Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000696

Physical Location & Seq

Genomic Coordinates Forward (+)

60546469 .. 60551213

Gene Structure 4745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0474300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGCTACTGAAATGAGGTACACTCCACTCTGTTTGTTCTGTATATTAGCTGCAACATTAGTCCTCATCATCATTTACTTGAAGCACAAGAAACACTTTGGCACAAGCAAGAGAAAACTACCACCTGGGGAAATGGGCCTTCCCTGGATAGGCCAAACAATGGAGTTCTACAGAGCTCAACAGAAAAACAGTTTGTTCGATGACTTTGTTCAGCCCCGGATTGCAAAACATGGCAAAATCTTCACAACACATCTAATGGGATCACCAACTGTGATTGTGAATGGAGCCAATGCTAACAGATTCCTGTTGTCCAATGAGTTCAAGCTGGTGATAAGTTCGTGGCCTTCAGCATCGGTTCAGCTTATGGGGAAGGACTCCATCATGGAAAAGCAAGGGGAGAGGCACCGCTGCCTTCGCGGGCTTATAGGCTCAAGCCTTGGCCAGGCGGGGCTTGAGACTTTAGTGCCTAAAATATGTAACTTAATGAAGTTGCACTTGGACACAAAATGGAAAGGCCAGGATGAGATCAGCCTGTATCATGCAACGAAAGTCTTGACTTTTTCGATAGTGTTTGAGTGCTTGTTGGGGATCAATGTGAAGGCAGATATGTTGGGAACATTTGAGAGGGTTTTGGAAGGGGTTTTTGCAGCACCAATTAATTTTCCGGGGTCCAGGTTTTGGCGAGCAAAGAAAGCGAGGAAGGAGATTGGGAAAATACTGGTTAAAGTAGTAAGAGAGAAGAAGAAGCACATGGAAGAAAGCAAGAAAGAAGAAGAAGAGCAAGGAGGGATGTTGCTGTCTCGATTAGTGGCAGGGATGATTCGAGGAGAAATTACCGAAGAGGAGGTTGTTGATAATGTGGTCTTGCTGGTGTTCGCAGCTCATGATACTACTTCTTTTGCCATTGCCATGACATTCAAAATGTTGGCTCAGCATCCATATTGCCACAGTTTCCTACTTAAAGAACATGCTGAGATAATAAGAAGCAAAAAACCTGGTGATCAAAATCTGACATTGGATGATACGAAGAACATGAAGTACACCTGGCAGGTTGCTCGCGAAAGCATGCGTCTCTTCCCTCCTATCTTCGGCTCTTTCAGGAAAGCCATTGCTGATATTGAATATGAAGGATTCACTATTCCACAAGGATGGAAGGTGTTGTGGACAACATATGGAACGCATTACAATTCAGAATATTTTGAAGATCCTTCGAGTTTCAATCCAAGCCGGTTTGAGGAGCATGTTCCACCATATGCCTTTCTGGCATTCGGAGGAGGGCCAAGAGTTTGTGCAGGGTACCAACTTGCTAAGCTGAACATCCTCATTTTCATGCATTTCATCGTGACTCGTTATGACTGGTCTTTGCTATATCCTGATGAGCCTATATCTATGGATCCTCTTCCATTTCCTTCATATGGAATGCCTATTAAAATTACTCCAAAGTTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

483

Amino Acids

55.08

Weight (kDa)

