RNA polymerase II C-terminal domain phosphatase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01270 AT5G01270 |
| fragaria_vesca | FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 |
| malus_domestica | MD04G1150600.v1.1 MD04G1150700.v1.1 MD12G1164700.v1.1 |
| prunus_persica | Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 |
| pyrus_communis | pycom04g13630 pycom12g15760 |
| rosa_chinensis | RchiOBHm_Chr3g0463301 |
| rosa_laevigata | RLG00000024792 |
| rosa_multiflora | Rmu_co8080032.1_g000001 Rmu_sc0000923.1_g000001 Rmu_sc0002976.1_g000008 Rmu_sc0033161.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00416690 |
| rosa_rugosa | Rorug03G0063700 Rorug03G0063700 |
| rosa_samantha | Rh3AG121600 Rh3BG126100 Rh3CG128000 Rh3DG127200 |
| rosa_wichuraiana | Rw3G010330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2509 |
| Acc36I | ACCTGC | 1 cut(s) | 784 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1038 |
| AccBSI | CCGCTC | 1 cut(s) | 154 |
| AccI | GTMKAC | 1 cut(s) | 30 |
| AciI | CCGC | 7 cut(s) | 77, 152, 227, 359, 556, 766, 1946 |
| AclWI | GGATC | 4 cut(s) | 488, 1059, 2335, 2466 |
| AcsI | RAATTY | 6 cut(s) | 85, 335, 1194, 1209, 1243, 2421 |
| AcuI | CTGAAG | 1 cut(s) | 2403 |
| AfaI | GTAC | 6 cut(s) | 377, 560, 844, 1486, 1600, 2401 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1038, 2258 |
| AgeI | ACCGGT | 1 cut(s) | 2165 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 895 |
| AjnI | CCWGG | 7 cut(s) | 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2053, 2085 |
| AluBI | AGCT | 8 cut(s) | 43, 58, 1115, 1557, 1632, 1759, 2220, 2338 |
| AluI | AGCT | 8 cut(s) | 43, 58, 1115, 1557, 1632, 1759, 2220, 2338 |
| Alw21I | GWGCWC | 1 cut(s) | 723 |
| Alw26I | GTCTC | 2 cut(s) | 431, 1103 |
| AlwI | GGATC | 4 cut(s) | 488, 1059, 2335, 2466 |
| Ama87I | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| AoxI | GGCC | 3 cut(s) | 207, 686, 1499 |
| ApeKI | GCWGC | 9 cut(s) | 43, 130, 1460, 1478, 2017, 2044, 2198, 2237, 2378 |
| ApoI | RAATTY | 6 cut(s) | 85, 335, 1194, 1209, 1243, 2421 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 160, 192 |
| AsiGI | ACCGGT | 1 cut(s) | 2165 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 977, 1210, 1811 |
| AspS9I | GGNCC | 3 cut(s) | 928, 1817, 2321 |
| AsuC2I | CCSGG | 2 cut(s) | 893, 894 |
| AsuHPI | GGTGA | 1 cut(s) | 2422 |
| AvaI | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| AvaII | GGWCC | 3 cut(s) | 928, 1817, 2321 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 741, 774 |
| BanII | GRGCYC | 1 cut(s) | 1644 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 487, 519, 1735, 1767 |
