MD05G1146000.v1.1

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0006237
Physical Location & Seq
Forward (+)
27696019 .. 27702316
6298 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1146000.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGGACACCGGCGGCAACTCTCTAGTGTCGGGTCCCGACGGAGTGAAGAGGAAGGTGAGCTATTTCTACGACCCAGAAGTGGGAAATTACTATTATGGGCAGGGACACCCGATGAAGCCCCACCGGATTCGGATGACCCACGCCCTCCTCGCGCACTATGGCCTCCTCCAGAACATGCAGGTCCTCAAACCCTACCCGGCCCGCGACCGCGACCTCTGTCGCTTCCACGCCGACGATTACGTGGCGTTCCTCCGGAACATCACCCCCGAAACGCAGCAGGACCAGCTGCGGCAGCTCAAGCGGTTCAATGTCGGCGAGGACTGCCCTGTCTTTGATGGGTTGTACTCGTTTTGCCAGACCTATGCTGGTGGGTCGGTCGGCGGCGCTGTGAAGCTCAACCATGGGATTTGTGATATTTCTATTAATTGGGCTGGTGGTTTGCACCATGCTAAGAAGTGTGAGGCTTCTGGATTTTGTTATGTGAATGACATTGTTCTTGCAATTTTGGAACTTCTTAAGCAGCATGAGCGCGTTTTGTATGTGGACATTGATATCCACCATGGAGATGGTGTTGAGGAGGCGTTTTACACGACTGACAGGGTCATGACGGTTTCATTTCACAAGTTTGGTGATTATTTTCCTGGCACGGGGGACATTCGTGATATTGGTTACGGGAAAGGGAAGTATTACTCCCTTAATGTTCCGTTGGATGATGGGATTGATGATGAGAGCTACCATTACTTGTTCAAGCCCATCATTGGGAAGGTGATGGAAATTTTTAAGCCTGGGGCTGTGGTTCTCCAGTGTGGTGCTGATTCCTTATCTGGGGACAGGCTTGGTTGCTTCAATCTTTCCATCAAAGGCCACGCCGAGTGTGTTAGGTATATGAGATCCTTCAATGTCCCGCTCTTGCTTCTAGGTGGCGGTGGCTATACCATTCGCAATGTTGCTCGTTGTTGGTGCTACGAGACAGGAGTAGCACTTGGAGCAGAAATTGAGGACAAAATGCCACAGCACGAGTATTATGAGTATTTCGGTCCAGATTATACTCTTCATGTTGCCCCAAGTAATATGGAAAATAAGAATTCTCACATGTTACTAGAAGAAATACGGTCAAAGCTTCTTGAAAACCTCTCCAGGCTGCAGCATGCACCCAGTGTCCAGTTTCAGGAAAGACCTCCTGATACTGAGCTTCCGGAGGAGAATGAGGAACAGGATGACCCAGACGAGAGGTGGGATCCAGATTCTGATATGGAGGTTGATGATGAACGTAAGCCTTTACCAAGCAGAGTAAAGAAAGAGATCGTTGAACCTGAAGTTAAGGATCCGAAAGGGACCTCGGAGAACGCTAGAAGCTCAGGCTATGATCCAGCGGTAGATGAGATAACAACAGGCGCAAAGGCTTTGGATATGGGATCTGGATCAGTGGATGAACCAACTGTGAAAGTTGAACAAGACACTATGAATAAGCCTGCGGACCAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0002376 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006476 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009405 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045087 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098542 GO:0098732 GO:0140096 GO:1901564 GO:1902459 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000036 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

496

Amino Acids

55.67

Weight (kDa)

5.02

Isoelectric Point (pI)

39.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 324 8.2e-88 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 326
Acc36I ACCTGC 1 cut(s) 169
AccBSI CCGCTC 1 cut(s) 907
AccII CGCG 4 cut(s) 152, 204, 210, 531
AccIII TCCGGA 2 cut(s) 252, 1195
AclWI GGATC 8 cut(s) 885, 1232, 1245, 1319, 1332, 1361, 1423, 1429
AcsI RAATTY 2 cut(s) 774, 1084
AcuI CTGAAG 1 cut(s) 1335
AdeI CACNNNGTG 1 cut(s) 1157
AfaI GTAC 1 cut(s) 344
AfiI CCNNNNNNNGG 7 cut(s) 79, 80, 647, 758, 759, 825, 1168
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 1092
