AT5G01510

root uv-b sensitive

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0012199
Physical Location & Seq
Forward (+)
201603 .. 205679
4077 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G01510.1

Sequence Viewer

Length: 1530 bp
ATGTACTGTACTTTGCGATTTCCTTTGCCTCTTCACATTCCCCAAACTCGAACAATGACGTCCTGTCAGCCGAAACGACGCCGTGTTGAGCACTTGCGGTGCTCTGCTCAGCCTAGTAGTATTCGTGAAGATGACGAAGATGCCGATGATAGGAGAGTTGGAGTTGAAAGACGAATTTCGATTGTGGTGGAGAGATACGGAAATGGCACTTCAAAAAGATATTTTCTAGATGATGATGATTCCCCTTTACAAGGCATTCTCGAGGAGCGTGAAACTAAGCCTGATAACAATTCTCAGAGCTCTAATTCCTCCGAAACGAACATTCTTTGGCTTCCAGATGTTGTCAGGGATTTTGTTTTCCCCTCAGGCTTTCCTGGGTCTGTTTCAGATGATTACTTGGACTATATGCTGTGGCAGTTCCCAACCAATATTACTGGCTGGATTTGTAATGTATTAGTCACGTCAAGTCTTCTCAAGGCGGTTGGGGTTGGCTCTTTCTCAGGAACTTCTGCTGCCGCTACTGCTGCTGCTTCTGCTGCAGCCATCAGATGGGTGTCCAAGGATGGAATTGGAGCTCTTGGCCGTCTTCTTATTGGTGGACGTTTTGGTAGTCTTTTTGATGATGATCCTAAGCAATGGCGCATGTATGCAGATTTTATTGGCAGTGCTGGAAGCTTCTTTGATTTGGCAACCCAGCTATATCCATCCCAGTTCCTACTGTTGGCATCCACGGGAAATCTTGCCAAGGCTGTGGCTAGAGGATTGAGAGACCCTTCATTCAGGGTGATTCAGAATCATTTCGCTATCTCAGGAAATCTTGGAGAGGTAGCAGCCAAGGAAGAAGTGTGGGAAGTTGCTGCGCAGCTAATTGGTCTTGGTTTCGGCATTCTGATCATTGACACGCCGGGCCTTGTAAAGTCATTTCCGTTTGTGTTACTTACATGGACGAGCATTAGACTTGTTCACCTCTGGCTACGCTACCAGTCGCTTGCAGTCCTACAATTTAACACGGTAAATCTCAAGCGTGCTCGTATCATAGTAGAATCTCATGTTGTGCACTCAGTTGTACCAGGATATGTTGACTGCAACAAGCGAGAAAACATTTTGCTGTGGCAGAGGTTCATGAAACCTCGAATCATCTTTGGTGTATCCCTTGAAGAGTTGTCTGGTCTGGAGAAATCTGTTTCTAAGGTCAAGGCACTCCTTAAGATGTACACAAAGGAGAAATATATTCTTACGTTGAATAAGTTGAACAAGGATACTGAGTTTTCTGTGTCCTTTAAGGTGAATGCCACAAGCAGAGACGTGTTGAGATGCCTTTGGCAAGCATATTGGTTAGAGGAGAACATGGAAGAAAGCTTTAAAGACAAGGATAGTGTGTTCCACTGGCTGAAGCAAAGCTTGTCGGAGATGGACAACAAGTTTGATGATTTCTTGTTCAAATTGGATACTGCTGGATGGAATCTACGTGAATCTAACTTGAAGGTTCCCAACCAAGTTCTCATAGACCAGGAATCTATCCCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

509

Amino Acids

57.61

Weight (kDa)

6.69

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVB_sens_prot PF04884 111 - 352 1.9e-69 Vitamin B6 photo-protection and homoeostasis domain
UVB_sens_C PF24160 361 - 496 2.1e-11 Root UVB sensitive protein, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01510
fragaria_vesca FvH4_6g11500 FvH4_6g11500 FvH4_6g42101
prunus_persica Prupe.6G276600_v2.0.a1
pyrus_communis pycom04g13740
rosa_chinensis RchiOBHm_Chr3g0463211
rosa_laevigata RLG00000024802
