Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000696

Physical Location & Seq

Genomic Coordinates Reverse (-)

54643696 .. 54649428

Gene Structure 5733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0451400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGATGATGATCGAGTCAGCCGTGGCCGTACGATTCAACTCCGCCGCCGCCAATGTCTGCTCCTCCACCGCCGTCCCTTGTTTTCGTCCACGGTGGAGCTCGGAGGAGCTGACCGGAGCAGTCCACGTCACCTCTTGCCGGCTTGCGTACTCCGGCGGATGGGGTAGGATTCGAAGATCAAAGCATTATGATTCGGTTGCGAAAAGGAGCAATTGTGTAAAGAATGGGATTCGAGCGGCCACGGAGCAGTTAGGGCCTGGTTCGGAGCCTGTGAAGCCGAATGGGAGGCCGCAGTACCATCCGTTTGAGGATATTGCTGAAGCAACATTGGATAATGTTGGGGCTGCAAGACTTACATCTGCAGAATCTGCTAGGACCATTATTGAGGTTAATAGCAAAGCCACGCTCATGTTTTCGAGTCTGATTAATGATGAGGTTCATGAAAATATTATGTGTCCTGATTTGCCTTATGTAACTGATGAACATGGAAATATATACTTTCAAGTGAAGGATGGTGAAGACAATGCGTCTATGCAATCCATAACTTCAGAAAATAACTTTGTGCAAGTTATTATTGGCTTAGATACTATGGAAATGATCAATGAGATGGAAGTACCAGAAATTGATTTTGGAATTGATGAGATTGAAGGTGAATATAGTGATGGTGAAGATGACAATGATGAGGACGACGACGACGATGAAGATGGTGACGATGATTCGGATTGGGTTTCCGTTCTTGACGACGAAGATGAAGAAGATGACGATGAAGATGACGAGACTCTTGGAGACTGGGCAAAGCTGGAGACTATGCGTTATTCTCACCCAATGTATTTTGCCAAGAAGCTGACTGAGGTTGCTTCAGATGATCCTATAGATTGGGCAGAGCAGGCTCCAGCTAGTTTGGCAATTCAGGGGCTTCTAAGACCTGCATATATTGAAGAACATACTGTCATAAAAAAGCATATGTCAGATCATGAGTCCAATGATGATGAAAAACAAGTTGGGAGAACTGTAGAAGATGATTTAGAAGAGCCTGATAAGATCAATGGCCATGAATCAGGATCTTTCAAGGGCAGTCCAATCCGGGCAGAGGAATCAGACAATGAGAAGGGTGAAATACCAAAGAATGGGACTACTTTTTACAAACTGGAGATTGTTAAGATTCAGTTGTTTTCATCACATGGACATCAGAGTGTTGTTGAAGTAGAAGACTTCGTAAAAGCTCAGCCCGATGCCATTGCACACTCAGCCGCTAAAATTATATCTCGTCTGAAAGCAGGTGGAGAAAAGACCACACAAGCTCTCAAGTCCCTTTGTTGGAGACTAAAGGGTATTCAAGTTGAGGAGGTAGTACTTACCAGTGTAGATTCTCTTGGATTTGACTTGAGGGTTTGCTCAGGAACACAAGTTCAGACGTTGCGGTTTGCACTAAATGCACGGGCCACTTCTGAGTATAGTGCTGAGAGACAACTTAATGATCTGCTATTCCCGAGGACACAGCACACGCCACAGAAAGTAAAGCAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

509

Amino Acids

56.61

Weight (kDa)

4.48

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000696)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1268
Acc36I	ACCTGC	2 cut(s)	934, 1268
AccB7I	CCANNNNNTGG	1 cut(s)	1127
AccBSI	CCGCTC	1 cut(s)	236
AciI	CCGC	9 cut(s)	42, 45, 48, 69, 156, 236, 290, 1251, 1420
AclWI	GGATC	2 cut(s)	860, 1069