| BauI | CACGAG | 1 cut(s) | 671 |
| BbsI | GAAGAC | 1 cut(s) | 970 |
| Bbv12I | GWGCWC | 1 cut(s) | 723 |
| BbvI | GCAGC | 9 cut(s) | 30, 142, 1447, 1465, 2004, 2031, 2185, 2249, 2365 |
| BccI | CCATC | 7 cut(s) | 512, 604, 1000, 1005, 1698, 2029, 2342 |
| BceAI | ACGGC | 2 cut(s) | 288, 1921 |
| BciT130I | CCWGG | 7 cut(s) | 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| BciVI | GTATCC | 2 cut(s) | 125, 1963 |
| BclI | TGATCA | 1 cut(s) | 234 |
| BcnI | CCSGG | 2 cut(s) | 893, 894 |
| BcoDI | GTCTC | 2 cut(s) | 431, 1103 |
| BfaI | CTAG | 3 cut(s) | 389, 1116, 1613 |
| BfmI | CTRYAG | 2 cut(s) | 2045, 2358 |
| BfuAI | ACCTGC | 1 cut(s) | 784 |
| BfuI | GTATCC | 2 cut(s) | 125, 1963 |
| BglII | AGATCT | 1 cut(s) | 1436 |
| BlpI | GCTNAGC | 2 cut(s) | 1638, 2334 |
| BmcAI | AGTACT | 1 cut(s) | 2401 |
| Bme1390I | CCNGG | 9 cut(s) | 893, 894, 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| Bme18I | GGWCC | 3 cut(s) | 928, 1817, 2321 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 895 |
| BmeT110I | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| BmgT120I | GGNCC | 3 cut(s) | 928, 1817, 2321 |
| BmiI | GGNNCC | 4 cut(s) | 363, 651, 955, 2164 |
| BmrFI | CCNGG | 9 cut(s) | 893, 894, 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| BmsI | GCATC | 6 cut(s) | 182, 513, 738, 1279, 1976, 2173 |
| BpiI | GAAGAC | 1 cut(s) | 970 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 133, 165 |
| BpmI | CTGGAG | 4 cut(s) | 149, 662, 1236, 2163 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1638, 2334 |
| BpuEI | CTTGAG | 2 cut(s) | 1086, 1434 |
| BpuMI | CCSGG | 2 cut(s) | 893, 894 |
| BsaBI | GATNNNNATC | 2 cut(s) | 113, 1050 |
| BsaJI | CCNNGG | 9 cut(s) | 24, 34, 892, 893, 1284, 1594, 1892, 2393, 2475 |
| BsaWI | WCCGGW | 3 cut(s) | 70, 120, 2165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2053, 2083 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1038, 2258 |
| Bse118I | RCCGGY | 4 cut(s) | 533, 1456, 1501, 2165 |
| Bse1I | ACTGG | 9 cut(s) | 91, 645, 753, 1017, 1127, 1849, 2146, 2263, 2436 |
| Bse3DI | GCAATG | 2 cut(s) | 1165, 2113 |
| Bse8I | GATNNNNATC | 2 cut(s) | 113, 1050 |
| BseBI | CCWGG | 7 cut(s) | 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| BseDI | CCNNGG | 9 cut(s) | 24, 34, 892, 893, 1284, 1594, 1892, 2393, 2475 |
| BseGI | GGATG | 8 cut(s) | 298, 528, 997, 1294, 1709, 2021, 2188, 2353 |
| BseJI | GATNNNNATC | 2 cut(s) | 113, 1050 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1038, 2258 |
| BseMI | GCAATG | 2 cut(s) | 1165, 2113 |
| BseMII | CTCAG | 8 cut(s) | 395, 1419, 1529, 1629, 1746, 2193, 2325, 2364 |
| BseNI | ACTGG | 9 cut(s) | 91, 645, 753, 1017, 1127, 1849, 2146, 2263, 2436 |