rosa_multiflora Rmu_co8068106.1_g000001 Rmu_co8190904.1_g000001 Rmu_sc0004643.1_g000002
rosa_roxburghii Rroxscaffold_6G00416800
rosa_rugosa Rorug03G0062400
rosa_samantha Rh3AG120600 Rh3BG125000 Rh3CG127100 Rh3DG126100 Rh3DG126200
rosa_wichuraiana Rw3G010240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
Acc16I TGCGCA 1 cut(s) 861
AccB7I CCANNNNNTGG 1 cut(s) 549
AciI CCGC 3 cut(s) 97, 479, 516
AclWI GGATC 1 cut(s) 620
AcoI YGGCCR 1 cut(s) 580
AcsI RAATTY 1 cut(s) 174
AcuI CTGAAG 1 cut(s) 1412
AcyI GRCGYC 2 cut(s) 59, 79
AfaI GTAC 4 cut(s) 5, 10, 1068, 1214
AfiI CCNNNNNNNGG 4 cut(s) 150, 251, 549, 721
AflII CTTAAG 1 cut(s) 1205
AflIII ACRYGT 1 cut(s) 1305
AgsI TTSAA 7 cut(s) 167, 213, 1157, 1243, 1252, 1441, 1483
AhdI GACNNNNNGTC 1 cut(s) 63
AjiI CACGTC 2 cut(s) 462, 1306
AjnI CCWGG 3 cut(s) 373, 1069, 1509
AloI GAACNNNNNNTCC 2 cut(s) 1364, 1396
AluBI AGCT 7 cut(s) 300, 575, 675, 697, 865, 1359, 1401
AluI AGCT 7 cut(s) 300, 575, 675, 697, 865, 1359, 1401
Alw21I GWGCWC 6 cut(s) 93, 104, 302, 577, 1030, 1059
Alw26I GTCTC 2 cut(s) 762, 1296
Alw44I GTGCAC 1 cut(s) 1055
AlwI GGATC 1 cut(s) 620
Ama87I CYCGRG 1 cut(s) 260
AoxI GGCC 2 cut(s) 580, 907
ApaLI GTGCAC 1 cut(s) 1055
ApeKI GCWGC 8 cut(s) 512, 524, 527, 536, 539, 830, 857, 862
ApoI RAATTY 1 cut(s) 174
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
Asp700I GAANNNNTTC 1 cut(s) 797
AspLEI GCGC 2 cut(s) 642, 862
AspS9I GGNCC 1 cut(s) 907
AsuC2I CCSGG 1 cut(s) 906
AsuHPI GGTGA 3 cut(s) 796, 956, 1297
AvaI CYCGRG 1 cut(s) 260
AxyI CCTNAGG 1 cut(s) 364
BaeGI GKGCMC 1 cut(s) 1059
BanII GRGCYC 2 cut(s) 302, 577
BbsI GAAGAC 2 cut(s) 461, 578
Bbv12I GWGCWC 6 cut(s) 93, 104, 302, 577, 1030, 1059
BbvI GCAGC 8 cut(s) 499, 511, 514, 523, 551, 842, 844, 874
BccI CCATC 6 cut(s) 543, 551, 557, 712, 1405, 1452
BceAI ACGGC 2 cut(s) 66, 567
BciT130I CCWGG 3 cut(s) 375, 1071, 1511
BciVI GTATCC 3 cut(s) 1159, 1252, 1441
BclI TGATCA 1 cut(s) 891
BcnI CCSGG 1 cut(s) 906
BcoDI GTCTC 2 cut(s) 762, 1296
BfaI CTAG 3 cut(s) 114, 227, 756
BfmI CTRYAG 1 cut(s) 537
BfrI CTTAAG 1 cut(s) 1205
BfuI GTATCC 3 cut(s) 1159, 1252, 1441
BisI GCNGC 9 cut(s) 513, 516, 525, 528, 537, 540, 831, 858, 863
BlpI GCTNAGC 1 cut(s) 108
BlsI GCNGC 9 cut(s) 514, 517, 526, 529, 538, 541, 832, 859, 864
Bme1390I CCNGG 4 cut(s) 375, 906, 1071, 1511
BmeRI GACNNNNNGTC 1 cut(s) 63
BmeT110I CYCGRG 1 cut(s) 260
BmgBI CACGTC 2 cut(s) 462, 1306
