Rorug06G0143000

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0006237
Physical Location & Seq
Reverse (-)
20341155 .. 20346040
4886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0143000.1

Sequence Viewer

Length: 1548 bp
ATGTTTATTGACTTTGGACTGGCAAAAGAGAGAGGTGGTGGCTGCTATCTGAGGTTTGATGACACAAATCCGGAAGCTGAAAAGAAAGAATATATTGATCATATTCAAGAGATTGTCAATTGGATGGGTTGGGAGCCCTACAAGATCACTTACACTAGTGATTACTTTCAAGATCTGTATGAATTAGCAGTGGAGCTCATACGAAGGGGTCATGCTTACGTTGATCATCAGACGGGGGATGAGATAAAGGAGTACAGGGAGAAAAAAATGAACAGCCCTTGGAGGGACAGGCCAATTAAAGAGTCGCTGAAACTTTTTGAGGATATGAGGCGAGGCCTGATTGAAGAAGGGAAGGCAACTCTAAGAATGAAACAAGACATGCAGAGCGATAATTTTAACATGTATGACCTTATTGCATATCGTATCAACTATCAAGGTAAGTTTCTACCTCAAATGTTCTTTTTGTTTACTCCTCATCCACATGCTGGAGACAGCTGGTGTATCTATCCCAGTTACGATTATGCTCACTGCATTGTGGATTCTCTTGAGAATATCACCCATTCGCTGTGCACTTTAGAATTTGAGACACGCCGTGCTTCATACTACTGGTTATTGCATTCTCTGGGCCTATATCAACCACATGTTTGGGAATATTCAAGACTGAATGTCAGTAACACTGTTATGTCGAAGCGTAAGTTAAATCGACTAGTGACTGAAAATTGGGTTGATGGTTGGGATGATCCACGCCTTATGACGCTGGCTGGTTTACGACGTAGGGGTGTGACGTCGAGTGCCATTAATACGTTTGTTAGAGGAATTGGAATCACCAGAAGTGATTGTAGTATGATTCATCTGAGTCGCCTCGAGTACCACATCAGAGAAGAGCTCAATAAAACAGCTCCTCGCACAATGGTTGTGCTTGATCCTGTAAAGGTCGTCATTACCAACTGGAAAGATGACCTCATAAAGGACTGTGAAGCAAGAAAGTGGCCCGATTCTGAGGCGGAGTCCTACAAGGTTCCATTTTCCAAGGTGTTGTACATTGAGCGCTCCGATTTTCGCCTTAAAGACTCAAAAGACTACTTCGGACTTGCTCCTGGAAAATCTGCCCTGCTTAGATACGCATGTCCTATCAGGTGTGTGGATGCAAAGGATGTTGTTTTAGCCGAGGATAATGAGACTGTCCTTGAGATACGGATCGAGTATGATCCGGAGAAGAAGACAAAGCCAAAGCGGGTGCTGCATTGGGTCGCTGAACCTTCTCCTGGGATCGATCCACTCAAAGTGGAAGTCCGATTGTTTGACAGACTATTCAATTCAGAGAATCCTGCTGAGCTTGATGACTGGCTTTCTGATTTGAATGGAAAATCGAAAGTGGTAATACCAAATGCATTTGCTGTTCCCCCGCTTGAGAAAGGTGTTGGTGTTGGTGACAAGTTTCAGTTCGAAAGACTTGGCTATTTTGTGGTCGACAAAGATTCGACTCCTGAGAAGCTTGTGTTCAATCGTACGGTCACACTGCGAGATAGCTACAAGAGTGGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

515

Amino Acids

60.24

Weight (kDa)

6.24

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1c PF00749 2 - 297 6.6e-101 tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C PF03950 300 - 403 2.2e-18 tRNA synthetases class I (E and Q), anti-codon binding domain
tRNA-synt_1c_C2 PF20974 413 - 491 1.2e-15 tRNA synthetases class I (E and Q), anti-codon binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 788
AccB7I CCANNNNNTGG 1 cut(s) 485
