Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002842

Physical Location & Seq

Genomic Coordinates Reverse (-)

107547 .. 112324

Gene Structure 4778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G01270.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGAATCGTTTGGGTCATAAATCCGTGGTTTATCACGGAGATTTACGTTTGGGGGAACTTGATGTGAACCATGTATCTTCAAGTCATGAATTTCGATTCCCGAACGATGAGATTCGAATCCACCATCTATCTCCGGCTGGTGAGAGATGTCCTCCGCTCGCGATTCTTCAGACGATTGCTTCTTTTGCCGTTCGATGCAAGCTTGAGTCATCGGCTCCGGTGAAATCTCAAGAGTTAATGCATCTACACGCAGTCTGTTTCCATGAATTGAAGACTGCAGTGGTTATGCTCGGAGATGAGGAGATTCATTTAGTGGCGATGCCGAGTAAGGAGAAGAAGTTCCCGTGTTTTTGGTGTTTTTCGGTTCCTTCAGGTCTTTATGATTCGTGCTTAAGGATGCTTAATACTCGGTGTTTGTCTATTGTGTTTGATTTGGATGAGACTTTGATTGTTGCAAATACTATGAAGTCATTTGAGGATAGAATCGAGGCTCTTAAATCTTGGATTTCACGTGAGATGGATCCTGTGAGGATTAATGGGATGTCAGCAGAACTTAAAAGGTATATGGATGATAGGATGCTGCTGAAGCAGTATATTGATAATGACTATGCTTTTGATAACGGAGTTTTGTTAAAGGCTCAACCTGAGGAAGTCCGCCCAACTTCTGATGGACAAGAGAAAGTTTGTAGACCCGTGATTAGATTGCCGGAGAAGAATACTGTGCTTACTCGGATTAAGCCAGAGATCCGTGACACTAGTGTGCTTGTAAAACTGAGACCAGCATGGGAGGAGTTAAGAAGTTATTTGACAGCCAAAACTAGGAAACGTTTTGAAGTTTACGTTTGTACCATGGCTGAAAGGGATTATGCTCTGGAAATGTGGAGACTGCTTGATCCGGAAGCACACTTGATAAGTCTCAAGGAGCTTCGAGATCGTATCGTCTGCGTAAAACCAGACGCCAAGAAATCGTTGTTAAGTGTCTTCAATGGTGGCATTTGCCACCCGAAAATGGCAATGGTCATTGATGACCGTATGAAGGTTTGGGAGGACAAGGATCAACCACGGGTTCATGTTGTTTCTGCATATCTTCCTTATTATGCTCCACAAGCAGAGACAGCCCTTGTCGTTCCACATCTCTGCGTAGCAAGAAATGTTGCATGCAATGTCAGAGGTTACTTTTTCAAGGAATTTGATGAGAGTTTAATGAGTAGTATATCTTTGGTTTACTATGAAGATGATGTGGAAAATTTACCTCCATCACCGGATGTGAGCAACTACGTCGTTATAGAGGATCCTGGCTTTGCTTCAAATGGAAACATAAATGCTCCTCCAATTAACGAAGGAATGTGTGGGGGTGAAGTGGAACGAAGACTAAACCAAGCGGCTGCAGCTGATCATTCTACTCTTCCTGCAACAAGTAACGCTGAGCAGAAACCTGAAACCCCTAAGCCGCAGATAGCAGTTATACCAAATAATGCAAGCACGGCAACTGCAGCAGCACTGTTACCTTCTCATAAACCTAGTTTGCTTGGAGCTCCTAGGCGGGATGGCTTCACTTTTTCTGATGGTGGAAGACCCCTTATGATGAGGCCTGGTGTAGATATAAGGAACCAAAACTTTAATCAACCCCCCATTCTGGCTAAAATTCCTATGCAGCCACCTTCCTCGTCTATGCATTCTCCGGGTGGTTGGTTGGTAGATGATGAGAATAGACCTTCTTTTCCTGGTCGGCCTTCAGGACTTTATCCAAGTCAATTTCCTCATGGAACACCAGGTTCTGCTCCTGTTGGTCCATTTGCACATCCATCCCACTTGAGGAGTGAAGAGGTAGCAATGGATGATGACCTGAAAAGGCAAAATCCTTCACGTCAAACAACAGAAGGTGGAATATCCCAGAATCATTTGGTGTCAAATGGTAGAGAACATCATACAGATGGTGGAAAGAGTAATGGCGGGCAATCTCATTTATTTGTGAGTGCACTGCAAGAAATTGGAAGAAGATGTGGTTCAAAGGTGGAGTTTAGGACTGTGATAAGTACCAACAAAGAGTTACAGTTTTCAGTTGAGGTGTTGTTCACGGGTGAGAAGATAGGCATTGGGATGGCAAAAACTAAGAAAGATGCACATCAACAAGCGGCTGAGAATGCTCTTCGAAGTTTGGCTGAAAAGTATGTTGCACATGTGGCACCTCTAGCTAGAGAAACAGAGAAAGGTCCGGAAAATGATAATGGATTTTTGTGGGAAAGCAGTGAAGATGTATCAAACAAAGGACTTGAAGAGGAAGCGCCTAAAGAAAACATTTCAGAGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004647 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008420 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032870 GO:0032991 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070887 GO:0070940 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NIF dsrm

Protein Analysis

770

Amino Acids

85.95

Weight (kDa)

6.09

Isoelectric Point (pI)

52.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	243 - 356	3e-08	NLI interacting factor-like phosphatase
dsrm	PF00035	658 - 720	1.5e-10	Double-stranded RNA binding motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002842)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01270 AT5G01270
fragaria_vesca	FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640
malus_domestica	MD04G1150600.v1.1 MD04G1150700.v1.1 MD12G1164700.v1.1
prunus_persica	Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1
pyrus_communis	pycom04g13630 pycom12g15760
rosa_chinensis	RchiOBHm_Chr3g0463301
rosa_laevigata	RLG00000024792
rosa_multiflora	Rmu_co8080032.1_g000001 Rmu_sc0000923.1_g000001 Rmu_sc0002976.1_g000008 Rmu_sc0033161.1_g000001
rosa_roxburghii	Rroxscaffold_6G00416690
rosa_rugosa	Rorug03G0063700 Rorug03G0063700
rosa_samantha	Rh3AG121600 Rh3BG126100 Rh3CG128000 Rh3DG127200
rosa_wichuraiana	Rw3G010330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2185
AccBSI	CCGCTC	1 cut(s)	157
AccI	GTMKAC	1 cut(s)	688
AccII	CGCG	1 cut(s)	161
AccIII	TCCGGA	2 cut(s)	895, 2215
AciI	CCGC	7 cut(s)	155, 655, 1382, 1451, 1543, 1953, 2135
AclI	AACGTT	1 cut(s)	826
AclWI	GGATC	7 cut(s)	515, 528, 739, 887, 1062, 1286, 1299
AcsI	RAATTY	4 cut(s)	89, 1187, 1246, 1644
AcuI	CTGAAG	4 cut(s)	152, 354, 605, 1719
AcvI	CACGTG	1 cut(s)	512
AcyI	GRCGYC	1 cut(s)	957
AfaI	GTAC	2 cut(s)	847, 2038
AfiI	CCNNNNNNNGG	5 cut(s)	819, 1009, 1036, 1636, 1815
AflII	CTTAAG	1 cut(s)	391
AflIII	ACRYGT	1 cut(s)	2179
