Rh6CG257800

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0006237
Physical Location & Seq
Forward (+)
42993466 .. 42996681
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG257800.1

Sequence Viewer

Length: 1353 bp
ATGGACACCGGCGGCAACTCGCTGGCGTCGGGTCCCGACGGCGTGAAGCGCAAAGTGAGCTACTTCTACGACCCGGAAGTGGGAAATTACTATTATGGGCAGGGCCATCCGATGAAGCCCCACCGCATCAGAATGACCCACGCCCTTTTAGCCCATTACGGTCTTCTCCAGCACATGCAGGTCCTCAAACCCTACCCGGCCCGGGACCGGGACCTCTGCCGCTTCCACGCCGACGACTACGTGGCGTTTCTCCGGAGCATTACCCCCGAAACGCAGCAGGACCAGCTGAGGCAGCTCAAGAGGTTCAATGTGGGAGAGGATTGCCCTGTGTTTGATGGGTTGTACTCGTTTTGTCAGACTTATGCCGGTGGGTCTGTTGGTGGGGCTGTCAAGCTGAATCATGGGATTTGCGACATTTCGATTAATTGGGCTGGGGGGTTGCACCACGCTAAGAAGTGTGAAGCTTCTGGGTTTTGTTATGTCAATGACATTGTGCTCGCAATCTTGGAGCTGCTTAAACAACACGAGAGAGTTTTGTATGTGGACATTGATATCCACCACGGGGACGGTGTTGAGGAGGCGTTTTACACAACAGACAGGGTCATGACGGTTTCGTTTCATAAATTTGGAGACTATTTTCCGGGGACGGGGGACATTCGCGATATTGGGTACGGGAAAGGGAAGTATTACTCCCTCAATGTTCCATTAGATGATGGAATTGATGATGAGAGCTACCATTACTTGTTCAAACCCCTCATTGGGAAGGTTATGGAGATATTTAGGCCTGGTGCTGTTGTTCTACAGTGTGGTGCTGATTCCTTATCTGGGGATAGGCTTGGTTGCTTTAATCTTTCCATCAAGGGTCATGCTGAATGTGTTAAATACATGAGATCCTTCAATGTCCCGCTTTTGCTTCTAGGCGGTGGCGGGTATACTATTCGCAATGTTGCTCGTTGCTGGTGCTACGAGACTGGTGTTGCACTTGGAGCAGAAATTGAGGACAAAATGCCACAGCATGAGTATTATGAGTATTTTGGTCCAGACTATACTCTTCATGTTGCCCCTAGTAATATGGAAAACAAGAATTCTCATCAGTTACTGGAAGAAATACGATCGAAACTTCTTGAAAATCTCTCCAGGCTTCAGCATGCACCTAGTGTCCAATTTCATGAAAGGCCTCCTGAAAATGAGCTTCCAGAGAAAGGAGCTGTAGAGAATTCTAGAGGCTATGATGCAGGACTGGATGAAATTACAACAAGCGCAAAGGCTTTGGATATGGGCTCTGGGTCTATGGAGGAACCAAGTGTAAAAGTTGAACAAGAGTCTCTGAATAAGCCTGCAGATCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

450

Amino Acids

50.42

Weight (kDa)

