RLG00000024792

RNA polymerase II C-terminal domain phosphatase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
39156960 .. 39163079
6120 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024792

Sequence Viewer

Length: 2547 bp
ATGAGCAGTTTAGGGTTTAGGTCCGTGGTCTATCACGGCGAGCTGTGCTTGGGTGAGCTCGACGCTATTCCGGTGACGGAGGGGAAATTTCAGTTCCCGAACAACGAGATTCGAATCCACCACATATCGCAGCAAAGTGAACGCTGTCCACCCCTCTCAGTTCTTCAAACGATTTCCTCATTTTCGGTTAGATGCAAGCTCGAATCGGCCACCCCTGTTGAACAGCCTCATTTGATCAACCTCCACGCCTCGTGTTTCTACGAGCTCAAGACGGCGGTAGTGTTGATTGGGAATGAAGAGATTCACTTGGTGGCAATGCCAAGTAAGCAGAAAAAGTTTCCGTGCTTTTGGTGCTATTCGGTTCCTTTAGGTCTGTATAGTGCTTCTCTTGGAATGCTGAATCCAAGGTGTCTCTCAATTGTATTTGATCTCGACGAGACTCTAATTGTTGCCAACACAATGAAGTCGTTTGAGGATAGAATTGAGGCTTTACGAAGCTGGATTGCACGAGAGAGTGAAACGTTGCGCATAGCTGGAATGTCTAATGAAATGAAACGTTACATTGACGATAGGTGGTTGTTGAGGCAATATATAGATAATGATTGTGTGGTGGATAACGGACAGGTGTATAAGATTCAAATGGAGGAGGTTCCTCCACTGTCAGGTAGCCACGAGAGAATCCTTCGGCCGATCGTTAGATTGCCAGATAAGAACATTGTGCTCACTCGCATCAATCCCGAGGTTCGTGATACAAGTGTGCTGGTCAGGTTACGGCCTGCATGGGAAGATCTGAGAAGTTATTTAACAGCAAAAGGACGCAAGCGGTTTGAAGTTCATGTCTGTACGATGGCTGAAAGGGACTATGCATTAGAAATGTGGAGGCTTCTAGACCCAGAAGGACAACTAATAGGTTCAAAGCAACTTCTTGACCGTGTTGTTTGTGTCAAATCAGGTTCGCGGAAATCTTTACTCAATGTCTTCCAACTTGGAACGTGCCATCCAAAGATGGCCATGGTTATTGATGATCGTTCAAAGGTCTGGGAAGATAAGGATCAACCTCGAGTTCATGTAGTTCCAGCTTTTACTCCTTACTATGCTCCTCAAGCAGAGACAGCAAATGCCGTTCCTGTCCTCTGTGTAGCAAGAAATGTTGCATGCAATGTCAGGGGCTGCTTTTTTAAAGAGTTCGATGAGATTTTCTTGCGAAGAATTTCTGAAGTTTTTTATGAAGATGAGGTGGTAAATTTACCTCCTTCTCCTGATGTGAGCAATTACTTGATATCGGAGGATGCTGGTTTTGTACCAAATGGAATTGCTCCCCTTAGTGAAGGAATGCATGGTGGTGAAGTTGAACGGAGATTGAACCAACCTGATGATAAGGGTGTTATGGACTCAATGGCTTATCCTAATCATGCTGAGTTAAGACCTGACAACTCCCAGAAACCTATAGCAACTGTCCTCAATGTCCCTGGTGCAACATCTTTGAGACTGGTCATGCCTACTCAGAAACCTAGTTTGCTTGGACCTCTTGTTAGACGAGACAGCTTTTCTGATCGTGATAATAACATGAAGAGAGGACTTCTTGGTACAAATCCTTGCCTAGATATAAGGAGTCAAAGCTCTGGTGAACCCCCATATTCATCTAGAGTACCTGCACAAACTTCAGCATCCATAGTACATGCACAAGGAGGATGGTTAGTGGATGATGACAAGAAAAGAGGACATTTAAGTTTTCGACCTCCTGGTTCTGGTCAAGAGTCTGATGTCTTAAAACCTGAGAAGCTGGTCCACCAGAATCCGTTTAGTCTTAATAAACAGTCTGCTCTGACTGGTTTACCCTCACAGACATCTGAGGCAAGGAGGGAAGAGGTTAGCTCTGGACATGATTTCCCAAAGCAAAATCTTCCTTTTCCAAGTGTGTTATCAGAGGCTGGTGTGTCTCAGAATCAGGCATCTTCTTTTAAAAAAGAATCTGGAAAAGTGAACGCGCTGCCGTCCCCTTTATCTATTGGTGTGCTGCAGGAAATCGGACGGAGATGCGGCTCAAAGGTTGAATTTAAGGCTGTTATAAGCACCAGTAACGATTTGCAGTTTTCTTTTGAGGTGCTCTTCACGGGGGAGAAGATAGGTTTTGGAACAGGAAGGACAAGAAAGGATGCTCAACAACAGGCTGCTGAGAATGCACTTCACAGCTTGGCTGAAAAATATGTCTCATATATTGCACCGCAATCTGGAGCAGTGGACAAAGATTTTGATAAACTCTCTCTTGGAAATGAAAACGGATTTGTTTTGGACATAGTTGGTCCAGGATCAGCTGAGGGGCTAACGGAAGATGGATTGCCAAAAGAAAGTACTTCTGAGGCTTCTGAAGGTGAGCCTGGGAGCTTTTCTACTGTGGCGAGTCAGCAAGTTCAAAAGCGTGCCAATTCCCCAAGGTTGCTACAGTCTGTTTCGAATAAACGATCGAAGGAAGAACTAGCAGGTGGTCCACGAAACCTATCATATTCTCGACTGAGGAAGGGCCCTAAAGACAAACCTCAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

849

Amino Acids

94.17

Weight (kDa)

6.66

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NIF PF03031 245 - 356 1e-07 NLI interacting factor-like phosphatase
dsrm PF00035 670 - 732 2.4e-08 Double-stranded RNA binding motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2069
AarI CACCTGC 1 cut(s) 2471
Acc16I TGCGCA 1 cut(s) 527
Acc36I ACCTGC 2 cut(s) 1660, 2471
AccII CGCG 2 cut(s) 958, 1988
AciI CCGC 5 cut(s) 275, 823, 958, 2040, 2225
AclI AACGTT 2 cut(s) 521, 556
AclWI GGATC 2 cut(s) 1059, 2317
AcoI YGGCCR 3 cut(s) 207, 686, 1008
AcsI RAATTY 4 cut(s) 86, 1209, 1243, 2054
AcuI CTGAAG 3 cut(s) 1236, 1647, 2388
AdeI CACNNNGTG 1 cut(s) 310
AfaI GTAC 6 cut(s) 844, 1302, 1588, 1650, 1677, 2353
AfiI CCNNNNNNNGG 3 cut(s) 662, 1748, 2231
AjnI CCWGG 4 cut(s) 1468, 1741, 2305, 2377
AloI GAACNNNNNNTCC 2 cut(s) 982, 1014
Alw21I GWGCWC 4 cut(s) 60, 267, 723, 2109
Alw26I GTCTC 7 cut(s) 416, 431, 1103, 1480, 1533, 1944, 2215
AlwI GGATC 2 cut(s) 1059, 2317
AlwNI CAGNNNCTG 2 cut(s) 1170, 1931
Ama87I CYCGRG 2 cut(s) 737, 1059
AoxI GGCC 5 cut(s) 207, 686, 773, 1008, 2521
ApaI GGGCCC 1 cut(s) 2525
ApeKI GCWGC 5 cut(s) 130, 1170, 1990, 2017, 2171
ApoI RAATTY 4 cut(s) 86, 1209, 1243, 2054
ArsI GACNNNNNNTTYG 2 cut(s) 2234, 2266
Asp700I GAANNNNTTC 2 cut(s) 300, 1210
AspLEI GCGC 2 cut(s) 528, 1990
AspS9I GGNCC 7 cut(s) 21, 1523, 1786, 2303, 2486, 2521, 2522
AsuHPI GGTGA 5 cut(s) 65, 85, 1355, 1637, 2384
AsuII TTCGAA 2 cut(s) 112, 2453
AvaI CYCGRG 2 cut(s) 737, 1059
AvaII GGWCC 5 cut(s) 21, 1523, 1786, 2303, 2486
AxyI CCTNAGG 1 cut(s) 2538
BaeGI GKGCMC 1 cut(s) 2525
BaeI ACNNNNGTAYC 2 cut(s) 741, 774
BalI TGGCCA 1 cut(s) 1010
BanII GRGCYC 3 cut(s) 60, 267, 2525
BauI CACGAG 3 cut(s) 250, 507, 671
BbsI GAAGAC 1 cut(s) 970
Bbv12I GWGCWC 4 cut(s) 60, 267, 723, 2109