AccI GTMKAC 1 cut(s) 1470
AccIII TCCGGA 2 cut(s) 70, 1210
AciI CCGC 3 cut(s) 1004, 1234, 1406
AclWI GGATC 6 cut(s) 734, 917, 1202, 1205, 1268, 1277
AcsI RAATTY 1 cut(s) 578
AcyI GRCGYC 1 cut(s) 785
AdeI CACNNNGTG 1 cut(s) 593
AfaI GTAC 4 cut(s) 254, 869, 1040, 1510
AfeI AGCGCT 1 cut(s) 1049
AfiI CCNNNNNNNGG 4 cut(s) 283, 485, 967, 1265
AflIII ACRYGT 2 cut(s) 399, 640
AgsI TTSAA 7 cut(s) 107, 170, 344, 657, 1315, 1360, 1504
AhdI GACNNNNNGTC 1 cut(s) 665
AhlI ACTAGT 2 cut(s) 155, 706
AjnI CCWGG 2 cut(s) 1096, 1264
AluBI AGCT 8 cut(s) 77, 196, 495, 886, 899, 1336, 1495, 1530
AluI AGCT 8 cut(s) 77, 196, 495, 886, 899, 1336, 1495, 1530
Alw21I GWGCWC 3 cut(s) 198, 572, 888
Alw26I GTCTC 3 cut(s) 483, 578, 1172
Alw44I GTGCAC 1 cut(s) 568
AlwI GGATC 6 cut(s) 734, 917, 1202, 1205, 1268, 1277
Ama87I CYCGRG 1 cut(s) 863
Aor13HI TCCGGA 2 cut(s) 70, 1210
Aor51HI AGCGCT 1 cut(s) 1049
AoxI GGCC 4 cut(s) 290, 334, 625, 989
ApaLI GTGCAC 1 cut(s) 568
ApeKI GCWGC 2 cut(s) 42, 1240
ApoI RAATTY 1 cut(s) 578
ArsI GACNNNNNNTTYG 2 cut(s) 1275, 1307
AseI ATTAAT 1 cut(s) 798
AspLEI GCGC 1 cut(s) 1050
AspS9I GGNCC 2 cut(s) 625, 990
AsuHPI GGTGA 3 cut(s) 547, 817, 1442
AsuII TTCGAA 1 cut(s) 1446
AvaI CYCGRG 1 cut(s) 863
BaeGI GKGCMC 1 cut(s) 572
BaeI ACNNNNGTAYC 2 cut(s) 1111, 1144
BanII GRGCYC 3 cut(s) 138, 198, 888
BbsI GAAGAC 1 cut(s) 1226
Bbv12I GWGCWC 3 cut(s) 198, 572, 888
BbvI GCAGC 2 cut(s) 29, 1227
BccI CCATC 2 cut(s) 118, 722
BceAI ACGGC 1 cut(s) 576
BciT130I CCWGG 2 cut(s) 1098, 1266
BclI TGATCA 2 cut(s) 97, 223
BcoDI GTCTC 3 cut(s) 483, 578, 1172
BcuI ACTAGT 2 cut(s) 155, 706
BfaI CTAG 2 cut(s) 156, 707
BfoI RGCGCY 1 cut(s) 1051
BglII AGATCT 1 cut(s) 172
BisI GCNGC 2 cut(s) 43, 1241
BlpI GCTNAGC 1 cut(s) 1332
BlsI GCNGC 2 cut(s) 44, 1242
Bme1390I CCNGG 2 cut(s) 1098, 1266
BmeRI GACNNNNNGTC 1 cut(s) 665
BmeT110I CYCGRG 1 cut(s) 863
BmgT120I GGNCC 2 cut(s) 625, 990
BmiI GGNNCC 2 cut(s) 135, 1020
BmrFI CCNGG 2 cut(s) 1098, 1266
BmrI ACTGGG 1 cut(s) 504
BmsI GCATC 1 cut(s) 1135
BmuI ACTGGG 1 cut(s) 504
BpiI GAAGAC 1 cut(s) 1226
BplI GAGNNNNNCTC 2 cut(s) 870, 902
BpmI CTGGAG 1 cut(s) 507
Bpu1102I GCTNAGC 1 cut(s) 1332
Bpu14I TTCGAA 1 cut(s) 1446
BpuEI CTTGAG 3 cut(s) 566, 1208, 1430
Bsa29I ATCGAT 1 cut(s) 1272
BsaBI GATNNNNATC 1 cut(s) 1196