AcoI	YGGCCR	3 cut(s)	24, 237, 1048
AcuI	CTGAAG	3 cut(s)	339, 531, 843
AfaI	GTAC	5 cut(s)	30, 149, 296, 615, 1353
AfiI	CCNNNNNNNGG	5 cut(s)	138, 159, 1090, 1127, 1317
AgsI	TTSAA	7 cut(s)	37, 503, 647, 938, 1069, 1202, 1337
AhdI	GACNNNNNGTC	1 cut(s)	526
AjiI	CACGTC	1 cut(s)	127
AjnI	CCWGG	1 cut(s)	256
AjuI	GAANNNNNNNTTGG	4 cut(s)	612, 644, 984, 1016
AloI	GAACNNNNNNTCC	2 cut(s)	1392, 1424
AluBI	AGCT	7 cut(s)	99, 109, 799, 844, 896, 1223, 1301
AluI	AGCT	7 cut(s)	99, 109, 799, 844, 896, 1223, 1301
Alw21I	GWGCWC	1 cut(s)	101
Alw26I	GTCTC	5 cut(s)	770, 780, 797, 1315, 1459
AlwI	GGATC	2 cut(s)	860, 1069
AlwNI	CAGNNNCTG	1 cut(s)	368
Ama87I	CYCGRG	1 cut(s)	1489
AoxI	GGCC	6 cut(s)	24, 237, 254, 287, 1048, 1440
ApeKI	GCWGC	1 cut(s)	344
AseI	ATTAAT	1 cut(s)	426
AspS9I	GGNCC	3 cut(s)	254, 375, 1440
AsuC2I	CCSGG	1 cut(s)	1085
AsuHPI	GGTGA	7 cut(s)	121, 527, 662, 677, 719, 812, 1124
AsuII	TTCGAA	1 cut(s)	172
AvaI	CYCGRG	1 cut(s)	1489
AvaII	GGWCC	1 cut(s)	375
BalI	TGGCCA	1 cut(s)	1050
BanII	GRGCYC	1 cut(s)	101
BbsI	GAAGAC	2 cut(s)	525, 1215
Bbv12I	GWGCWC	1 cut(s)	101
BbvI	GCAGC	1 cut(s)	331
BccI	CCATC	6 cut(s)	153, 306, 506, 601, 656, 698
BceAI	ACGGC	3 cut(s)	5, 11, 56
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	1 cut(s)	258
BclI	TGATCA	1 cut(s)	597
BcnI	CCSGG	1 cut(s)	1085
BcoDI	GTCTC	5 cut(s)	770, 780, 797, 1315, 1459
BfaI	CTAG	2 cut(s)	372, 897
BfmI	CTRYAG	3 cut(s)	360, 870, 1011
BfuAI	ACCTGC	2 cut(s)	934, 1268
BisI	GCNGC	6 cut(s)	45, 48, 237, 290, 345, 1251
BlpI	GCTNAGC	1 cut(s)	1224
BlsI	GCNGC	6 cut(s)	46, 49, 238, 291, 346, 1252
BmcAI	AGTACT	1 cut(s)	1353
Bme1390I	CCNGG	2 cut(s)	258, 1085
Bme18I	GGWCC	1 cut(s)	375
BmeRI	GACNNNNNGTC	1 cut(s)	526
BmeT110I	CYCGRG	1 cut(s)	1489
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	3 cut(s)	254, 375, 1440
BmiI	GGNNCC	2 cut(s)	267, 891
BmrFI	CCNGG	2 cut(s)	258, 1085
BmrI	ACTGGG	1 cut(s)	799
BmsI	GCATC	1 cut(s)	1222
BmuI	ACTGGG	1 cut(s)	799
BpiI	GAAGAC	2 cut(s)	525, 1215
BpmI	CTGGAG	3 cut(s)	821, 876, 1169
Bpu10I	CCTNAGC	1 cut(s)	1396
Bpu1102I	GCTNAGC	1 cut(s)	1224
Bpu14I	TTCGAA	1 cut(s)	172
BpuEI	CTTGAG	2 cut(s)	1289, 1405
BpuMI	CCSGG	1 cut(s)	1085
BsaBI	GATNNNNATC	1 cut(s)	8
BsaJI	CCNNGG	4 cut(s)	21, 89, 240, 1490
