Rorug06G0143200

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0006237
Physical Location & Seq
Reverse (-)
20360938 .. 20363431
2494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0143200.1

Sequence Viewer

Length: 1827 bp
ATGCTTCTCAATGTGTTATGCAGTTGGTTGCTCATAGTCACCGTTCTAGATGTAGATATTGTTGTGCATGGCGGGTCCGTAGGTCCCGAAAATTGCACACAGGCTCGATGTAAAGACCATGGCCCTGCAATCCGATTCCCATTTCGACTAAAAGGAATGCAACCACTCCATTGCGGTTACCCAGGCTTTGATCTGTCATGCAACAAAGACAAGCAGACTGTGCTCCAGATCACCCCATCATCAGCAGACAAGTTCTTGGTTAAAAGGATTGATTACACAGCTCAGGAAATTGAAATATATATTTATAATAAACATTATGATTATTACGATGATTTCAAAGATATTTGTATTCCTAGACAGATTTTCGAGCTCAGTTCCTCTCCATTCGAATTCTCAGACGCCCAACGGAAAACTGACTATACCATATTCAGTTGTCCACCGTCAGATGAAAGAGATCGGCTTCCTTATCAGCTGGCGAAACTGAGCCCTTGCTTTGGCAATCACAGCAACAAGATGTATGCTTTTGATGATTCAGACCTTGAATCCACGCCCGAGCTGGTGTCGTGTACCAAGGTGGAAGATTACAGATCAGTACCATCTTTTATCATGCAGCCTCTTCTGAAGCTCAAATGGTCCAGACCATCGTGTAAACGTTGCGAAGAGATGGGCAAGACATGCGGATTGCTGAATCAAGTTGCAGATGACCAGACCACTCAAGAAACTCAATGTTTAGATGTGCCAAAAGGTCCTAATCGTGGAAGACAAATCTTAGAGATATTAGGCATTTGTGCACTCGTTACGGTTTTCATAGGAGCGGCGACTGTATTGTACTATGTGTATAGTTCTAAGAAAATAGAAGAAGAAAGTCAATTGAGAATTGAAAAGTTTTTGGATGATTATAGAGCTCTTAAACCAAGTAGATATGCCTATGATGATATTAGGCGAATAACAAATCGATTTGAGGACAAGTTGGGCCAAGGAGCTTATGGCACCGTGTACAAAGGAAAGCTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCGACAGTTCAAATGAAAAGGGGGAAGATTTCATTAATGAAGTGGGAACAATGGGTCTCATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTTTGTGCTGATGGATTCATACGAGCTCTTATTTATGAGTACTTACCAAATGGTTCATTGCAGAATTTCTTGTCATCTGCAGATGATAAGAACTCATTTCTTGGTTGGGAAAAGTTGCAAAATATTGCTTTAGGTATAGCTAAAGGAATTGAATATCTTCACCAAGGGTGTGACCAGAGAATCCTCCATTTTGATATCAAACCTAATAACATTTTGCTAGACCAGGATTTCACTCCAAAAGTTTCTGATTTTGGTCTAGCCAAGTTGTGCTCTAAGGATCAGAGTGCAATATCCATGACTACAGCTAGGGGGACCATGGGCTACATTGCACCAGAAGTTTTCTCTAGGAACTTCGGAAATGTGTCCTATAAGTCAGATGTATATAGTTTTGGAGTCTTGCTGCTTGAAATGGTTGGGGGAAAGAAATATTTTAAAGTTATGGAGGACTCCACCAGCCATATCTATTTCCCAGAATGGATTTATAACCTTTTAGAACAAGGGAGCGATCTACGAATCCATATTGAGGACGAAGGAGATGTTAAAGTTGCTCGAAAACTTGCAATCATTGGTCTATGGTGCATTCAATGGCATCCGGTAGATCGCCCATCCATGAACATTGTAGTTCAAATGTTGGAGAGAGAAGGTGACAATCTAACCATGCCTCCTTATCCCTTTGCCTCTACTTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

608

Amino Acids

69.03

Weight (kDa)

