Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008039

Physical Location & Seq

Genomic Coordinates Reverse (-)

1010766 .. 1013678

Gene Structure 2913 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G03800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGTCCACCGTTAATCATCACTGCCTCCTCAATTTTCCTCATATCCCACCTTCAATTCCTCCGAATCATCGTCCCAAACTTCTTTCTTCTCTCTCCCTCTATCGAAAACCAGAACGCCTCTTTGCTCTCTCTGCGTCTCTGTCTCTTTCACCAGCAACAATCCATGAATGTTCTTCTTCCTCATCTTCTTCTTCTTCATCGTTCGATAAAGAAGAAACGGAAGACATTGAATCTGTTATTGATGGGTTTTTCTATCTGCTTCGATTGTCTGCTCAATACCACGACGTCGAGGTAACAAAAGCTGTGCACGCTTCGTTTCTTAAGCTCAGAGAAGAAAAAACCCGTCTTGGAAATGCCCTTATCTCTACTTATCTCAAACTTGGTTTCCCTCGTGAAGCTATTCTCGTCTTCGTGTCTCTGTCTTCGCCAACGGTGGTTTCTTACACAGCTCTTATCTCGGGTTTCTCAAGGTTAAACCTTGAAATTGAGGCTCTTAAGGTTTTCTTCAGGATGAGAAAAGCAGGTCTTGTTCAGCCGAATGAGTATACTTTTGTAGCGATTTTGACTGCTTGCGTGAGAGTTTCCCGATTCTCGCTTGGGATTCAGATTCATGGATTGATAGTTAAATCAGGGTTTTTGAATTCTGTGTTTGTTAGTAATTCGCTGATGAGTTTGTATGATAAGGATTCTGGGTCTTCGTGTGATGATGTGCTTAAGTTGTTCGATGAAATTCCTCAGAGAGATGTGGCGTCTTGGAACACTGTGGTTTCGAGTTTAGTGAAAGAGGGCAAGTCTCATAAAGCTTTCGATTTGTTTTATGAGATGAATAGAGTCGAAGGATTTGGAGTTGATAGTTTTACGCTTTCAACGCTTTTGAGCTCTTGTACTGATTCTAGTGTCTTATTGAGAGGTAGAGAACTCCATGGTCGTGCAATTAGGATAGGGTTGATGCAGGAGTTGAGTGTGAACAACGCTCTGATTGGGTTTTATTCTAAATTTTGGGATATGAAAAAGGTAGAGAGTTTATACGAGATGATGATGGCGCAAGATGCTGTTACTTTCACGGAGATGATCACAGCTTACATGTCATTTGGAATGGTGGATTCCGCTGTTGAGATATTCGCGAATGTAACTGAAAAAAACACTATTACGTATAATGCGCTCATGGCTGGGTTCTGTAGAAATGGCCATGGCTTGAAGGCACTAAAATTATTCACTGATATGCTGCAGAGAGGTGTTGAGTTGACGGATTTTAGTTTAACAAGCGCTGTTGATGCTTGTGGTTTAGTTTCAGAGAAGAAAGTAAGCGAACAGATTCACGGGTTTTGTATTAAGTTTGGAACTGCTTTCAACCCTTGTATCCAGACTGCATTGCTTGATATGTGCACAAGGTGTGAAAGGATGGCAGATGCTGAGGAGATGTTTGACCAATGGCCTTCTAATCTCGATAGCTCGAAAGCAACGACGTCTATAATCGGTGGTTACGCTCGGAATGGCTTACCTGATAAGGCTGTATCGCTATTCCATCGCACTCTCTGTGAACAGAAGTTGTTTTTAGATGAAGTTTCGTTGACTTTGATTCTTGCGGTCTGCGGGACATTAGGTTTTCGGGAAATGGGTTATCAGATCCATTGCTATGCTCTTAAAGCTGGGTACTTTTCTGATATAAGCTTGGGAAATTCTTTGATTAGCATGTACGCGAAATGTTGTGACTCAGATGATGCCATAAAGATTTTCAACACTATGCGAGAACATGATGTTATTTCTTGGAACAGCTTGATTTCTTGCTACATCCTTCAAAGAAATGGTGATGAGGCACTGGCTCTATGGTCGAGGATGAATGAGAAAGAGATCAAGCCTGACATAATCACCCTCACTCTTGTTATTTCTGCATTTCGGTATACAGAGTCAAATAAGCTTAGTAGCTGCCGTGATCTGTTTCTCTCCATGAAGACTATCTATGACATTGAACCAACGACTGAACATTACACTGCATTCGTCCGTGTTCTTGGTCATTGGGGTCTTCTTGAAGAAGCGGAAGACACAATAAACTCAATGCCGGTTCAGCCCGAGGTCTCTGTTTTGAGAGCTCTGCTTGATAGCTGCAGAATACATTCAAACACAAGCGTTGCGAAACGAGTAGCAAAGCTTATACTATCTACAAAGCCAGAAACCCCGTCTGAGTACATCCTCAAATCCAACATCTACTCAGCTTCCGGATTCTGGCATCGCTCTGAAATGATAAGAGAGGAAATGCGGGAAAGAGGTTACCGGAAACATCCTGCTAAAAGCTGGATAATCCATGAGAACAAAATACATTCCTTTCACGCGCGTGACACATCCCACCCGCAAGAGAAAGACATATACAGGGGATTGGAGATACTGATAATGGAATGTCTGAAAGTTGGATACGAACCAAACACAGAGTATGTTCTTCAGGAGGTTGATGAGTTTATGAAGAAGAGTTTCTTGTTTCACCACAGCGCGAAACTCGCAGTGACTTATGGAATTCTCTCGAGCAATACTCGGGGCAAGCCGGTTCGGGTTATGAAGAACGTAATGCTCTGTGGTGATTGCCACGAGTTCTTCAAGTATATTTCAGTTGTGGTAAAAAGAGAGATAGTTTTGAGAGATTCCTCAGGGTTTCATCATTTTGTGAATGGCAAGTGTTCTTGTAGAGATCTGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

896

Amino Acids

101.15

Weight (kDa)

6.66

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	143 - 193	1.1e-07	PPR repeat family
PPR	PF01535	146 - 176	5.4e-06	PPR repeat
PPR_2	PF13041	247 - 295	2e-08	PPR repeat family
PPR_2	PF13041	380 - 427	1.2e-11	PPR repeat family
PPR_1	PF12854	381 - 408	3.1e-06	PPR repeat
PPR	PF01535	383 - 413	1.2e-07	PPR repeat
PPR_2	PF13041	586 - 632	8.4e-10	PPR repeat family
E_motif	PF20431	705 - 766	1.8e-10	E motif
DYW_deaminase	PF14432	803 - 896	2e-33	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008039)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03800
fragaria_vesca	FvH4_6g17380 FvH4_6g17380
malus_domestica	MD00G1107500.v1.1
prunus_persica	Prupe.7G121700_v2.0.a1
pyrus_communis	pycom12g09250
rosa_chinensis	RchiOBHm_Chr3g0471571 RchiOBHm_Chr3g0471591
rosa_laevigata	RLG00000024154 RLG00000024162 RLG00000029237
rosa_multiflora	Rmu_sc0008048.1_g000006
rosa_roxburghii	Rroxscaffold_6G00409760
rosa_rugosa	Rorug01G0451400 Rorug03G0118400
rosa_samantha	Rh1AG158300 Rh3AG169000 Rh3BG194700 Rh3CG184900 Rh3CG185400 Rh3DG180100 Rh7CG465600
rosa_wichuraiana	Rw1G013130 Rw3G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	288, 1469
Acc36I	ACCTGC	1 cut(s)	512