AgsI	TTSAA	8 cut(s)	81, 271, 833, 985, 1183, 1308, 2010, 2276
AhlI	ACTAGT	1 cut(s)	755
AjiI	CACGTC	1 cut(s)	1868
AjnI	CCWGG	4 cut(s)	1294, 1591, 1723, 1771
AleI	CACNNNNGTG	1 cut(s)	758
AloI	GAACNNNNNNTCC	2 cut(s)	323, 355
AluBI	AGCT	5 cut(s)	202, 925, 1391, 1535, 2195
AluI	AGCT	5 cut(s)	202, 925, 1391, 1535, 2195
Alw21I	GWGCWC	2 cut(s)	1537, 1981
Alw26I	GTCTC	5 cut(s)	434, 769, 877, 920, 1106
Alw44I	GTGCAC	1 cut(s)	1977
AlwI	GGATC	7 cut(s)	515, 528, 739, 887, 1062, 1286, 1299
AlwNI	CAGNNNCTG	1 cut(s)	1778
Aor13HI	TCCGGA	2 cut(s)	895, 2215
AoxI	GGCC	2 cut(s)	1589, 1730
ApaLI	GTGCAC	1 cut(s)	1977
ApeKI	GCWGC	6 cut(s)	580, 1385, 1388, 1493, 1496, 1654
ApoI	RAATTY	4 cut(s)	89, 1187, 1246, 1644
ArsI	GACNNNNNNTTYG	2 cut(s)	596, 628
AseI	ATTAAT	1 cut(s)	534
Asp700I	GAANNNNTTC	1 cut(s)	338
AspA2I	CCTAGG	1 cut(s)	1538
AspLEI	GCGC	1 cut(s)	2287
AspS9I	GGNCC	2 cut(s)	1790, 2213
AsuC2I	CCSGG	1 cut(s)	1683
AsuHPI	GGTGA	5 cut(s)	152, 232, 1251, 1367, 2093
AsuII	TTCGAA	2 cut(s)	115, 2152
AvaII	GGWCC	2 cut(s)	1790, 2213
AvrII	CCTAGG	1 cut(s)	1538
AxyI	CCTNAGG	1 cut(s)	645
BaeGI	GKGCMC	1 cut(s)	1981
BaeI	ACNNNNGTAYC	2 cut(s)	829, 862
BamHI	GGATCC	2 cut(s)	520, 1291
BanI	GGYRCC	1 cut(s)	2185
BanII	GRGCYC	1 cut(s)	1537
BbrPI	CACGTG	1 cut(s)	512
BbsI	GAAGAC	4 cut(s)	278, 973, 1375, 1579
Bbv12I	GWGCWC	2 cut(s)	1537, 1981
BbvI	GCAGC	6 cut(s)	567, 1372, 1400, 1505, 1508, 1666
BccI	CCATC	9 cut(s)	132, 511, 662, 1264, 1541, 1559, 1813, 1928, 2095
BceAI	ACGGC	2 cut(s)	173, 1500
BcgI	CGANNNNNNTGC	2 cut(s)	1261, 1295
BciT130I	CCWGG	4 cut(s)	1296, 1593, 1725, 1773
BclI	TGATCA	1 cut(s)	1393
BcnI	CCSGG	1 cut(s)	1683
BcoDI	GTCTC	5 cut(s)	434, 769, 877, 920, 1106
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	6 cut(s)	756, 819, 1521, 1539, 2192, 2196
BfmI	CTRYAG	3 cut(s)	276, 1386, 1491
BfoI	RGCGCY	1 cut(s)	2288
BfrI	CTTAAG	1 cut(s)	391
BisI	GCNGC	9 cut(s)	581, 1383, 1386, 1389, 1451, 1494, 1497, 1655, 2136
BlnI	CCTAGG	1 cut(s)	1538
BlpI	GCTNAGC	1 cut(s)	1425
BlsI	GCNGC	9 cut(s)	582, 1384, 1387, 1390, 1452, 1495, 1498, 1656, 2137
Bme1390I	CCNGG	5 cut(s)	1296, 1593, 1683, 1725, 1773
Bme18I	GGWCC	2 cut(s)	1790, 2213
BmgBI	CACGTC	1 cut(s)	1868
BmgT120I	GGNCC	2 cut(s)	1790, 2213
BmiI	GGNNCC	6 cut(s)	216, 366, 522, 1293, 1610, 2187
