Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000696

Physical Location & Seq

Genomic Coordinates Reverse (-)

21487310 .. 21489079

Gene Structure 1770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0125500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCGAATACTATGTCTTCTTTTGGGGAGTTCAACTTTGGTGGAGTTCAGGATAAACTTGGCTCCACTGTTGAGATTATGGAAGTGGAGAGCATTGGGGGGAAACAAGTTTATGAAGCAGAAAATTGGGGTGGATTTGGTTCCCTTCGTTCTGATTATGGAATTTATGGAAATGGCTTCTCGGATTTTACCAAATACCAACAACAAGATCAGCAGCTGCAGCAGCAGCCACAATTGATTTCCGACTATGGGGTCTTCGATGACATGCAGTTTCAGTTTGGTGCTCTCTCCCCACCACTTCAAGCATGCTTGGAGGAGATAGCTAAGCTTGAGAGTATCCCAACTTTAGTTCCACATGTTGAACCACCCAAGAAAGAATTAAAGAGAGACTTTTTTTCTGTAGCAGGGCTTGATCTCTTAAACAACTATGGCAGCGGGTTCAAACGCTTGAATGGGGAAAGAATTGTCGAGCCTAACCCTTATCCAGCGTACACAGAGGTGAAGAGTAGCAAGTTATCAACAGAAGAAATCATGAGGGTGGCAGGAGCAAGGTTTATTCGTACTGCTTCCCAAGTGTCGCCGTCTGATATACCCTCCATGCTTAGCCATCCTTTTGAACTCTCCTTTGCTGGCCTCTCCAATGAGGAGAGTAGAGATGTGGAACTTGTGGAATTCCTTCTTGCTTCAGCTGAGAAAGTAGGATATCAACAATATGAGCGTGCAAGCAAGTTGCTTGACCTCTGTGAGAGGTTGTGTTCTGATAGAGGAAATCCAGTTGAACGAGTGGTTTTCTACTTTTGTGAAGCTCTTCGAGACAAGATTGATCGAGAAACTGGAAGAACCATACAAAAAAAGCAGTCATTTGATATTGATAAGGCAATGATGATCACAAATGAAACCTCCCTTGCATGTCACAACAAGATCCCTTTCTCCCAAGTTGCACAATTTGCTGGAATTCAAGCCGTAGTGGAAAAGGTGGTTGAGGCTAAGAAGGTTCATGTAATTGATCTGGAAATCAGGAGTGGAGTGCAATGGACAGTTCTGATGCAAGCCTTAGCATCCCGTGATTTCCCGCTTGAACTTCTCAAGATAAGTGCTGTCGGAACTTCTAAAGAAACGATTCAGAATACAGGTAAGTGGTTGGAGAGTTTTGCCAAAACCATGAACTTACCATTTTCTTTCAAAATGGTGCTGGTACCAGATATGCTAGATCTCAAGGAAGACATGTTTGAGCTAGATTCTGAGGAAACGGTTGCAGTCTACACTCAGTTCGTACTGAGGTCCATGGTCCCACAGCCAGATCGCCTGGATTCTTTAATGAAAGTGATAAAGAACATCCATCCATCTGTAACAGTGGTCACCGAAGTTGAGGCGAATCACAACTCACCTGTATTTGTGACCAGATTCATTGAAGCCCTTTTCTTCTTTAGTGCATTCTTTGACTGCGCGGAAACTTGTATTGAACAAAATGATCCAATAAGAAAGAGTTTGGAGTCGCACTACTTTGGAAATGGAATTAAAAATATTGTGGCAACTGAAGGAGAGGAGAGGAAGATACGTAATGTGAAGATTGATGTTTGGAGGGCATTTTTTGCTCGCTATGGAATGGAGGAGATGGAGTTAAGCTCATCATCCTTATATCAAGCCGAGCTGGTGGCTAAGAACTTTCCCTGTGGGAATTCTTGCACCATCACTATGGATGGGAAAACCCTGATTGCCGGATGGAAAGGAACACCTCTCCAATCTCTTTCTCTTTGGAAATTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

589

Amino Acids

66.39

Weight (kDa)