9.11

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	41 - 467	4.3e-60	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000696)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1039
Acc65I	GGTACC	1 cut(s)	1296
AccB1I	GGYRCC	2 cut(s)	402, 1296
AccB7I	CCANNNNNTGG	2 cut(s)	160, 678
AccII	CGCG	2 cut(s)	417, 1059
AciI	CCGC	3 cut(s)	406, 417, 446
AclWI	GGATC	5 cut(s)	268, 596, 1199, 1388, 1401
AcoI	YGGCCR	1 cut(s)	439
AcuI	CTGAAG	1 cut(s)	330
AfaI	GTAC	3 cut(s)	20, 1040, 1298
AfiI	CCNNNNNNNGG	7 cut(s)	149, 160, 442, 678, 1088, 1234, 1415
AgsI	TTSAA	6 cut(s)	82, 322, 919, 1121, 1202, 1219
AjnI	CCWGG	7 cut(s)	124, 143, 441, 516, 671, 994, 1043
AjuI	GAANNNNNNNTTGG	2 cut(s)	479, 511
AluBI	AGCT	6 cut(s)	50, 176, 325, 361, 881, 1312
AluI	AGCT	6 cut(s)	50, 176, 325, 361, 881, 1312
Alw21I	GWGCWC	1 cut(s)	178
Alw26I	GTCTC	3 cut(s)	449, 804, 1076
AlwI	GGATC	5 cut(s)	268, 596, 1199, 1388, 1401
AoxI	GGCC	6 cut(s)	136, 151, 341, 439, 514, 1277
ApeKI	GCWGC	4 cut(s)	50, 408, 647, 878
AseI	ATTAAT	1 cut(s)	657
Asp718I	GGTACC	1 cut(s)	1296
AspS9I	GGNCC	3 cut(s)	136, 669, 1277
AsuC2I	CCSGG	2 cut(s)	217, 666
AsuHPI	GGTGA	3 cut(s)	255, 340, 1010
AvaII	GGWCC	1 cut(s)	669
BalI	TGGCCA	1 cut(s)	441
BamHI	GGATCC	1 cut(s)	1393
BanI	GGYRCC	2 cut(s)	402, 1296
BanII	GRGCYC	1 cut(s)	178
Bbv12I	GWGCWC	1 cut(s)	178
BbvI	GCAGC	4 cut(s)	37, 395, 659, 890
BccI	CCATC	2 cut(s)	386, 1143
BcgI	CGANNNNNNTGC	2 cut(s)	1037, 1071
BciT130I	CCWGG	7 cut(s)	126, 145, 443, 518, 673, 996, 1045
BclI	TGATCA	1 cut(s)	1000
BcnI	CCSGG	2 cut(s)	217, 666
BcoDI	GTCTC	3 cut(s)	449, 804, 1076
BfmI	CTRYAG	1 cut(s)	169
BfuAI	ACCTGC	1 cut(s)	1039
BglI	GCCNNNNNGGC	1 cut(s)	1262
BisI	GCNGC	4 cut(s)	51, 409, 648, 879
BlpI	GCTNAGC	2 cut(s)	930, 1308
BlsI	GCNGC	4 cut(s)	52, 410, 649, 880
Bme1390I	CCNGG	9 cut(s)	126, 145, 217, 443, 518, 666, 673, 996, 1045
Bme18I	GGWCC	1 cut(s)	669
BmgT120I	GGNCC	3 cut(s)	136, 669, 1277
BmiI	GGNNCC	5 cut(s)	286, 404, 670, 1298, 1395
BmrFI	CCNGG	9 cut(s)	126, 145, 217, 443, 518, 666, 673, 996, 1045
BmsI	GCATC	2 cut(s)	359, 943
BplI	GAGNNNNNCTC	2 cut(s)	7, 39
Bpu1102I	GCTNAGC	2 cut(s)	930, 1308
BpuEI	CTTGAG	2 cut(s)	415, 473
BpuMI	CCSGG	2 cut(s)	217, 666
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaJI	CCNNGG	5 cut(s)	125, 143, 215, 436, 665
Bsc4I	CCNNNNNNNGG	7 cut(s)	149, 160, 442, 678, 1088, 1234, 1415
Bse118I	RCCGGY	1 cut(s)	1227
Bse1I	ACTGG	2 cut(s)	723, 1361
Bse3DI	GCAATG	2 cut(s)	903, 1107
Bse8I	GATNNNNATC	1 cut(s)	1005
BseBI	CCWGG	7 cut(s)	126, 145, 443, 518, 673, 996, 1045
BseDI	CCNNGG	5 cut(s)	125, 143, 215, 436, 665
BseGI	GGATG	7 cut(s)	526, 795, 822, 934, 1024, 1154, 1317
