Rroxscaffold_7G00186870

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0006237
Physical Location & Seq
Reverse (-)
26220770 .. 26224607
3838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186870.1

Sequence Viewer

Length: 1500 bp
ATGGACACCGGCGGCAACTCGCTGGCGTCGGGTCCCGACGGCGTGAAGCGCAAAGTAAGCTACTTCTACGACCCGGAAGTGGGAAATTACTATTATGGGCAGGGCCATCCGATGAAGCCCCACCGCATCAGAATGACCCACGCCCTTTTGGCCCATTACGGTCTTCTCCAGCACATGCAGGTCCTCAAACCCTACCCGGCCCGGGACCGGGACCTCTGCCGCTTCCACGCCGACGACTACGTGGCGTTTCTCCGGAGCATTACCCCCGAAACGCAGCAGGACCAGCTGAGGCAGCTGAAGAGGTTCAATGTGGGAGAGGATTGCCCTGTGTTTGATGGGTTGTACTCCTTTTGTCAGACTTATGCCGGTGGGTCTGTTGGTGGGGCTGTCAAGCTGAATCATGGGATTTGCGACATTTCGATTAATTGGGCTGGGGGTTGCACCATGCTAAGAAGTGTGAAGCTTCTGGGTTTTGTTATGTCAATGACATTGTGCTCGCAATCTTGGAGCTGCTTAAACAACACGAGTGTGTTGATGTGTTTAAAACAGAGAGTTTTGTATGTGGACATTGATATCCACCATGGGGACGGTGTTGAGGAGGCGTTTTACACAACAGACAGGGTCATGACGGTTTCGTTTCATAAATTTGGAGACTATTTTCCGGGGACGGGGGACATTCGCGATATTGGGTACGGGAAAGGGAAGTATTACTCCCTCAATGTTCCGTTAGATGATGGAATTGATGATGAGAGCTACCATTACTTGTTCAAACCCCTCATTGGGAAGGTTATGGAGATATTTAGGCCTGGTGCTGTTGTTCTACAGTGTGGTGCTGATTCCTTATCTGGGGATAGGCTTGGTTGCTTTAATCTTTCCATTAAGGGTCATGCTGAATGTGTTAGATACATGAGATCCTTCAATGTCCCGCTTTTGCTTCTAGGCGGTGGCGGGTATACTATTCGCAATGTTGCTCGTTGCTGGTGCTACGAGACTGGTGTTGCACTTGGAGCAGAAATTGAGGACAAAATGCCACAGCATGAGTATTATGAGTATTTTGGTCCAGACTATACTCTTCATGTTGCCCCTAGTAATATGGAAAACAAGAATTCTCATCAGTTACTGGAAGAAATACGATCGAAACTTCTTGAAAATCTCTCCAGGCTTCAGCATGCACCTAGTGTCCAATTTCATGAAAGGCCTCCTGAAAATGAGCTTCCAGAGGAAGATGAGGATCAGGATGACAGAGACGAGAGATGGGATGCCGATTCTGATATGGAGCTTGATGACAGACCTATAGCAGCAAGAAGAGTAAAGAAAGAGATTGTTGAACCTGAGGTTAAAGATCCGAAAGGAGCTGTAGAGAATTCTAGAGGCTATGATGCAGGACTGGATGAAATTACAACAAGTGCAAAGGCTTTGGATATGGGCTCTGGGTCTATGGAGGAACCAAGTGTAAAAGTTGAACAAGAGTCTCTAAATAAGCCTGCAGATCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

499

Amino Acids

56.19

Weight (kDa)

5.17

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 331 2.4e-66 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 953
AccII CGCG 1 cut(s) 681
AccIII TCCGGA 1 cut(s) 252
AciI CCGC 6 cut(s) 12, 124, 220, 926, 942, 948
AclWI GGATC 3 cut(s) 906, 1239, 1337
AcsI RAATTY 3 cut(s) 644, 1105, 1363
AcuI CTGAAG 2 cut(s) 317, 1148
AcyI GRCGYC 1 cut(s) 26
AdeI CACNNNGTG 1 cut(s) 1178
AfaI GTAC 2 cut(s) 344, 692
AgsI TTSAA 6 cut(s) 307, 769, 919, 1148, 1328, 1463
AjnI CCWGG 2 cut(s) 805, 1157