AccI	GTMKAC	2 cut(s)	545, 1901
AccII	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
AccIII	TCCGGA	1 cut(s)	2216
AciI	CCGC	6 cut(s)	1107, 1586, 1593, 2036, 2257, 2348
AclWI	GGATC	1 cut(s)	1621
AcoI	YGGCCR	1 cut(s)	1186
AcsI	RAATTY	5 cut(s)	640, 729, 995, 1678, 2508
AcuI	CTGAAG	2 cut(s)	490, 2420
AcyI	GRCGYC	3 cut(s)	285, 749, 1466
AdeI	CACNNNGTG	1 cut(s)	1392
AfaI	GTAC	4 cut(s)	886, 1655, 1697, 2186
AfeI	AGCGCT	1 cut(s)	1267
AfiI	CCNNNNNNNGG	1 cut(s)	2223
AflII	CTTAAG	3 cut(s)	320, 494, 713
AflIII	ACRYGT	1 cut(s)	1083
AjuI	GAANNNNNNNTTGG	2 cut(s)	421, 453
AleI	CACNNNNGTG	1 cut(s)	2331
Alw21I	GWGCWC	4 cut(s)	309, 881, 1388, 2092
Alw26I	GTCTC	5 cut(s)	141, 147, 420, 798, 2080
Alw44I	GTGCAC	2 cut(s)	305, 1384
AlwI	GGATC	1 cut(s)	1621
AlwNI	CAGNNNCTG	1 cut(s)	1412
Ama87I	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
Aor13HI	TCCGGA	1 cut(s)	2216
Aor51HI	AGCGCT	1 cut(s)	1267
AoxI	GGCC	2 cut(s)	1186, 1433
ApaLI	GTGCAC	2 cut(s)	305, 1384
ApeKI	GCWGC	3 cut(s)	1225, 1926, 2103
ApoI	RAATTY	5 cut(s)	640, 729, 995, 1678, 2508
Asp700I	GAANNNNTTC	4 cut(s)	399, 1314, 2113, 2465
AspLEI	GCGC	5 cut(s)	1045, 1162, 1268, 2332, 2486
AsuHPI	GGTGA	5 cut(s)	141, 1820, 1861, 2468, 2582
AvaI	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
AxyI	CCTNAGG	1 cut(s)	2638
BaeGI	GKGCMC	2 cut(s)	309, 1388
BaeI	ACNNNNGTAYC	2 cut(s)	1342, 1375
BalI	TGGCCA	1 cut(s)	1188
BanII	GRGCYC	2 cut(s)	881, 2092
BauI	CACGAG	2 cut(s)	390, 2579
BbsI	GAAGAC	7 cut(s)	228, 400, 414, 687, 1958, 2015, 2046
Bbv12I	GWGCWC	4 cut(s)	309, 881, 1388, 2092
BbvCI	CCTCAGC	1 cut(s)	1413
BbvI	GCAGC	3 cut(s)	1212, 1913, 2090
BccI	CCATC	4 cut(s)	236, 1033, 1396, 1533
BceAI	ACGGC	1 cut(s)	1914
BciVI	GTATCC	2 cut(s)	1370, 2402
BclI	TGATCA	1 cut(s)	1071
BcoDI	GTCTC	5 cut(s)	141, 147, 420, 798, 2080
BfaI	CTAG	1 cut(s)	894
BfmI	CTRYAG	3 cut(s)	1177, 1226, 2104
BfoI	RGCGCY	1 cut(s)	1269
BfrI	CTTAAG	3 cut(s)	320, 494, 713
BfuAI	ACCTGC	1 cut(s)	512
BfuI	GTATCC	2 cut(s)	1370, 2402
BglII	AGATCT	1 cut(s)	2680
BisI	GCNGC	3 cut(s)	1226, 1927, 2104
BlsI	GCNGC	3 cut(s)	1227, 1928, 2105
BmeT110I	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