BmgT120I GGNCC 1 cut(s) 907
BmiI GGNNCC 1 cut(s) 1488
BmrFI CCNGG 4 cut(s) 375, 906, 1071, 1511
BmrI ACTGGG 1 cut(s) 703
BmsI GCATC 3 cut(s) 130, 734, 1304
BmuI ACTGGG 1 cut(s) 703
BpiI GAAGAC 2 cut(s) 461, 578
BpmI CTGGAG 1 cut(s) 1193
Bpu10I CCTNAGC 1 cut(s) 630
Bpu1102I GCTNAGC 1 cut(s) 108
BpuEI CTTGAG 2 cut(s) 458, 1004
BpuMI CCSGG 1 cut(s) 906
BsaAI YACGTR 1 cut(s) 1469
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 2 cut(s) 59, 79
BsaI GGTCTC 1 cut(s) 762
BsaJI CCNNGG 5 cut(s) 374, 558, 729, 744, 834
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 251, 549, 721
Bse1I ACTGG 4 cut(s) 439, 709, 982, 1391
Bse21I CCTNAGG 1 cut(s) 364
Bse3DI GCAATG 1 cut(s) 641
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 3 cut(s) 375, 1071, 1511
BseDI CCNNGG 5 cut(s) 374, 558, 729, 744, 834
BseGI GGATG 4 cut(s) 568, 704, 725, 1463
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 4 cut(s) 150, 251, 549, 721
BseMI GCAATG 1 cut(s) 641
BseMII CTCAG 7 cut(s) 122, 308, 378, 513, 822, 1074, 1254
BseNI ACTGG 4 cut(s) 439, 709, 982, 1391
BseRI GAGGAG 2 cut(s) 278, 1355
BseSI GKGCMC 1 cut(s) 1059
BseXI GCAGC 8 cut(s) 499, 511, 514, 523, 551, 842, 844, 874
BseYI CCCAGC 1 cut(s) 693
BshFI GGCC 2 cut(s) 582, 909
BsiHKAI GWGCWC 6 cut(s) 93, 104, 302, 577, 1030, 1059
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 1 cut(s) 905
BslI CCNNNNNNNGG 4 cut(s) 150, 251, 549, 721
BsmAI GTCTC 2 cut(s) 762, 1296
BsmBI CGTCTC 1 cut(s) 1296
BsmI GAATGC 3 cut(s) 255, 885, 1294
BsnI GGCC 2 cut(s) 582, 909
Bso31I GGTCTC 1 cut(s) 762
BsoBI CYCGRG 1 cut(s) 260
Bsp1286I GDGCHC 6 cut(s) 93, 104, 302, 577, 1030, 1059
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 2 cut(s) 625, 891
Bsp1720I GCTNAGC 1 cut(s) 108
BspACI CCGC 3 cut(s) 97, 479, 516
BspANI GGCC 2 cut(s) 582, 909
BspCNI CTCAG 7 cut(s) 121, 307, 377, 512, 821, 1073, 1255
BspHI TCATGA 1 cut(s) 1122
BspLI GGNNCC 1 cut(s) 1488
BspMAI CTGCAG 1 cut(s) 541
BspPI GGATC 1 cut(s) 620
BspTI CTTAAG 1 cut(s) 1205
BspTNI GGTCTC 1 cut(s) 762
BsrDI GCAATG 1 cut(s) 641
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 4 cut(s) 439, 709, 982, 1391
BssECI CCNNGG 5 cut(s) 374, 558, 729, 744, 834
BssMI GATC 2 cut(s) 625, 891
BssNI GRCGYC 2 cut(s) 59, 79
BssT1I CCWWGG 3 cut(s) 558, 744, 834
Bst2UI CCWGG 3 cut(s) 375, 1071, 1511
Bst4CI ACNGT 3 cut(s) 8, 720, 1012
