MD10G1145400.v1.1

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0006237
Physical Location & Seq
Forward (+)
23179136 .. 23183061
3926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1145400.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGGACACCGGCGGCAACTCTCTAGCGTCGGGTCCCGACGGCGTGAAGAGGAAGGTGAGCTATTTCTACGACCCAGAAGTGGGAAATTACTATTATGGGCAGGGCCACCCGATGAAGCCCCACCGGATTCGGATGACCCACGCCCTCCTCGCCCACTACGGCCTCCTCCAGAACATGCAGGTCCTCAAACCCTACCCGGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGATTACGTGGCGTTCCTCCGGAACATCACCCCGGAAACCCAGCAGGACCAGCTGCGGCAGCTCAAGCGGTTCAATGTCGGCGAGGACTGCCCTGTCTTTGATGGGTTGTACTCGTTTTGCCAGACCTACGCCGGCGGGTCGGTCGGCGGCGCTGTGAAGCTCAACCATGGGATTTGCGACATTTCGATTAATTGGGCTGGAGGTTTGCACCACGCTAAAAAGTGTGAGGCTTCTGGGTTTTGCTATGTGAATGACATTGTTCTTGCAATTTTGGAGCTTCTTAAGCAGCACGAGCGCGTTTTGTATGTGGATATTGATATTCACCATGGAGACGGTGTTGAGGAGGCGTTTTACACGACAGACAGGGTCATGACCGTTTCGTTTCATAAGTTTGGGGATTATTTCCCTGGCACAGGGGACATTCGCGATATTGGGTACGGAAAAGGGAAGTATTACTCCCTTAATGTCCCGTTGGATGACGGGATTGATGATGAGAGCTACCATTACTTGTTCAAGCCCATCATTGGGAAGGTGATGGAAATTTTTAAGCCTGGGGCTGTGGTTCTCCAGTGTGGTGCTGATTCCTTATCTGGAGACAGGCTTGGCTGCTTCAATCTTTCTATCAAAGGTCATGCTGAGTGTGTTAGATATATGAGATCCTTCAACGTCCCGCTCTTGCTTCTAGGTGGTGGTGGCTATACCATTCGCAATGTTGCTCGTTGCTGGTGCTACGAGACAGGAGTAGCACTTGGAGCAGAAATTGAGGACAAAATGCCACAGCACGAGTATTATGAGTATTTTGGTCCAGATTACACTCTTCACGTTGCCCCGAGTAACATGGAAAATAAGAACTCTCATGTGTTACTAGAAGAAATACGGTCAAAGCTTCTTGAAAACCTCTCCACGCTTCAGCATGCACCCAGTGTCCAATTTCAGGACAGACCTCCTGATACTGAGCTTCCGGAGGAGAATGAAGAACAGGATGACCCAGATGAGAGGTGGGATCCAGATTCTGATATGGAGGTTGATGATGAACGTAAGCCTTTACCAAGCAGAGTAAAGAAAGAGATCGTTGAACCTGAGGTTAAAGATCCGAAAGGGACCTCGGAGAATGCTAGAAGCTCAGGCTATGATCCAGCAGTAGATGAGATTACGACAGGAACAAAGGCTTTGGATATGGGCTCTGGATCTGCGGATGAACCAGCTGTGAAGGTTGAACAAGAGACTACGAATAAACCTGCAGACCAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

496

Amino Acids

55.5

Weight (kDa)

4.98

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 324 8.2e-88 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 326
Acc36I ACCTGC 2 cut(s) 169, 1480
AccBSI CCGCTC 1 cut(s) 907
AccII CGCG 4 cut(s) 204, 210, 531, 660
AccIII TCCGGA 2 cut(s) 252, 1195
AclWI GGATC 6 cut(s) 885, 1232, 1245, 1319, 1361, 1429
AcsI RAATTY 1 cut(s) 774
AcuI CTGAAG 1 cut(s) 1127
AdeI CACNNNGTG 1 cut(s) 1157
AfaI GTAC 2 cut(s) 344, 671
AfiI CCNNNNNNNGG 6 cut(s) 79, 80, 647, 758, 759, 1168