BmsI	GCATC	6 cut(s)	939, 1039, 1264, 1399, 1711, 2236
BpiI	GAAGAC	7 cut(s)	228, 400, 414, 687, 1958, 2015, 2046
BplI	GAGNNNNNCTC	2 cut(s)	2509, 2541
Bpu10I	CCTNAGC	1 cut(s)	1413
BpuEI	CTTGAG	1 cut(s)	451
BsaAI	YACGTR	1 cut(s)	1152
BsaHI	GRCGYC	3 cut(s)	285, 749, 1466
BsaI	GGTCTC	1 cut(s)	2080
BsaJI	CCNNGG	3 cut(s)	922, 1189, 2070
BsaWI	WCCGGW	2 cut(s)	2216, 2271
Bsc4I	CCNNNNNNNGG	1 cut(s)	2223
Bse118I	RCCGGY	2 cut(s)	2059, 2536
Bse1I	ACTGG	1 cut(s)	1824
Bse21I	CCTNAGG	1 cut(s)	2638
Bse3DI	GCAATG	2 cut(s)	1370, 1630
BseAI	TCCGGA	1 cut(s)	2216
BseDI	CCNNGG	3 cut(s)	922, 1189, 2070
BseGI	GGATG	7 cut(s)	516, 1407, 1791, 1842, 2187, 2278, 2339
BseLI	CCNNNNNNNGG	1 cut(s)	2223
BseMI	GCAATG	2 cut(s)	1370, 1630
BseMII	CTCAG	7 cut(s)	340, 749, 1404, 1728, 2172, 2223, 2652
BseNI	ACTGG	1 cut(s)	1824
BseRI	GAGGAG	2 cut(s)	17, 1430
BseSI	GKGCMC	2 cut(s)	309, 1388
BseXI	GCAGC	3 cut(s)	1212, 1913, 2090
BseYI	CCCAGC	2 cut(s)	1169, 1649
Bsh1236I	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
BshFI	GGCC	2 cut(s)	1188, 1435
BsiHKAI	GWGCWC	4 cut(s)	309, 881, 1388, 2092
BsiHKCI	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
BsiSI	CCGG	4 cut(s)	2060, 2217, 2272, 2537
BslFI	GGGAC	2 cut(s)	57, 1609
BslI	CCNNNNNNNGG	1 cut(s)	2223
BsmAI	GTCTC	5 cut(s)	141, 147, 420, 798, 2080
BsmBI	CGTCTC	1 cut(s)	141
BsmFI	GGGAC	2 cut(s)	57, 1609
BsmI	GAATGC	1 cut(s)	1994
BsnI	GGCC	2 cut(s)	1188, 1435
Bso31I	GGTCTC	1 cut(s)	2080
BsoBI	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
Bsp1286I	GDGCHC	4 cut(s)	309, 881, 1388, 2092
Bsp13I	TCCGGA	1 cut(s)	2216
Bsp143I	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
Bsp19I	CCATGG	2 cut(s)	922, 1189
Bsp68I	TCGCGA	1 cut(s)	1124
BspACI	CCGC	6 cut(s)	1107, 1586, 1593, 2036, 2257, 2348
BspANI	GGCC	2 cut(s)	1188, 1435
BspCNI	CTCAG	7 cut(s)	339, 748, 1405, 1727, 2173, 2222, 2651
BspEI	TCCGGA	1 cut(s)	2216
BspFNI	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
BspMAI	CTGCAG	2 cut(s)	1230, 2108
BspMI	ACCTGC	1 cut(s)	512
BspPI	GGATC	1 cut(s)	1621
BspTI	CTTAAG	3 cut(s)	320, 494, 713
BspTNI	GGTCTC	1 cut(s)	2080