AleI CACNNNNGTG 1 cut(s) 527
Alw21I GWGCWC 1 cut(s) 497
Alw26I GTCTC 4 cut(s) 645, 983, 1239, 1476
AlwI GGATC 3 cut(s) 906, 1239, 1337
AlwNI CAGNNNCTG 1 cut(s) 1120
Ama87I CYCGRG 1 cut(s) 201
Aor13HI TCCGGA 1 cut(s) 252
AoxI GGCC 5 cut(s) 103, 150, 198, 803, 1196
ApeKI GCWGC 4 cut(s) 274, 292, 510, 1298
ApoI RAATTY 3 cut(s) 644, 1105, 1363
AseI ATTAAT 1 cut(s) 423
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 9 cut(s) 32, 103, 151, 181, 199, 205, 211, 280, 1058
AsuC2I CCSGG 6 cut(s) 74, 197, 202, 203, 209, 663
AvaI CYCGRG 1 cut(s) 201
AvaII GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1058
AxyI CCTNAGG 1 cut(s) 1332
BanII GRGCYC 1 cut(s) 1430
BauI CACGAG 1 cut(s) 523
BbsI GAAGAC 1 cut(s) 155
Bbv12I GWGCWC 1 cut(s) 497
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 4 cut(s) 286, 304, 497, 1310
BccI CCATC 4 cut(s) 114, 329, 728, 1248
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 2 cut(s) 807, 1159
BcnI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 663
BcoDI GTCTC 4 cut(s) 645, 983, 1239, 1476
BfaI CTAG 4 cut(s) 938, 1086, 1176, 1368
BfmI CTRYAG 4 cut(s) 821, 1293, 1356, 1485
BfuAI ACCTGC 1 cut(s) 169
BglI GCCNNNNNGGC 1 cut(s) 149
BisI GCNGC 6 cut(s) 13, 220, 275, 293, 511, 1299
BlsI GCNGC 6 cut(s) 14, 221, 276, 294, 512, 1300
Bme1390I CCNGG 8 cut(s) 74, 197, 202, 203, 209, 663, 807, 1159
Bme18I GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1058
BmeT110I CYCGRG 1 cut(s) 201
BmgT120I GGNCC 9 cut(s) 32, 103, 151, 181, 199, 205, 211, 280, 1058
BmiI GGNNCC 5 cut(s) 33, 34, 206, 212, 1446
BmrFI CCNGG 8 cut(s) 74, 197, 202, 203, 209, 663, 807, 1159
BmsI GCATC 3 cut(s) 135, 1249, 1369
BpiI GAAGAC 1 cut(s) 155
BpmI CTGGAG 2 cut(s) 152, 1141
Bpu10I CCTNAGC 1 cut(s) 287
BpuMI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 663
BsaAI YACGTR 1 cut(s) 241
BsaBI GATNNNNATC 1 cut(s) 1230
BsaHI GRCGYC 1 cut(s) 26
BsaJI CCNNGG 3 cut(s) 201, 580, 662
BsaWI WCCGGW 1 cut(s) 252
Bse118I RCCGGY 2 cut(s) 8, 365
Bse1I ACTGG 3 cut(s) 997, 1125, 1392
Bse21I CCTNAGG 1 cut(s) 1332
Bse3DI GCAATG 1 cut(s) 970
Bse8I GATNNNNATC 1 cut(s) 1230
BseAI TCCGGA 1 cut(s) 252
BseBI CCWGG 2 cut(s) 807, 1159
BseDI CCNNGG 3 cut(s) 201, 580, 662
BseGI GGATG 4 cut(s) 106, 1243, 1264, 1396
BseJI GATNNNNATC 1 cut(s) 1230
BseMI GCAATG 1 cut(s) 970
BseMII CTCAG 2 cut(s) 278, 1323
BseNI ACTGG 3 cut(s) 997, 1125, 1392