BmrFI	CCNGG	5 cut(s)	1296, 1593, 1683, 1725, 1773
BmsI	GCATC	6 cut(s)	185, 250, 309, 387, 567, 2110
BpiI	GAAGAC	4 cut(s)	278, 973, 1375, 1579
BplI	GAGNNNNNCTC	2 cut(s)	136, 168
Bpu10I	CCTNAGC	1 cut(s)	1446
Bpu1102I	GCTNAGC	1 cut(s)	1425
Bpu14I	TTCGAA	2 cut(s)	115, 2152
BpuEI	CTTGAG	4 cut(s)	213, 224, 902, 1834
BpuMI	CCSGG	1 cut(s)	1683
BsaAI	YACGTR	1 cut(s)	512
BsaBI	GATNNNNATC	2 cut(s)	116, 2124
BsaHI	GRCGYC	1 cut(s)	957
BsaI	GGTCTC	1 cut(s)	769
BsaJI	CCNNGG	4 cut(s)	24, 849, 1061, 1538
BsaWI	WCCGGW	4 cut(s)	217, 895, 1261, 2215
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	5 cut(s)	819, 1009, 1036, 1636, 1815
Bse21I	CCTNAGG	1 cut(s)	645
Bse3DI	GCAATG	3 cut(s)	1020, 1168, 1839
Bse8I	GATNNNNATC	2 cut(s)	116, 2124
BseAI	TCCGGA	2 cut(s)	895, 2215
BseBI	CCWGG	4 cut(s)	1296, 1593, 1725, 1773
BseDI	CCNNGG	4 cut(s)	24, 849, 1061, 1538
BseJI	GATNNNNATC	2 cut(s)	116, 2124
BseLI	CCNNNNNNNGG	5 cut(s)	819, 1009, 1036, 1636, 1815
BseMI	GCAATG	3 cut(s)	1020, 1168, 1839
BseMII	CTCAG	4 cut(s)	636, 764, 1416, 2130
BseRI	GAGGAG	4 cut(s)	314, 803, 1317, 1831
BseSI	GKGCMC	1 cut(s)	1981
BseXI	GCAGC	6 cut(s)	567, 1372, 1400, 1505, 1508, 1666
Bsh1236I	CGCG	1 cut(s)	161
BshFI	GGCC	2 cut(s)	1591, 1732
BshNI	GGYRCC	1 cut(s)	2185
BsiHKAI	GWGCWC	2 cut(s)	1537, 1981
BsiSI	CCGG	7 cut(s)	134, 218, 707, 896, 1262, 1682, 2216
BslI	CCNNNNNNNGG	5 cut(s)	819, 1009, 1036, 1636, 1815
BsmAI	GTCTC	5 cut(s)	434, 769, 877, 920, 1106
BsmI	GAATGC	2 cut(s)	1675, 2149
BsnI	GGCC	2 cut(s)	1591, 1732
Bso31I	GGTCTC	1 cut(s)	769
Bsp119I	TTCGAA	2 cut(s)	115, 2152
Bsp1286I	GDGCHC	2 cut(s)	1537, 1981
Bsp13I	TCCGGA	2 cut(s)	895, 2215
Bsp143I	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
Bsp1720I	GCTNAGC	1 cut(s)	1425
Bsp19I	CCATGG	1 cut(s)	849
Bsp68I	TCGCGA	1 cut(s)	161
BspACI	CCGC	7 cut(s)	155, 655, 1382, 1451, 1543, 1953, 2135
BspANI	GGCC	2 cut(s)	1591, 1732
BspCNI	CTCAG	4 cut(s)	637, 765, 1417, 2131
BspEI	TCCGGA	2 cut(s)	895, 2215
BspFNI	CGCG	1 cut(s)	161
BspHI	TCATGA	1 cut(s)	85
BspLI	GGNNCC	6 cut(s)	216, 366, 522, 1293, 1610, 2187
BspMAI	CTGCAG	3 cut(s)	280, 1390, 1495
BspPI	GGATC	7 cut(s)	515, 528, 739, 887, 1062, 1286, 1299
BspQI	GCTCTTC	1 cut(s)	2154
BspT104I	TTCGAA	2 cut(s)	115, 2152
BspT107I	GGYRCC	1 cut(s)	2185
BspTI	CTTAAG	1 cut(s)	391