BbvCI CCTCAGC 1 cut(s) 2316
BbvI GCAGC 5 cut(s) 142, 1157, 1977, 2004, 2158
BccI CCATC 5 cut(s) 841, 1000, 1005, 1686, 2327
BceAI ACGGC 5 cut(s) 52, 288, 788, 1106, 1978
BciT130I CCWGG 4 cut(s) 1470, 1743, 2307, 2379
BclI TGATCA 1 cut(s) 234
BcoDI GTCTC 7 cut(s) 416, 431, 1103, 1480, 1533, 1944, 2215
BfaI CTAG 5 cut(s) 887, 1512, 1601, 1644, 2477
BfmI CTRYAG 3 cut(s) 1446, 2018, 2441
BfuAI ACCTGC 2 cut(s) 1660, 2471
BglII AGATCT 1 cut(s) 787
BisI GCNGC 6 cut(s) 131, 1171, 1991, 2018, 2041, 2172
BlsI GCNGC 6 cut(s) 132, 1172, 1992, 2019, 2042, 2173
BmcAI AGTACT 1 cut(s) 2353
Bme1390I CCNGG 4 cut(s) 1470, 1743, 2307, 2379
Bme18I GGWCC 5 cut(s) 21, 1523, 1786, 2303, 2486
BmeT110I CYCGRG 2 cut(s) 737, 1059
BmgT120I GGNCC 7 cut(s) 21, 1523, 1786, 2303, 2486, 2521, 2522
BmiI GGNNCC 3 cut(s) 363, 651, 2523
BmrFI CCNGG 4 cut(s) 1470, 1743, 2307, 2379
BmsI GCATC 7 cut(s) 182, 738, 1279, 1676, 1961, 2027, 2146
BpiI GAAGAC 1 cut(s) 970
BplI GAGNNNNNCTC 2 cut(s) 1859, 1891
BpmI CTGGAG 1 cut(s) 2253
Bpu10I CCTNAGC 1 cut(s) 2316
Bpu14I TTCGAA 2 cut(s) 112, 2453
BpuEI CTTGAG 2 cut(s) 251, 1086
BsaBI GATNNNNATC 2 cut(s) 113, 1050
BsaJI CCNNGG 7 cut(s) 24, 404, 738, 1011, 1468, 2378, 2432
BsaWI WCCGGW 1 cut(s) 70
Bsc4I CCNNNNNNNGG 3 cut(s) 662, 1748, 2231
Bse1I ACTGG 3 cut(s) 1494, 1834, 2076
Bse21I CCTNAGG 1 cut(s) 2538
Bse3DI GCAATG 2 cut(s) 321, 1165
Bse8I GATNNNNATC 2 cut(s) 113, 1050
BseBI CCWGG 4 cut(s) 1470, 1743, 2307, 2379
BseDI CCNNGG 7 cut(s) 24, 404, 738, 1011, 1468, 2378, 2432
BseGI GGATG 6 cut(s) 997, 1294, 1667, 1697, 1708, 2161
BseJI GATNNNNATC 2 cut(s) 113, 1050
BseLI CCNNNNNNNGG 3 cut(s) 662, 1748, 2231
BseMI GCAATG 2 cut(s) 321, 1165
BseNI ACTGG 3 cut(s) 1494, 1834, 2076
BseRI GAGGAG 2 cut(s) 659, 1089
BseSI GKGCMC 1 cut(s) 2525
BseX3I CGGCCG 1 cut(s) 686
BseXI GCAGC 5 cut(s) 142, 1157, 1977, 2004, 2158
BsgI GTGCAG 1 cut(s) 1638
Bsh1236I CGCG 2 cut(s) 958, 1988
Bsh1285I CGRYCG 3 cut(s) 689, 693, 2465
BshFI GGCC 5 cut(s) 209, 688, 775, 1010, 2523
BsiEI CGRYCG 3 cut(s) 689, 693, 2465
BsiHKAI GWGCWC 4 cut(s) 60, 267, 723, 2109
BsiHKCI CYCGRG 2 cut(s) 737, 1059
BsiSI CCGG 1 cut(s) 71
BslFI GGGAC 3 cut(s) 872, 1451, 1981
BslI CCNNNNNNNGG 3 cut(s) 662, 1748, 2231
BsmAI GTCTC 7 cut(s) 416, 431, 1103, 1480, 1533, 1944, 2215
BsmFI GGGAC 3 cut(s) 872, 1451, 1981