AflII CTTAAG 1 cut(s) 515
AgsI TTSAA 7 cut(s) 307, 748, 847, 898, 1127, 1310, 1451
AjnI CCWGG 2 cut(s) 640, 784
Alw26I GTCTC 4 cut(s) 558, 822, 962, 1451
AlwI GGATC 6 cut(s) 885, 1232, 1245, 1319, 1361, 1429
AlwNI CAGNNNCTG 1 cut(s) 1247
Ama87I CYCGRG 1 cut(s) 1063
Aor13HI TCCGGA 2 cut(s) 252, 1195
AoxI GGCC 3 cut(s) 103, 160, 198
ApeKI GCWGC 4 cut(s) 286, 292, 520, 840
ApoI RAATTY 1 cut(s) 774
AseI ATTAAT 1 cut(s) 423
AspLEI GCGC 2 cut(s) 386, 531
AspS9I GGNCC 7 cut(s) 32, 103, 181, 199, 280, 1037, 1335
AsuC2I CCSGG 2 cut(s) 197, 266
AsuHPI GGTGA 4 cut(s) 67, 253, 548, 778
AvaI CYCGRG 1 cut(s) 1063
AvaII GGWCC 5 cut(s) 32, 181, 280, 1037, 1335
AxyI CCTNAGG 1 cut(s) 1314
BamHI GGATCC 1 cut(s) 1237
BanII GRGCYC 1 cut(s) 1418
BauI CACGAG 2 cut(s) 524, 1016
BbvI GCAGC 4 cut(s) 273, 304, 532, 827
BccI CCATC 3 cut(s) 329, 761, 763
BceAI ACGGC 2 cut(s) 55, 175
BciT130I CCWGG 2 cut(s) 642, 786
BcnI CCSGG 2 cut(s) 197, 266
BcoDI GTCTC 4 cut(s) 558, 822, 962, 1451
BfaI CTAG 4 cut(s) 23, 917, 1100, 1350
BfmI CTRYAG 1 cut(s) 1473
BfoI RGCGCY 1 cut(s) 387
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 2 cut(s) 169, 1480
BisI GCNGC 8 cut(s) 13, 220, 287, 290, 293, 382, 521, 841
BlsI GCNGC 8 cut(s) 14, 221, 288, 291, 294, 383, 522, 842
Bme1390I CCNGG 4 cut(s) 197, 266, 642, 786
Bme18I GGWCC 5 cut(s) 32, 181, 280, 1037, 1335
BmeT110I CYCGRG 1 cut(s) 1063
BmgT120I GGNCC 7 cut(s) 32, 103, 181, 199, 280, 1037, 1335
BmiI GGNNCC 4 cut(s) 33, 34, 1239, 1336
BmrFI CCNGG 4 cut(s) 197, 266, 642, 786
BmrI ACTGGG 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 1149
BpmI CTGGAG 4 cut(s) 152, 453, 785, 846
Bpu10I CCTNAGC 1 cut(s) 1357
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 2 cut(s) 197, 266
BsaAI YACGTR 1 cut(s) 241
BsaJI CCNNGG 6 cut(s) 264, 400, 559, 640, 785, 1338
BsaWI WCCGGW 3 cut(s) 123, 252, 1195
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 6 cut(s) 79, 80, 647, 758, 759, 1168
Bse118I RCCGGY 2 cut(s) 8, 365
Bse1I ACTGG 2 cut(s) 802, 1155
Bse21I CCTNAGG 1 cut(s) 1314
Bse3DI GCAATG 1 cut(s) 949
BseAI TCCGGA 2 cut(s) 252, 1195
BseBI CCWGG 2 cut(s) 642, 786
BseDI CCNNGG 6 cut(s) 264, 400, 559, 640, 785, 1338
BseGI GGATG 4 cut(s) 138, 715, 1222, 1435
BseLI CCNNNNNNNGG 6 cut(s) 79, 80, 647, 758, 759, 1168
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 4 cut(s) 861, 1179, 1305, 1371