BsrDI	GCAATG	2 cut(s)	1370, 1630
BsrFI	RCCGGY	2 cut(s)	2059, 2536
BsrI	ACTGG	1 cut(s)	1824
BssAI	RCCGGY	2 cut(s)	2059, 2536
BssECI	CCNNGG	3 cut(s)	922, 1189, 2070
BssMI	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
BssNAI	GTATAC	2 cut(s)	546, 1902
BssNI	GRCGYC	3 cut(s)	285, 749, 1466
BssSI	CACGAG	2 cut(s)	390, 2579
BssT1I	CCWWGG	2 cut(s)	922, 1189
Bst1107I	GTATAC	2 cut(s)	546, 1902
Bst2BI	CACGAG	2 cut(s)	390, 2579
Bst4CI	ACNGT	3 cut(s)	10, 433, 763
Bst6I	CTCTTC	1 cut(s)	2456
BstACI	GRCGYC	3 cut(s)	285, 749, 1466
BstAFI	CTTAAG	3 cut(s)	320, 494, 713
BstBAI	YACGTR	1 cut(s)	1152
BstC8I	GCNNGC	3 cut(s)	309, 571, 2534
BstDEI	CTNAG	8 cut(s)	326, 735, 1413, 1714, 1919, 2181, 2209, 2638
BstDSI	CCRYGG	2 cut(s)	922, 1189
BstEII	GGTNACC	1 cut(s)	2267
BstF5I	GGATG	7 cut(s)	516, 1407, 1791, 1842, 2187, 2278, 2339
BstFNI	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
BstH2I	RGCGCY	1 cut(s)	1269
BstHHI	GCGC	5 cut(s)	1045, 1162, 1268, 2332, 2486
BstKTI	GATC	5 cut(s)	1074, 1629, 1854, 1936, 2683
BstMAI	GTCTC	5 cut(s)	141, 147, 420, 798, 2080
BstMBI	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
BstMWI	GCNNNNNNNGC	9 cut(s)	131, 308, 868, 1049, 1166, 1274, 1646, 2065, 2492
BstNSI	RCATGY	2 cut(s)	1087, 1696
BstPI	GGTNACC	1 cut(s)	2267
BstSFI	CTRYAG	3 cut(s)	1177, 1226, 2104
BstSLI	GKGCMC	2 cut(s)	309, 1388
BstSNI	TACGTA	1 cut(s)	1152
BstUI	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
BstV1I	GCAGC	3 cut(s)	1212, 1913, 2090
BstV2I	GAAGAC	7 cut(s)	228, 400, 414, 687, 1958, 2015, 2046
BstX2I	RGATCY	2 cut(s)	1626, 2680
BstYI	RGATCY	2 cut(s)	1626, 2680
BstZ17I	GTATAC	2 cut(s)	546, 1902
Bsu36I	CCTNAGG	1 cut(s)	2638
BsuI	GTATCC	2 cut(s)	1370, 2402
BsuRI	GGCC	2 cut(s)	1188, 1435
BtgI	CCRYGG	2 cut(s)	922, 1189
BtgZI	GCGATG	2 cut(s)	1511, 2213
BtsCI	GGATG	7 cut(s)	516, 1407, 1791, 1842, 2187, 2278, 2339
BtsI	GCAGTG	3 cut(s)	19, 1989, 2502
BtsIMutI	CAGTG	6 cut(s)	19, 759, 1215, 1817, 1989, 2502
BtuMI	TCGCGA	1 cut(s)	1124
BveI	ACCTGC	1 cut(s)	512
Cac8I	GCNNGC	3 cut(s)	309, 571, 2534
CaiI	CAGNNNCTG	1 cut(s)	1412
CfoI	GCGC	5 cut(s)	1045, 1162, 1268, 2332, 2486
Cfr10I	RCCGGY	2 cut(s)	2059, 2536