Bst6I CTCTTC 2 cut(s) 36, 1152
BstACI GRCGYC 2 cut(s) 59, 79
BstAFI CTTAAG 1 cut(s) 1205
BstAUI TGTACA 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 1469
BstC8I GCNNGC 3 cut(s) 990, 1026, 1326
BstDSI CCRYGG 1 cut(s) 729
BstENI CCTNNNNNAGG 1 cut(s) 249
BstF5I GGATG 4 cut(s) 568, 704, 725, 1463
BstHHI GCGC 2 cut(s) 642, 862
BstKTI GATC 2 cut(s) 628, 894
BstMAI GTCTC 2 cut(s) 762, 1296
BstMBI GATC 2 cut(s) 625, 891
BstMWI GCNNNNNNNGC 4 cut(s) 521, 524, 533, 536
BstNI CCWGG 3 cut(s) 375, 1071, 1511
BstNSI RCATGY 1 cut(s) 646
BstSCI CCNGG 4 cut(s) 373, 904, 1069, 1509
BstSFI CTRYAG 1 cut(s) 537
BstSLI GKGCMC 1 cut(s) 1059
BstV1I GCAGC 8 cut(s) 499, 511, 514, 523, 551, 842, 844, 874
BstV2I GAAGAC 2 cut(s) 461, 578
BstXI CCANNNNNNTGG 1 cut(s) 751
Bsu36I CCTNAGG 1 cut(s) 364
BsuI GTATCC 3 cut(s) 1159, 1252, 1441
BsuRI GGCC 2 cut(s) 582, 909
BtgI CCRYGG 1 cut(s) 729
BtrI CACGTC 2 cut(s) 462, 1306
BtsCI GGATG 4 cut(s) 568, 704, 725, 1463
BtsI GCAGTG 1 cut(s) 670
BtsIMutI CAGTG 2 cut(s) 670, 1384
Cac8I GCNNGC 3 cut(s) 990, 1026, 1326
CciI TCATGA 1 cut(s) 1122
CfoI GCGC 2 cut(s) 642, 862
Cfr13I GGNCC 1 cut(s) 907
CseI GACGC 1 cut(s) 87
Csp6I GTAC 4 cut(s) 4, 9, 1067, 1213
CviAII CATG 5 cut(s) 643, 942, 1049, 1123, 1348
CviQI GTAC 4 cut(s) 4, 9, 1067, 1213
DpnI GATC 2 cut(s) 627, 893
DpnII GATC 2 cut(s) 625, 891
DraI TTTAAA 1 cut(s) 1363
DriI GACNNNNNGTC 1 cut(s) 63
EaeI YGGCCR 1 cut(s) 580
Eam1104I CTCTTC 2 cut(s) 36, 1152
Eam1105I GACNNNNNGTC 1 cut(s) 63
EarI CTCTTC 2 cut(s) 36, 1152
Ecl136II GAGCTC 2 cut(s) 300, 575
Eco130I CCWWGG 3 cut(s) 558, 744, 834
Eco24I GRGCYC 2 cut(s) 302, 577
Eco31I GGTCTC 1 cut(s) 762
Eco53kI GAGCTC 2 cut(s) 300, 575
Eco57I CTGAAG 1 cut(s) 1412
Eco81I CCTNAGG 1 cut(s) 364
Eco88I CYCGRG 1 cut(s) 260
EcoICRI GAGCTC 2 cut(s) 300, 575
EcoNI CCTNNNNNAGG 1 cut(s) 249
EcoRII CCWGG 3 cut(s) 373, 1069, 1509
EcoT14I CCWWGG 3 cut(s) 558, 744, 834
EcoT38I GRGCYC 2 cut(s) 302, 577
ErhI CCWWGG 3 cut(s) 558, 744, 834
Esp3I CGTCTC 1 cut(s) 1296
FaeI CATG 5 cut(s) 646, 945, 1052, 1126, 1351
FalI AAGNNNNNCTT 2 cut(s) 1385, 1417
FatI CATG 5 cut(s) 642, 941, 1048, 1122, 1347
FbaI TGATCA 1 cut(s) 891
Fnu4HI GCNGC 9 cut(s) 513, 516, 525, 528, 537, 540, 831, 858, 863
FokI GGATG 4 cut(s) 575, 691, 712, 1470
FriOI GRGCYC 2 cut(s) 302, 577
Fsp4HI GCNGC 9 cut(s) 513, 516, 525, 528, 537, 540, 831, 858, 863
FspBI CTAG 3 cut(s) 114, 227, 756