BseNI ACTGG 2 cut(s) 802, 1155
BseRI GAGGAG 4 cut(s) 137, 155, 590, 1214
BseXI GCAGC 4 cut(s) 273, 304, 532, 827
BseYI CCCAGC 1 cut(s) 273
Bsh1236I CGCG 4 cut(s) 204, 210, 531, 660
Bsh1285I CGRYCG 2 cut(s) 208, 378
BshFI GGCC 3 cut(s) 105, 162, 200
BsiEI CGRYCG 2 cut(s) 208, 378
BsiHKCI CYCGRG 1 cut(s) 1063
BsiSI CCGG 7 cut(s) 9, 124, 197, 253, 266, 366, 1196
BslFI GGGAC 5 cut(s) 18, 665, 686, 887, 1348
BslI CCNNNNNNNGG 6 cut(s) 79, 80, 647, 758, 759, 1168
BsmAI GTCTC 4 cut(s) 558, 822, 962, 1451
BsmBI CGTCTC 1 cut(s) 558
BsmFI GGGAC 5 cut(s) 18, 665, 686, 887, 1348
BsmI GAATGC 1 cut(s) 1351
BsnI GGCC 3 cut(s) 105, 162, 200
BsoBI CYCGRG 1 cut(s) 1063
Bsp1286I GDGCHC 1 cut(s) 1418
Bsp13I TCCGGA 2 cut(s) 252, 1195
Bsp143I GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
Bsp19I CCATGG 2 cut(s) 400, 559
Bsp68I TCGCGA 1 cut(s) 660
BspANI GGCC 3 cut(s) 105, 162, 200
BspCNI CTCAG 4 cut(s) 862, 1180, 1306, 1370
BspEI TCCGGA 2 cut(s) 252, 1195
BspFNI CGCG 4 cut(s) 204, 210, 531, 660
BspHI TCATGA 1 cut(s) 603
BspLI GGNNCC 4 cut(s) 33, 34, 1239, 1336
BspMAI CTGCAG 1 cut(s) 1477
BspMI ACCTGC 2 cut(s) 169, 1480
BspPI GGATC 6 cut(s) 885, 1232, 1245, 1319, 1361, 1429
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 907
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 2 cut(s) 8, 365
BsrI ACTGG 2 cut(s) 802, 1155
BssAI RCCGGY 2 cut(s) 8, 365
BssECI CCNNGG 6 cut(s) 264, 400, 559, 640, 785, 1338
BssMI GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
BssSI CACGAG 2 cut(s) 524, 1016
BssT1I CCWWGG 2 cut(s) 400, 559
Bst2BI CACGAG 2 cut(s) 524, 1016
Bst2UI CCWGG 2 cut(s) 642, 786
Bst4CI ACNGT 3 cut(s) 569, 610, 1113
Bst6I CTCTTC 2 cut(s) 41, 1056
BstAFI CTTAAG 1 cut(s) 515
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 3 cut(s) 202, 367, 1149
BstDEI CTNAG 4 cut(s) 870, 1188, 1314, 1357
BstDSI CCRYGG 2 cut(s) 400, 559
BstENI CCTNNNNNAGG 1 cut(s) 645
BstF5I GGATG 4 cut(s) 138, 715, 1222, 1435
BstFNI CGCG 4 cut(s) 204, 210, 531, 660
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 2 cut(s) 386, 531
BstKTI GATC 6 cut(s) 893, 1240, 1305, 1327, 1369, 1424
BstMAI GTCTC 4 cut(s) 558, 822, 962, 1451
BstMBI GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
BstMCI CGRYCG 2 cut(s) 208, 378
BstMWI GCNNNNNNNGC 9 cut(s) 149, 216, 283, 292, 298, 321, 517, 526, 986