BsmI GAATGC 3 cut(s) 399, 1338, 2185
BsnI GGCC 5 cut(s) 209, 688, 775, 1010, 2523
BsoBI CYCGRG 2 cut(s) 737, 1059
Bsp119I TTCGAA 2 cut(s) 112, 2453
Bsp120I GGGCCC 1 cut(s) 2521
Bsp1286I GDGCHC 5 cut(s) 60, 267, 723, 2109, 2525
Bsp143I GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
Bsp19I CCATGG 1 cut(s) 1011
BspACI CCGC 5 cut(s) 275, 823, 958, 2040, 2225
BspANI GGCC 5 cut(s) 209, 688, 775, 1010, 2523
BspFNI CGCG 2 cut(s) 958, 1988
BspLI GGNNCC 3 cut(s) 363, 651, 2523
BspMAI CTGCAG 1 cut(s) 2022
BspMI ACCTGC 2 cut(s) 1660, 2471
BspPI GGATC 2 cut(s) 1059, 2317
BspQI GCTCTTC 1 cut(s) 2114
BspT104I TTCGAA 2 cut(s) 112, 2453
BsrDI GCAATG 2 cut(s) 321, 1165
BsrI ACTGG 3 cut(s) 1494, 1834, 2076
BssECI CCNNGG 7 cut(s) 24, 404, 738, 1011, 1468, 2378, 2432
BssMI GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
BssSI CACGAG 3 cut(s) 250, 507, 671
BssT1I CCWWGG 3 cut(s) 404, 1011, 2432
Bst2BI CACGAG 3 cut(s) 250, 507, 671
Bst2UI CCWGG 4 cut(s) 1470, 1743, 2307, 2379
Bst4CI ACNGT 6 cut(s) 660, 932, 1456, 1818, 2395, 2445
Bst6I CTCTTC 4 cut(s) 291, 1565, 1860, 2114
BstBI TTCGAA 2 cut(s) 112, 2453
BstC8I GCNNGC 6 cut(s) 41, 197, 777, 821, 1156, 2421
BstDSI CCRYGG 2 cut(s) 24, 1011
BstF5I GGATG 6 cut(s) 997, 1294, 1667, 1697, 1708, 2161
BstFNI CGCG 2 cut(s) 958, 1988
BstHHI GCGC 2 cut(s) 528, 1990
BstKTI GATC 9 cut(s) 237, 430, 693, 790, 1027, 1054, 1555, 2312, 2465
BstMAI GTCTC 7 cut(s) 416, 431, 1103, 1480, 1533, 1944, 2215
BstMBI GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
BstMCI CGRYCG 3 cut(s) 689, 693, 2465
BstMWI GCNNNNNNNGC 6 cut(s) 45, 325, 351, 1103, 1112, 2180
BstNI CCWGG 4 cut(s) 1470, 1743, 2307, 2379
BstNSI RCATGY 2 cut(s) 1158, 1682
BstSCI CCNGG 4 cut(s) 1468, 1741, 2305, 2377
BstSFI CTRYAG 3 cut(s) 1446, 2018, 2441
BstSLI GKGCMC 1 cut(s) 2525
BstUI CGCG 2 cut(s) 958, 1988
BstV1I GCAGC 5 cut(s) 142, 1157, 1977, 2004, 2158
BstV2I GAAGAC 1 cut(s) 970
BstX2I RGATCY 1 cut(s) 787
BstYI RGATCY 1 cut(s) 787
BstZI CGGCCG 1 cut(s) 686
Bsu36I CCTNAGG 1 cut(s) 2538
BsuRI GGCC 5 cut(s) 209, 688, 775, 1010, 2523
BtgI CCRYGG 2 cut(s) 24, 1011
BtsCI GGATG 6 cut(s) 997, 1294, 1667, 1697, 1708, 2161
BtsI GCAGTG 1 cut(s) 2244
BtsIMutI CAGTG 2 cut(s) 656, 2244
BveI ACCTGC 2 cut(s) 1660, 2471
Cac8I GCNNGC 6 cut(s) 41, 197, 777, 821, 1156, 2421
CaiI CAGNNNCTG 2 cut(s) 1170, 1931