BsaHI GRCGYC 1 cut(s) 785
BsaJI CCNNGG 4 cut(s) 278, 1029, 1167, 1265
BsaWI WCCGGW 2 cut(s) 70, 1210
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 485, 967, 1265
Bse1I ACTGG 5 cut(s) 24, 510, 611, 953, 1349
Bse8I GATNNNNATC 1 cut(s) 1196
BseAI TCCGGA 2 cut(s) 70, 1210
BseBI CCWGG 2 cut(s) 1098, 1266
BseCI ATCGAT 1 cut(s) 1272
BseDI CCNNGG 4 cut(s) 278, 1029, 1167, 1265
BseGI GGATG 6 cut(s) 129, 244, 475, 742, 1150, 1159
BseJI GATNNNNATC 1 cut(s) 1196
BseLI CCNNNNNNNGG 4 cut(s) 283, 485, 967, 1265
BseMII CTCAG 5 cut(s) 41, 845, 990, 1323, 1479
BseNI ACTGG 5 cut(s) 24, 510, 611, 953, 1349
BseRI GAGGAG 2 cut(s) 462, 891
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 2 cut(s) 29, 1227
BshFI GGCC 4 cut(s) 292, 336, 627, 991
BshVI ATCGAT 1 cut(s) 1272
BsiHKAI GWGCWC 3 cut(s) 198, 572, 888
BsiHKCI CYCGRG 1 cut(s) 863
BsiSI CCGG 2 cut(s) 71, 1211
BsiWI CGTACG 1 cut(s) 1508
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 4 cut(s) 283, 485, 967, 1265
BsmAI GTCTC 3 cut(s) 483, 578, 1172
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 1 cut(s) 616
BsnI GGCC 4 cut(s) 292, 336, 627, 991
BsoBI CYCGRG 1 cut(s) 863
Bsp119I TTCGAA 1 cut(s) 1446
Bsp1286I GDGCHC 4 cut(s) 138, 198, 572, 888
Bsp13I TCCGGA 2 cut(s) 70, 1210
Bsp1407I TGTACA 1 cut(s) 1038
Bsp1720I GCTNAGC 1 cut(s) 1332
BspACI CCGC 3 cut(s) 1004, 1234, 1406
BspANI GGCC 4 cut(s) 292, 336, 627, 991
BspCNI CTCAG 5 cut(s) 42, 846, 991, 1324, 1480
BspDI ATCGAT 1 cut(s) 1272
BspEI TCCGGA 2 cut(s) 70, 1210
BspLI GGNNCC 2 cut(s) 135, 1020
BspPI GGATC 6 cut(s) 734, 917, 1202, 1205, 1268, 1277
BspQI GCTCTTC 1 cut(s) 876
BspT104I TTCGAA 1 cut(s) 1446
BsrGI TGTACA 1 cut(s) 1038
BsrI ACTGG 5 cut(s) 24, 510, 611, 953, 1349
BssECI CCNNGG 4 cut(s) 278, 1029, 1167, 1265
BssNI GRCGYC 1 cut(s) 785
BssT1I CCWWGG 2 cut(s) 278, 1029
Bst2UI CCWGG 2 cut(s) 1098, 1266
Bst4CI ACNGT 4 cut(s) 679, 974, 1183, 1513
Bst6I CTCTTC 1 cut(s) 876
BstACI GRCGYC 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 1038
BstBI TTCGAA 1 cut(s) 1446
BstC8I GCNNGC 1 cut(s) 759
BstDEI CTNAG 7 cut(s) 50, 362, 854, 999, 1115, 1332, 1488
BstENI CCTNNNNNAGG 1 cut(s) 965
BstF5I GGATG 6 cut(s) 129, 244, 475, 742, 1150, 1159
BstH2I RGCGCY 1 cut(s) 1051
BstHHI GCGC 1 cut(s) 1050
BstMAI GTCTC 3 cut(s) 483, 578, 1172
BstMWI GCNNNNNNNGC 1 cut(s) 1240
BstNI CCWGG 2 cut(s) 1098, 1266
BstNSI RCATGY 5 cut(s) 382, 403, 485, 644, 1128
BstSCI CCNGG 2 cut(s) 1096, 1264
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 2 cut(s) 29, 1227
BstV2I GAAGAC 1 cut(s) 1226
BstX2I RGATCY 1 cut(s) 172
BstXI CCANNNNNNTGG 1 cut(s) 645
BstYI RGATCY 1 cut(s) 172
Bsu15I ATCGAT 1 cut(s) 1272
BsuRI GGCC 4 cut(s) 292, 336, 627, 991
BsuTUI ATCGAT 1 cut(s) 1272
BtsCI GGATG 6 cut(s) 129, 244, 475, 742, 1150, 1159
BtsI GCAGTG 3 cut(s) 195, 526, 1517
BtsIMutI CAGTG 4 cut(s) 195, 526, 675, 1517
Cac8I GCNNGC 1 cut(s) 759
CfoI GCGC 1 cut(s) 1050
Cfr13I GGNCC 2 cut(s) 625, 990
ClaI ATCGAT 1 cut(s) 1272
CseI GACGC 1 cut(s) 763
Csp6I GTAC 4 cut(s) 253, 868, 1039, 1509
CviAII CATG 6 cut(s) 212, 379, 400, 482, 641, 1125
CviQI GTAC 4 cut(s) 253, 868, 1039, 1509
DdeI CTNAG 7 cut(s) 50, 362, 854, 999, 1115, 1332, 1488
DraIII CACNNNGTG 1 cut(s) 593
DriI GACNNNNNGTC 1 cut(s) 665
Eam1104I CTCTTC 1 cut(s) 876
Eam1105I GACNNNNNGTC 1 cut(s) 665
EarI CTCTTC 1 cut(s) 876
EciI GGCGGA 1 cut(s) 1019
Ecl136II GAGCTC 2 cut(s) 196, 886
Eco130I CCWWGG 2 cut(s) 278, 1029
Eco147I AGGCCT 1 cut(s) 336
Eco24I GRGCYC 3 cut(s) 138, 198, 888
Eco47III AGCGCT 1 cut(s) 1049
Eco53kI GAGCTC 2 cut(s) 196, 886
Eco88I CYCGRG 1 cut(s) 863
EcoICRI GAGCTC 2 cut(s) 196, 886
EcoNI CCTNNNNNAGG 1 cut(s) 965
EcoRII CCWGG 2 cut(s) 1096, 1264
EcoT14I CCWWGG 2 cut(s) 278, 1029
EcoT22I ATGCAT 1 cut(s) 1393
EcoT38I GRGCYC 3 cut(s) 138, 198, 888
ErhI CCWWGG 2 cut(s) 278, 1029
FaeI CATG 6 cut(s) 215, 382, 403, 485, 644, 1128
FaqI GGGAC 1 cut(s) 299
FatI CATG 6 cut(s) 211, 378, 399, 481, 640, 1124
FauI CCCGC 2 cut(s) 1227, 1413
FbaI TGATCA 2 cut(s) 97, 223
FblI GTMKAC 1 cut(s) 1470
Fnu4HI GCNGC 2 cut(s) 43, 1241
FokI GGATG 6 cut(s) 136, 251, 462, 749, 1157, 1166
FriOI GRGCYC 3 cut(s) 138, 198, 888
Fsp4HI GCNGC 2 cut(s) 43, 1241
FspBI CTAG 2 cut(s) 156, 707
GlaI GCGC 1 cut(s) 1049
GluI GCNGC 2 cut(s) 43, 1241
GsuI CTGGAG 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 1051
HaeIII GGCC 4 cut(s) 292, 336, 627, 991
HapII CCGG 2 cut(s) 71, 1211
HgaI GACGC 1 cut(s) 763
HhaI GCGC 1 cut(s) 1050
Hin1I GRCGYC 1 cut(s) 785
Hin1II CATG 6 cut(s) 215, 382, 403, 485, 644, 1128
Hin6I GCGC 1 cut(s) 1048
HinP1I GCGC 1 cut(s) 1048
HincII GTYRAC 1 cut(s) 1471