BseRI GAGGAG 1 cut(s) 611
BseXI GCAGC 4 cut(s) 286, 304, 497, 1310
BseYI CCCAGC 1 cut(s) 431
Bsh1236I CGCG 1 cut(s) 681
Bsh1285I CGRYCG 1 cut(s) 1136
BshFI GGCC 5 cut(s) 105, 152, 200, 805, 1198
BsiEI CGRYCG 1 cut(s) 1136
BsiHKAI GWGCWC 1 cut(s) 497
BsiHKCI CYCGRG 1 cut(s) 201
BsiSI CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 662
BslFI GGGAC 7 cut(s) 18, 218, 224, 599, 679, 686, 908
BsmAI GTCTC 4 cut(s) 645, 983, 1239, 1476
BsmBI CGTCTC 1 cut(s) 1239
BsmFI GGGAC 7 cut(s) 18, 218, 224, 599, 679, 686, 908
BsnI GGCC 5 cut(s) 105, 152, 200, 805, 1198
BsoBI CYCGRG 1 cut(s) 201
Bsp1286I GDGCHC 2 cut(s) 497, 1430
Bsp13I TCCGGA 1 cut(s) 252
Bsp143I GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
Bsp19I CCATGG 1 cut(s) 580
Bsp68I TCGCGA 1 cut(s) 681
BspACI CCGC 6 cut(s) 12, 124, 220, 926, 942, 948
BspANI GGCC 5 cut(s) 105, 152, 200, 805, 1198
BspCNI CTCAG 2 cut(s) 279, 1324
BspEI TCCGGA 1 cut(s) 252
BspFNI CGCG 1 cut(s) 681
BspHI TCATGA 2 cut(s) 624, 1189
BspLI GGNNCC 5 cut(s) 33, 34, 206, 212, 1446
BspMAI CTGCAG 1 cut(s) 1489
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 3 cut(s) 906, 1239, 1337
BsrDI GCAATG 1 cut(s) 970
BsrFI RCCGGY 2 cut(s) 8, 365
BsrI ACTGG 3 cut(s) 997, 1125, 1392
BssAI RCCGGY 2 cut(s) 8, 365
BssECI CCNNGG 3 cut(s) 201, 580, 662
BssMI GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
BssNAI GTATAC 1 cut(s) 954
BssNI GRCGYC 1 cut(s) 26
BssSI CACGAG 1 cut(s) 523
BssT1I CCWWGG 1 cut(s) 580
Bst1107I GTATAC 1 cut(s) 954
Bst2BI CACGAG 1 cut(s) 523
Bst2UI CCWGG 2 cut(s) 807, 1159
Bst4CI ACNGT 4 cut(s) 161, 590, 631, 825
Bst6I CTCTTC 3 cut(s) 293, 1077, 1300
BstACI GRCGYC 1 cut(s) 26
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 4 cut(s) 24, 497, 1170, 1485
BstDEI CTNAG 3 cut(s) 287, 449, 1332
BstDSI CCRYGG 1 cut(s) 580
BstF5I GGATG 4 cut(s) 106, 1243, 1264, 1396
BstFNI CGCG 1 cut(s) 681
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 5 cut(s) 914, 1136, 1234, 1345, 1492
BstMAI GTCTC 4 cut(s) 645, 983, 1239, 1476
BstMBI GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
BstMCI CGRYCG 1 cut(s) 1136
BstMWI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 1007
BstNI CCWGG 2 cut(s) 807, 1159
BstNSI RCATGY 2 cut(s) 178, 1172
BstSCI CCNGG 8 cut(s) 72, 195, 200, 201, 207, 661, 805, 1157
BstSFI CTRYAG 4 cut(s) 821, 1293, 1356, 1485