CfoI GCGC 2 cut(s) 528, 1990
Cfr13I GGNCC 7 cut(s) 21, 1523, 1786, 2303, 2486, 2521, 2522
CseI GACGC 2 cut(s) 71, 825
Csp6I GTAC 6 cut(s) 843, 1301, 1587, 1649, 1676, 2352
CspCI CAANNNNNGTGG 2 cut(s) 199, 234
CviQI GTAC 6 cut(s) 843, 1301, 1587, 1649, 1676, 2352
DpnI GATC 9 cut(s) 236, 429, 692, 789, 1026, 1053, 1554, 2311, 2464
DpnII GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
DraI TTTAAA 2 cut(s) 1180, 1963
DraIII CACNNNGTG 1 cut(s) 310
EaeI YGGCCR 3 cut(s) 207, 686, 1008
EagI CGGCCG 1 cut(s) 686
Eam1104I CTCTTC 4 cut(s) 291, 1565, 1860, 2114
EarI CTCTTC 4 cut(s) 291, 1565, 1860, 2114
Ecl136II GAGCTC 2 cut(s) 58, 265
EclXI CGGCCG 1 cut(s) 686
Eco130I CCWWGG 3 cut(s) 404, 1011, 2432
Eco24I GRGCYC 3 cut(s) 60, 267, 2525
Eco32I GATATC 1 cut(s) 1281
Eco47I GGWCC 5 cut(s) 21, 1523, 1786, 2303, 2486
Eco52I CGGCCG 1 cut(s) 686
Eco53kI GAGCTC 2 cut(s) 58, 265
Eco57I CTGAAG 3 cut(s) 1236, 1647, 2388
Eco81I CCTNAGG 1 cut(s) 2538
Eco88I CYCGRG 2 cut(s) 737, 1059
EcoICRI GAGCTC 2 cut(s) 58, 265
EcoO109I RGGNCCY 2 cut(s) 2521, 2522
EcoRII CCWGG 4 cut(s) 1468, 1741, 2305, 2377
EcoRV GATATC 1 cut(s) 1281
EcoT14I CCWWGG 3 cut(s) 404, 1011, 2432
EcoT22I ATGCAT 2 cut(s) 868, 1338
EcoT38I GRGCYC 3 cut(s) 60, 267, 2525
ErhI CCWWGG 3 cut(s) 404, 1011, 2432
FaqI GGGAC 3 cut(s) 872, 1451, 1981
FbaI TGATCA 1 cut(s) 234
Fnu4HI GCNGC 6 cut(s) 131, 1171, 1991, 2018, 2041, 2172
FokI GGATG 6 cut(s) 984, 1301, 1654, 1704, 1715, 2168
FriOI GRGCYC 3 cut(s) 60, 267, 2525
Fsp4HI GCNGC 6 cut(s) 131, 1171, 1991, 2018, 2041, 2172
FspBI CTAG 5 cut(s) 887, 1512, 1601, 1644, 2477
FspI TGCGCA 1 cut(s) 527
GlaI GCGC 2 cut(s) 527, 1989
GluI GCNGC 6 cut(s) 131, 1171, 1991, 2018, 2041, 2172
GsuI CTGGAG 1 cut(s) 2253
HaeIII GGCC 5 cut(s) 209, 688, 775, 1010, 2523
HapII CCGG 1 cut(s) 71
HgaI GACGC 2 cut(s) 71, 825
HhaI GCGC 2 cut(s) 528, 1990
Hin6I GCGC 2 cut(s) 526, 1988
HinP1I GCGC 2 cut(s) 526, 1988
HpaII CCGG 1 cut(s) 71
HphI GGTGA 5 cut(s) 65, 85, 1355, 1637, 2384
Hpy166II GTNNAC 8 cut(s) 140, 149, 1628, 1789, 1835, 1984, 2242, 2489
Hpy8I GTNNAC 8 cut(s) 140, 149, 1628, 1789, 1835, 1984, 2242, 2489
Hpy99I CGWCG 2 cut(s) 65, 437
HpyAV CCTTC 8 cut(s) 692, 890, 1263, 1322, 2136, 2363, 2461, 2512
HpyCH4III ACNGT 6 cut(s) 660, 932, 1456, 1818, 2395, 2445
HpyCH4IV ACGT 3 cut(s) 521, 556, 992