5.06

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	223 - 587	7.1e-83	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000696)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0000300.1 Rorug01G0032600 Rorug01G0105700 Rorug01G0105900 Rorug01G0125500 Rorug01G0135300.1 Rorug01G0137600.1 Rorug01G0152300.1 Rorug01G0195600 Rorug01G0217100 Rorug01G0290000 Rorug01G0297100 Rorug01G0447500.1 Rorug01G0451400 Rorug02G0189000 Rorug02G0189900 Rorug02G0336700 Rorug02G0338800 Rorug02G0339300 Rorug02G0474300 Rorug02G0529100 Rorug03G0247900 Rorug03G0248000 Rorug03G0273100 Rorug03G0278100 Rorug03G0278300 Rorug03G0327500 Rorug03G0333900 Rorug03G0333900 Rorug03G0342800 Rorug04G0071700 Rorug04G0090300 Rorug04G0101700 Rorug04G0259500 Rorug04G0259600 Rorug04G0260400.1 Rorug04G0417900 Rorug04G0417900 Rorug04G0443700 Rorug05G0092800 Rorug05G0153100 Rorug05G0156400 Rorug05G0157200 Rorug05G0157500 Rorug05G0190700 Rorug05G0216400 Rorug05G0216600 Rorug05G0220800 Rorug05G0221000 Rorug05G0227500 Rorug05G0234300 Rorug05G0274000 Rorug05G0317400 Rorug05G0318900 Rorug05G0319000 Rorug05G0360100 Rorug05G0360600 Rorug05G0369400 Rorug05G0498900 Rorug05G0526500 Rorug05G0527200.1 Rorug05G0560300 Rorug05G0567800 Rorug05G0567900 Rorug06G0051000.1 Rorug06G0063600 Rorug06G0466600 Rorug07G0187300.1 Rorug07G0190200 Rorug07G0190200 Rorug07G0190300 Rorug07G0190400.1 Rorug07G0219000 Rorug07G0305100 Rorug07G0321000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	251
Acc65I	GGTACC	1 cut(s)	1195
AccB1I	GGYRCC	1 cut(s)	1195
AccI	GTMKAC	1 cut(s)	1260
AccII	CGCG	1 cut(s)	1448
AciI	CCGC	3 cut(s)	435, 1073, 1448
AclWI	GGATC	2 cut(s)	916, 1466
AcsI	RAATTY	5 cut(s)	162, 671, 954, 1678, 1760
AcuI	CTGAAG	2 cut(s)	669, 1557
AfaI	GTAC	4 cut(s)	491, 562, 1197, 1275
AfiI	CCNNNNNNNGG	1 cut(s)	249
AflIII	ACRYGT	2 cut(s)	355, 1224
AjnI	CCWGG	1 cut(s)	1305
AleI	CACNNNNGTG	1 cut(s)	497
AluBI	AGCT	8 cut(s)	217, 323, 328, 689, 806, 1234, 1626, 1651
AluI	AGCT	8 cut(s)	217, 323, 328, 689, 806, 1234, 1626, 1651
Alw21I	GWGCWC	1 cut(s)	286
Alw26I	GTCTC	2 cut(s)	381, 807
AlwI	GGATC	2 cut(s)	916, 1466
AlwNI	CAGNNNCTG	1 cut(s)	217
AoxI	GGCC	1 cut(s)	631
ApeKI	GCWGC	6 cut(s)	214, 217, 220, 223, 226, 432
ApoI	RAATTY	5 cut(s)	162, 671, 954, 1678, 1760
ArsI	GACNNNNNNTTYG	1 cut(s)	31
Asp700I	GAANNNNTTC	3 cut(s)	675, 807, 1119
Asp718I	GGTACC	1 cut(s)	1195
AspLEI	GCGC	1 cut(s)	1448
AspS9I	GGNCC	2 cut(s)	1281, 1288
AsuHPI	GGTGA	3 cut(s)	511, 1351, 1377
AvaII	GGWCC	2 cut(s)	1281, 1288
BanI	GGYRCC	1 cut(s)	1195
BbsI	GAAGAC	3 cut(s)	9, 247, 1227
Bbv12I	GWGCWC	1 cut(s)	286
BbvI	GCAGC	6 cut(s)	204, 226, 232, 235, 238, 444
BccI	CCATC	7 cut(s)	615, 1347, 1351, 1609, 1694, 1697, 1716
BceAI	ACGGC	2 cut(s)	565, 947
BciT130I	CCWGG	1 cut(s)	1307
BciVI	GTATCC	1 cut(s)	347
BclI	TGATCA	1 cut(s)	885
BcoDI	GTCTC	2 cut(s)	381, 807
BfaI	CTAG	2 cut(s)	1208, 1235
BfmI	CTRYAG	2 cut(s)	218, 399
BfuI	GTATCC	1 cut(s)	347
BglII	AGATCT	1 cut(s)	1210
BisI	GCNGC	6 cut(s)	215, 218, 221, 224, 227, 433
BlpI	GCTNAGC	2 cut(s)	324, 602
BlsI	GCNGC	6 cut(s)	216, 219, 222, 225, 228, 434