BstUI CGCG 1 cut(s) 681
BstV1I GCAGC 4 cut(s) 286, 304, 497, 1310
BstV2I GAAGAC 1 cut(s) 155
BstX2I RGATCY 2 cut(s) 911, 1342
BstYI RGATCY 2 cut(s) 911, 1342
BstZ17I GTATAC 1 cut(s) 954
Bsu36I CCTNAGG 1 cut(s) 1332
BsuRI GGCC 5 cut(s) 105, 152, 200, 805, 1198
BtgI CCRYGG 1 cut(s) 580
BtsCI GGATG 4 cut(s) 106, 1243, 1264, 1396
BtsIMutI CAGTG 1 cut(s) 830
BtuMI TCGCGA 1 cut(s) 681
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 24, 497, 1170, 1485
CaiI CAGNNNCTG 1 cut(s) 1120
CciI TCATGA 2 cut(s) 624, 1189
CfoI GCGC 1 cut(s) 51
Cfr10I RCCGGY 2 cut(s) 8, 365
Cfr13I GGNCC 9 cut(s) 32, 103, 151, 181, 199, 205, 211, 280, 1058
Cfr9I CCCGGG 1 cut(s) 201
CseI GACGC 1 cut(s) 15
Csp6I GTAC 2 cut(s) 343, 691
CviQI GTAC 2 cut(s) 343, 691
DdeI CTNAG 3 cut(s) 287, 449, 1332
DpnI GATC 5 cut(s) 913, 1135, 1233, 1344, 1491
DpnII GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
DraI TTTAAA 1 cut(s) 543
DraIII CACNNNGTG 1 cut(s) 1178
Eam1104I CTCTTC 3 cut(s) 293, 1077, 1300
EarI CTCTTC 3 cut(s) 293, 1077, 1300
Eco130I CCWWGG 1 cut(s) 580
Eco147I AGGCCT 2 cut(s) 805, 1198
Eco24I GRGCYC 1 cut(s) 1430
Eco32I GATATC 1 cut(s) 574
Eco47I GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1058
Eco57I CTGAAG 2 cut(s) 317, 1148
Eco81I CCTNAGG 1 cut(s) 1332
Eco88I CYCGRG 1 cut(s) 201
EcoO109I RGGNCCY 3 cut(s) 32, 181, 211
EcoRI GAATTC 2 cut(s) 1105, 1363
EcoRII CCWGG 2 cut(s) 805, 1157
EcoRV GATATC 1 cut(s) 574
EcoT14I CCWWGG 1 cut(s) 580
EcoT38I GRGCYC 1 cut(s) 1430
ErhI CCWWGG 1 cut(s) 580
Esp3I CGTCTC 1 cut(s) 1239
FaqI GGGAC 7 cut(s) 18, 218, 224, 599, 679, 686, 908
FauI CCCGC 2 cut(s) 933, 941
FblI GTMKAC 1 cut(s) 953
Fnu4HI GCNGC 6 cut(s) 13, 220, 275, 293, 511, 1299
FokI GGATG 4 cut(s) 93, 1250, 1271, 1403
FriOI GRGCYC 1 cut(s) 1430
Fsp4HI GCNGC 6 cut(s) 13, 220, 275, 293, 511, 1299
FspBI CTAG 4 cut(s) 938, 1086, 1176, 1368
GlaI GCGC 1 cut(s) 50
GluI GCNGC 6 cut(s) 13, 220, 275, 293, 511, 1299
GsaI CCCAGC 1 cut(s) 435
GsuI CTGGAG 2 cut(s) 152, 1141
HaeIII GGCC 5 cut(s) 105, 152, 200, 805, 1198
HapII CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 662
HgaI GACGC 1 cut(s) 15
HhaI GCGC 1 cut(s) 51
Hin1I GRCGYC 1 cut(s) 26
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HindIII AAGCTT 1 cut(s) 461
HinfI GANTC 4 cut(s) 397, 836, 1265, 1469
HpaII CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 662