BspTNI	GGTCTC	1 cut(s)	769
BsrBI	CCGCTC	1 cut(s)	157
BsrDI	GCAATG	3 cut(s)	1020, 1168, 1839
BssECI	CCNNGG	4 cut(s)	24, 849, 1061, 1538
BssMI	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
BssNI	GRCGYC	1 cut(s)	957
BssT1I	CCWWGG	2 cut(s)	849, 1538
Bst2UI	CCWGG	4 cut(s)	1296, 1593, 1725, 1773
Bst4CI	ACNGT	5 cut(s)	721, 1031, 1503, 2029, 2055
Bst6I	CTCTTC	4 cut(s)	1410, 1818, 2154, 2271
BstACI	GRCGYC	1 cut(s)	957
BstAFI	CTTAAG	1 cut(s)	391
BstBAI	YACGTR	1 cut(s)	512
BstBI	TTCGAA	2 cut(s)	115, 2152
BstC8I	GCNNGC	5 cut(s)	159, 200, 1159, 1480, 1955
BstDEI	CTNAG	6 cut(s)	645, 773, 1425, 1446, 2112, 2139
BstDSI	CCRYGG	3 cut(s)	24, 849, 1061
BstFNI	CGCG	1 cut(s)	161
BstH2I	RGCGCY	1 cut(s)	2288
BstHHI	GCGC	1 cut(s)	2287
BstKTI	GATC	7 cut(s)	523, 747, 895, 934, 1057, 1294, 1396
BstMAI	GTCTC	5 cut(s)	434, 769, 877, 920, 1106
BstMBI	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
BstNI	CCWGG	4 cut(s)	1296, 1593, 1725, 1773
BstNSI	RCATGY	2 cut(s)	1161, 2183
BstSCI	CCNGG	5 cut(s)	1294, 1591, 1681, 1723, 1771
BstSFI	CTRYAG	3 cut(s)	276, 1386, 1491
BstSLI	GKGCMC	1 cut(s)	1981
BstUI	CGCG	1 cut(s)	161
BstV1I	GCAGC	6 cut(s)	567, 1372, 1400, 1505, 1508, 1666
BstV2I	GAAGAC	4 cut(s)	278, 973, 1375, 1579
BstX2I	RGATCY	3 cut(s)	520, 744, 1291
BstYI	RGATCY	3 cut(s)	520, 744, 1291
Bsu36I	CCTNAGG	1 cut(s)	645
BsuRI	GGCC	2 cut(s)	1591, 1732
BtgI	CCRYGG	3 cut(s)	24, 849, 1061
BtgZI	GCGATG	1 cut(s)	332
BtrI	CACGTC	1 cut(s)	1868
BtsI	GCAGTG	3 cut(s)	285, 1979, 2254
BtsIMutI	CAGTG	4 cut(s)	285, 1499, 1979, 2254
BtuMI	TCGCGA	1 cut(s)	161
Cac8I	GCNNGC	5 cut(s)	159, 200, 1159, 1480, 1955
CaiI	CAGNNNCTG	1 cut(s)	1778
CciI	TCATGA	1 cut(s)	85
CfoI	GCGC	1 cut(s)	2287
Cfr13I	GGNCC	2 cut(s)	1790, 2213
CseI	GACGC	1 cut(s)	965
CsiI	ACCWGGT	1 cut(s)	1771
Csp6I	GTAC	2 cut(s)	846, 2037
CviAII	CATG	9 cut(s)	71, 86, 263, 783, 850, 1070, 1158, 1763, 2180
CviQI	GTAC	2 cut(s)	846, 2037
DdeI	CTNAG	6 cut(s)	645, 773, 1425, 1446, 2112, 2139
DpnI	GATC	7 cut(s)	522, 746, 894, 933, 1056, 1293, 1395
DpnII	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
Eam1104I	CTCTTC	4 cut(s)	1410, 1818, 2154, 2271
EarI	CTCTTC	4 cut(s)	1410, 1818, 2154, 2271
EciI	GGCGGA	1 cut(s)	644
Ecl136II	GAGCTC	1 cut(s)	1535
Eco130I	CCWWGG	2 cut(s)	849, 1538
Eco147I	AGGCCT	1 cut(s)	1591