5.59

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 32 - 100 4.8e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 320 - 588 1.2e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 321 - 587 2.3e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 306, 1617
AccB1I GGYRCC 1 cut(s) 989
AccBSI CCGCTC 1 cut(s) 815
AciI CCGC 4 cut(s) 72, 174, 678, 815
AclI AACGTT 1 cut(s) 652
AclWI GGATC 1 cut(s) 1419
AcsI RAATTY 2 cut(s) 389, 1198
AcuI CTGAAG 1 cut(s) 641
AcyI GRCGYC 1 cut(s) 399
AfaI GTAC 5 cut(s) 568, 594, 830, 998, 1175
AfiI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
AjnI CCWGG 2 cut(s) 181, 1356
Alw21I GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
Alw26I GTCTC 1 cut(s) 1103
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 1 cut(s) 1419
Ama87I CYCGRG 1 cut(s) 551
AoxI GGCC 2 cut(s) 121, 973
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 2 cut(s) 610, 1534
ApoI RAATTY 2 cut(s) 389, 1198
AseI ATTAAT 1 cut(s) 1077
Asp700I GAANNNNTTC 2 cut(s) 1009, 1290
AspS9I GGNCC 7 cut(s) 75, 83, 122, 633, 746, 973, 1446
AsuHPI GGTGA 4 cut(s) 31, 223, 1286, 1790
AsuII TTCGAA 1 cut(s) 387
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 5 cut(s) 75, 83, 633, 746, 1446
BaeGI GKGCMC 1 cut(s) 793
BanI GGYRCC 1 cut(s) 989
BanII GRGCYC 4 cut(s) 372, 488, 907, 1162
BbsI GAAGAC 1 cut(s) 766
Bbv12I GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
BbvI GCAGC 2 cut(s) 622, 1521
BccI CCATC 6 cut(s) 244, 604, 649, 658, 1139, 1747
BciT130I CCWGG 2 cut(s) 183, 1358
BcoDI GTCTC 1 cut(s) 1103
BfaI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
BfmI CTRYAG 2 cut(s) 1212, 1434
BisI GCNGC 3 cut(s) 611, 816, 1535
BlsI GCNGC 3 cut(s) 612, 817, 1536
BmcAI AGTACT 1 cut(s) 1175
Bme1390I CCNGG 2 cut(s) 183, 1358
Bme18I GGWCC 5 cut(s) 75, 83, 633, 746, 1446
BmeT110I CYCGRG 1 cut(s) 551
BmgT120I GGNCC 7 cut(s) 75, 83, 122, 633, 746, 973, 1446
BmiI GGNNCC 4 cut(s) 76, 85, 991, 1447
BmrFI CCNGG 2 cut(s) 183, 1358
BmsI GCATC 1 cut(s) 1732
BpiI GAAGAC 1 cut(s) 766
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 282
Bpu14I TTCGAA 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 699
Bsa29I ATCGAT 1 cut(s) 955
BsaHI GRCGYC 1 cut(s) 399
BsaI GGTCTC 1 cut(s) 1103
BsaJI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BsaWI WCCGGW 1 cut(s) 1726
BsaXI ACNNNNNCTCC 2 cut(s) 1780, 1810
Bsc4I CCNNNNNNNGG 3 cut(s) 494, 755, 1657
Bse3DI GCAATG 3 cut(s) 169, 1190, 1458
BseBI CCWGG 2 cut(s) 183, 1358
BseCI ATCGAT 1 cut(s) 955
BseDI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BseGI GGATG 4 cut(s) 898, 1101, 1723, 1739
BseLI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
BseMI GCAATG 3 cut(s) 169, 1190, 1458
BseMII CTCAG 4 cut(s) 296, 385, 408, 473
BseSI GKGCMC 1 cut(s) 793
BseXI GCAGC 2 cut(s) 622, 1521
BshFI GGCC 2 cut(s) 123, 975