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	7 cut(s)	149, 160, 442, 678, 1088, 1234, 1415
BseMI	GCAATG	2 cut(s)	903, 1107
BseMII	CTCAG	2 cut(s)	944, 963
BseNI	ACTGG	2 cut(s)	723, 1361
BseRI	GAGGAG	4 cut(s)	840, 857, 1250, 1287
BseXI	GCAGC	4 cut(s)	37, 395, 659, 890
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	2 cut(s)	417, 1059
BshFI	GGCC	6 cut(s)	138, 153, 343, 441, 516, 1279
BshNI	GGYRCC	2 cut(s)	402, 1296
BsiHKAI	GWGCWC	1 cut(s)	178
BsiSI	CCGG	3 cut(s)	217, 665, 1228
BslI	CCNNNNNNNGG	7 cut(s)	149, 160, 442, 678, 1088, 1234, 1415
BsmAI	GTCTC	3 cut(s)	449, 804, 1076
BsmBI	CGTCTC	1 cut(s)	1076
BsmI	GAATGC	2 cut(s)	1265, 1425
BsnI	GGCC	6 cut(s)	138, 153, 343, 441, 516, 1279
Bsp1286I	GDGCHC	1 cut(s)	178
Bsp143I	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
Bsp1720I	GCTNAGC	2 cut(s)	930, 1308
Bsp68I	TCGCGA	1 cut(s)	1059
BspACI	CCGC	3 cut(s)	406, 417, 446
BspANI	GGCC	6 cut(s)	138, 153, 343, 441, 516, 1279
BspCNI	CTCAG	2 cut(s)	943, 964
BspFNI	CGCG	2 cut(s)	417, 1059
BspHI	TCATGA	1 cut(s)	883
BspLI	GGNNCC	5 cut(s)	286, 404, 670, 1298, 1395
BspMI	ACCTGC	1 cut(s)	1039
BspPI	GGATC	5 cut(s)	268, 596, 1199, 1388, 1401
BspQI	GCTCTTC	1 cut(s)	771
BspT107I	GGYRCC	2 cut(s)	402, 1296
BsrDI	GCAATG	2 cut(s)	903, 1107
BsrFI	RCCGGY	1 cut(s)	1227
BsrI	ACTGG	2 cut(s)	723, 1361
BssAI	RCCGGY	1 cut(s)	1227
BssECI	CCNNGG	5 cut(s)	125, 143, 215, 436, 665
BssMI	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
BssT1I	CCWWGG	1 cut(s)	436
Bst2UI	CCWGG	7 cut(s)	126, 145, 443, 518, 673, 996, 1045
Bst4CI	ACNGT	3 cut(s)	191, 271, 950
Bst6I	CTCTTC	4 cut(s)	771, 834, 1079, 1404
BstC8I	GCNNGC	4 cut(s)	419, 684, 1057, 1067
BstDEI	CTNAG	3 cut(s)	930, 972, 1308
BstENI	CCTNNNNNAGG	1 cut(s)	440
BstF5I	GGATG	7 cut(s)	526, 795, 822, 934, 1024, 1154, 1317
BstFNI	CGCG	2 cut(s)	417, 1059
BstKTI	GATC	6 cut(s)	263, 528, 591, 1003, 1207, 1396
BstMAI	GTCTC	3 cut(s)	449, 804, 1076
BstMBI	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
BstMWI	GCNNNNNNNGC	3 cut(s)	414, 692, 1262
BstNI	CCWGG	7 cut(s)	126, 145, 443, 518, 673, 996, 1045
BstNSI	RCATGY	3 cut(s)	971, 1069, 1244
BstSCI	CCNGG	9 cut(s)	124, 143, 215, 441, 516, 664, 671, 994, 1043
BstSFI	CTRYAG	1 cut(s)	169
BstUI	CGCG	2 cut(s)	417, 1059
BstV1I	GCAGC	4 cut(s)	37, 395, 659, 890
BstX2I	RGATCY	2 cut(s)	1204, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	1149
BstYI	RGATCY	2 cut(s)	1204, 1393
BsuRI	GGCC	6 cut(s)	138, 153, 343, 441, 516, 1279
BtsCI	GGATG	7 cut(s)	526, 795, 822, 934, 1024, 1154, 1317
BtuMI	TCGCGA	1 cut(s)	1059
BveI	ACCTGC	1 cut(s)	1039
Cac8I	GCNNGC	4 cut(s)	419, 684, 1057, 1067
CciI	TCATGA	1 cut(s)	883
Cfr10I	RCCGGY	1 cut(s)	1227
Cfr13I	GGNCC	3 cut(s)	136, 669, 1277
CseI	GACGC	1 cut(s)	1058