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	2 cut(s)	199, 229
Bsc4I	CCNNNNNNNGG	5 cut(s)	138, 159, 1090, 1127, 1317
Bse118I	RCCGGY	1 cut(s)	138
Bse1I	ACTGG	3 cut(s)	794, 1152, 1359
Bse3DI	GCAATG	1 cut(s)	1236
Bse8I	GATNNNNATC	1 cut(s)	8
BseBI	CCWGG	1 cut(s)	258
BseDI	CCNNGG	4 cut(s)	21, 89, 240, 1490
BseGI	GGATG	3 cut(s)	164, 298, 517
BseJI	GATNNNNATC	1 cut(s)	8
BseLI	CCNNNNNNNGG	5 cut(s)	138, 159, 1090, 1127, 1317
BseMI	GCAATG	1 cut(s)	1236
BseMII	CTCAG	6 cut(s)	840, 1238, 1260, 1410, 1440, 1452
BseNI	ACTGG	3 cut(s)	794, 1152, 1359
BseRI	GAGGAG	3 cut(s)	52, 119, 1358
BseXI	GCAGC	1 cut(s)	331
BshFI	GGCC	6 cut(s)	26, 239, 256, 289, 1050, 1442
BsiHKAI	GWGCWC	1 cut(s)	101
BsiHKCI	CYCGRG	1 cut(s)	1489
BsiSI	CCGG	4 cut(s)	114, 139, 153, 1084
BsiWI	CGTACG	1 cut(s)	28
BslFI	GGGAC	3 cut(s)	59, 1144, 1294
BslI	CCNNNNNNNGG	5 cut(s)	138, 159, 1090, 1127, 1317
BsmAI	GTCTC	5 cut(s)	770, 780, 797, 1315, 1459
BsmFI	GGGAC	3 cut(s)	59, 1144, 1294
BsnI	GGCC	6 cut(s)	26, 239, 256, 289, 1050, 1442
BsoBI	CYCGRG	1 cut(s)	1489
Bsp119I	TTCGAA	1 cut(s)	172
Bsp1286I	GDGCHC	1 cut(s)	101
Bsp143I	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
Bsp1720I	GCTNAGC	1 cut(s)	1224
BspACI	CCGC	9 cut(s)	42, 45, 48, 69, 156, 236, 290, 1251, 1420
BspANI	GGCC	6 cut(s)	26, 239, 256, 289, 1050, 1442
BspCNI	CTCAG	6 cut(s)	841, 1237, 1259, 1409, 1441, 1453
BspHI	TCATGA	2 cut(s)	439, 973
BspLI	GGNNCC	2 cut(s)	267, 891
BspMAI	CTGCAG	1 cut(s)	364
BspMI	ACCTGC	2 cut(s)	934, 1268
BspPI	GGATC	2 cut(s)	860, 1069
BspQI	GCTCTTC	1 cut(s)	1023
BspT104I	TTCGAA	1 cut(s)	172
BsrBI	CCGCTC	1 cut(s)	236
BsrDI	GCAATG	1 cut(s)	1236
BsrFI	RCCGGY	1 cut(s)	138
BsrI	ACTGG	3 cut(s)	794, 1152, 1359
BssAI	RCCGGY	1 cut(s)	138
BssECI	CCNNGG	4 cut(s)	21, 89, 240, 1490
BssMI	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
Bst2UI	CCWGG	1 cut(s)	258
Bst4CI	ACNGT	3 cut(s)	93, 949, 1012
Bst6I	CTCTTC	1 cut(s)	1023
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1433
BstBI	TTCGAA	1 cut(s)	172
BstC8I	GCNNGC	3 cut(s)	140, 144, 888
BstDEI	CTNAG	8 cut(s)	580, 849, 920, 1224, 1246, 1396, 1449, 1461
BstDSI	CCRYGG	3 cut(s)	21, 89, 240
BstF5I	GGATG	3 cut(s)	164, 298, 517
BstKTI	GATC	8 cut(s)	12, 179, 600, 868, 973, 1044, 1064, 1480