BshNI GGYRCC 1 cut(s) 989
BshVI ATCGAT 1 cut(s) 955
BsiHKAI GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 1 cut(s) 1727
BslFI GGGAC 2 cut(s) 69, 1459
BslI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
BsmAI GTCTC 1 cut(s) 1103
BsmFI GGGAC 2 cut(s) 69, 1459
BsmI GAATGC 2 cut(s) 162, 1713
BsnI GGCC 2 cut(s) 123, 975
Bso31I GGTCTC 1 cut(s) 1103
BsoBI CYCGRG 1 cut(s) 551
Bsp119I TTCGAA 1 cut(s) 387
Bsp1286I GDGCHC 7 cut(s) 225, 372, 488, 793, 907, 1162, 1406
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
Bsp19I CCATGG 2 cut(s) 118, 1449
BspACI CCGC 4 cut(s) 72, 174, 678, 815
BspANI GGCC 2 cut(s) 123, 975
BspCNI CTCAG 4 cut(s) 295, 384, 407, 474
BspDI ATCGAT 1 cut(s) 955
BspLI GGNNCC 4 cut(s) 76, 85, 991, 1447
BspMAI CTGCAG 1 cut(s) 1216
BspPI GGATC 1 cut(s) 1419
BspT104I TTCGAA 1 cut(s) 387
BspT107I GGYRCC 1 cut(s) 989
BspTNI GGTCTC 1 cut(s) 1103
BsrBI CCGCTC 1 cut(s) 815
BsrDI GCAATG 3 cut(s) 169, 1190, 1458
BsrGI TGTACA 1 cut(s) 996
BssECI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BssMI GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
BssNI GRCGYC 1 cut(s) 399
BssT1I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
Bst2UI CCWGG 2 cut(s) 183, 1358
Bst4CI ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
Bst6I CTCTTC 2 cut(s) 621, 654
BstACI GRCGYC 1 cut(s) 399
BstAPI GCANNNNNTGC 2 cut(s) 220, 675
BstAUI TGTACA 1 cut(s) 996
BstBI TTCGAA 1 cut(s) 387
BstC8I GCNNGC 1 cut(s) 474
BstDEI CTNAG 7 cut(s) 282, 371, 394, 482, 769, 846, 1407
BstDSI CCRYGG 2 cut(s) 118, 1449
BstEII GGTNACC 1 cut(s) 176
BstF5I GGATG 4 cut(s) 898, 1101, 1723, 1739
BstKTI GATC 7 cut(s) 193, 231, 457, 590, 1414, 1642, 1735
BstMAI GTCTC 1 cut(s) 1103
BstMBI GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
BstMWI GCNNNNNNNGC 4 cut(s) 220, 504, 675, 1131
BstNI CCWGG 2 cut(s) 183, 1358
BstNSI RCATGY 1 cut(s) 678
BstPI GGTNACC 1 cut(s) 176
BstSCI CCNGG 2 cut(s) 181, 1356
BstSFI CTRYAG 2 cut(s) 1212, 1434
BstSLI GKGCMC 1 cut(s) 793
BstV1I GCAGC 2 cut(s) 622, 1521
BstV2I GAAGAC 1 cut(s) 766
Bsu15I ATCGAT 1 cut(s) 955
BsuRI GGCC 2 cut(s) 123, 975
BsuTUI ATCGAT 1 cut(s) 955
BtgI CCRYGG 2 cut(s) 118, 1449
BtsCI GGATG 4 cut(s) 898, 1101, 1723, 1739
Cac8I GCNNGC 1 cut(s) 474
Cfr13I GGNCC 7 cut(s) 75, 83, 122, 633, 746, 973, 1446
ClaI ATCGAT 1 cut(s) 955
CseI GACGC 1 cut(s) 407
Csp6I GTAC 5 cut(s) 567, 593, 829, 997, 1174
CviQI GTAC 5 cut(s) 567, 593, 829, 997, 1174
DdeI CTNAG 7 cut(s) 282, 371, 394, 482, 769, 846, 1407
DpnI GATC 7 cut(s) 192, 230, 456, 589, 1413, 1641, 1734
DpnII GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
DraI TTTAAA 1 cut(s) 1567
Eam1104I CTCTTC 2 cut(s) 621, 654
EarI CTCTTC 2 cut(s) 621, 654
Ecl136II GAGCTC 3 cut(s) 370, 905, 1160
Eco130I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