CsiI	ACCWGGT	1 cut(s)	994
Csp6I	GTAC	3 cut(s)	19, 1039, 1297
CspCI	CAANNNNNGTGG	2 cut(s)	15, 50
CviQI	GTAC	3 cut(s)	19, 1039, 1297
DdeI	CTNAG	3 cut(s)	930, 972, 1308
DpnI	GATC	6 cut(s)	262, 527, 590, 1002, 1206, 1395
DpnII	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
EaeI	YGGCCR	1 cut(s)	439
Eam1104I	CTCTTC	4 cut(s)	771, 834, 1079, 1404
EarI	CTCTTC	4 cut(s)	771, 834, 1079, 1404
Ecl136II	GAGCTC	1 cut(s)	176
Eco130I	CCWWGG	1 cut(s)	436
Eco24I	GRGCYC	1 cut(s)	178
Eco47I	GGWCC	1 cut(s)	669
Eco53kI	GAGCTC	1 cut(s)	176
Eco57I	CTGAAG	1 cut(s)	330
EcoICRI	GAGCTC	1 cut(s)	176
EcoNI	CCTNNNNNAGG	1 cut(s)	440
EcoRII	CCWGG	7 cut(s)	124, 143, 441, 516, 671, 994, 1043
EcoT14I	CCWWGG	1 cut(s)	436
EcoT22I	ATGCAT	1 cut(s)	1335
EcoT38I	GRGCYC	1 cut(s)	178
ErhI	CCWWGG	1 cut(s)	436
Esp3I	CGTCTC	1 cut(s)	1076
FalI	AAGNNNNNCTT	4 cut(s)	80, 112, 479, 511
FauI	CCCGC	2 cut(s)	410, 439
FauNDI	CATATG	3 cut(s)	1171, 1252, 1414
FbaI	TGATCA	1 cut(s)	1000
Fnu4HI	GCNGC	4 cut(s)	51, 409, 648, 879
FokI	GGATG	7 cut(s)	533, 802, 829, 921, 1031, 1161, 1304
FriOI	GRGCYC	1 cut(s)	178
Fsp4HI	GCNGC	4 cut(s)	51, 409, 648, 879
GluI	GCNGC	4 cut(s)	51, 409, 648, 879
HaeIII	GGCC	6 cut(s)	138, 153, 343, 441, 516, 1279
HapII	CCGG	3 cut(s)	217, 665, 1228
HgaI	GACGC	1 cut(s)	1058
HinfI	GANTC	5 cut(s)	300, 374, 820, 1131, 1345
HpaII	CCGG	3 cut(s)	217, 665, 1228
HphI	GGTGA	3 cut(s)	255, 340, 1010
Hpy166II	GTNNAC	3 cut(s)	21, 1041, 1164
Hpy188I	TCNGA	3 cut(s)	1011, 1192, 1271
Hpy188III	TCNNGA	7 cut(s)	553, 801, 884, 1058, 1099, 1342, 1373
Hpy8I	GTNNAC	3 cut(s)	21, 1041, 1164
HpyCH4III	ACNGT	3 cut(s)	191, 271, 950
HpyCH4V	TGCA	7 cut(s)	53, 224, 493, 542, 647, 1292, 1333
HpyF10VI	GCNNNNNNNGC	3 cut(s)	414, 692, 1262
HpyF3I	CTNAG	3 cut(s)	930, 972, 1308
KpnI	GGTACC	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	1000
Kzo9I	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
LguI	GCTCTTC	1 cut(s)	771
LmnI	GCTCC	2 cut(s)	284, 1237
Lsp1109I	GCAGC	4 cut(s)	37, 395, 659, 890
LweI	GCATC	2 cut(s)	359, 943
MabI	ACCWGGT	1 cut(s)	994
MaeIII	GTNAC	2 cut(s)	476, 1342
MalI	GATC	6 cut(s)	262, 527, 590, 1002, 1206, 1395
MboI	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
MflI	RGATCY	2 cut(s)	1204, 1393
MhlI	GDGCHC	1 cut(s)	178
MlsI	TGGCCA	1 cut(s)	441
MluCI	AATT	5 cut(s)	654, 658, 831, 1186, 1431
MluNI	TGGCCA	1 cut(s)	441
MlyI	GAGTC	2 cut(s)	368, 1339
Mox20I	TGGCCA	1 cut(s)	441
Mph1103I	ATGCAT	1 cut(s)	1335
MscI	TGGCCA	1 cut(s)	441
MseI	TTAA	5 cut(s)	482, 657, 723, 960, 1428
MslI	CAYNNNNRTG	3 cut(s)	908, 1147, 1328
Msp20I	TGGCCA	1 cut(s)	441
MspA1I	CMGCKG	1 cut(s)	408
MspI	CCGG	3 cut(s)	217, 665, 1228
MspR9I	CCNGG	9 cut(s)	126, 145, 217, 443, 518, 666, 673, 996, 1045