BstMAI	GTCTC	5 cut(s)	770, 780, 797, 1315, 1459
BstMBI	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
BstMWI	GCNNNNNNNGC	7 cut(s)	253, 274, 368, 887, 902, 1247, 1433
BstNI	CCWGG	1 cut(s)	258
BstSCI	CCNGG	2 cut(s)	256, 1083
BstSFI	CTRYAG	3 cut(s)	360, 870, 1011
BstV1I	GCAGC	1 cut(s)	331
BstV2I	GAAGAC	2 cut(s)	525, 1215
BstX2I	RGATCY	1 cut(s)	1061
BstYI	RGATCY	1 cut(s)	1061
BsuRI	GGCC	6 cut(s)	26, 239, 256, 289, 1050, 1442
BtgI	CCRYGG	3 cut(s)	21, 89, 240
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	3 cut(s)	164, 298, 517
BtsIMutI	CAGTG	1 cut(s)	1366
BveI	ACCTGC	2 cut(s)	934, 1268
Cac8I	GCNNGC	3 cut(s)	140, 144, 888
CaiI	CAGNNNCTG	1 cut(s)	368
CciI	TCATGA	2 cut(s)	439, 973
Cfr10I	RCCGGY	1 cut(s)	138
Cfr13I	GGNCC	3 cut(s)	254, 375, 1440
CseI	GACGC	1 cut(s)	516
Csp6I	GTAC	5 cut(s)	29, 148, 295, 614, 1352
CviAII	CATG	6 cut(s)	409, 440, 485, 974, 1052, 1181
CviQI	GTAC	5 cut(s)	29, 148, 295, 614, 1352
DdeI	CTNAG	8 cut(s)	580, 849, 920, 1224, 1246, 1396, 1449, 1461
DpnI	GATC	8 cut(s)	11, 178, 599, 867, 972, 1043, 1063, 1479
DpnII	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
DriI	GACNNNNNGTC	1 cut(s)	526
EaeI	YGGCCR	3 cut(s)	24, 237, 1048
Eam1104I	CTCTTC	1 cut(s)	1023
Eam1105I	GACNNNNNGTC	1 cut(s)	526
EarI	CTCTTC	1 cut(s)	1023
EciI	GGCGGA	2 cut(s)	31, 171
Ecl136II	GAGCTC	1 cut(s)	99
Eco24I	GRGCYC	1 cut(s)	101
Eco47I	GGWCC	1 cut(s)	375
Eco53kI	GAGCTC	1 cut(s)	99
Eco57I	CTGAAG	3 cut(s)	339, 531, 843
Eco88I	CYCGRG	1 cut(s)	1489
EcoICRI	GAGCTC	1 cut(s)	99
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRII	CCWGG	1 cut(s)	256
EcoT38I	GRGCYC	1 cut(s)	101
FaeI	CATG	6 cut(s)	412, 443, 488, 977, 1055, 1184
FaqI	GGGAC	3 cut(s)	59, 1144, 1294
FatI	CATG	6 cut(s)	408, 439, 484, 973, 1051, 1180
FauNDI	CATATG	1 cut(s)	963
FbaI	TGATCA	1 cut(s)	597
Fnu4HI	GCNGC	6 cut(s)	45, 48, 237, 290, 345, 1251
FokI	GGATG	3 cut(s)	171, 285, 524
FriOI	GRGCYC	1 cut(s)	101
Fsp4HI	GCNGC	6 cut(s)	45, 48, 237, 290, 345, 1251
FspBI	CTAG	2 cut(s)	372, 897
GluI	GCNGC	6 cut(s)	45, 48, 237, 290, 345, 1251
GsuI	CTGGAG	3 cut(s)	821, 876, 1169
HaeIII	GGCC	6 cut(s)	26, 239, 256, 289, 1050, 1442
HapII	CCGG	4 cut(s)	114, 139, 153, 1084
HgaI	GACGC	1 cut(s)	516
Hin1II	CATG	6 cut(s)	412, 443, 488, 977, 1055, 1184