Eco24I GRGCYC 4 cut(s) 372, 488, 907, 1162
Eco31I GGTCTC 1 cut(s) 1103
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 5 cut(s) 75, 83, 633, 746, 1446
Eco53kI GAGCTC 3 cut(s) 370, 905, 1160
Eco57I CTGAAG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 551
Eco91I GGTNACC 1 cut(s) 176
EcoICRI GAGCTC 3 cut(s) 370, 905, 1160
EcoO109I RGGNCCY 2 cut(s) 83, 746
EcoO65I GGTNACC 1 cut(s) 176
EcoRI GAATTC 1 cut(s) 389
EcoRII CCWGG 2 cut(s) 181, 1356
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
EcoT38I GRGCYC 4 cut(s) 372, 488, 907, 1162
ErhI CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 2 cut(s) 69, 1459
FauI CCCGC 1 cut(s) 65
Fnu4HI GCNGC 3 cut(s) 611, 816, 1535
FokI GGATG 4 cut(s) 905, 1088, 1710, 1726
FriOI GRGCYC 4 cut(s) 372, 488, 907, 1162
Fsp4HI GCNGC 3 cut(s) 611, 816, 1535
FspBI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
GluI GCNGC 3 cut(s) 611, 816, 1535
GsuI CTGGAG 1 cut(s) 209
HaeIII GGCC 2 cut(s) 123, 975
HapII CCGG 1 cut(s) 1727
HgaI GACGC 1 cut(s) 407
Hin1I GRCGYC 1 cut(s) 399
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 9 cut(s) 135, 530, 542, 688, 1149, 1314, 1527, 1580, 1647
HpaII CCGG 1 cut(s) 1727
HphI GGTGA 4 cut(s) 31, 223, 1286, 1790
Hpy166II GTNNAC 5 cut(s) 437, 567, 650, 791, 997
Hpy188III TCNNGA 6 cut(s) 47, 86, 226, 284, 636, 716
Hpy8I GTNNAC 5 cut(s) 437, 567, 650, 791, 997
HpyAV CCTTC 2 cut(s) 1658, 1769
HpyCH4III ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
HpyCH4IV ACGT 1 cut(s) 652
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 504, 675, 1131
HpyF3I CTNAG 7 cut(s) 282, 371, 394, 482, 769, 846, 1407
HpySE526I ACGT 1 cut(s) 652
Hsp92I GRCGYC 1 cut(s) 399
Kzo9I GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
LmnI GCTCC 4 cut(s) 228, 812, 980, 1635
Lsp1109I GCAGC 2 cut(s) 622, 1521
LweI GCATC 1 cut(s) 1732
MaeI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
MaeII ACGT 1 cut(s) 652
MaeIII GTNAC 5 cut(s) 37, 176, 796, 1304, 1778
MalI GATC 7 cut(s) 192, 230, 456, 589, 1413, 1641, 1734
MbiI CCGCTC 1 cut(s) 815
MboI GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
MboII GAAGA 8 cut(s) 590, 608, 671, 771, 869, 872, 1079, 1283
MfeI CAATTG 1 cut(s) 869
MhlI GDGCHC 7 cut(s) 225, 372, 488, 793, 907, 1162, 1406
MluCI AATT 9 cut(s) 91, 288, 389, 869, 876, 1019, 1198, 1281, 1822
MlyI GAGTC 2 cut(s) 1536, 1574
MmeI TCCRAC 1 cut(s) 1746
MroXI GAANNNNTTC 2 cut(s) 1009, 1290
MseI TTAA 5 cut(s) 261, 909, 1077, 1566, 1674
MslI CAYNNNNRTG 1 cut(s) 1113
MspA1I CMGCKG 1 cut(s) 472
MspI CCGG 1 cut(s) 1727
MspR9I CCNGG 2 cut(s) 183, 1358
MunI CAATTG 1 cut(s) 869
Mva1269I GAATGC 2 cut(s) 162, 1713
MvaI CCWGG 2 cut(s) 183, 1358
MwoI GCNNNNNNNGC 4 cut(s) 220, 504, 675, 1131
NcoI CCATGG 2 cut(s) 118, 1449
NdeII GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
NlaIV GGNNCC 4 cut(s) 76, 85, 991, 1447