Mva1269I	GAATGC	2 cut(s)	1265, 1425
MvaI	CCWGG	7 cut(s)	126, 145, 443, 518, 673, 996, 1045
MvnI	CGCG	2 cut(s)	417, 1059
MwoI	GCNNNNNNNGC	3 cut(s)	414, 692, 1262
NciI	CCSGG	2 cut(s)	217, 666
NdeI	CATATG	3 cut(s)	1171, 1252, 1414
NdeII	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
NlaIV	GGNNCC	5 cut(s)	286, 404, 670, 1298, 1395
NmuCI	GTSAC	1 cut(s)	1342
NruI	TCGCGA	1 cut(s)	1059
NsiI	ATGCAT	1 cut(s)	1335
NspI	RCATGY	3 cut(s)	971, 1069, 1244
PaeI	GCATGC	1 cut(s)	1069
PagI	TCATGA	1 cut(s)	883
PciSI	GCTCTTC	1 cut(s)	771
PctI	GAATGC	2 cut(s)	1265, 1425
PfeI	GAWTC	3 cut(s)	300, 820, 1131
PflMI	CCANNNNNTGG	2 cut(s)	160, 678
PkrI	GCNGC	4 cut(s)	52, 410, 649, 880
PleI	GAGTC	2 cut(s)	368, 1339
PpsI	GAGTC	2 cut(s)	368, 1339
PshBI	ATTAAT	1 cut(s)	657
Psp124BI	GAGCTC	1 cut(s)	178
Psp6I	CCWGG	7 cut(s)	124, 143, 441, 516, 671, 994, 1043
PspGI	CCWGG	7 cut(s)	124, 143, 441, 516, 671, 994, 1043
PspN4I	GGNNCC	5 cut(s)	286, 404, 670, 1298, 1395
PspPI	GGNCC	3 cut(s)	136, 669, 1277
PsrI	GAACNNNNNNTAC	2 cut(s)	1022, 1054
PsuI	RGATCY	2 cut(s)	1204, 1393
RruI	TCGCGA	1 cut(s)	1059
RsaI	GTAC	3 cut(s)	20, 1040, 1298
RsaNI	GTAC	3 cut(s)	19, 1039, 1297
RseI	CAYNNNNRTG	3 cut(s)	908, 1147, 1328
SacI	GAGCTC	1 cut(s)	178
SapI	GCTCTTC	1 cut(s)	771
SaqAI	TTAA	5 cut(s)	482, 657, 723, 960, 1428
SatI	GCNGC	4 cut(s)	51, 409, 648, 879
Sau3AI	GATC	6 cut(s)	260, 525, 588, 1000, 1204, 1393
Sau96I	GGNCC	3 cut(s)	136, 669, 1277
SchI	GAGTC	2 cut(s)	368, 1339
ScrFI	CCNGG	9 cut(s)	126, 145, 217, 443, 518, 666, 673, 996, 1045
SduI	GDGCHC	1 cut(s)	178
SexAI	ACCWGGT	1 cut(s)	994
SfaNI	GCATC	2 cut(s)	359, 943
SfcI	CTRYAG	1 cut(s)	169
SinI	GGWCC	1 cut(s)	669
SmiMI	CAYNNNNRTG	3 cut(s)	908, 1147, 1328
SmlI	CTYRAG	2 cut(s)	430, 452
SmoI	CTYRAG	2 cut(s)	430, 452
SphI	GCATGC	1 cut(s)	1069
Sse9I	AATT	5 cut(s)	654, 658, 831, 1186, 1431
SsiI	CCGC	3 cut(s)	406, 417, 446
SspI	AATATT	1 cut(s)	1196
SstI	GAGCTC	1 cut(s)	178
StyD4I	CCNGG	9 cut(s)	124, 143, 215, 441, 516, 664, 671, 994, 1043
StyI	CCWWGG	1 cut(s)	436
TaaI	ACNGT	3 cut(s)	191, 271, 950
TaqI	TCGA	5 cut(s)	198, 563, 802, 823, 1211
TasI	AATT	5 cut(s)	654, 658, 831, 1186, 1431
TatI	WGTACW	1 cut(s)	1038
TfiI	GAWTC	3 cut(s)	300, 820, 1131
Tru1I	TTAA	5 cut(s)	482, 657, 723, 960, 1428
Tru9I	TTAA	5 cut(s)	482, 657, 723, 960, 1428
TseFI	GTSAC	1 cut(s)	1342
TseI	GCWGC	4 cut(s)	50, 408, 647, 878
Tsp45I	GTSAC	1 cut(s)	1342
TspDTI	ATGAA	6 cut(s)	500, 1049, 1140, 1318, 1327, 1401
Van91I	CCANNNNNTGG	2 cut(s)	160, 678
VpaK11BI	GGWCC	1 cut(s)	669
VspI	ATTAAT	1 cut(s)	657
XagI	CCTNNNNNAGG	1 cut(s)	440
XceI	RCATGY	3 cut(s)	971, 1069, 1244
Zsp2I	ATGCAT	1 cut(s)	1335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.