HindII GTYRAC 1 cut(s) 1471
HindIII AAGCTT 1 cut(s) 1493
HpaII CCGG 2 cut(s) 71, 1211
HphI GGTGA 3 cut(s) 547, 817, 1442
Hpy166II GTNNAC 4 cut(s) 468, 570, 767, 1471
Hpy188III TCNNGA 7 cut(s) 71, 107, 170, 545, 657, 1211, 1487
Hpy8I GTNNAC 4 cut(s) 468, 570, 767, 1471
Hpy99I CGWCG 2 cut(s) 774, 790
HpyAV CCTTC 4 cut(s) 198, 341, 346, 1269
HpyCH4III ACNGT 4 cut(s) 679, 974, 1183, 1513
HpyCH4IV ACGT 4 cut(s) 219, 772, 785, 803
HpyCH4V TGCA 8 cut(s) 382, 416, 531, 570, 616, 1148, 1243, 1391
HpyF10VI GCNNNNNNNGC 1 cut(s) 1240
HpyF3I CTNAG 7 cut(s) 50, 362, 854, 999, 1115, 1332, 1488
HpySE526I ACGT 4 cut(s) 219, 772, 785, 803
Hsp92I GRCGYC 1 cut(s) 785
Hsp92II CATG 6 cut(s) 215, 382, 403, 485, 644, 1128
HspAI GCGC 1 cut(s) 1048
Kpn2I TCCGGA 2 cut(s) 70, 1210
Ksp22I TGATCA 2 cut(s) 97, 223
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 5 cut(s) 133, 193, 904, 1055, 1099
Lsp1109I GCAGC 2 cut(s) 29, 1227
LweI GCATC 1 cut(s) 1135
MaeI CTAG 2 cut(s) 156, 707
MaeII ACGT 4 cut(s) 219, 772, 785, 803
MaeIII GTNAC 6 cut(s) 512, 671, 709, 781, 1430, 1513
MboII GAAGA 4 cut(s) 356, 893, 1228, 1231
MfeI CAATTG 1 cut(s) 118
MflI RGATCY 1 cut(s) 172
MhlI GDGCHC 4 cut(s) 138, 198, 572, 888
MluCI AATT 8 cut(s) 118, 182, 294, 391, 578, 718, 816, 1315
MlyI GAGTC 5 cut(s) 311, 865, 1016, 1064, 1477
Mph1103I ATGCAT 1 cut(s) 1393
MroI TCCGGA 2 cut(s) 70, 1210
MseI TTAA 5 cut(s) 297, 396, 698, 798, 1065
MslI CAYNNNNRTG 2 cut(s) 480, 680
MspA1I CMGCKG 1 cut(s) 495
MspI CCGG 2 cut(s) 71, 1211
MspR9I CCNGG 2 cut(s) 1098, 1266
MunI CAATTG 1 cut(s) 118
Mva1269I GAATGC 1 cut(s) 616
MvaI CCWGG 2 cut(s) 1098, 1266
MwoI GCNNNNNNNGC 1 cut(s) 1240
NlaIII CATG 6 cut(s) 215, 382, 403, 485, 644, 1128
NlaIV GGNNCC 2 cut(s) 135, 1020
NmeAIII GCCGAG 1 cut(s) 1192
NmuCI GTSAC 4 cut(s) 709, 781, 1430, 1513
NsiI ATGCAT 1 cut(s) 1393
NspI RCATGY 5 cut(s) 382, 403, 485, 644, 1128
NspV TTCGAA 1 cut(s) 1446
PaeR7I CTCGAG 1 cut(s) 863
PceI AGGCCT 1 cut(s) 336
PciI ACATGT 2 cut(s) 399, 640
PciSI GCTCTTC 1 cut(s) 876
PctI GAATGC 1 cut(s) 616
PfeI GAWTC 6 cut(s) 539, 822, 847, 995, 1324, 1478
Pfl23II CGTACG 1 cut(s) 1508
PflMI CCANNNNNTGG 1 cut(s) 485
PfoI TCCNGGA 1 cut(s) 1096
PkrI GCNGC 2 cut(s) 44, 1242
PleI GAGTC 5 cut(s) 310, 864, 1015, 1064, 1477
PpsI GAGTC 5 cut(s) 310, 864, 1015, 1064, 1477