HpyF10VI GCNNNNNNNGC 6 cut(s) 45, 325, 351, 1103, 1112, 2180
HpySE526I ACGT 3 cut(s) 521, 556, 992
HspAI GCGC 2 cut(s) 526, 1988
Ksp22I TGATCA 1 cut(s) 234
Kzo9I GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
LguI GCTCTTC 1 cut(s) 2114
LmnI GCTCC 4 cut(s) 1102, 1321, 2234, 2382
Lsp1109I GCAGC 5 cut(s) 142, 1157, 1977, 2004, 2158
LweI GCATC 7 cut(s) 182, 738, 1279, 1676, 1961, 2027, 2146
MaeI CTAG 5 cut(s) 887, 1512, 1601, 1644, 2477
MaeII ACGT 3 cut(s) 521, 556, 992
MaeIII GTNAC 4 cut(s) 73, 557, 768, 2078
MalI GATC 9 cut(s) 236, 429, 692, 789, 1026, 1053, 1554, 2311, 2464
MboI GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
MfeI CAATTG 1 cut(s) 417
MflI RGATCY 1 cut(s) 787
MhlI GDGCHC 5 cut(s) 60, 267, 723, 2109, 2525
MlsI TGGCCA 1 cut(s) 1010
MluNI TGGCCA 1 cut(s) 1010
MlyI GAGTC 5 cut(s) 433, 1385, 1621, 1766, 2410
MmeI TCCRAC 1 cut(s) 1006
Mox20I TGGCCA 1 cut(s) 1010
Mph1103I ATGCAT 2 cut(s) 868, 1338
MroXI GAANNNNTTC 2 cut(s) 300, 1210
MscI TGGCCA 1 cut(s) 1010
MseI TTAA 8 cut(s) 803, 1179, 1421, 1727, 1769, 1809, 1962, 2058
MslI CAYNNNNRTG 1 cut(s) 1341
Msp20I TGGCCA 1 cut(s) 1010
MspA1I CMGCKG 1 cut(s) 2315
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 4 cut(s) 1470, 1743, 2307, 2379
MunI CAATTG 1 cut(s) 417
Mva1269I GAATGC 3 cut(s) 399, 1338, 2185
MvaI CCWGG 4 cut(s) 1470, 1743, 2307, 2379
MvnI CGCG 2 cut(s) 958, 1988
MwoI GCNNNNNNNGC 6 cut(s) 45, 325, 351, 1103, 1112, 2180
NcoI CCATGG 1 cut(s) 1011
NdeII GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
NlaIV GGNNCC 3 cut(s) 363, 651, 2523
NmuCI GTSAC 1 cut(s) 73
NsbI TGCGCA 1 cut(s) 527
NsiI ATGCAT 2 cut(s) 868, 1338
NspI RCATGY 2 cut(s) 1158, 1682
NspV TTCGAA 2 cut(s) 112, 2453
PaeI GCATGC 1 cut(s) 1158
PaeR7I CTCGAG 1 cut(s) 1059
PaqCI CACCTGC 1 cut(s) 2471
PciSI GCTCTTC 1 cut(s) 2114
PctI GAATGC 3 cut(s) 399, 1338, 2185
PdmI GAANNNNTTC 2 cut(s) 300, 1210
PfoI TCCNGGA 1 cut(s) 2305
PkrI GCNGC 6 cut(s) 132, 1172, 1992, 2019, 2042, 2173
Ple19I CGATCG 2 cut(s) 693, 2465
PleI GAGTC 5 cut(s) 433, 1385, 1620, 1765, 2409
PpsI GAGTC 5 cut(s) 433, 1385, 1620, 1765, 2409
PsiI TTATAA 1 cut(s) 2069
Psp124BI GAGCTC 2 cut(s) 60, 267
Psp1406I AACGTT 2 cut(s) 521, 556
Psp6I CCWGG 4 cut(s) 1468, 1741, 2305, 2377
PspGI CCWGG 4 cut(s) 1468, 1741, 2305, 2377
PspN4I GGNNCC 3 cut(s) 363, 651, 2523