| BseRI | GAGGAG | 4 cut(s) | 311, 659, 1089, 1597 |
| BseXI | GCAGC | 9 cut(s) | 30, 142, 1447, 1465, 2004, 2031, 2185, 2249, 2365 |
| BsgI | GTGCAG | 3 cut(s) | 1140, 1650, 2086 |
| BshFI | GGCC | 3 cut(s) | 209, 688, 1501 |
| BshTI | ACCGGT | 1 cut(s) | 2165 |
| BsiHKAI | GWGCWC | 1 cut(s) | 723 |
| BsiHKCI | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| BsiSI | CCGG | 8 cut(s) | 71, 121, 534, 893, 1076, 1457, 1502, 2166 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1038, 2258 |
| BsmAI | GTCTC | 2 cut(s) | 431, 1103 |
| BsmBI | CGTCTC | 1 cut(s) | 431 |
| BsmI | GAATGC | 3 cut(s) | 399, 1679, 2212 |
| BsnI | GGCC | 3 cut(s) | 209, 688, 1501 |
| BsoBI | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| Bsp1286I | GDGCHC | 2 cut(s) | 723, 1644 |
| Bsp1407I | TGTACA | 1 cut(s) | 375 |
| Bsp143I | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1638, 2334 |
| Bsp19I | CCATGG | 1 cut(s) | 34 |
| BspACI | CCGC | 7 cut(s) | 77, 152, 227, 359, 556, 766, 1946 |
| BspANI | GGCC | 3 cut(s) | 209, 688, 1501 |
| BspCNI | CTCAG | 8 cut(s) | 396, 1420, 1528, 1630, 1747, 2194, 2326, 2365 |
| BspLI | GGNNCC | 4 cut(s) | 363, 651, 955, 2164 |
| BspMAI | CTGCAG | 1 cut(s) | 2049 |
| BspMI | ACCTGC | 1 cut(s) | 784 |
| BspPI | GGATC | 4 cut(s) | 488, 1059, 2335, 2466 |
| BsrBI | CCGCTC | 1 cut(s) | 154 |
| BsrDI | GCAATG | 2 cut(s) | 1165, 2113 |
| BsrFI | RCCGGY | 4 cut(s) | 533, 1456, 1501, 2165 |
| BsrGI | TGTACA | 1 cut(s) | 375 |
| BsrI | ACTGG | 9 cut(s) | 91, 645, 753, 1017, 1127, 1849, 2146, 2263, 2436 |
| BssAI | RCCGGY | 4 cut(s) | 533, 1456, 1501, 2165 |
| BssECI | CCNNGG | 9 cut(s) | 24, 34, 892, 893, 1284, 1594, 1892, 2393, 2475 |
| BssMI | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| BssSI | CACGAG | 1 cut(s) | 671 |
| BssT1I | CCWWGG | 3 cut(s) | 34, 1594, 2475 |
| Bst2BI | CACGAG | 1 cut(s) | 671 |
| Bst2UI | CCWGG | 7 cut(s) | 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| Bst4CI | ACNGT | 5 cut(s) | 380, 660, 932, 1028, 2410 |
| Bst6I | CTCTTC | 2 cut(s) | 1868, 1875 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1460, 2246 |
| BstAUI | TGTACA | 1 cut(s) | 375 |
| BstC8I | GCNNGC | 5 cut(s) | 41, 1156, 1665, 1677, 2433 |
| BstDSI | CCRYGG | 2 cut(s) | 24, 34 |
| BstF5I | GGATG | 8 cut(s) | 298, 528, 997, 1294, 1709, 2021, 2188, 2353 |
| BstKTI | GATC | 8 cut(s) | 237, 430, 483, 1054, 1439, 1567, 2330, 2474 |
| BstMAI | GTCTC | 2 cut(s) | 431, 1103 |
| BstMBI | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| BstNI | CCWGG | 7 cut(s) | 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| BstNSI | RCATGY | 1 cut(s) | 1158 |