NmuCI GTSAC 3 cut(s) 37, 1304, 1778
NspI RCATGY 1 cut(s) 678
NspV TTCGAA 1 cut(s) 387
PctI GAATGC 2 cut(s) 162, 1713
PdmI GAANNNNTTC 2 cut(s) 1009, 1290
PfeI GAWTC 7 cut(s) 135, 530, 542, 688, 1149, 1314, 1647
PkrI GCNGC 3 cut(s) 612, 817, 1536
PleI GAGTC 2 cut(s) 1535, 1574
PpsI GAGTC 2 cut(s) 1535, 1574
PpuMI RGGWCCY 2 cut(s) 83, 746
PshBI ATTAAT 1 cut(s) 1077
PsiI TTATAA 2 cut(s) 306, 1617
Psp124BI GAGCTC 3 cut(s) 372, 907, 1162
Psp1406I AACGTT 1 cut(s) 652
Psp5II RGGWCCY 2 cut(s) 83, 746
Psp6I CCWGG 2 cut(s) 181, 1356
PspEI GGTNACC 1 cut(s) 176
PspGI CCWGG 2 cut(s) 181, 1356
PspN4I GGNNCC 4 cut(s) 76, 85, 991, 1447
PspPI GGNCC 7 cut(s) 75, 83, 122, 633, 746, 973, 1446
PspPPI RGGWCCY 2 cut(s) 83, 746
PstI CTGCAG 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 5 cut(s) 568, 594, 830, 998, 1175
RsaNI GTAC 5 cut(s) 567, 593, 829, 997, 1174
RseI CAYNNNNRTG 1 cut(s) 1113
SacI GAGCTC 3 cut(s) 372, 907, 1162
SaqAI TTAA 5 cut(s) 261, 909, 1077, 1566, 1674
SatI GCNGC 3 cut(s) 611, 816, 1535
Sau3AI GATC 7 cut(s) 190, 228, 454, 587, 1411, 1639, 1732
Sau96I GGNCC 7 cut(s) 75, 83, 122, 633, 746, 973, 1446
ScaI AGTACT 1 cut(s) 1175
SchI GAGTC 2 cut(s) 1536, 1574
ScrFI CCNGG 2 cut(s) 183, 1358
SduI GDGCHC 7 cut(s) 225, 372, 488, 793, 907, 1162, 1406
SfaNI GCATC 1 cut(s) 1732
SfcI CTRYAG 2 cut(s) 1212, 1434
SfuI TTCGAA 1 cut(s) 387
SinI GGWCC 5 cut(s) 75, 83, 633, 746, 1446
SmiMI CAYNNNNRTG 1 cut(s) 1113
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
Sse9I AATT 9 cut(s) 91, 288, 389, 869, 876, 1019, 1198, 1281, 1822
SsiI CCGC 4 cut(s) 72, 174, 678, 815
SspI AATATT 2 cut(s) 1258, 1562
SspMI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
SstI GAGCTC 3 cut(s) 372, 907, 1162
StyD4I CCNGG 2 cut(s) 181, 1356
StyI CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
TaaI ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
TaiI ACGT 1 cut(s) 655
TaqI TCGA 7 cut(s) 106, 145, 366, 387, 955, 1044, 1684
TasI AATT 9 cut(s) 91, 288, 389, 869, 876, 1019, 1198, 1281, 1822
TatI WGTACW 3 cut(s) 828, 996, 1173
TauI GCSGC 1 cut(s) 818
TfiI GAWTC 7 cut(s) 135, 530, 542, 688, 1149, 1314, 1647
Tru1I TTAA 5 cut(s) 261, 909, 1077, 1566, 1674
Tru9I TTAA 5 cut(s) 261, 909, 1077, 1566, 1674
TseFI GTSAC 3 cut(s) 37, 1304, 1778
TseI GCWGC 2 cut(s) 610, 1534
Tsp45I GTSAC 3 cut(s) 37, 1304, 1778
TspDTI ATGAA 8 cut(s) 462, 796, 1063, 1071, 1095, 1141, 1179, 1760
TspGWI ACGGA 2 cut(s) 67, 421
VneI GTGCAC 1 cut(s) 789
VpaK11BI GGWCC 5 cut(s) 75, 83, 633, 746, 1446
VspI ATTAAT 1 cut(s) 1077
XapI RAATTY 2 cut(s) 389, 1198
XbaI TCTAGA 1 cut(s) 46
XceI RCATGY 1 cut(s) 678
XcmI CCANNNNNNNNNTGG 2 cut(s) 553, 983
XmnI GAANNNNTTC 2 cut(s) 1009, 1290
XspI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
ZrmI AGTACT 1 cut(s) 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.