PspOMI GGGCCC 1 cut(s) 2521
PspPI GGNCC 7 cut(s) 21, 1523, 1786, 2303, 2486, 2521, 2522
PspXI VCTCGAGB 1 cut(s) 1059
PstI CTGCAG 1 cut(s) 2022
PstNI CAGNNNCTG 2 cut(s) 1170, 1931
PsuI RGATCY 1 cut(s) 787
PvuI CGATCG 2 cut(s) 693, 2465
PvuII CAGCTG 1 cut(s) 2315
RsaI GTAC 6 cut(s) 844, 1302, 1588, 1650, 1677, 2353
RsaNI GTAC 6 cut(s) 843, 1301, 1587, 1649, 1676, 2352
RseI CAYNNNNRTG 1 cut(s) 1341
SacI GAGCTC 2 cut(s) 60, 267
SapI GCTCTTC 1 cut(s) 2114
SaqAI TTAA 8 cut(s) 803, 1179, 1421, 1727, 1769, 1809, 1962, 2058
SatI GCNGC 6 cut(s) 131, 1171, 1991, 2018, 2041, 2172
Sau3AI GATC 9 cut(s) 234, 427, 690, 787, 1024, 1051, 1552, 2309, 2462
Sau96I GGNCC 7 cut(s) 21, 1523, 1786, 2303, 2486, 2521, 2522
ScaI AGTACT 1 cut(s) 2353
SchI GAGTC 5 cut(s) 433, 1385, 1621, 1766, 2410
ScrFI CCNGG 4 cut(s) 1470, 1743, 2307, 2379
SduI GDGCHC 5 cut(s) 60, 267, 723, 2109, 2525
SfaNI GCATC 7 cut(s) 182, 738, 1279, 1676, 1961, 2027, 2146
SfcI CTRYAG 3 cut(s) 1446, 2018, 2441
Sfr274I CTCGAG 1 cut(s) 1059
SfuI TTCGAA 2 cut(s) 112, 2453
SinI GGWCC 5 cut(s) 21, 1523, 1786, 2303, 2486
SlaI CTCGAG 1 cut(s) 1059
SmiMI CAYNNNNRTG 1 cut(s) 1341
SmlI CTYRAG 3 cut(s) 266, 1059, 1101
SmoI CTYRAG 3 cut(s) 266, 1059, 1101
SphI GCATGC 1 cut(s) 1158
SsiI CCGC 5 cut(s) 275, 823, 958, 2040, 2225
SspMI CTAG 5 cut(s) 887, 1512, 1601, 1644, 2477
SstI GAGCTC 2 cut(s) 60, 267
StyD4I CCNGG 4 cut(s) 1468, 1741, 2305, 2377
StyI CCWWGG 3 cut(s) 404, 1011, 2432
TaaI ACNGT 6 cut(s) 660, 932, 1456, 1818, 2395, 2445
TaiI ACGT 3 cut(s) 524, 559, 995
TatI WGTACW 2 cut(s) 1675, 2351
TauI GCSGC 1 cut(s) 2043
Tru1I TTAA 8 cut(s) 803, 1179, 1421, 1727, 1769, 1809, 1962, 2058
Tru9I TTAA 8 cut(s) 803, 1179, 1421, 1727, 1769, 1809, 1962, 2058
TscAI CASTG 2 cut(s) 663, 2244
TseFI GTSAC 1 cut(s) 73
TseI GCWGC 5 cut(s) 130, 1170, 1990, 2017, 2171
Tsp45I GTSAC 1 cut(s) 73
TspGWI ACGGA 9 cut(s) 13, 92, 330, 633, 1369, 1788, 2047, 2295, 2342
TspRI CASTG 2 cut(s) 663, 2244
VpaK11BI GGWCC 5 cut(s) 21, 1523, 1786, 2303, 2486
XapI RAATTY 4 cut(s) 86, 1209, 1243, 2054
XbaI TCTAGA 2 cut(s) 886, 1643
XceI RCATGY 2 cut(s) 1158, 1682
XhoI CTCGAG 1 cut(s) 1059
XmnI GAANNNNTTC 2 cut(s) 300, 1210
XspI CTAG 5 cut(s) 887, 1512, 1601, 1644, 2477
ZrmI AGTACT 1 cut(s) 2353
Zsp2I ATGCAT 2 cut(s) 868, 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.