| BstSCI | CCNGG | 9 cut(s) | 891, 892, 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| BstSFI | CTRYAG | 2 cut(s) | 2045, 2358 |
| BstV1I | GCAGC | 9 cut(s) | 30, 142, 1447, 1465, 2004, 2031, 2185, 2249, 2365 |
| BstV2I | GAAGAC | 1 cut(s) | 970 |
| BstX2I | RGATCY | 1 cut(s) | 1436 |
| BstYI | RGATCY | 1 cut(s) | 1436 |
| BsuI | GTATCC | 2 cut(s) | 125, 1963 |
| BsuRI | GGCC | 3 cut(s) | 209, 688, 1501 |
| BtgI | CCRYGG | 2 cut(s) | 24, 34 |
| BtsCI | GGATG | 8 cut(s) | 298, 528, 997, 1294, 1709, 2021, 2188, 2353 |
| BtsIMutI | CAGTG | 6 cut(s) | 385, 656, 760, 1010, 1842, 2139 |
| BveI | ACCTGC | 1 cut(s) | 784 |
| Cac8I | GCNNGC | 5 cut(s) | 41, 1156, 1665, 1677, 2433 |
| Cfr10I | RCCGGY | 4 cut(s) | 533, 1456, 1501, 2165 |
| Cfr13I | GGNCC | 3 cut(s) | 928, 1817, 2321 |
| Cfr9I | CCCGGG | 1 cut(s) | 892 |
| CseI | GACGC | 2 cut(s) | 71, 825 |
| CsiI | ACCWGGT | 2 cut(s) | 1522, 1828 |
| Csp6I | GTAC | 6 cut(s) | 376, 559, 843, 1485, 1599, 2400 |
| CspAI | ACCGGT | 1 cut(s) | 2165 |
| CviQI | GTAC | 6 cut(s) | 376, 559, 843, 1485, 1599, 2400 |
| DpnI | GATC | 8 cut(s) | 236, 429, 482, 1053, 1438, 1566, 2329, 2473 |
| DpnII | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| DriI | GACNNNNNGTC | 1 cut(s) | 895 |
| Eam1104I | CTCTTC | 2 cut(s) | 1868, 1875 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 895 |
| EarI | CTCTTC | 2 cut(s) | 1868, 1875 |
| EciI | GGCGGA | 1 cut(s) | 92 |
| Eco130I | CCWWGG | 3 cut(s) | 34, 1594, 2475 |
| Eco24I | GRGCYC | 1 cut(s) | 1644 |
| Eco47I | GGWCC | 3 cut(s) | 928, 1817, 2321 |
| Eco57I | CTGAAG | 1 cut(s) | 2403 |
| Eco88I | CYCGRG | 3 cut(s) | 737, 892, 1059 |
| EcoRII | CCWGG | 7 cut(s) | 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| EcoT14I | CCWWGG | 3 cut(s) | 34, 1594, 2475 |
| EcoT38I | GRGCYC | 1 cut(s) | 1644 |
| ErhI | CCWWGG | 3 cut(s) | 34, 1594, 2475 |
| Esp3I | CGTCTC | 1 cut(s) | 431 |
| FauI | CCCGC | 1 cut(s) | 1939 |
| FbaI | TGATCA | 1 cut(s) | 234 |
| FblI | GTMKAC | 1 cut(s) | 30 |
| FokI | GGATG | 8 cut(s) | 305, 535, 984, 1301, 1716, 2008, 2195, 2360 |
| FriOI | GRGCYC | 1 cut(s) | 1644 |
| FspBI | CTAG | 3 cut(s) | 389, 1116, 1613 |
| GsuI | CTGGAG | 4 cut(s) | 149, 662, 1236, 2163 |
| HaeIII | GGCC | 3 cut(s) | 209, 688, 1501 |
| HapII | CCGG | 8 cut(s) | 71, 121, 534, 893, 1076, 1457, 1502, 2166 |
| HgaI | GACGC | 2 cut(s) | 71, 825 |
| HpaII | CCGG | 8 cut(s) | 71, 121, 534, 893, 1076, 1457, 1502, 2166 |
| HphI | GGTGA | 1 cut(s) | 2422 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 835, 1801, 2269, 2498 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 835, 1801, 2269, 2498 |
| HpyAV | CCTTC | 4 cut(s) | 1328, 1521, 2173, 2222 |