HpaII	CCGG	4 cut(s)	114, 139, 153, 1084
HphI	GGTGA	7 cut(s)	121, 527, 662, 677, 719, 812, 1124
Hpy166II	GTNNAC	2 cut(s)	89, 124
Hpy188III	TCNNGA	7 cut(s)	440, 458, 737, 974, 1059, 1398, 1489
Hpy8I	GTNNAC	2 cut(s)	89, 124
Hpy99I	CGWCG	4 cut(s)	692, 695, 698, 746
HpyAV	CCTTC	3 cut(s)	502, 641, 1102
HpyCH4III	ACNGT	3 cut(s)	93, 949, 1012
HpyCH4IV	ACGT	2 cut(s)	126, 1415
HpyCH4V	TGCA	8 cut(s)	347, 362, 535, 565, 929, 1241, 1427, 1436
HpyF10VI	GCNNNNNNNGC	7 cut(s)	253, 274, 368, 887, 902, 1247, 1433
HpyF3I	CTNAG	8 cut(s)	580, 849, 920, 1224, 1246, 1396, 1449, 1461
HpySE526I	ACGT	2 cut(s)	126, 1415
Hsp92II	CATG	6 cut(s)	412, 443, 488, 977, 1055, 1184
KroI	GCCGGC	1 cut(s)	138
KroNI	GCCGGC	1 cut(s)	140
Ksp22I	TGATCA	1 cut(s)	597
Kzo9I	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
LguI	GCTCTTC	1 cut(s)	1023
LmnI	GCTCC	8 cut(s)	65, 96, 106, 116, 207, 244, 265, 895
Lsp1109I	GCAGC	1 cut(s)	331
LweI	GCATC	1 cut(s)	1222
MaeI	CTAG	2 cut(s)	372, 897
MaeII	ACGT	2 cut(s)	126, 1415
MaeIII	GTNAC	3 cut(s)	127, 472, 707
MalI	GATC	8 cut(s)	11, 178, 599, 867, 972, 1043, 1063, 1479
MbiI	CCGCTC	1 cut(s)	236
MboI	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
MfeI	CAATTG	1 cut(s)	211
MflI	RGATCY	1 cut(s)	1061
MhlI	GDGCHC	1 cut(s)	101
MlsI	TGGCCA	1 cut(s)	1050
MluCI	AATT	5 cut(s)	211, 621, 633, 906, 1257
MluNI	TGGCCA	1 cut(s)	1050
MlyI	GAGTC	4 cut(s)	23, 427, 772, 986
MmeI	TCCRAC	1 cut(s)	1298
Mox20I	TGGCCA	1 cut(s)	1050
MroNI	GCCGGC	1 cut(s)	138
MscI	TGGCCA	1 cut(s)	1050
MseI	TTAA	5 cut(s)	390, 426, 1158, 1473, 1528
MslI	CAYNNNNRTG	2 cut(s)	407, 1191
Msp20I	TGGCCA	1 cut(s)	1050
MspI	CCGG	4 cut(s)	114, 139, 153, 1084
MspR9I	CCNGG	2 cut(s)	258, 1085
MunI	CAATTG	1 cut(s)	211
MvaI	CCWGG	1 cut(s)	258
MwoI	GCNNNNNNNGC	7 cut(s)	253, 274, 368, 887, 902, 1247, 1433
NaeI	GCCGGC	1 cut(s)	140
NciI	CCSGG	1 cut(s)	1085
NdeI	CATATG	1 cut(s)	963
NdeII	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
NgoMIV	GCCGGC	1 cut(s)	138
NlaIII	CATG	6 cut(s)	412, 443, 488, 977, 1055, 1184
NlaIV	GGNNCC	2 cut(s)	267, 891
NmuCI	GTSAC	2 cut(s)	127, 707
NspV	TTCGAA	1 cut(s)	172
PagI	TCATGA	2 cut(s)	439, 973
PaqCI	CACCTGC	1 cut(s)	1268
PciSI	GCTCTTC	1 cut(s)	1023