Eco24I	GRGCYC	1 cut(s)	1537
Eco31I	GGTCTC	1 cut(s)	769
Eco47I	GGWCC	2 cut(s)	1790, 2213
Eco53kI	GAGCTC	1 cut(s)	1535
Eco57I	CTGAAG	4 cut(s)	152, 354, 605, 1719
Eco72I	CACGTG	1 cut(s)	512
Eco81I	CCTNAGG	1 cut(s)	645
EcoICRI	GAGCTC	1 cut(s)	1535
EcoRII	CCWGG	4 cut(s)	1294, 1591, 1723, 1771
EcoT14I	CCWWGG	2 cut(s)	849, 1538
EcoT22I	ATGCAT	2 cut(s)	243, 1677
EcoT38I	GRGCYC	1 cut(s)	1537
ErhI	CCWWGG	2 cut(s)	849, 1538
FaeI	CATG	9 cut(s)	74, 89, 266, 786, 853, 1073, 1161, 1766, 2183
FatI	CATG	9 cut(s)	70, 85, 262, 782, 849, 1069, 1157, 1762, 2179
FauI	CCCGC	2 cut(s)	1536, 1946
FbaI	TGATCA	1 cut(s)	1393
FblI	GTMKAC	1 cut(s)	688
Fnu4HI	GCNGC	9 cut(s)	581, 1383, 1386, 1389, 1451, 1494, 1497, 1655, 2136
FriOI	GRGCYC	1 cut(s)	1537
Fsp4HI	GCNGC	9 cut(s)	581, 1383, 1386, 1389, 1451, 1494, 1497, 1655, 2136
FspBI	CTAG	6 cut(s)	756, 819, 1521, 1539, 2192, 2196
GlaI	GCGC	1 cut(s)	2286
GluI	GCNGC	9 cut(s)	581, 1383, 1386, 1389, 1451, 1494, 1497, 1655, 2136
HaeII	RGCGCY	1 cut(s)	2288
HaeIII	GGCC	2 cut(s)	1591, 1732
HapII	CCGG	7 cut(s)	134, 218, 707, 896, 1262, 1682, 2216
HgaI	GACGC	1 cut(s)	965
HhaI	GCGC	1 cut(s)	2287
Hin1I	GRCGYC	1 cut(s)	957
Hin1II	CATG	9 cut(s)	74, 89, 266, 786, 853, 1073, 1161, 1766, 2183
Hin6I	GCGC	1 cut(s)	2285
HinP1I	GCGC	1 cut(s)	2285
HindIII	AAGCTT	1 cut(s)	200
HpaII	CCGG	7 cut(s)	134, 218, 707, 896, 1262, 1682, 2216
HphI	GGTGA	5 cut(s)	152, 232, 1251, 1367, 2093
Hpy166II	GTNNAC	6 cut(s)	67, 689, 838, 1225, 1979, 2076
Hpy188I	TCNGA	7 cut(s)	171, 293, 667, 732, 1169, 1564, 2305
Hpy188III	TCNNGA	9 cut(s)	86, 100, 160, 230, 872, 896, 929, 1737, 2216
Hpy8I	GTNNAC	6 cut(s)	67, 689, 838, 1225, 1979, 2076
Hpy99I	CGWCG	1 cut(s)	1283
HpyAV	CCTTC	9 cut(s)	378, 1030, 1334, 1518, 1671, 1725, 1743, 1872, 1874
HpyCH4III	ACNGT	5 cut(s)	721, 1031, 1503, 2029, 2055
HpyCH4IV	ACGT	6 cut(s)	46, 511, 826, 840, 1278, 1867
HpyF3I	CTNAG	6 cut(s)	645, 773, 1425, 1446, 2112, 2139
HpySE526I	ACGT	6 cut(s)	46, 511, 826, 840, 1278, 1867
Hsp92I	GRCGYC	1 cut(s)	957
Hsp92II	CATG	9 cut(s)	74, 89, 266, 786, 853, 1073, 1161, 1766, 2183
HspAI	GCGC	1 cut(s)	2285
Kpn2I	TCCGGA	2 cut(s)	895, 2215
Ksp22I	TGATCA	1 cut(s)	1393
Kzo9I	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
LguI	GCTCTTC	1 cut(s)	2154