| HpyCH4III | ACNGT | 5 cut(s) | 380, 660, 932, 1028, 2410 |
| HpyCH4IV | ACGT | 2 cut(s) | 440, 837 |
| HpySE526I | ACGT | 2 cut(s) | 440, 837 |
| Ksp22I | TGATCA | 1 cut(s) | 234 |
| Kzo9I | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| LmnI | GCTCC | 3 cut(s) | 1102, 1261, 1327 |
| Lsp1109I | GCAGC | 9 cut(s) | 30, 142, 1447, 1465, 2004, 2031, 2185, 2249, 2365 |
| LweI | GCATC | 6 cut(s) | 182, 513, 738, 1279, 1976, 2173 |
| MabI | ACCWGGT | 2 cut(s) | 1522, 1828 |
| MaeI | CTAG | 3 cut(s) | 389, 1116, 1613 |
| MaeII | ACGT | 2 cut(s) | 440, 837 |
| MaeIII | GTNAC | 4 cut(s) | 768, 897, 1568, 2008 |
| MalI | GATC | 8 cut(s) | 236, 429, 482, 1053, 1438, 1566, 2329, 2473 |
| MbiI | CCGCTC | 1 cut(s) | 154 |
| MboI | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| MfeI | CAATTG | 1 cut(s) | 417 |
| MflI | RGATCY | 1 cut(s) | 1436 |
| MhlI | GDGCHC | 2 cut(s) | 723, 1644 |
| MlyI | GAGTC | 7 cut(s) | 1071, 1406, 1439, 1584, 1633, 2422, 2465 |
| MmeI | TCCRAC | 2 cut(s) | 479, 1006 |
| MroXI | GAANNNNTTC | 3 cut(s) | 977, 1210, 1811 |
| MseI | TTAA | 5 cut(s) | 803, 905, 945, 1367, 2096 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2259 |
| MspI | CCGG | 8 cut(s) | 71, 121, 534, 893, 1076, 1457, 1502, 2166 |
| MspR9I | CCNGG | 9 cut(s) | 893, 894, 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| MunI | CAATTG | 1 cut(s) | 417 |
| Mva1269I | GAATGC | 3 cut(s) | 399, 1679, 2212 |
| MvaI | CCWGG | 7 cut(s) | 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| NciI | CCSGG | 2 cut(s) | 893, 894 |
| NcoI | CCATGG | 1 cut(s) | 34 |
| NdeII | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 651, 955, 2164 |
| NmeAIII | GCCGAG | 1 cut(s) | 345 |
| NmuCI | GTSAC | 3 cut(s) | 897, 1568, 2008 |
| NspI | RCATGY | 1 cut(s) | 1158 |
| PaeI | GCATGC | 1 cut(s) | 1158 |
| PaeR7I | CTCGAG | 1 cut(s) | 1059 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 176 |
| PctI | GAATGC | 3 cut(s) | 399, 1679, 2212 |
| PdmI | GAANNNNTTC | 3 cut(s) | 977, 1210, 1811 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1038 |
| PfoI | TCCNGGA | 1 cut(s) | 2323 |
| PinAI | ACCGGT | 1 cut(s) | 2165 |
| PleI | GAGTC | 7 cut(s) | 1070, 1405, 1438, 1584, 1632, 2421, 2464 |
| PpsI | GAGTC | 7 cut(s) | 1070, 1405, 1438, 1584, 1632, 2421, 2464 |
| PsiI | TTATAA | 1 cut(s) | 2509 |
| Psp6I | CCWGG | 7 cut(s) | 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| PspGI | CCWGG | 7 cut(s) | 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 651, 955, 2164 |
| PspPI | GGNCC | 3 cut(s) | 928, 1817, 2321 |
| PspXI | VCTCGAGB | 1 cut(s) | 1059 |
| PstI | CTGCAG | 1 cut(s) | 2049 |
| PsuI | RGATCY | 1 cut(s) | 1436 |