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 693
PdiI	GCCGGC	1 cut(s)	140
Pfl23II	CGTACG	1 cut(s)	28
PflMI	CCANNNNNTGG	1 cut(s)	1127
PkrI	GCNGC	6 cut(s)	46, 49, 238, 291, 346, 1252
PleI	GAGTC	4 cut(s)	22, 426, 772, 985
PpsI	GAGTC	4 cut(s)	22, 426, 772, 985
PshBI	ATTAAT	1 cut(s)	426
Psp124BI	GAGCTC	1 cut(s)	101
Psp6I	CCWGG	1 cut(s)	256
PspGI	CCWGG	1 cut(s)	256
PspLI	CGTACG	1 cut(s)	28
PspN4I	GGNNCC	2 cut(s)	267, 891
PspPI	GGNCC	3 cut(s)	254, 375, 1440
PstI	CTGCAG	1 cut(s)	364
PstNI	CAGNNNCTG	1 cut(s)	368
PsuI	RGATCY	1 cut(s)	1061
RsaI	GTAC	5 cut(s)	30, 149, 296, 615, 1353
RsaNI	GTAC	5 cut(s)	29, 148, 295, 614, 1352
RseI	CAYNNNNRTG	2 cut(s)	407, 1191
SacI	GAGCTC	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	1023
SaqAI	TTAA	5 cut(s)	390, 426, 1158, 1473, 1528
SatI	GCNGC	6 cut(s)	45, 48, 237, 290, 345, 1251
Sau3AI	GATC	8 cut(s)	9, 176, 597, 865, 970, 1041, 1061, 1477
Sau96I	GGNCC	3 cut(s)	254, 375, 1440
ScaI	AGTACT	1 cut(s)	1353
SchI	GAGTC	4 cut(s)	23, 427, 772, 986
ScrFI	CCNGG	2 cut(s)	258, 1085
SduI	GDGCHC	1 cut(s)	101
SfaNI	GCATC	1 cut(s)	1222
SfcI	CTRYAG	3 cut(s)	360, 870, 1011
SfuI	TTCGAA	1 cut(s)	172
SinI	GGWCC	1 cut(s)	375
SmiMI	CAYNNNNRTG	2 cut(s)	407, 1191
SmlI	CTYRAG	2 cut(s)	1304, 1384
SmoI	CTYRAG	2 cut(s)	1304, 1384
Sse9I	AATT	5 cut(s)	211, 621, 633, 906, 1257
SsiI	CCGC	9 cut(s)	42, 45, 48, 69, 156, 236, 290, 1251, 1420
SspI	AATATT	1 cut(s)	448
SspMI	CTAG	2 cut(s)	372, 897
SstI	GAGCTC	1 cut(s)	101
StyD4I	CCNGG	2 cut(s)	256, 1083
TaaI	ACNGT	3 cut(s)	93, 949, 1012
TaiI	ACGT	2 cut(s)	129, 1418
TaqI	TCGA	4 cut(s)	12, 172, 232, 416
TasI	AATT	5 cut(s)	211, 621, 633, 906, 1257
TatI	WGTACW	1 cut(s)	1351
TauI	GCSGC	5 cut(s)	47, 50, 239, 292, 1253
Tru1I	TTAA	5 cut(s)	390, 426, 1158, 1473, 1528
Tru9I	TTAA	5 cut(s)	390, 426, 1158, 1473, 1528
TscAI	CASTG	1 cut(s)	1366
TseFI	GTSAC	2 cut(s)	127, 707
TseI	GCWGC	1 cut(s)	344
Tsp45I	GTSAC	2 cut(s)	127, 707
TspDTI	ATGAA	9 cut(s)	428, 456, 495, 714, 765, 780, 1005, 1068, 1164
TspGWI	ACGGA	3 cut(s)	257, 291, 721
TspRI	CASTG	1 cut(s)	1366
Van91I	CCANNNNNTGG	1 cut(s)	1127
VpaK11BI	GGWCC	1 cut(s)	375
VspI	ATTAAT	1 cut(s)	426
XspI	CTAG	2 cut(s)	372, 897
ZrmI	AGTACT	1 cut(s)	1353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.