cut(s) 506
GlaI GCGC 1 cut(s) 302
GluI GCNGC 4 cut(s) 13, 220, 256, 521
GsaI CCCAGC 1 cut(s) 277
GsuI CTGGAG 2 cut(s) 387, 993
HaeII RGCGCY 1 cut(s) 304
HaeIII GGCC 4 cut(s) 99, 339, 405, 464
HapII CCGG 4 cut(s) 30, 642, 1010, 1241
HgaI GACGC 2 cut(s) 15, 865
HhaI GCGC 1 cut(s) 303
Hin1I GRCGYC 1 cut(s) 26
Hin6I GCGC 1 cut(s) 301
HinP1I GCGC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 392, 1139
HinfI GANTC 6 cut(s) 286, 717, 815, 1108, 1192, 1244
HpaII CCGG 4 cut(s) 30, 642, 1010, 1241
HphI GGTGA 3 cut(s) 326, 641, 839
Hpy166II GTNNAC 3 cut(s) 1160, 1274, 1414
Hpy188I TCNGA 4 cut(s) 285, 782, 1095, 1249
Hpy188III TCNNGA 6 cut(s) 30, 659, 1040, 1169, 1196, 1241
Hpy8I GTNNAC 3 cut(s) 1160, 1274, 1414
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 4 cut(s) 176, 202, 1130, 1451
HpyCH4III ACNGT 5 cut(s) 161, 209, 323, 610, 1271
HpyCH4IV ACGT 2 cut(s) 480, 1056
HpyCH4V TGCA 3 cut(s) 178, 802, 980
HpyF10VI GCNNNNNNNGC 5 cut(s) 149, 517, 526, 587, 1484
HpyF3I CTNAG 6 cut(s) 75, 450, 496, 870, 1137, 1398
HpySE526I ACGT 2 cut(s) 480, 1056
Hsp92I GRCGYC 1 cut(s) 26
HspAI GCGC 1 cut(s) 301
Kpn2I TCCGGA 2 cut(s) 29, 1240
Kzo9I GATC 5 cut(s) 211, 280, 371, 890, 1237
LmnI GCTCC 6 cut(s) 516, 1012, 1066, 1156, 1351, 1480
Lsp1109I GCAGC 2 cut(s) 267, 532
LweI GCATC 3 cut(s) 135, 996, 1086
MaeI CTAG 1 cut(s) 506
MaeII ACGT 2 cut(s) 480, 1056
MaeIII GTNAC 5 cut(s) 476, 650, 929, 1067, 1402
MalI GATC 5 cut(s) 213, 282, 373, 892, 1239
MboI GATC 5 cut(s) 211, 280, 371, 890, 1237
MboII GAAGA 7 cut(s) 58, 329, 1010, 1115, 1220, 1229, 1463
MflI RGATCY 2 cut(s) 371, 1237
MhlI GDGCHC 1 cut(s) 513
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 7 cut(s) 16, 85, 623, 774, 881, 1084, 1344
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 1 cut(s) 1186
MmeI TCCRAC 1 cut(s) 805
Mox20I TGGCCA 1 cut(s) 99
MroI TCCGGA 2 cut(s) 29, 1240
MroXI GAANNNNTTC 1 cut(s) 1107
MscI TGGCCA 1 cut(s) 99
MseI TTAA 4 cut(s) 297, 396, 516, 846
MslI CAYNNNNRTG 3 cut(s) 131, 528, 564
Msp20I TGGCCA 1 cut(s) 99
MspCI CTTAAG 2 cut(s) 296, 515
MspI CCGG 4 cut(s) 30, 642, 1010, 1241
MspR9I CCNGG 2 cut(s) 642, 786
MvaI CCWGG 1 cut(s) 786
MvnI CGCG 1 cut(s) 204
MwoI GCNNNNNNNGC 5 cut(s) 149, 517, 526, 587, 1484
NciI CCSGG 1 cut(s) 642
NdeI CATATG 1 cut(s) 174
NdeII GATC 5 cut(s) 211, 280, 371, 890, 1237
NlaIV GGNNCC 1 cut(s) 1239
NmuCI GTSAC 1 cut(s) 650