AgsI TTSAA 7 cut(s) 307, 748, 847, 898, 1127, 1310, 1451
AjnI CCWGG 3 cut(s) 640, 784, 1136
AluBI AGCT 8 cut(s) 60, 286, 295, 394, 732, 1120, 1192, 1356
AluI AGCT 8 cut(s) 60, 286, 295, 394, 732, 1120, 1192, 1356
Alw26I GTCTC 1 cut(s) 962
AlwI GGATC 8 cut(s) 885, 1232, 1245, 1319, 1332, 1361, 1423, 1429
AlwNI CAGNNNCTG 1 cut(s) 1247
Aor13HI TCCGGA 2 cut(s) 252, 1195
AoxI GGCC 3 cut(s) 160, 198, 862
ApeKI GCWGC 6 cut(s) 274, 286, 292, 520, 1141, 1144
ApoI RAATTY 2 cut(s) 774, 1084
AseI ATTAAT 1 cut(s) 423
AspLEI GCGC 4 cut(s) 154, 386, 531, 1397
AspS9I GGNCC 7 cut(s) 32, 181, 199, 280, 1037, 1335, 1477
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 4 cut(s) 67, 253, 641, 778
AvaII GGWCC 6 cut(s) 32, 181, 280, 1037, 1335, 1477
BamHI GGATCC 2 cut(s) 1237, 1324
BauI CACGAG 1 cut(s) 1016
BbvI GCAGC 6 cut(s) 273, 286, 304, 532, 1128, 1156
BccI CCATC 6 cut(s) 329, 560, 707, 761, 763, 863
BciT130I CCWGG 3 cut(s) 642, 786, 1138
BcnI CCSGG 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 962
BfaI CTAG 4 cut(s) 23, 917, 1100, 1350
BfmI CTRYAG 1 cut(s) 1142
BfoI RGCGCY 1 cut(s) 387
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 9 cut(s) 13, 275, 287, 290, 293, 382, 521, 1142, 1145
BlsI GCNGC 9 cut(s) 14, 276, 288, 291, 294, 383, 522, 1143, 1146
Bme1390I CCNGG 4 cut(s) 197, 642, 786, 1138
Bme18I GGWCC 6 cut(s) 32, 181, 280, 1037, 1335, 1477
BmgT120I GGNCC 7 cut(s) 32, 181, 199, 280, 1037, 1335, 1477
BmiI GGNNCC 5 cut(s) 33, 34, 1239, 1326, 1336
BmrFI CCNGG 4 cut(s) 197, 642, 786, 1138
BmrI ACTGGG 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 1149
BoxI GACNNNNGTC 1 cut(s) 216
BpmI CTGGAG 3 cut(s) 152, 785, 1120
Bpu10I CCTNAGC 1 cut(s) 1357
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 1 cut(s) 197
BsaAI YACGTR 1 cut(s) 241
BsaBI GATNNNNATC 1 cut(s) 1420
BsaJI CCNNGG 4 cut(s) 400, 559, 785, 1338
BsaWI WCCGGW 3 cut(s) 123, 252, 1195
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 7 cut(s) 79, 80, 647, 758, 759, 825, 1168
Bse118I RCCGGY 1 cut(s) 8
Bse1I ACTGG 3 cut(s) 802, 1155, 1162
Bse3DI GCAATG 1 cut(s) 949
Bse8I GATNNNNATC 1 cut(s) 1420
BseAI TCCGGA 2 cut(s) 252, 1195
BseBI CCWGG 3 cut(s) 642, 786, 1138
BseDI CCNNGG 4 cut(s) 400, 559, 785, 1338
BseGI GGATG 4 cut(s) 138, 715, 1222, 1435
BseJI GATNNNNATC 1 cut(s) 1420
BseLI CCNNNNNNNGG 7 cut(s) 79, 80, 647, 758, 759, 825, 1168
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 2 cut(s) 1179, 1371
BseNI ACTGG 3 cut(s) 802, 1155, 1162
BseRI GAGGAG 4 cut(s) 137, 155, 590, 1214
BseXI GCAGC 6 cut(s) 273, 286, 304, 532, 1128, 1156
Bsh1236I CGCG 4 cut(s) 152, 204, 210, 531
Bsh1285I CGRYCG 2 cut(s) 208, 378
BshFI GGCC 3 cut(s) 162, 200, 864
BsiEI CGRYCG 2 cut(s) 208, 378
BsiSI CCGG 5 cut(s) 9, 124, 197, 253, 1196
BslFI GGGAC 6 cut(s) 18, 117, 665, 842, 887, 1348
BslI CCNNNNNNNGG 7 cut(s) 79, 80, 647, 758, 759, 825, 1168