FspI TGCGCA 1 cut(s) 861
GlaI GCGC 2 cut(s) 641, 861
GluI GCNGC 9 cut(s) 513, 516, 525, 528, 537, 540, 831, 858, 863
GsaI CCCAGC 1 cut(s) 697
GsuI CTGGAG 1 cut(s) 1193
HaeIII GGCC 2 cut(s) 582, 909
HapII CCGG 1 cut(s) 905
HgaI GACGC 1 cut(s) 87
HhaI GCGC 2 cut(s) 642, 862
Hin1I GRCGYC 2 cut(s) 59, 79
Hin1II CATG 5 cut(s) 646, 945, 1052, 1126, 1351
Hin6I GCGC 2 cut(s) 640, 860
HinP1I GCGC 2 cut(s) 640, 860
HincII GTYRAC 1 cut(s) 1081
HindII GTYRAC 1 cut(s) 1081
HindIII AAGCTT 3 cut(s) 673, 1357, 1399
HinfI GANTC 8 cut(s) 239, 787, 793, 1043, 1134, 1462, 1472, 1514
HpaII CCGG 1 cut(s) 905
HphI GGTGA 3 cut(s) 796, 956, 1297
Hpy166II GTNNAC 5 cut(s) 599, 964, 1057, 1081, 1215
Hpy188I TCNGA 7 cut(s) 297, 313, 388, 548, 792, 891, 1408
Hpy188III TCNNGA 8 cut(s) 125, 227, 260, 335, 501, 810, 1123, 1172
Hpy8I GTNNAC 5 cut(s) 599, 964, 1057, 1081, 1215
Hpy99I CGWCG 1 cut(s) 81
HpyAV CCTTC 2 cut(s) 783, 1477
HpyCH4III ACNGT 3 cut(s) 8, 720, 1012
HpyCH4IV ACGT 6 cut(s) 59, 461, 601, 1238, 1305, 1468
HpyCH4V TGCA 5 cut(s) 539, 650, 992, 1057, 1086
HpyF10VI GCNNNNNNNGC 4 cut(s) 521, 524, 533, 536
HpySE526I ACGT 6 cut(s) 59, 461, 601, 1238, 1305, 1468
Hsp92I GRCGYC 2 cut(s) 59, 79
Hsp92II CATG 5 cut(s) 646, 945, 1052, 1126, 1351
HspAI GCGC 2 cut(s) 640, 860
Ksp22I TGATCA 1 cut(s) 891
Kzo9I GATC 2 cut(s) 625, 891
LmnI GCTCC 2 cut(s) 265, 572
Lsp1109I GCAGC 8 cut(s) 499, 511, 514, 523, 551, 842, 844, 874
LweI GCATC 3 cut(s) 130, 734, 1304
MaeI CTAG 3 cut(s) 114, 227, 756
MaeII ACGT 6 cut(s) 59, 461, 601, 1238, 1305, 1468
MaeIII GTNAC 2 cut(s) 457, 933
MalI GATC 2 cut(s) 627, 893
MboI GATC 2 cut(s) 625, 891
MboII GAAGA 8 cut(s) 23, 140, 149, 461, 578, 851, 1169, 1364
MhlI GDGCHC 6 cut(s) 93, 104, 302, 577, 1030, 1059
MluCI AATT 7 cut(s) 174, 289, 304, 567, 867, 1001, 1442
MmeI TCCRAC 2 cut(s) 139, 1386
MroXI GAANNNNTTC 1 cut(s) 797
MseI TTAA 4 cut(s) 1005, 1206, 1281, 1362
MspCI CTTAAG 1 cut(s) 1205
MspI CCGG 1 cut(s) 905
MspR9I CCNGG 4 cut(s) 375, 906, 1071, 1511
Mva1269I GAATGC 3 cut(s) 255, 885, 1294
MvaI CCWGG 3 cut(s) 375, 1071, 1511
MwoI GCNNNNNNNGC 4 cut(s) 521, 524, 533, 536
NciI CCSGG 1 cut(s) 906
NdeII GATC 2 cut(s) 625, 891
NlaIII CATG 5 cut(s) 646, 945, 1052, 1126, 1351
NlaIV GGNNCC 1 cut(s) 1488
NmuCI GTSAC 1 cut(s) 457
NsbI TGCGCA 1 cut(s) 861
NspI RCATGY 1 cut(s) 646
PaeR7I CTCGAG 1 cut(s) 260