5.59

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 324 2.4e-87 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 932
AccII CGCG 1 cut(s) 660
AccIII TCCGGA 1 cut(s) 252
AciI CCGC 6 cut(s) 12, 124, 220, 905, 921, 927
AclWI GGATC 1 cut(s) 885
AcsI RAATTY 3 cut(s) 623, 1084, 1216
AcuI CTGAAG 1 cut(s) 1127
AcyI GRCGYC 1 cut(s) 26
AdeI CACNNNGTG 1 cut(s) 1157
AfaI GTAC 2 cut(s) 344, 671
AgsI TTSAA 5 cut(s) 307, 748, 898, 1127, 1316
AjnI CCWGG 2 cut(s) 784, 1136
AluBI AGCT 9 cut(s) 60, 286, 295, 394, 464, 511, 732, 1192, 1208
AluI AGCT 9 cut(s) 60, 286, 295, 394, 464, 511, 732, 1192, 1208
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 3 cut(s) 624, 962, 1329
AlwI GGATC 1 cut(s) 885
AlwNI CAGNNNCTG 1 cut(s) 1099
Ama87I CYCGRG 1 cut(s) 201
Aor13HI TCCGGA 1 cut(s) 252
AoxI GGCC 4 cut(s) 103, 198, 782, 1175
ApeKI GCWGC 3 cut(s) 274, 292, 511
ApoI RAATTY 3 cut(s) 623, 1084, 1216
AseI ATTAAT 1 cut(s) 423
AspLEI GCGC 2 cut(s) 51, 1262
AspS9I GGNCC 8 cut(s) 32, 103, 181, 199, 205, 211, 280, 1037
AsuC2I CCSGG 6 cut(s) 74, 197, 202, 203, 209, 642
AvaI CYCGRG 1 cut(s) 201
AvaII GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1037
BanII GRGCYC 1 cut(s) 1283
BauI CACGAG 1 cut(s) 524
BbsI GAAGAC 1 cut(s) 155
Bbv12I GWGCWC 1 cut(s) 498
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 3 cut(s) 286, 304, 498
BccI CCATC 4 cut(s) 114, 329, 707, 863
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 2 cut(s) 786, 1138
BcnI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 642
BcoDI GTCTC 3 cut(s) 624, 962, 1329
BfaI CTAG 4 cut(s) 917, 1065, 1155, 1221
BfmI CTRYAG 3 cut(s) 800, 1209, 1338
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 5 cut(s) 13, 220, 275, 293, 512
BlsI GCNGC 5 cut(s) 14, 221, 276, 294, 513
Bme1390I CCNGG 8 cut(s) 74, 197, 202, 203, 209, 642, 786, 1138
Bme18I GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1037
BmeT110I CYCGRG 1 cut(s) 201
BmgT120I GGNCC 8 cut(s) 32, 103, 181, 199, 205, 211, 280, 1037
BmiI GGNNCC 5 cut(s) 33, 34, 206, 212, 1299
BmrFI CCNGG 8 cut(s) 74, 197, 202, 203, 209, 642, 786, 1138
BmsI GCATC 2 cut(s) 135, 1222
BpiI GAAGAC 1 cut(s) 155
BpmI CTGGAG 2 cut(s) 152, 1120
Bpu10I CCTNAGC 1 cut(s) 287
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 642
BsaAI YACGTR 1 cut(s) 241
BsaHI GRCGYC 1 cut(s) 26
BsaJI CCNNGG 3 cut(s) 201, 559, 641
BsaWI WCCGGW 1 cut(s) 252
Bse118I RCCGGY 2 cut(s) 8, 365
Bse1I ACTGG 3 cut(s) 976, 1104, 1245
Bse3DI GCAATG 1 cut(s) 949
BseAI TCCGGA 1 cut(s) 252
BseBI CCWGG 2 cut(s) 786, 1138
BseDI CCNNGG 3 cut(s) 201, 559, 641
BseGI GGATG 2 cut(s) 106, 1249
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 1 cut(s) 278
BseNI ACTGG 3 cut(s) 976, 1104, 1245
BseRI GAGGAG 1 cut(s) 590
BseXI GCAGC 3 cut(s) 286, 304, 498
BseYI CCCAGC 1 cut(s) 431
Bsh1236I CGCG 1 cut(s) 660
Bsh1285I CGRYCG 1 cut(s) 1115