| RsaI | GTAC | 6 cut(s) | 377, 560, 844, 1486, 1600, 2401 |
| RsaNI | GTAC | 6 cut(s) | 376, 559, 843, 1485, 1599, 2400 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2259 |
| SaqAI | TTAA | 5 cut(s) | 803, 905, 945, 1367, 2096 |
| Sau3AI | GATC | 8 cut(s) | 234, 427, 480, 1051, 1436, 1564, 2327, 2471 |
| Sau96I | GGNCC | 3 cut(s) | 928, 1817, 2321 |
| ScaI | AGTACT | 1 cut(s) | 2401 |
| SchI | GAGTC | 7 cut(s) | 1071, 1406, 1439, 1584, 1633, 2422, 2465 |
| ScrFI | CCNGG | 9 cut(s) | 893, 894, 1524, 1608, 1773, 1830, 1893, 2325, 2394 |
| SduI | GDGCHC | 2 cut(s) | 723, 1644 |
| SexAI | ACCWGGT | 2 cut(s) | 1522, 1828 |
| SfaNI | GCATC | 6 cut(s) | 182, 513, 738, 1279, 1976, 2173 |
| SfcI | CTRYAG | 2 cut(s) | 2045, 2358 |
| Sfr274I | CTCGAG | 1 cut(s) | 1059 |
| SinI | GGWCC | 3 cut(s) | 928, 1817, 2321 |
| SlaI | CTCGAG | 1 cut(s) | 1059 |
| SmaI | CCCGGG | 1 cut(s) | 894 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2259 |
| SmlI | CTYRAG | 3 cut(s) | 1059, 1101, 1449 |
| SmoI | CTYRAG | 3 cut(s) | 1059, 1101, 1449 |
| SphI | GCATGC | 1 cut(s) | 1158 |
| SsiI | CCGC | 7 cut(s) | 77, 152, 227, 359, 556, 766, 1946 |
| SspMI | CTAG | 3 cut(s) | 389, 1116, 1613 |
| StyD4I | CCNGG | 9 cut(s) | 891, 892, 1522, 1606, 1771, 1828, 1891, 2323, 2392 |
| StyI | CCWWGG | 3 cut(s) | 34, 1594, 2475 |
| TaaI | ACNGT | 5 cut(s) | 380, 660, 932, 1028, 2410 |
| TaiI | ACGT | 2 cut(s) | 443, 840 |
| TaqI | TCGA | 7 cut(s) | 190, 201, 432, 483, 1060, 1350, 1739 |
| TaqII | GACCGA | 1 cut(s) | 1805 |
| TatI | WGTACW | 3 cut(s) | 375, 842, 2399 |
| TauI | GCSGC | 1 cut(s) | 229 |
| Tru1I | TTAA | 5 cut(s) | 803, 905, 945, 1367, 2096 |
| Tru9I | TTAA | 5 cut(s) | 803, 905, 945, 1367, 2096 |
| TscAI | CASTG | 6 cut(s) | 385, 663, 760, 1017, 1849, 2146 |
| TseFI | GTSAC | 3 cut(s) | 897, 1568, 2008 |
| TseI | GCWGC | 9 cut(s) | 43, 130, 1460, 1478, 2017, 2044, 2198, 2237, 2378 |
| Tsp45I | GTSAC | 3 cut(s) | 897, 1568, 2008 |
| TspDTI | ATGAA | 7 cut(s) | 476, 566, 1206, 1242, 1355, 1397, 1590 |
| TspGWI | ACGGA | 4 cut(s) | 13, 330, 2074, 2313 |
| TspMI | CCCGGG | 1 cut(s) | 892 |
| TspRI | CASTG | 6 cut(s) | 385, 663, 760, 1017, 1849, 2146 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1038 |
| VpaK11BI | GGWCC | 3 cut(s) | 928, 1817, 2321 |
| XapI | RAATTY | 6 cut(s) | 85, 335, 1194, 1209, 1243, 2421 |
| XbaI | TCTAGA | 1 cut(s) | 1612 |
| XceI | RCATGY | 1 cut(s) | 1158 |
| XhoI | CTCGAG | 1 cut(s) | 1059 |
| XmaI | CCCGGG | 1 cut(s) | 892 |
| XmiI | GTMKAC | 1 cut(s) | 30 |
| XmnI | GAANNNNTTC | 3 cut(s) | 977, 1210, 1811 |
| XspI | CTAG | 3 cut(s) | 389, 1116, 1613 |
| ZrmI | AGTACT | 1 cut(s) | 2401 |