BsmAI GTCTC 1 cut(s) 962
BsmFI GGGAC 6 cut(s) 18, 117, 665, 842, 887, 1348
BsnI GGCC 3 cut(s) 162, 200, 864
Bsp13I TCCGGA 2 cut(s) 252, 1195
Bsp143I GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
Bsp19I CCATGG 2 cut(s) 400, 559
BspANI GGCC 3 cut(s) 162, 200, 864
BspCNI CTCAG 2 cut(s) 1180, 1370
BspEI TCCGGA 2 cut(s) 252, 1195
BspFNI CGCG 4 cut(s) 152, 204, 210, 531
BspHI TCATGA 1 cut(s) 603
BspLI GGNNCC 5 cut(s) 33, 34, 1239, 1326, 1336
BspMAI CTGCAG 1 cut(s) 1146
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 8 cut(s) 885, 1232, 1245, 1319, 1332, 1361, 1423, 1429
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 907
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 1 cut(s) 8
BsrI ACTGG 3 cut(s) 802, 1155, 1162
BssAI RCCGGY 1 cut(s) 8
BssECI CCNNGG 4 cut(s) 400, 559, 785, 1338
BssMI GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
BssSI CACGAG 1 cut(s) 1016
BssT1I CCWWGG 2 cut(s) 400, 559
Bst2BI CACGAG 1 cut(s) 1016
Bst2UI CCWGG 3 cut(s) 642, 786, 1138
Bst4CI ACNGT 3 cut(s) 610, 1113, 1441
Bst6I CTCTTC 2 cut(s) 41, 1056
BstAFI CTTAAG 1 cut(s) 515
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 3 cut(s) 202, 1149, 1473
BstDEI CTNAG 3 cut(s) 450, 1188, 1357
BstDSI CCRYGG 2 cut(s) 400, 559
BstF5I GGATG 4 cut(s) 138, 715, 1222, 1435
BstFNI CGCG 4 cut(s) 152, 204, 210, 531
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 4 cut(s) 154, 386, 531, 1397
BstKTI GATC 7 cut(s) 893, 1240, 1305, 1327, 1369, 1418, 1424
BstMAI GTCTC 1 cut(s) 962
BstMBI GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
BstMCI CGRYCG 2 cut(s) 208, 378
BstMWI GCNNNNNNNGC 7 cut(s) 149, 283, 292, 298, 321, 526, 986
BstNI CCWGG 3 cut(s) 642, 786, 1138
BstNSI RCATGY 3 cut(s) 178, 1096, 1151
BstPAI GACNNNNGTC 1 cut(s) 216
BstSCI CCNGG 4 cut(s) 195, 640, 784, 1136
BstSFI CTRYAG 1 cut(s) 1142
BstUI CGCG 4 cut(s) 152, 204, 210, 531
BstV1I GCAGC 6 cut(s) 273, 286, 304, 532, 1128, 1156
BstX2I RGATCY 4 cut(s) 890, 1237, 1324, 1415
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 4 cut(s) 890, 1237, 1324, 1415
BsuRI GGCC 3 cut(s) 162, 200, 864
BtgI CCRYGG 2 cut(s) 400, 559
BtsCI GGATG 4 cut(s) 138, 715, 1222, 1435
BtsIMutI CAGTG 3 cut(s) 809, 1162, 1431
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 3 cut(s) 202, 1149, 1473
CaiI CAGNNNCTG 1 cut(s) 1247
CciI TCATGA 1 cut(s) 603
CfoI GCGC 4 cut(s) 154, 386, 531, 1397
Cfr10I RCCGGY 1 cut(s) 8
Cfr13I GGNCC 7 cut(s) 32, 181, 199, 280, 1037, 1335, 1477
Csp6I GTAC 1 cut(s) 343
CviAII CATG 9 cut(s) 175, 401, 446, 524, 560, 604, 1055, 1093, 1148
CviQI GTAC 1 cut(s) 343
DdeI CTNAG 3 cut(s) 450, 1188, 1357
DpnI GATC 7 cut(s) 892, 1239, 1304, 1326, 1368, 1417, 1423
DpnII GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
DraIII CACNNNGTG 1 cut(s) 1157
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