Hpy166II GTNNAC 2 cut(s) 565, 954
Hpy188I TCNGA 6 cut(s) 111, 131, 357, 1270, 1347, 1494
Hpy8I GTNNAC 2 cut(s) 565, 954
Hpy99I CGWCG 3 cut(s) 31, 41, 236
HpyAV CCTTC 2 cut(s) 778, 925
HpyCH4III ACNGT 4 cut(s) 161, 590, 631, 825
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 7 cut(s) 178, 441, 1001, 1172, 1382, 1409, 1487
HpyF10VI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 1007
HpyF3I CTNAG 3 cut(s) 287, 449, 1332
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 26
HspAI GCGC 1 cut(s) 49
KflI GGGWCCC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 252
Kzo9I GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
LmnI GCTCC 5 cut(s) 255, 507, 1007, 1276, 1352
Lsp1109I GCAGC 4 cut(s) 286, 304, 497, 1310
LweI GCATC 3 cut(s) 135, 1249, 1369
MaeI CTAG 4 cut(s) 938, 1086, 1176, 1368
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 1 cut(s) 1116
MalI GATC 5 cut(s) 913, 1135, 1233, 1344, 1491
MboI GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
MboII GAAGA 6 cut(s) 155, 310, 1064, 1136, 1235, 1317
MflI RGATCY 2 cut(s) 911, 1342
MhlI GDGCHC 2 cut(s) 497, 1430
MluCI AATT 9 cut(s) 85, 424, 644, 738, 1014, 1105, 1184, 1363, 1395
MlyI GAGTC 1 cut(s) 1478
MroI TCCGGA 1 cut(s) 252
MroXI GAANNNNTTC 1 cut(s) 302
MseI TTAA 6 cut(s) 423, 515, 542, 867, 879, 1338
MslI CAYNNNNRTG 2 cut(s) 131, 527
MspA1I CMGCKG 2 cut(s) 286, 295
MspI CCGG 8 cut(s) 9, 74, 197, 202, 208, 253, 366, 662
MspR9I CCNGG 8 cut(s) 74, 197, 202, 203, 209, 663, 807, 1159
MvaI CCWGG 2 cut(s) 807, 1159
MvnI CGCG 1 cut(s) 681
MwoI GCNNNNNNNGC 6 cut(s) 48, 57, 149, 283, 292, 1007
NciI CCSGG 6 cut(s) 74, 197, 202, 203, 209, 663
NcoI CCATGG 1 cut(s) 580
NdeII GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
NlaIV GGNNCC 5 cut(s) 33, 34, 206, 212, 1446
NruI TCGCGA 1 cut(s) 681
NspI RCATGY 2 cut(s) 178, 1172
OliI CACNNNNGTG 1 cut(s) 527
PaeI GCATGC 1 cut(s) 1172
PagI TCATGA 2 cut(s) 624, 1189
PceI AGGCCT 2 cut(s) 805, 1198
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 3 cut(s) 397, 836, 1265
PflFI GACNNNGTC 1 cut(s) 620
PkrI GCNGC 6 cut(s) 14, 221, 276, 294, 512, 1300
Ple19I CGATCG 1 cut(s) 1136
PleI GAGTC 1 cut(s) 1477
PpsI GAGTC 1 cut(s) 1477
Ppu21I YACGTR 1 cut(s) 241
PpuMI RGGWCCY 3 cut(s) 32, 181, 211
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 3 cut(s) 32, 181, 211
Psp6I CCWGG 2 cut(s) 805, 1157