LmnI	GCTCC	7 cut(s)	220, 922, 1105, 1330, 1532, 1540, 1786
Lsp1109I	GCAGC	6 cut(s)	567, 1372, 1400, 1505, 1508, 1666
LweI	GCATC	6 cut(s)	185, 250, 309, 387, 567, 2110
MabI	ACCWGGT	1 cut(s)	1771
MaeI	CTAG	6 cut(s)	756, 819, 1521, 1539, 2192, 2196
MaeII	ACGT	6 cut(s)	46, 511, 826, 840, 1278, 1867
MaeIII	GTNAC	5 cut(s)	749, 1172, 1418, 1503, 2049
MalI	GATC	7 cut(s)	522, 746, 894, 933, 1056, 1293, 1395
MbiI	CCGCTC	1 cut(s)	157
MboI	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
MflI	RGATCY	3 cut(s)	520, 744, 1291
MhlI	GDGCHC	2 cut(s)	1537, 1981
MluCI	AATT	8 cut(s)	89, 266, 1187, 1246, 1332, 1644, 1754, 1989
MlyI	GAGTC	1 cut(s)	215
Mph1103I	ATGCAT	2 cut(s)	243, 1677
MroI	TCCGGA	2 cut(s)	895, 2215
MroXI	GAANNNNTTC	1 cut(s)	338
MslI	CAYNNNNRTG	3 cut(s)	758, 1932, 2099
MspA1I	CMGCKG	1 cut(s)	1391
MspCI	CTTAAG	1 cut(s)	391
MspI	CCGG	7 cut(s)	134, 218, 707, 896, 1262, 1682, 2216
MspR9I	CCNGG	5 cut(s)	1296, 1593, 1683, 1725, 1773
Mva1269I	GAATGC	2 cut(s)	1675, 2149
MvaI	CCWGG	4 cut(s)	1296, 1593, 1725, 1773
MvnI	CGCG	1 cut(s)	161
NciI	CCSGG	1 cut(s)	1683
NcoI	CCATGG	1 cut(s)	849
NdeII	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
NlaIII	CATG	9 cut(s)	74, 89, 266, 786, 853, 1073, 1161, 1766, 2183
NlaIV	GGNNCC	6 cut(s)	216, 366, 522, 1293, 1610, 2187
NmeAIII	GCCGAG	1 cut(s)	348
NmuCI	GTSAC	1 cut(s)	749
NruI	TCGCGA	1 cut(s)	161
NsiI	ATGCAT	2 cut(s)	243, 1677
NspI	RCATGY	2 cut(s)	1161, 2183
NspV	TTCGAA	2 cut(s)	115, 2152
OliI	CACNNNNGTG	1 cut(s)	758
PaeI	GCATGC	1 cut(s)	1161
PagI	TCATGA	1 cut(s)	85
PceI	AGGCCT	1 cut(s)	1591
PciI	ACATGT	1 cut(s)	2179
PciSI	GCTCTTC	1 cut(s)	2154
PctI	GAATGC	2 cut(s)	1675, 2149
PdmI	GAANNNNTTC	1 cut(s)	338
PfeI	GAWTC	9 cut(s)	4, 96, 112, 117, 163, 304, 383, 483, 1897
PkrI	GCNGC	9 cut(s)	582, 1384, 1387, 1390, 1452, 1495, 1498, 1656, 2137
PleI	GAGTC	1 cut(s)	214
PmaCI	CACGTG	1 cut(s)	512
PmlI	CACGTG	1 cut(s)	512
PpsI	GAGTC	1 cut(s)	214
Ppu21I	YACGTR	1 cut(s)	512
PscI	ACATGT	1 cut(s)	2179
PshBI	ATTAAT	1 cut(s)	534
Psp124BI	GAGCTC	1 cut(s)	1537
Psp1406I	AACGTT	1 cut(s)	826
Psp6I	CCWGG	4 cut(s)	1294, 1591, 1723, 1771
PspCI	CACGTG	1 cut(s)	512
PspGI	CCWGG	4 cut(s)	1294, 1591, 1723, 1771
PspN4I	GGNNCC	6 cut(s)	216, 366, 522, 1293, 1610, 2187
PspPI	GGNCC	2 cut(s)	1790, 2213
PstI	CTGCAG	3 cut(s)	280, 1390, 1495
