RNA polymerase II C-terminal domain phosphatase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01270 AT5G01270 |
| fragaria_vesca | FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 FvH4_6g11640 |
| malus_domestica | MD04G1150600.v1.1 MD04G1150700.v1.1 MD12G1164700.v1.1 |
| prunus_persica | Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 Prupe.6G275400_v2.0.a1 |
| pyrus_communis | pycom04g13630 pycom12g15760 |
| rosa_chinensis | RchiOBHm_Chr3g0463301 |
| rosa_laevigata | RLG00000024792 |
| rosa_multiflora | Rmu_co8080032.1_g000001 Rmu_sc0000923.1_g000001 Rmu_sc0002976.1_g000008 Rmu_sc0033161.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00416690 |
| rosa_rugosa | Rorug03G0063700 Rorug03G0063700 |
| rosa_samantha | Rh3AG121600 Rh3BG126100 Rh3CG128000 Rh3DG127200 |
| rosa_wichuraiana | Rw3G010330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 153 |
| AfaI | GTAC | 1 cut(s) | 88 |
| AgsI | TTSAA | 3 cut(s) | 46, 71, 77 |
| AlwI | GGATC | 1 cut(s) | 153 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| AsuC2I | CCSGG | 1 cut(s) | 81 |
| AsuHPI | GGTGA | 1 cut(s) | 109 |
| BccI | CCATC | 1 cut(s) | 37 |
| BceAI | ACGGC | 1 cut(s) | 221 |
| BcnI | CCSGG | 1 cut(s) | 81 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 23 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| BmcAI | AGTACT | 1 cut(s) | 88 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmiI | GGNNCC | 1 cut(s) | 27 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BpuMI | CCSGG | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 2 cut(s) | 80, 162 |
| Bse1I | ACTGG | 1 cut(s) | 123 |
| BseDI | CCNNGG | 2 cut(s) | 80, 162 |
| BseNI | ACTGG | 1 cut(s) | 123 |
| BsiSI | CCGG | 1 cut(s) | 80 |
| Bsp143I | GATC | 1 cut(s) | 158 |
| BspLI | GGNNCC | 1 cut(s) | 27 |
| BspPI | GGATC | 1 cut(s) | 153 |
| BsrI | ACTGG | 1 cut(s) | 123 |
| BssECI | CCNNGG | 2 cut(s) | 80, 162 |
| BssMI | GATC | 1 cut(s) | 158 |
| BssT1I | CCWWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstKTI | GATC | 1 cut(s) | 161 |
| BstMBI | GATC | 1 cut(s) | 158 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 23 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| Csp6I | GTAC | 1 cut(s) | 87 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviJI | RGCY | 2 cut(s) | 26, 57 |
| CviKI_1 | RGCY | 2 cut(s) | 26, 57 |
| CviQI | GTAC | 1 cut(s) | 87 |
| DpnI | GATC | 1 cut(s) | 160 |
| DpnII | GATC | 1 cut(s) | 158 |
| Eco130I | CCWWGG | 1 cut(s) | 162 |
| EcoT14I | CCWWGG | 1 cut(s) | 162 |
| ErhI | CCWWGG | 1 cut(s) | 162 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 2 cut(s) | 53, 180 |
| FatI | CATG | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| GluI | GCNGC | 1 cut(s) | 15 |
| HapII | CCGG | 1 cut(s) | 80 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HinfI | GANTC | 2 cut(s) | 100, 143 |
| HpaII | CCGG | 1 cut(s) | 80 |
| HphI | GGTGA | 1 cut(s) | 109 |
| Hpy166II | GTNNAC | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 1 cut(s) | 186 |
| Hpy8I | GTNNAC | 1 cut(s) | 185 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 2 cut(s) | 152, 178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 23 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 158 |
| LmnI | GCTCC | 1 cut(s) | 31 |
| LpnPI | CCDG | 3 cut(s) | 51, 93, 136 |
| MaeIII | GTNAC | 1 cut(s) | 223 |
| MalI | GATC | 1 cut(s) | 160 |
| MboI | GATC | 1 cut(s) | 158 |
| MboII | GAAGA | 2 cut(s) | 179, 226 |
| MluCI | AATT | 1 cut(s) | 33 |
| MlyI | GAGTC | 2 cut(s) | 109, 152 |
| MspI | CCGG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 23 |
| NciI | CCSGG | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 158 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NlaIV | GGNNCC | 1 cut(s) | 27 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PleI | GAGTC | 2 cut(s) | 108, 151 |
| PpsI | GAGTC | 2 cut(s) | 108, 151 |
| PspN4I | GGNNCC | 1 cut(s) | 27 |
| RsaI | GTAC | 1 cut(s) | 88 |
| RsaNI | GTAC | 1 cut(s) | 87 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 1 cut(s) | 158 |
| ScaI | AGTACT | 1 cut(s) | 88 |
| SchI | GAGTC | 2 cut(s) | 109, 152 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SetI | ASST | 1 cut(s) | 52 |
| Sse9I | AATT | 1 cut(s) | 33 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| StyI | CCWWGG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TasI | AATT | 1 cut(s) | 33 |
| TatI | WGTACW | 1 cut(s) | 86 |
| TseI | GCWGC | 1 cut(s) | 14 |
| ZrmI | AGTACT | 1 cut(s) | 88 |