BshFI GGCC 4 cut(s) 105, 200, 784, 1177
BsiEI CGRYCG 1 cut(s) 1115
BsiHKAI GWGCWC 1 cut(s) 498
BsiHKCI CYCGRG 1 cut(s) 201
BsiSI CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 641
BslFI GGGAC 7 cut(s) 18, 218, 224, 578, 658, 665, 887
BsmAI GTCTC 3 cut(s) 624, 962, 1329
BsmFI GGGAC 7 cut(s) 18, 218, 224, 578, 658, 665, 887
BsnI GGCC 4 cut(s) 105, 200, 784, 1177
BsoBI CYCGRG 1 cut(s) 201
Bsp1286I GDGCHC 2 cut(s) 498, 1283
Bsp13I TCCGGA 1 cut(s) 252
Bsp143I GATC 3 cut(s) 890, 1112, 1342
Bsp68I TCGCGA 1 cut(s) 660
BspACI CCGC 6 cut(s) 12, 124, 220, 905, 921, 927
BspANI GGCC 4 cut(s) 105, 200, 784, 1177
BspCNI CTCAG 1 cut(s) 279
BspEI TCCGGA 1 cut(s) 252
BspFNI CGCG 1 cut(s) 660
BspHI TCATGA 2 cut(s) 603, 1168
BspLI GGNNCC 5 cut(s) 33, 34, 206, 212, 1299
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 1 cut(s) 885
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 2 cut(s) 8, 365
BsrI ACTGG 3 cut(s) 976, 1104, 1245
BssAI RCCGGY 2 cut(s) 8, 365
BssECI CCNNGG 3 cut(s) 201, 559, 641
BssMI GATC 3 cut(s) 890, 1112, 1342
BssNAI GTATAC 1 cut(s) 933
BssNI GRCGYC 1 cut(s) 26
BssSI CACGAG 1 cut(s) 524
Bst1107I GTATAC 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 524
Bst2UI CCWGG 2 cut(s) 786, 1138
Bst4CI ACNGT 4 cut(s) 161, 569, 610, 804
Bst6I CTCTTC 1 cut(s) 1056
BstACI GRCGYC 1 cut(s) 26
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 4 cut(s) 24, 498, 1149, 1338
BstDEI CTNAG 2 cut(s) 287, 450
BstDSI CCRYGG 1 cut(s) 559
BstF5I GGATG 2 cut(s) 106, 1249
BstFNI CGCG 1 cut(s) 660
BstHHI GCGC 2 cut(s) 51, 1262
BstKTI GATC 3 cut(s) 893, 1115, 1345
BstMAI GTCTC 3 cut(s) 624, 962, 1329
BstMBI GATC 3 cut(s) 890, 1112, 1342
BstMCI CGRYCG 1 cut(s) 1115
BstMWI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 986
BstNI CCWGG 2 cut(s) 786, 1138
BstNSI RCATGY 2 cut(s) 178, 1151
BstSCI CCNGG 8 cut(s) 72, 195, 200, 201, 207, 640, 784, 1136
BstSFI CTRYAG 3 cut(s) 800, 1209, 1338
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 3 cut(s) 286, 304, 498
BstV2I GAAGAC 1 cut(s) 155
BstX2I RGATCY 1 cut(s) 890
BstYI RGATCY 1 cut(s) 890
BstZ17I GTATAC 1 cut(s) 933
BsuRI GGCC 4 cut(s) 105, 200, 784, 1177
BtgI CCRYGG 1 cut(s) 559
BtsCI GGATG 2 cut(s) 106, 1249
BtsIMutI CAGTG 1 cut(s) 809
BtuMI TCGCGA 1 cut(s) 660
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 24, 498, 1149, 1338
CaiI CAGNNNCTG 1 cut(s) 1099
CciI TCATGA 2 cut(s) 603, 1168
CfoI GCGC 2 cut(s) 51, 1262
Cfr10I RCCGGY 2 cut(s) 8, 365
Cfr13I GGNCC 8 cut(s) 32, 103, 181, 199, 205, 211, 280, 1037
Cfr9I CCCGGG 1 cut(s) 201
CseI GACGC 1 cut(s) 15
Csp6I GTAC 2 cut(s) 343, 670
CviAII CATG 9 cut(s) 175, 401, 604, 866, 886, 1016, 1055, 1148, 1169
CviQI GTAC 2 cut(s) 343, 670
DdeI CTNAG 2 cut(s) 287, 450
DpnI GATC 3 cut(s) 892, 1114, 1344
DpnII GATC 3 cut(s) 890, 1112, 1342
DraIII CACNNNGTG 1 cut(s) 1157
Eam1104I CTCTTC 1 cut(s) 1056
EarI CTCTTC 1 cut(s) 1056