CseI	GACGC	2 cut(s)	123, 738
Csp6I	GTAC	4 cut(s)	885, 1654, 1696, 2185
CviQI	GTAC	4 cut(s)	885, 1654, 1696, 2185
DdeI	CTNAG	8 cut(s)	326, 735, 1413, 1714, 1919, 2181, 2209, 2638
DpnI	GATC	5 cut(s)	1073, 1628, 1853, 1935, 2682
DpnII	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
DraIII	CACNNNGTG	1 cut(s)	1392
EaeI	YGGCCR	1 cut(s)	1186
Eam1104I	CTCTTC	1 cut(s)	2456
EarI	CTCTTC	1 cut(s)	2456
Ecl136II	GAGCTC	2 cut(s)	879, 2090
Eco105I	TACGTA	1 cut(s)	1152
Eco130I	CCWWGG	2 cut(s)	922, 1189
Eco24I	GRGCYC	2 cut(s)	881, 2092
Eco31I	GGTCTC	1 cut(s)	2080
Eco47III	AGCGCT	1 cut(s)	1267
Eco53kI	GAGCTC	2 cut(s)	879, 2090
Eco57I	CTGAAG	2 cut(s)	490, 2420
Eco81I	CCTNAGG	1 cut(s)	2638
Eco88I	CYCGRG	4 cut(s)	457, 2069, 2515, 2526
Eco91I	GGTNACC	1 cut(s)	2267
EcoICRI	GAGCTC	2 cut(s)	879, 2090
EcoO65I	GGTNACC	1 cut(s)	2267
EcoRI	GAATTC	2 cut(s)	640, 2508
EcoT14I	CCWWGG	2 cut(s)	922, 1189
EcoT38I	GRGCYC	2 cut(s)	881, 2092
ErhI	CCWWGG	2 cut(s)	922, 1189
Esp3I	CGTCTC	1 cut(s)	141
FalI	AAGNNNNNCTT	6 cut(s)	488, 520, 510, 542, 2453, 2485
FaqI	GGGAC	2 cut(s)	57, 1609
FauI	CCCGC	3 cut(s)	1586, 2250, 2355
FbaI	TGATCA	1 cut(s)	1071
FblI	GTMKAC	2 cut(s)	545, 1901
Fnu4HI	GCNGC	3 cut(s)	1226, 1927, 2104
FokI	GGATG	7 cut(s)	523, 1414, 1778, 1849, 2174, 2265, 2326
FriOI	GRGCYC	2 cut(s)	881, 2092
Fsp4HI	GCNGC	3 cut(s)	1226, 1927, 2104
FspBI	CTAG	1 cut(s)	894
GlaI	GCGC	5 cut(s)	1044, 1161, 1267, 2331, 2485
GluI	GCNGC	3 cut(s)	1226, 1927, 2104
GsaI	CCCAGC	2 cut(s)	1173, 1653
HaeII	RGCGCY	1 cut(s)	1269
HaeIII	GGCC	2 cut(s)	1188, 1435
HapII	CCGG	4 cut(s)	2060, 2217, 2272, 2537
HgaI	GACGC	2 cut(s)	123, 738
HhaI	GCGC	5 cut(s)	1045, 1162, 1268, 2332, 2486
Hin1I	GRCGYC	3 cut(s)	285, 749, 1466
Hin6I	GCGC	5 cut(s)	1043, 1160, 1266, 2330, 2484
HinP1I	GCGC	5 cut(s)	1043, 1160, 1266, 2330, 2484
HincII	GTYRAC	2 cut(s)	1245, 1572
HindII	GTYRAC	2 cut(s)	1245, 1572
HindIII	AAGCTT	4 cut(s)	801, 1669, 1916, 2147
HpaII	CCGG	4 cut(s)	2060, 2217, 2272, 2537
HphI	GGTGA	5 cut(s)	141, 1820, 1861, 2468, 2582
Hpy166II	GTNNAC	9 cut(s)	6, 307, 546, 967, 1245, 1386, 1541, 1572, 1902