BstNI CCWGG 2 cut(s) 642, 786
BstNSI RCATGY 2 cut(s) 178, 1151
BstSCI CCNGG 4 cut(s) 195, 264, 640, 784
BstSFI CTRYAG 1 cut(s) 1473
BstUI CGCG 4 cut(s) 204, 210, 531, 660
BstV1I GCAGC 4 cut(s) 273, 304, 532, 827
BstX2I RGATCY 4 cut(s) 890, 1237, 1324, 1421
BstYI RGATCY 4 cut(s) 890, 1237, 1324, 1421
Bsu36I CCTNAGG 1 cut(s) 1314
BsuRI GGCC 3 cut(s) 105, 162, 200
BtgI CCRYGG 2 cut(s) 400, 559
BtsCI GGATG 4 cut(s) 138, 715, 1222, 1435
BtsIMutI CAGTG 2 cut(s) 809, 1162
BtuMI TCGCGA 1 cut(s) 660
BveI ACCTGC 2 cut(s) 169, 1480
Cac8I GCNNGC 3 cut(s) 202, 367, 1149
CaiI CAGNNNCTG 1 cut(s) 1247
CciI TCATGA 1 cut(s) 603
CfoI GCGC 2 cut(s) 386, 531
Cfr10I RCCGGY 2 cut(s) 8, 365
Cfr13I GGNCC 7 cut(s) 32, 103, 181, 199, 280, 1037, 1335
CseI GACGC 1 cut(s) 15
Csp6I GTAC 2 cut(s) 343, 670
CviAII CATG 8 cut(s) 175, 401, 560, 604, 866, 1072, 1091, 1148
CviQI GTAC 2 cut(s) 343, 670
DdeI CTNAG 4 cut(s) 870, 1188, 1314, 1357
DpnI GATC 6 cut(s) 892, 1239, 1304, 1326, 1368, 1423
DpnII GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
DraIII CACNNNGTG 1 cut(s) 1157
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
Eam1104I CTCTTC 2 cut(s) 41, 1056
EarI CTCTTC 2 cut(s) 41, 1056
Eco130I CCWWGG 2 cut(s) 400, 559
Eco24I GRGCYC 1 cut(s) 1418
Eco47I GGWCC 5 cut(s) 32, 181, 280, 1037, 1335
Eco57I CTGAAG 1 cut(s) 1127
Eco81I CCTNAGG 1 cut(s) 1314
Eco88I CYCGRG 1 cut(s) 1063
EcoNI CCTNNNNNAGG 1 cut(s) 645
EcoO109I RGGNCCY 3 cut(s) 32, 181, 1335
EcoRII CCWGG 2 cut(s) 640, 784
EcoT14I CCWWGG 2 cut(s) 400, 559
EcoT38I GRGCYC 1 cut(s) 1418
ErhI CCWWGG 2 cut(s) 400, 559
Esp3I CGTCTC 1 cut(s) 558
FaeI CATG 8 cut(s) 178, 404, 563, 607, 869, 1075, 1094, 1151
FaqI GGGAC 5 cut(s) 18, 665, 686, 887, 1348
FatI CATG 8 cut(s) 174, 400, 559, 603, 865, 1071, 1090, 1147
FauI CCCGC 3 cut(s) 209, 362, 912
Fnu4HI GCNGC 8 cut(s) 13, 220, 287, 290, 293, 382, 521, 841
FokI GGATG 4 cut(s) 145, 722, 1229, 1442
FriOI GRGCYC 1 cut(s) 1418
Fsp4HI GCNGC 8 cut(s) 13, 220, 287, 290, 293, 382, 521, 841
FspBI CTAG 4 cut(s) 23, 917, 1100, 1350
GlaI GCGC 2 cut(s) 385, 530
GluI GCNGC 8 cut(s) 13, 220, 287, 290, 293, 382, 521, 841
GsaI CCCAGC 1 cut(s) 277
GsuI CTGGAG 4 cut(s) 152, 453, 785, 846
HaeII RGCGCY 1 cut(s) 387
HaeIII GGCC 3 cut(s) 105, 162, 200
HapII CCGG 7 cut(s) 9, 124, 197, 253, 266, 366, 1196
HgaI GACGC 1 cut(s) 15
HhaI GCGC 2 cut(s) 386, 531