Eco147I AGGCCT 2 cut(s) 784, 1177
Eco24I GRGCYC 1 cut(s) 1283
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1037
Eco57I CTGAAG 1 cut(s) 1127
Eco88I CYCGRG 1 cut(s) 201
EcoO109I RGGNCCY 3 cut(s) 32, 181, 211
EcoRI GAATTC 2 cut(s) 1084, 1216
EcoRII CCWGG 2 cut(s) 784, 1136
EcoRV GATATC 1 cut(s) 553
EcoT38I GRGCYC 1 cut(s) 1283
FaeI CATG 9 cut(s) 178, 404, 607, 869, 889, 1019, 1058, 1151, 1172
FaqI GGGAC 7 cut(s) 18, 218, 224, 578, 658, 665, 887
FatI CATG 9 cut(s) 174, 400, 603, 865, 885, 1015, 1054, 1147, 1168
FauI CCCGC 2 cut(s) 912, 920
FblI GTMKAC 1 cut(s) 932
Fnu4HI GCNGC 5 cut(s) 13, 220, 275, 293, 512
FokI GGATG 2 cut(s) 93, 1256
FriOI GRGCYC 1 cut(s) 1283
Fsp4HI GCNGC 5 cut(s) 13, 220, 275, 293, 512
FspBI CTAG 4 cut(s) 917, 1065, 1155, 1221
GlaI GCGC 2 cut(s) 50, 1261
GluI GCNGC 5 cut(s) 13, 220, 275, 293, 512
GsaI CCCAGC 1 cut(s) 435
GsuI CTGGAG 2 cut(s) 152, 1120
HaeIII GGCC 4 cut(s) 105, 200, 784, 1177
HapII CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 641
HgaI GACGC 1 cut(s) 15
HhaI GCGC 2 cut(s) 51, 1262
Hin1I GRCGYC 1 cut(s) 26
Hin1II CATG 9 cut(s) 178, 404, 607, 869, 889, 1019, 1058, 1151, 1172
Hin6I GCGC 2 cut(s) 49, 1260
HinP1I GCGC 2 cut(s) 49, 1260
HindIII AAGCTT 1 cut(s) 462
HinfI GANTC 3 cut(s) 397, 815, 1322
HpaII CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 641
Hpy166II GTNNAC 2 cut(s) 544, 933
Hpy188I TCNGA 5 cut(s) 111, 131, 357, 1329, 1347
Hpy8I GTNNAC 2 cut(s) 544, 933
Hpy99I CGWCG 3 cut(s) 31, 41, 236
HpyAV CCTTC 2 cut(s) 757, 904
HpyCH4III ACNGT 4 cut(s) 161, 569, 610, 804
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 6 cut(s) 178, 442, 980, 1151, 1235, 1340
HpyF10VI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 986
HpyF3I CTNAG 2 cut(s) 287, 450
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 26
Hsp92II CATG 9 cut(s) 178, 404, 607, 869, 889, 1019, 1058, 1151, 1172
HspAI GCGC 2 cut(s) 49, 1260
KflI GGGWCCC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 252
Kzo9I GATC 3 cut(s) 890, 1112, 1342
LmnI GCTCC 4 cut(s) 255, 508, 986, 1205
Lsp1109I GCAGC 3 cut(s) 286, 304, 498
LweI GCATC 2 cut(s) 135, 1222
MaeI CTAG 4 cut(s) 917, 1065, 1155, 1221
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 1 cut(s) 1095
MalI GATC 3 cut(s) 892, 1114, 1344
MboI GATC 3 cut(s) 890, 1112, 1342
MboII GAAGA 3 cut(s) 155, 1043, 1115
MflI RGATCY 1 cut(s) 890
MhlI GDGCHC 2 cut(s) 498, 1283
MluCI AATT 9 cut(s) 85, 424, 623, 717, 993, 1084, 1163, 1216, 1248
MlyI GAGTC 1 cut(s) 1331
MroI TCCGGA 1 cut(s) 252
MseI TTAA 4 cut(s) 423, 516, 846, 879
MslI CAYNNNNRTG 1 cut(s) 131
MspA1I CMGCKG 1 cut(s) 286
MspI CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 641
MspR9I CCNGG 8 cut(s) 74, 197, 202, 203, 209, 642, 786, 1138
MvaI CCWGG 2 cut(s) 786, 1138
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 986
NciI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 642