Eam1104I CTCTTC 2 cut(s) 41, 1056
EarI CTCTTC 2 cut(s) 41, 1056
Eco130I CCWWGG 2 cut(s) 400, 559
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 6 cut(s) 32, 181, 280, 1037, 1335, 1477
Eco57I CTGAAG 1 cut(s) 1335
EcoO109I RGGNCCY 3 cut(s) 32, 181, 1335
EcoRI GAATTC 1 cut(s) 1084
EcoRII CCWGG 3 cut(s) 640, 784, 1136
EcoRV GATATC 1 cut(s) 553
EcoT14I CCWWGG 2 cut(s) 400, 559
ErhI CCWWGG 2 cut(s) 400, 559
FaeI CATG 9 cut(s) 178, 404, 449, 527, 563, 607, 1058, 1096, 1151
FaqI GGGAC 6 cut(s) 18, 117, 665, 842, 887, 1348
FatI CATG 9 cut(s) 174, 400, 445, 523, 559, 603, 1054, 1092, 1147
FauI CCCGC 2 cut(s) 209, 912
Fnu4HI GCNGC 9 cut(s) 13, 275, 287, 290, 293, 382, 521, 1142, 1145
FokI GGATG 4 cut(s) 145, 722, 1229, 1442
Fsp4HI GCNGC 9 cut(s) 13, 275, 287, 290, 293, 382, 521, 1142, 1145
FspBI CTAG 4 cut(s) 23, 917, 1100, 1350
GlaI GCGC 4 cut(s) 153, 385, 530, 1396
GluI GCNGC 9 cut(s) 13, 275, 287, 290, 293, 382, 521, 1142, 1145
GsuI CTGGAG 3 cut(s) 152, 785, 1120
HaeII RGCGCY 1 cut(s) 387
HaeIII GGCC 3 cut(s) 162, 200, 864
HapII CCGG 5 cut(s) 9, 124, 197, 253, 1196
HhaI GCGC 4 cut(s) 154, 386, 531, 1397
Hin1II CATG 9 cut(s) 178, 404, 449, 527, 563, 607, 1058, 1096, 1151
Hin6I GCGC 4 cut(s) 152, 384, 529, 1395
HinP1I GCGC 4 cut(s) 152, 384, 529, 1395
HindIII AAGCTT 1 cut(s) 1118
HinfI GANTC 3 cut(s) 127, 815, 1244
HpaII CCGG 5 cut(s) 9, 124, 197, 253, 1196
HphI GGTGA 4 cut(s) 67, 253, 641, 778
Hpy166II GTNNAC 1 cut(s) 544
Hpy188I TCNGA 4 cut(s) 132, 1249, 1329, 1342
Hpy8I GTNNAC 1 cut(s) 544
Hpy99I CGWCG 2 cut(s) 41, 236
HpyAV CCTTC 3 cut(s) 46, 757, 904
HpyCH4III ACNGT 3 cut(s) 610, 1113, 1441
HpyCH4IV ACGT 2 cut(s) 240, 1270
HpyCH4V TGCA 5 cut(s) 178, 442, 500, 1144, 1151
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 283, 292, 298, 321, 526, 986
HpyF3I CTNAG 3 cut(s) 450, 1188, 1357
HpySE526I ACGT 2 cut(s) 240, 1270
Hsp92II CATG 9 cut(s) 178, 404, 449, 527, 563, 607, 1058, 1096, 1151
HspAI GCGC 4 cut(s) 152, 384, 529, 1395
KflI GGGWCCC 1 cut(s) 32
Kpn2I TCCGGA 2 cut(s) 252, 1195
Kzo9I GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
LmnI GCTCC 1 cut(s) 986
Lsp1109I GCAGC 6 cut(s) 273, 286, 304, 532, 1128, 1156
MaeI CTAG 4 cut(s) 23, 917, 1100, 1350
MaeII ACGT 2 cut(s) 240, 1270
MaeIII GTNAC 2 cut(s) 668, 1095
MalI GATC 7 cut(s) 892, 1239, 1304, 1326, 1368, 1417, 1423
MbiI CCGCTC 1 cut(s) 907
MboI GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
MboII GAAGA 3 cut(s) 58, 1043, 1115
MflI RGATCY 4 cut(s) 890, 1237, 1324, 1415
MluCI AATT 6 cut(s) 85, 424, 501, 774, 993, 1084
MmeI TCCRAC 1 cut(s) 687
MroI TCCGGA 2 cut(s) 252, 1195
MseI TTAA 5 cut(s) 423, 516, 696, 780, 1320
MslI CAYNNNNRTG 1 cut(s) 564
MspA1I CMGCKG 2 cut(s) 286, 1373
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 5 cut(s) 9, 124, 197, 253, 1196
MspR9I CCNGG 4 cut(s) 197, 642, 786, 1138