PagI TCATGA 1 cut(s) 1122
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PctI GAATGC 3 cut(s) 255, 885, 1294
PdmI GAANNNNTTC 1 cut(s) 797
PfeI GAWTC 8 cut(s) 239, 787, 793, 1043, 1134, 1462, 1472, 1514
PflMI CCANNNNNTGG 1 cut(s) 549
PkrI GCNGC 9 cut(s) 514, 517, 526, 529, 538, 541, 832, 859, 864
Ppu21I YACGTR 1 cut(s) 1469
Psp124BI GAGCTC 2 cut(s) 302, 577
Psp6I CCWGG 3 cut(s) 373, 1069, 1509
PspFI CCCAGC 1 cut(s) 693
PspGI CCWGG 3 cut(s) 373, 1069, 1509
PspN4I GGNNCC 1 cut(s) 1488
PspPI GGNCC 1 cut(s) 907
PstI CTGCAG 1 cut(s) 541
RsaI GTAC 4 cut(s) 5, 10, 1068, 1214
RsaNI GTAC 4 cut(s) 4, 9, 1067, 1213
SacI GAGCTC 2 cut(s) 302, 577
SaqAI TTAA 4 cut(s) 1005, 1206, 1281, 1362
SatI GCNGC 9 cut(s) 513, 516, 525, 528, 537, 540, 831, 858, 863
Sau3AI GATC 2 cut(s) 625, 891
Sau96I GGNCC 1 cut(s) 907
ScrFI CCNGG 4 cut(s) 375, 906, 1071, 1511
SduI GDGCHC 6 cut(s) 93, 104, 302, 577, 1030, 1059
SfaNI GCATC 3 cut(s) 130, 734, 1304
SfcI CTRYAG 1 cut(s) 537
Sfr274I CTCGAG 1 cut(s) 260
SlaI CTCGAG 1 cut(s) 260
SmlI CTYRAG 4 cut(s) 260, 473, 1019, 1205
SmoI CTYRAG 4 cut(s) 260, 473, 1019, 1205
Sse9I AATT 7 cut(s) 174, 289, 304, 567, 867, 1001, 1442
SsiI CCGC 3 cut(s) 97, 479, 516
SspI AATATT 1 cut(s) 430
SspMI CTAG 3 cut(s) 114, 227, 756
SstI GAGCTC 2 cut(s) 302, 577
StyD4I CCNGG 4 cut(s) 373, 904, 1069, 1509
StyI CCWWGG 3 cut(s) 558, 744, 834
TaaI ACNGT 3 cut(s) 8, 720, 1012
TaiI ACGT 6 cut(s) 62, 464, 604, 1241, 1308, 1471
TaqI TCGA 4 cut(s) 49, 179, 261, 1132
TasI AATT 7 cut(s) 174, 289, 304, 567, 867, 1001, 1442
TatI WGTACW 3 cut(s) 3, 8, 1212
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 8 cut(s) 239, 787, 793, 1043, 1134, 1462, 1472, 1514
Tru1I TTAA 4 cut(s) 1005, 1206, 1281, 1362
Tru9I TTAA 4 cut(s) 1005, 1206, 1281, 1362
TscAI CASTG 2 cut(s) 670, 1391
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 8 cut(s) 512, 524, 527, 536, 539, 830, 857, 862
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 765, 1111, 1139
TspGWI ACGGA 2 cut(s) 213, 915
TspRI CASTG 2 cut(s) 670, 1391
Van91I CCANNNNNTGG 1 cut(s) 549
Vha464I CTTAAG 1 cut(s) 1205
VneI GTGCAC 1 cut(s) 1055
XagI CCTNNNNNAGG 1 cut(s) 249
XapI RAATTY 1 cut(s) 174
XbaI TCTAGA 1 cut(s) 226
XceI RCATGY 1 cut(s) 646
XhoI CTCGAG 1 cut(s) 260
XmnI GAANNNNTTC 1 cut(s) 797
XspI CTAG 3 cut(s) 114, 227, 756
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.