NdeII GATC 3 cut(s) 890, 1112, 1342
NlaIII CATG 9 cut(s) 178, 404, 607, 869, 889, 1019, 1058, 1151, 1172
NlaIV GGNNCC 5 cut(s) 33, 34, 206, 212, 1299
NruI TCGCGA 1 cut(s) 660
NspI RCATGY 2 cut(s) 178, 1151
PaeI GCATGC 1 cut(s) 1151
PagI TCATGA 2 cut(s) 603, 1168
PceI AGGCCT 2 cut(s) 784, 1177
PfeI GAWTC 2 cut(s) 397, 815
PflFI GACNNNGTC 1 cut(s) 599
PkrI GCNGC 5 cut(s) 14, 221, 276, 294, 513
Ple19I CGATCG 1 cut(s) 1115
PleI GAGTC 1 cut(s) 1330
PpsI GAGTC 1 cut(s) 1330
Ppu21I YACGTR 1 cut(s) 241
PpuMI RGGWCCY 3 cut(s) 32, 181, 211
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 3 cut(s) 32, 181, 211
Psp6I CCWGG 2 cut(s) 784, 1136
PspFI CCCAGC 1 cut(s) 431
PspGI CCWGG 2 cut(s) 784, 1136
PspN4I GGNNCC 5 cut(s) 33, 34, 206, 212, 1299
PspPI GGNCC 8 cut(s) 32, 103, 181, 199, 205, 211, 280, 1037
PspPPI RGGWCCY 3 cut(s) 32, 181, 211
PstI CTGCAG 1 cut(s) 1342
PstNI CAGNNNCTG 1 cut(s) 1099
PsuI RGATCY 1 cut(s) 890
PsyI GACNNNGTC 1 cut(s) 599
PvuI CGATCG 1 cut(s) 1115
PvuII CAGCTG 1 cut(s) 286
RruI TCGCGA 1 cut(s) 660
RsaI GTAC 2 cut(s) 344, 671
RsaNI GTAC 2 cut(s) 343, 670
RseI CAYNNNNRTG 1 cut(s) 131
SaqAI TTAA 4 cut(s) 423, 516, 846, 879
SatI GCNGC 5 cut(s) 13, 220, 275, 293, 512
Sau3AI GATC 3 cut(s) 890, 1112, 1342
Sau96I GGNCC 8 cut(s) 32, 103, 181, 199, 205, 211, 280, 1037
SchI GAGTC 1 cut(s) 1331
ScrFI CCNGG 8 cut(s) 74, 197, 202, 203, 209, 642, 786, 1138
SduI GDGCHC 2 cut(s) 498, 1283
SfaNI GCATC 2 cut(s) 135, 1222
SfcI CTRYAG 3 cut(s) 800, 1209, 1338
SgrAI CRCCGGYG 1 cut(s) 8
SinI GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1037
SmaI CCCGGG 1 cut(s) 203
SmiMI CAYNNNNRTG 1 cut(s) 131
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
SphI GCATGC 1 cut(s) 1151
Sse9I AATT 9 cut(s) 85, 424, 623, 717, 993, 1084, 1163, 1216, 1248
SseBI AGGCCT 2 cut(s) 784, 1177
SsiI CCGC 6 cut(s) 12, 124, 220, 905, 921, 927
SspMI CTAG 4 cut(s) 917, 1065, 1155, 1221
StuI AGGCCT 2 cut(s) 784, 1177
StyD4I CCNGG 8 cut(s) 72, 195, 200, 201, 207, 640, 784, 1136
TaaI ACNGT 4 cut(s) 161, 569, 610, 804
TaiI ACGT 1 cut(s) 243
TaqI TCGA 2 cut(s) 419, 1115
TasI AATT 9 cut(s) 85, 424, 623, 717, 993, 1084, 1163, 1216, 1248
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 15, 222
TfiI GAWTC 2 cut(s) 397, 815
Tru1I TTAA 4 cut(s) 423, 516, 846, 879
Tru9I TTAA 4 cut(s) 423, 516, 846, 879
TscAI CASTG 1 cut(s) 809
TseI GCWGC 3 cut(s) 274, 292, 511
TspDTI ATGAA 6 cut(s) 128, 608, 1043, 1157, 1185, 1260
TspMI CCCGGG 1 cut(s) 201
TspRI CASTG 1 cut(s) 809
Tth111I GACNNNGTC 1 cut(s) 599
VpaK11BI GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1037
VspI ATTAAT 1 cut(s) 423
XapI RAATTY 3 cut(s) 623, 1084, 1216
XbaI TCTAGA 1 cut(s) 1220
XceI RCATGY 2 cut(s) 178, 1151
XmaI CCCGGG 1 cut(s) 201
XmiI GTMKAC 1 cut(s) 932
XspI CTAG 4 cut(s) 917, 1065, 1155, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.