Hin1II CATG 8 cut(s) 178, 404, 563, 607, 869, 1075, 1094, 1151
Hin6I GCGC 2 cut(s) 384, 529
HinP1I GCGC 2 cut(s) 384, 529
HindIII AAGCTT 1 cut(s) 1118
HinfI GANTC 3 cut(s) 127, 815, 1244
HpaII CCGG 7 cut(s) 9, 124, 197, 253, 266, 366, 1196
HphI GGTGA 4 cut(s) 67, 253, 548, 778
Hpy188I TCNGA 4 cut(s) 132, 1249, 1329, 1342
Hpy99I CGWCG 3 cut(s) 31, 41, 236
HpyAV CCTTC 4 cut(s) 46, 757, 904, 1438
HpyCH4III ACNGT 3 cut(s) 569, 610, 1113
HpyCH4IV ACGT 4 cut(s) 240, 900, 1056, 1270
HpyCH4V TGCA 5 cut(s) 178, 442, 500, 1151, 1475
HpyF10VI GCNNNNNNNGC 9 cut(s) 149, 216, 283, 292, 298, 321, 517, 526, 986
HpyF3I CTNAG 4 cut(s) 870, 1188, 1314, 1357
HpySE526I ACGT 4 cut(s) 240, 900, 1056, 1270
Hsp92II CATG 8 cut(s) 178, 404, 563, 607, 869, 1075, 1094, 1151
HspAI GCGC 2 cut(s) 384, 529
KflI GGGWCCC 1 cut(s) 32
Kpn2I TCCGGA 2 cut(s) 252, 1195
KroI GCCGGC 1 cut(s) 365
KroNI GCCGGC 1 cut(s) 367
Kzo9I GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
LmnI GCTCC 2 cut(s) 508, 986
Lsp1109I GCAGC 4 cut(s) 273, 304, 532, 827
MaeI CTAG 4 cut(s) 23, 917, 1100, 1350
MaeII ACGT 4 cut(s) 240, 900, 1056, 1270
MaeIII GTNAC 2 cut(s) 1067, 1095
MalI GATC 6 cut(s) 892, 1239, 1304, 1326, 1368, 1423
MbiI CCGCTC 1 cut(s) 907
MboI GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
MboII GAAGA 4 cut(s) 58, 1043, 1115, 1220
MflI RGATCY 4 cut(s) 890, 1237, 1324, 1421
MhlI GDGCHC 1 cut(s) 1418
MluCI AATT 6 cut(s) 85, 424, 501, 774, 993, 1163
MmeI TCCRAC 1 cut(s) 687
MreI CGCCGGCG 1 cut(s) 365
MroI TCCGGA 2 cut(s) 252, 1195
MroNI GCCGGC 1 cut(s) 365
MseI TTAA 5 cut(s) 423, 516, 696, 780, 1320
MspA1I CMGCKG 2 cut(s) 286, 1439
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 7 cut(s) 9, 124, 197, 253, 266, 366, 1196
MspR9I CCNGG 4 cut(s) 197, 266, 642, 786
Mva1269I GAATGC 1 cut(s) 1351
MvaI CCWGG 2 cut(s) 642, 786
MvnI CGCG 4 cut(s) 204, 210, 531, 660
MwoI GCNNNNNNNGC 9 cut(s) 149, 216, 283, 292, 298, 321, 517, 526, 986
NaeI GCCGGC 1 cut(s) 367
NciI CCSGG 2 cut(s) 197, 266
NcoI CCATGG 2 cut(s) 400, 559
NdeII GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
NgoMIV GCCGGC 1 cut(s) 365
NlaIII CATG 8 cut(s) 178, 404, 563, 607, 869, 1075, 1094, 1151
NlaIV GGNNCC 4 cut(s) 33, 34, 1239, 1336
NruI TCGCGA 1 cut(s) 660
NspI RCATGY 2 cut(s) 178, 1151
PaeI GCATGC 1 cut(s) 1151
PagI TCATGA 1 cut(s) 603