MvaI CCWGG 3 cut(s) 642, 786, 1138
MvnI CGCG 4 cut(s) 152, 204, 210, 531
MwoI GCNNNNNNNGC 7 cut(s) 149, 283, 292, 298, 321, 526, 986
NciI CCSGG 1 cut(s) 197
NcoI CCATGG 2 cut(s) 400, 559
NdeII GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
NlaIII CATG 9 cut(s) 178, 404, 449, 527, 563, 607, 1058, 1096, 1151
NlaIV GGNNCC 5 cut(s) 33, 34, 1239, 1326, 1336
NmeAIII GCCGAG 1 cut(s) 895
NspI RCATGY 3 cut(s) 178, 1096, 1151
PaeI GCATGC 1 cut(s) 1151
PagI TCATGA 1 cut(s) 603
PciI ACATGT 1 cut(s) 1092
PfeI GAWTC 3 cut(s) 127, 815, 1244
PflFI GACNNNGTC 1 cut(s) 599
PkrI GCNGC 9 cut(s) 14, 276, 288, 291, 294, 383, 522, 1143, 1146
Ppu21I YACGTR 1 cut(s) 241
PpuMI RGGWCCY 3 cut(s) 32, 181, 1335
PscI ACATGT 1 cut(s) 1092
PshAI GACNNNNGTC 1 cut(s) 216
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 3 cut(s) 32, 181, 1335
Psp6I CCWGG 3 cut(s) 640, 784, 1136
PspGI CCWGG 3 cut(s) 640, 784, 1136
PspN4I GGNNCC 5 cut(s) 33, 34, 1239, 1326, 1336
PspPI GGNCC 7 cut(s) 32, 181, 199, 280, 1037, 1335, 1477
PspPPI RGGWCCY 3 cut(s) 32, 181, 1335
PstI CTGCAG 1 cut(s) 1146
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 4 cut(s) 890, 1237, 1324, 1415
PsyI GACNNNGTC 1 cut(s) 599
PvuII CAGCTG 1 cut(s) 286
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
RseI CAYNNNNRTG 1 cut(s) 564
SaqAI TTAA 5 cut(s) 423, 516, 696, 780, 1320
SatI GCNGC 9 cut(s) 13, 275, 287, 290, 293, 382, 521, 1142, 1145
Sau3AI GATC 7 cut(s) 890, 1237, 1302, 1324, 1366, 1415, 1421
Sau96I GGNCC 7 cut(s) 32, 181, 199, 280, 1037, 1335, 1477
ScrFI CCNGG 4 cut(s) 197, 642, 786, 1138
SfcI CTRYAG 1 cut(s) 1142
SgrAI CRCCGGYG 1 cut(s) 8
SinI GGWCC 6 cut(s) 32, 181, 280, 1037, 1335, 1477
SmiMI CAYNNNNRTG 1 cut(s) 564
SmlI CTYRAG 2 cut(s) 296, 515
SmoI CTYRAG 2 cut(s) 296, 515
SphI GCATGC 1 cut(s) 1151
Sse9I AATT 6 cut(s) 85, 424, 501, 774, 993, 1084
SspMI CTAG 4 cut(s) 23, 917, 1100, 1350
StyD4I CCNGG 4 cut(s) 195, 640, 784, 1136
StyI CCWWGG 2 cut(s) 400, 559
TaaI ACNGT 3 cut(s) 610, 1113, 1441
TaiI ACGT 2 cut(s) 243, 1273
TaqII GACCGA 2 cut(s) 364, 1025
TasI AATT 6 cut(s) 85, 424, 501, 774, 993, 1084
TatI WGTACW 1 cut(s) 342
TauI GCSGC 3 cut(s) 15, 292, 384
TfiI GAWTC 3 cut(s) 127, 815, 1244
Tru1I TTAA 5 cut(s) 423, 516, 696, 780, 1320
Tru9I TTAA 5 cut(s) 423, 516, 696, 780, 1320
TscAI CASTG 3 cut(s) 809, 1162, 1431
TseI GCWGC 6 cut(s) 274, 286, 292, 520, 1141, 1144
TspDTI ATGAA 6 cut(s) 128, 603, 1043, 1281, 1446, 1478
TspGWI ACGGA 2 cut(s) 54, 693
TspRI CASTG 3 cut(s) 809, 1162, 1431
Tth111I GACNNNGTC 1 cut(s) 599
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 6 cut(s) 32, 181, 280, 1037, 1335, 1477
VspI ATTAAT 1 cut(s) 423
XapI RAATTY 2 cut(s) 774, 1084
XceI RCATGY 3 cut(s) 178, 1096, 1151
XcmI CCANNNNNNNNNTGG 3 cut(s) 362, 563, 1230
XspI CTAG 4 cut(s) 23, 917, 1100, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.