PspFI CCCAGC 1 cut(s) 431
PspGI CCWGG 2 cut(s) 805, 1157
PspN4I GGNNCC 5 cut(s) 33, 34, 206, 212, 1446
PspPI GGNCC 9 cut(s) 32, 103, 151, 181, 199, 205, 211, 280, 1058
PspPPI RGGWCCY 3 cut(s) 32, 181, 211
PstI CTGCAG 1 cut(s) 1489
PstNI CAGNNNCTG 1 cut(s) 1120
PsuI RGATCY 2 cut(s) 911, 1342
PsyI GACNNNGTC 1 cut(s) 620
PvuI CGATCG 1 cut(s) 1136
PvuII CAGCTG 2 cut(s) 286, 295
RruI TCGCGA 1 cut(s) 681
RsaI GTAC 2 cut(s) 344, 692
RsaNI GTAC 2 cut(s) 343, 691
RseI CAYNNNNRTG 2 cut(s) 131, 527
SaqAI TTAA 6 cut(s) 423, 515, 542, 867, 879, 1338
SatI GCNGC 6 cut(s) 13, 220, 275, 293, 511, 1299
Sau3AI GATC 5 cut(s) 911, 1133, 1231, 1342, 1489
Sau96I GGNCC 9 cut(s) 32, 103, 151, 181, 199, 205, 211, 280, 1058
SchI GAGTC 1 cut(s) 1478
ScrFI CCNGG 8 cut(s) 74, 197, 202, 203, 209, 663, 807, 1159
SduI GDGCHC 2 cut(s) 497, 1430
SfaNI GCATC 3 cut(s) 135, 1249, 1369
SfcI CTRYAG 4 cut(s) 821, 1293, 1356, 1485
SgrAI CRCCGGYG 1 cut(s) 8
SinI GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1058
SmaI CCCGGG 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 131, 527
SphI GCATGC 1 cut(s) 1172
Sse9I AATT 9 cut(s) 85, 424, 644, 738, 1014, 1105, 1184, 1363, 1395
SseBI AGGCCT 2 cut(s) 805, 1198
SsiI CCGC 6 cut(s) 12, 124, 220, 926, 942, 948
SspMI CTAG 4 cut(s) 938, 1086, 1176, 1368
StuI AGGCCT 2 cut(s) 805, 1198
StyD4I CCNGG 8 cut(s) 72, 195, 200, 201, 207, 661, 805, 1157
StyI CCWWGG 1 cut(s) 580
TaaI ACNGT 4 cut(s) 161, 590, 631, 825
TaiI ACGT 1 cut(s) 243
TaqI TCGA 2 cut(s) 419, 1136
TasI AATT 9 cut(s) 85, 424, 644, 738, 1014, 1105, 1184, 1363, 1395
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 15, 222
TfiI GAWTC 3 cut(s) 397, 836, 1265
Tru1I TTAA 6 cut(s) 423, 515, 542, 867, 879, 1338
Tru9I TTAA 6 cut(s) 423, 515, 542, 867, 879, 1338
TscAI CASTG 1 cut(s) 830
TseI GCWGC 4 cut(s) 274, 292, 510, 1298
TspDTI ATGAA 6 cut(s) 128, 629, 1064, 1178, 1206, 1407
TspGWI ACGGA 1 cut(s) 714
TspMI CCCGGG 1 cut(s) 201
TspRI CASTG 1 cut(s) 830
Tth111I GACNNNGTC 1 cut(s) 620
VpaK11BI GGWCC 6 cut(s) 32, 181, 205, 211, 280, 1058
VspI ATTAAT 1 cut(s) 423
XapI RAATTY 3 cut(s) 644, 1105, 1363
XbaI TCTAGA 1 cut(s) 1367
XceI RCATGY 2 cut(s) 178, 1172
XmaI CCCGGG 1 cut(s) 201
XmiI GTMKAC 1 cut(s) 953
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 4 cut(s) 938, 1086, 1176, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.