Hpy8I	GTNNAC	9 cut(s)	6, 307, 546, 967, 1245, 1386, 1541, 1572, 1902
Hpy99I	CGWCG	3 cut(s)	287, 290, 1468
HpyAV	CCTTC	5 cut(s)	60, 830, 1192, 1446, 1805
HpyCH4III	ACNGT	3 cut(s)	10, 433, 763
HpyCH4IV	ACGT	4 cut(s)	285, 1151, 1466, 2556
HpyCH4V	TGCA	9 cut(s)	307, 932, 952, 1228, 1370, 1386, 1892, 1994, 2106
HpyF10VI	GCNNNNNNNGC	9 cut(s)	131, 308, 868, 1049, 1166, 1274, 1646, 2065, 2492
HpyF3I	CTNAG	8 cut(s)	326, 735, 1413, 1714, 1919, 2181, 2209, 2638
HpySE526I	ACGT	4 cut(s)	285, 1151, 1466, 2556
Hsp92I	GRCGYC	3 cut(s)	285, 749, 1466
HspAI	GCGC	5 cut(s)	1043, 1160, 1266, 2330, 2484
Kpn2I	TCCGGA	1 cut(s)	2216
Ksp22I	TGATCA	1 cut(s)	1071
Kzo9I	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
Lsp1109I	GCAGC	3 cut(s)	1212, 1913, 2090
LweI	GCATC	6 cut(s)	939, 1039, 1264, 1399, 1711, 2236
MaeI	CTAG	1 cut(s)	894
MaeII	ACGT	4 cut(s)	285, 1151, 1466, 2556
MaeIII	GTNAC	8 cut(s)	292, 1054, 1129, 1481, 1709, 2267, 2333, 2497
MalI	GATC	5 cut(s)	1073, 1628, 1853, 1935, 2682
MboI	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
MflI	RGATCY	2 cut(s)	1626, 2680
MhlI	GDGCHC	4 cut(s)	309, 881, 1388, 2092
MlsI	TGGCCA	1 cut(s)	1188
MluNI	TGGCCA	1 cut(s)	1188
MlyI	GAGTC	3 cut(s)	840, 1706, 1916
MmeI	TCCRAC	2 cut(s)	2223, 2386
Mox20I	TGGCCA	1 cut(s)	1188
MroI	TCCGGA	1 cut(s)	2216
MroXI	GAANNNNTTC	4 cut(s)	399, 1314, 2113, 2465
MscI	TGGCCA	1 cut(s)	1188
MseI	TTAA	9 cut(s)	12, 321, 473, 495, 624, 714, 1259, 1332, 1644
MslI	CAYNNNNRTG	5 cut(s)	927, 1067, 1220, 1635, 2331
Msp20I	TGGCCA	1 cut(s)	1188
MspA1I	CMGCKG	1 cut(s)	1109
MspCI	CTTAAG	3 cut(s)	320, 494, 713
MspI	CCGG	4 cut(s)	2060, 2217, 2272, 2537
Mva1269I	GAATGC	1 cut(s)	1994
MvnI	CGCG	5 cut(s)	1124, 1700, 2330, 2332, 2486
MwoI	GCNNNNNNNGC	9 cut(s)	131, 308, 868, 1049, 1166, 1274, 1646, 2065, 2492
NcoI	CCATGG	2 cut(s)	922, 1189
NdeII	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
NmuCI	GTSAC	3 cut(s)	1709, 2333, 2497
NruI	TCGCGA	1 cut(s)	1124
NspI	RCATGY	2 cut(s)	1087, 1696
OliI	CACNNNNGTG	1 cut(s)	2331
PaeR7I	CTCGAG	1 cut(s)	2515
PciI	ACATGT	1 cut(s)	1083
PcsI	WCGNNNNNNNCGW	1 cut(s)	1460
PctI	GAATGC	1 cut(s)	1994
PdmI	GAANNNNTTC	4 cut(s)	399, 1314, 2113, 2465