PstNI	CAGNNNCTG	1 cut(s)	1778
PsuI	RGATCY	3 cut(s)	520, 744, 1291
PvuII	CAGCTG	1 cut(s)	1391
RruI	TCGCGA	1 cut(s)	161
RsaI	GTAC	2 cut(s)	847, 2038
RsaNI	GTAC	2 cut(s)	846, 2037
RseI	CAYNNNNRTG	3 cut(s)	758, 1932, 2099
SacI	GAGCTC	1 cut(s)	1537
SapI	GCTCTTC	1 cut(s)	2154
SatI	GCNGC	9 cut(s)	581, 1383, 1386, 1389, 1451, 1494, 1497, 1655, 2136
Sau3AI	GATC	7 cut(s)	520, 744, 892, 931, 1054, 1291, 1393
Sau96I	GGNCC	2 cut(s)	1790, 2213
SchI	GAGTC	1 cut(s)	215
ScrFI	CCNGG	5 cut(s)	1296, 1593, 1683, 1725, 1773
SduI	GDGCHC	2 cut(s)	1537, 1981
SexAI	ACCWGGT	1 cut(s)	1771
SfaNI	GCATC	6 cut(s)	185, 250, 309, 387, 567, 2110
SfcI	CTRYAG	3 cut(s)	276, 1386, 1491
SfuI	TTCGAA	2 cut(s)	115, 2152
SinI	GGWCC	2 cut(s)	1790, 2213
SmiMI	CAYNNNNRTG	3 cut(s)	758, 1932, 2099
SmlI	CTYRAG	5 cut(s)	203, 228, 391, 917, 1813
SmoI	CTYRAG	5 cut(s)	203, 228, 391, 917, 1813
SpeI	ACTAGT	1 cut(s)	755
SphI	GCATGC	1 cut(s)	1161
Sse9I	AATT	8 cut(s)	89, 266, 1187, 1246, 1332, 1644, 1754, 1989
SseBI	AGGCCT	1 cut(s)	1591
SsiI	CCGC	7 cut(s)	155, 655, 1382, 1451, 1543, 1953, 2135
SspMI	CTAG	6 cut(s)	756, 819, 1521, 1539, 2192, 2196
SstI	GAGCTC	1 cut(s)	1537
StuI	AGGCCT	1 cut(s)	1591
StyD4I	CCNGG	5 cut(s)	1294, 1591, 1681, 1723, 1771
StyI	CCWWGG	2 cut(s)	849, 1538
TaaI	ACNGT	5 cut(s)	721, 1031, 1503, 2029, 2055
TaiI	ACGT	6 cut(s)	49, 514, 829, 843, 1281, 1870
TaqI	TCGA	6 cut(s)	94, 115, 193, 486, 928, 2152
TasI	AATT	8 cut(s)	89, 266, 1187, 1246, 1332, 1644, 1754, 1989
TauI	GCSGC	3 cut(s)	1385, 1453, 2138
TfiI	GAWTC	9 cut(s)	4, 96, 112, 117, 163, 304, 383, 483, 1897
TscAI	CASTG	4 cut(s)	285, 1506, 1986, 2254
TseFI	GTSAC	1 cut(s)	749
TseI	GCWGC	6 cut(s)	580, 1385, 1388, 1493, 1496, 1654
Tsp45I	GTSAC	1 cut(s)	749
TspDTI	ATGAA	8 cut(s)	17, 102, 279, 296, 479, 1049, 1058, 1245
TspGWI	ACGGA	4 cut(s)	13, 51, 636, 737
TspRI	CASTG	4 cut(s)	285, 1506, 1986, 2254
Vha464I	CTTAAG	1 cut(s)	391
VneI	GTGCAC	1 cut(s)	1977
VpaK11BI	GGWCC	2 cut(s)	1790, 2213
VspI	ATTAAT	1 cut(s)	534
XapI	RAATTY	4 cut(s)	89, 1187, 1246, 1644
XceI	RCATGY	2 cut(s)	1161, 2183
XmaJI	CCTAGG	1 cut(s)	1538
XmiI	GTMKAC	1 cut(s)	688
XmnI	GAANNNNTTC	1 cut(s)	338
XspI	CTAG	6 cut(s)	756, 819, 1521, 1539, 2192, 2196
Zsp2I	ATGCAT	2 cut(s)	243, 1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.