NspI RCATGY 1 cut(s) 1151
PaeI GCATGC 1 cut(s) 1151
PceI AGGCCT 1 cut(s) 464
PcsI WCGNNNNNNNCGW 1 cut(s) 408
PdmI GAANNNNTTC 1 cut(s) 1107
PfeI GAWTC 5 cut(s) 286, 717, 815, 1108, 1244
PflFI GACNNNGTC 1 cut(s) 239
PflMI CCANNNNNTGG 1 cut(s) 426
PkrI GCNGC 4 cut(s) 14, 221, 257, 522
PleI GAGTC 1 cut(s) 1186
PpsI GAGTC 1 cut(s) 1186
Psp124BI GAGCTC 1 cut(s) 513
Psp6I CCWGG 1 cut(s) 784
PspFI CCCAGC 1 cut(s) 273
PspGI CCWGG 1 cut(s) 784
PspN4I GGNNCC 1 cut(s) 1239
PspPI GGNCC 2 cut(s) 32, 1037
PstNI CAGNNNCTG 1 cut(s) 791
PsuI RGATCY 2 cut(s) 371, 1237
PsyI GACNNNGTC 1 cut(s) 239
RsaI GTAC 4 cut(s) 646, 686, 702, 1161
RsaNI GTAC 4 cut(s) 645, 685, 701, 1160
RseI CAYNNNNRTG 3 cut(s) 131, 528, 564
SacI GAGCTC 1 cut(s) 513
SaqAI TTAA 4 cut(s) 297, 396, 516, 846
SatI GCNGC 4 cut(s) 13, 220, 256, 521
Sau3AI GATC 5 cut(s) 211, 280, 371, 890, 1237
Sau96I GGNCC 2 cut(s) 32, 1037
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 1 cut(s) 1186
ScrFI CCNGG 2 cut(s) 642, 786
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 3 cut(s) 135, 996, 1086
SinI GGWCC 2 cut(s) 32, 1037
SmiMI CAYNNNNRTG 3 cut(s) 131, 528, 564
SmlI CTYRAG 3 cut(s) 185, 296, 515
SmoI CTYRAG 3 cut(s) 185, 296, 515
SphI GCATGC 1 cut(s) 1151
Sse9I AATT 7 cut(s) 16, 85, 623, 774, 881, 1084, 1344
SseBI AGGCCT 1 cut(s) 464
SsiI CCGC 8 cut(s) 12, 130, 202, 220, 253, 678, 940, 1478
SspI AATATT 1 cut(s) 1022
SspMI CTAG 1 cut(s) 506
SstI GAGCTC 1 cut(s) 513
StuI AGGCCT 1 cut(s) 464
StyD4I CCNGG 2 cut(s) 640, 784
StyI CCWWGG 1 cut(s) 100
TaaI ACNGT 5 cut(s) 161, 209, 323, 610, 1271
TaiI ACGT 2 cut(s) 483, 1059
TaqI TCGA 2 cut(s) 543, 720
TasI AATT 7 cut(s) 16, 85, 623, 774, 881, 1084, 1344
TatI WGTACW 1 cut(s) 684
TauI GCSGC 2 cut(s) 15, 222
TfiI GAWTC 5 cut(s) 286, 717, 815, 1108, 1244
Tru1I TTAA 4 cut(s) 297, 396, 516, 846
Tru9I TTAA 4 cut(s) 297, 396, 516, 846
TscAI CASTG 2 cut(s) 711, 1425
TseFI GTSAC 1 cut(s) 650
TseI GCWGC 2 cut(s) 255, 520
Tsp45I GTSAC 1 cut(s) 650
TspDTI ATGAA 6 cut(s) 128, 608, 807, 1032, 1041, 1221
TspRI CASTG 2 cut(s) 711, 1425
Tth111I GACNNNGTC 1 cut(s) 239
Van91I CCANNNNNTGG 1 cut(s) 426
Vha464I CTTAAG 2 cut(s) 296, 515
VpaK11BI GGWCC 2 cut(s) 32, 1037
XapI RAATTY 4 cut(s) 623, 774, 881, 1084
XceI RCATGY 1 cut(s) 1151
XcmI CCANNNNNNNNNTGG 2 cut(s) 362, 563
XmnI GAANNNNTTC 1 cut(s) 1107
XspI CTAG 1 cut(s) 506
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.