PkrI	GCNGC	3 cut(s)	1227, 1928, 2105
PleI	GAGTC	3 cut(s)	839, 1706, 1915
PpsI	GAGTC	3 cut(s)	839, 1706, 1915
Ppu21I	YACGTR	1 cut(s)	1152
PscI	ACATGT	1 cut(s)	1083
Psp124BI	GAGCTC	2 cut(s)	881, 2092
PspEI	GGTNACC	1 cut(s)	2267
PspFI	CCCAGC	2 cut(s)	1169, 1649
PstI	CTGCAG	2 cut(s)	1230, 2108
PstNI	CAGNNNCTG	1 cut(s)	1412
PsuI	RGATCY	2 cut(s)	1626, 2680
RruI	TCGCGA	1 cut(s)	1124
RsaI	GTAC	4 cut(s)	886, 1655, 1697, 2186
RsaNI	GTAC	4 cut(s)	885, 1654, 1696, 2185
RseI	CAYNNNNRTG	5 cut(s)	927, 1067, 1220, 1635, 2331
SacI	GAGCTC	2 cut(s)	881, 2092
SaqAI	TTAA	9 cut(s)	12, 321, 473, 495, 624, 714, 1259, 1332, 1644
SatI	GCNGC	3 cut(s)	1226, 1927, 2104
Sau3AI	GATC	5 cut(s)	1071, 1626, 1851, 1933, 2680
SchI	GAGTC	3 cut(s)	840, 1706, 1916
SduI	GDGCHC	4 cut(s)	309, 881, 1388, 2092
SfaNI	GCATC	6 cut(s)	939, 1039, 1264, 1399, 1711, 2236
SfcI	CTRYAG	3 cut(s)	1177, 1226, 2104
Sfr274I	CTCGAG	1 cut(s)	2515
SlaI	CTCGAG	1 cut(s)	2515
SmiMI	CAYNNNNRTG	5 cut(s)	927, 1067, 1220, 1635, 2331
SmlI	CTYRAG	5 cut(s)	320, 466, 494, 713, 2515
SmoI	CTYRAG	5 cut(s)	320, 466, 494, 713, 2515
SnaBI	TACGTA	1 cut(s)	1152
SsiI	CCGC	6 cut(s)	1107, 1586, 1593, 2036, 2257, 2348
SspMI	CTAG	1 cut(s)	894
SstI	GAGCTC	2 cut(s)	881, 2092
StyI	CCWWGG	2 cut(s)	922, 1189
TaaI	ACNGT	3 cut(s)	10, 433, 763
TaiI	ACGT	4 cut(s)	288, 1154, 1469, 2559
TatI	WGTACW	2 cut(s)	884, 2184
Tru1I	TTAA	9 cut(s)	12, 321, 473, 495, 624, 714, 1259, 1332, 1644
Tru9I	TTAA	9 cut(s)	12, 321, 473, 495, 624, 714, 1259, 1332, 1644
TscAI	CASTG	6 cut(s)	26, 766, 1222, 1824, 1996, 2502
TseFI	GTSAC	3 cut(s)	1709, 2333, 2497
TseI	GCWGC	3 cut(s)	1225, 1926, 2103
Tsp45I	GTSAC	3 cut(s)	1709, 2333, 2497
TspGWI	ACGGA	4 cut(s)	233, 1079, 1262, 1991
TspRI	CASTG	6 cut(s)	26, 766, 1222, 1824, 1996, 2502
Vha464I	CTTAAG	3 cut(s)	320, 494, 713
VneI	GTGCAC	2 cut(s)	305, 1384
XapI	RAATTY	5 cut(s)	640, 729, 995, 1678, 2508
XceI	RCATGY	2 cut(s)	1087, 1696
XhoI	CTCGAG	1 cut(s)	2515
XmiI	GTMKAC	2 cut(s)	545, 1901
XmnI	GAANNNNTTC	4 cut(s)	399, 1314, 2113, 2465
XspI	CTAG	1 cut(s)	894
ZraI	GACGTC	2 cut(s)	286, 1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.