PctI GAATGC 1 cut(s) 1351
PdiI GCCGGC 1 cut(s) 367
PfeI GAWTC 3 cut(s) 127, 815, 1244
PflFI GACNNNGTC 1 cut(s) 599
PkrI GCNGC 8 cut(s) 14, 221, 288, 291, 294, 383, 522, 842
Ppu21I YACGTR 1 cut(s) 241
PpuMI RGGWCCY 3 cut(s) 32, 181, 1335
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 3 cut(s) 32, 181, 1335
Psp6I CCWGG 2 cut(s) 640, 784
PspFI CCCAGC 1 cut(s) 273
PspGI CCWGG 2 cut(s) 640, 784
PspN4I GGNNCC 4 cut(s) 33, 34, 1239, 1336
PspPI GGNCC 7 cut(s) 32, 103, 181, 199, 280, 1037, 1335
PspPPI RGGWCCY 3 cut(s) 32, 181, 1335
PstI CTGCAG 1 cut(s) 1477
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 4 cut(s) 890, 1237, 1324, 1421
PsyI GACNNNGTC 1 cut(s) 599
PvuII CAGCTG 2 cut(s) 286, 1439
RruI TCGCGA 1 cut(s) 660
RsaI GTAC 2 cut(s) 344, 671
RsaNI GTAC 2 cut(s) 343, 670
SaqAI TTAA 5 cut(s) 423, 516, 696, 780, 1320
SatI GCNGC 8 cut(s) 13, 220, 287, 290, 293, 382, 521, 841
Sau3AI GATC 6 cut(s) 890, 1237, 1302, 1324, 1366, 1421
Sau96I GGNCC 7 cut(s) 32, 103, 181, 199, 280, 1037, 1335
ScrFI CCNGG 4 cut(s) 197, 266, 642, 786
SduI GDGCHC 1 cut(s) 1418
SfcI CTRYAG 1 cut(s) 1473
SgrAI CRCCGGYG 2 cut(s) 8, 365
SinI GGWCC 5 cut(s) 32, 181, 280, 1037, 1335
SmlI CTYRAG 2 cut(s) 296, 515
SmoI CTYRAG 2 cut(s) 296, 515
SphI GCATGC 1 cut(s) 1151
Sse9I AATT 6 cut(s) 85, 424, 501, 774, 993, 1163
SspMI CTAG 4 cut(s) 23, 917, 1100, 1350
StyD4I CCNGG 4 cut(s) 195, 264, 640, 784
StyI CCWWGG 2 cut(s) 400, 559
TaaI ACNGT 3 cut(s) 569, 610, 1113
TaiI ACGT 4 cut(s) 243, 903, 1059, 1273
TaqI TCGA 1 cut(s) 419
TaqII GACCGA 1 cut(s) 364
TasI AATT 6 cut(s) 85, 424, 501, 774, 993, 1163
TatI WGTACW 1 cut(s) 342
TauI GCSGC 4 cut(s) 15, 222, 292, 384
TfiI GAWTC 3 cut(s) 127, 815, 1244
Tru1I TTAA 5 cut(s) 423, 516, 696, 780, 1320
Tru9I TTAA 5 cut(s) 423, 516, 696, 780, 1320
TscAI CASTG 2 cut(s) 809, 1162
TseI GCWGC 4 cut(s) 286, 292, 520, 840
TspDTI ATGAA 5 cut(s) 128, 608, 1221, 1281, 1446
TspGWI ACGGA 1 cut(s) 687
TspRI CASTG 2 cut(s) 809, 1162
Tth111I GACNNNGTC 1 cut(s) 599
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 5 cut(s) 32, 181, 280, 1037, 1335
VspI ATTAAT 1 cut(s) 423
XagI CCTNNNNNAGG 1 cut(s) 645
XapI RAATTY 1 cut(s) 774
XceI RCATGY 2 cut(s) 178, 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 1230
XspI CTAG 4 cut(s) 23, 917, 1100, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.