PscI ACATGT 2 cut(s) 399, 640
PshBI ATTAAT 1 cut(s) 798
Psp124BI GAGCTC 2 cut(s) 198, 888
Psp6I CCWGG 2 cut(s) 1096, 1264
PspGI CCWGG 2 cut(s) 1096, 1264
PspLI CGTACG 1 cut(s) 1508
PspN4I GGNNCC 2 cut(s) 135, 1020
PspPI GGNCC 2 cut(s) 625, 990
PspXI VCTCGAGB 1 cut(s) 863
PsuI RGATCY 1 cut(s) 172
PvuII CAGCTG 1 cut(s) 495
RsaI GTAC 4 cut(s) 254, 869, 1040, 1510
RsaNI GTAC 4 cut(s) 253, 868, 1039, 1509
RseI CAYNNNNRTG 2 cut(s) 480, 680
SacI GAGCTC 2 cut(s) 198, 888
SalI GTCGAC 1 cut(s) 1469
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 5 cut(s) 297, 396, 698, 798, 1065
SatI GCNGC 2 cut(s) 43, 1241
Sau96I GGNCC 2 cut(s) 625, 990
SchI GAGTC 5 cut(s) 311, 865, 1016, 1064, 1477
ScrFI CCNGG 2 cut(s) 1098, 1266
SduI GDGCHC 4 cut(s) 138, 198, 572, 888
SfaNI GCATC 1 cut(s) 1135
Sfr274I CTCGAG 1 cut(s) 863
SfuI TTCGAA 1 cut(s) 1446
SlaI CTCGAG 1 cut(s) 863
SmiMI CAYNNNNRTG 2 cut(s) 480, 680
SmlI CTYRAG 4 cut(s) 545, 863, 1187, 1409
SmoI CTYRAG 4 cut(s) 545, 863, 1187, 1409
SpeI ACTAGT 2 cut(s) 155, 706
Sse9I AATT 8 cut(s) 118, 182, 294, 391, 578, 718, 816, 1315
SseBI AGGCCT 1 cut(s) 336
SsiI CCGC 3 cut(s) 1004, 1234, 1406
SspI AATATT 1 cut(s) 653
SspMI CTAG 2 cut(s) 156, 707
SstI GAGCTC 2 cut(s) 198, 888
StuI AGGCCT 1 cut(s) 336
StyD4I CCNGG 2 cut(s) 1096, 1264
StyI CCWWGG 2 cut(s) 278, 1029
TaaI ACNGT 4 cut(s) 679, 974, 1183, 1513
TaiI ACGT 4 cut(s) 222, 775, 788, 806
TasI AATT 8 cut(s) 118, 182, 294, 391, 578, 718, 816, 1315
TatI WGTACW 2 cut(s) 252, 1038
TfiI GAWTC 6 cut(s) 539, 822, 847, 995, 1324, 1478
Tru1I TTAA 5 cut(s) 297, 396, 698, 798, 1065
Tru9I TTAA 5 cut(s) 297, 396, 698, 798, 1065
TscAI CASTG 4 cut(s) 195, 533, 682, 1524
TseFI GTSAC 4 cut(s) 709, 781, 1430, 1513
TseI GCWGC 2 cut(s) 42, 1240
Tsp45I GTSAC 4 cut(s) 709, 781, 1430, 1513
TspDTI ATGAA 5 cut(s) 195, 284, 383, 588, 839
TspGWI ACGGA 1 cut(s) 1210
TspRI CASTG 4 cut(s) 195, 533, 682, 1524
Van91I CCANNNNNTGG 1 cut(s) 485
VneI GTGCAC 1 cut(s) 568
VspI ATTAAT 1 cut(s) 798
XagI CCTNNNNNAGG 1 cut(s) 965
XapI RAATTY 1 cut(s) 578
XceI RCATGY 5 cut(s) 382, 403, 485, 644, 1128
XhoI CTCGAG 1 cut(s) 863
XmiI GTMKAC 1 cut(s) 1470
XspI CTAG 2 cut(s) 156, 707
ZraI GACGTC 1 cut(s) 786
Zsp2I ATGCAT 1 cut(s) 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.