Bme1390I	CCNGG	1 cut(s)	1307
Bme18I	GGWCC	2 cut(s)	1281, 1288
BmgT120I	GGNCC	2 cut(s)	1281, 1288
BmiI	GGNNCC	4 cut(s)	64, 142, 1197, 1290
BmrFI	CCNGG	1 cut(s)	1307
BmsI	GCATC	2 cut(s)	1035, 1067
BpiI	GAAGAC	3 cut(s)	9, 247, 1227
BplI	GAGNNNNNCTC	2 cut(s)	1610, 1642
Bpu10I	CCTNAGC	1 cut(s)	1054
Bpu1102I	GCTNAGC	2 cut(s)	324, 602
BpuEI	CTTGAG	3 cut(s)	350, 1070, 1199
BsaAI	YACGTR	1 cut(s)	1559
BsaJI	CCNNGG	1 cut(s)	1284
BsaXI	ACNNNNNCTCC	2 cut(s)	1604, 1634
Bsc4I	CCNNNNNNNGG	1 cut(s)	249
Bse1I	ACTGG	2 cut(s)	773, 838
Bse3DI	GCAATG	2 cut(s)	885, 1037
BseBI	CCWGG	1 cut(s)	1307
BseDI	CCNNGG	1 cut(s)	1284
BseGI	GGATG	7 cut(s)	607, 1058, 1335, 1339, 1631, 1705, 1727
BseLI	CCNNNNNNNGG	1 cut(s)	249
BseMI	GCAATG	2 cut(s)	885, 1037
BseMII	CTCAG	4 cut(s)	681, 1233, 1268, 1280
BseNI	ACTGG	2 cut(s)	773, 838
BseRI	GAGGAG	4 cut(s)	329, 659, 1559, 1625
BseXI	GCAGC	6 cut(s)	204, 226, 232, 235, 238, 444
Bsh1236I	CGCG	1 cut(s)	1448
BshFI	GGCC	1 cut(s)	633
BshNI	GGYRCC	1 cut(s)	1195
BsiHKAI	GWGCWC	1 cut(s)	286
BsiSI	CCGG	1 cut(s)	1719
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	1 cut(s)	249
BsmAI	GTCTC	2 cut(s)	381, 807
BsmFI	GGGAC	1 cut(s)	1274
BsmI	GAATGC	1 cut(s)	1433
BsnI	GGCC	1 cut(s)	633
Bsp1286I	GDGCHC	1 cut(s)	286
Bsp143I	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
Bsp1720I	GCTNAGC	2 cut(s)	324, 602
Bsp19I	CCATGG	1 cut(s)	1284
BspACI	CCGC	3 cut(s)	435, 1073, 1448
BspANI	GGCC	1 cut(s)	633
BspCNI	CTCAG	4 cut(s)	682, 1234, 1269, 1279
BspFNI	CGCG	1 cut(s)	1448
BspHI	TCATGA	1 cut(s)	531
BspLI	GGNNCC	4 cut(s)	64, 142, 1197, 1290
BspMAI	CTGCAG	1 cut(s)	222
BspPI	GGATC	2 cut(s)	916, 1466
BspQI	GCTCTTC	1 cut(s)	813
BspT107I	GGYRCC	1 cut(s)	1195
BsrDI	GCAATG	2 cut(s)	885, 1037
BsrI	ACTGG	2 cut(s)	773, 838
BssECI	CCNNGG	1 cut(s)	1284
BssMI	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
BssT1I	CCWWGG	1 cut(s)	1284
Bst2UI	CCWGG	1 cut(s)	1307
Bst4CI	ACNGT	4 cut(s)	70, 1039, 1252, 1354
Bst6I	CTCTTC	2 cut(s)	497, 813
BstAPI	GCANNNNNTGC	2 cut(s)	947, 1592
BstBAI	YACGTR	1 cut(s)	1559
BstC8I	GCNNGC	6 cut(s)	307, 631, 720, 724, 1050, 1597
BstDEI	CTNAG	9 cut(s)	324, 602, 690, 987, 1054, 1242, 1266, 1277, 1659
BstDSI	CCRYGG	1 cut(s)	1284
BstEII	GGTNACC	1 cut(s)	1357
BstF5I	GGATG	7 cut(s)	607, 1058, 1335, 1339, 1631, 1705, 1727
BstFNI	CGCG	1 cut(s)	1448
BstHHI	GCGC	1 cut(s)	1448
BstKTI	GATC	9 cut(s)	211, 415, 826, 888, 924, 1009, 1213, 1303, 1474
BstMAI	GTCTC	2 cut(s)	381, 807
BstMBI	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
BstMWI	GCNNNNNNNGC	5 cut(s)	220, 223, 226, 947, 1592
BstNI	CCWGG	1 cut(s)	1307
BstNSI	RCATGY	5 cut(s)	268, 309, 359, 912, 1228
BstPI	GGTNACC	1 cut(s)	1357
BstSCI	CCNGG	1 cut(s)	1305
BstSFI	CTRYAG	2 cut(s)	218, 399
BstSNI	TACGTA	1 cut(s)	1559
BstUI	CGCG	1 cut(s)	1448
BstV1I	GCAGC	6 cut(s)	204, 226, 232, 235, 238, 444
BstV2I	GAAGAC	3 cut(s)	9, 247, 1227
BstX2I	RGATCY	2 cut(s)	921, 1210
BstXI	CCANNNNNNTGG	1 cut(s)	1696
BstYI	RGATCY	2 cut(s)	921, 1210
BsuI	GTATCC	1 cut(s)	347
BsuRI	GGCC	1 cut(s)	633
BtgI	CCRYGG	1 cut(s)	1284
BtsCI	GGATG	7 cut(s)	607, 1058, 1335, 1339, 1631, 1705, 1727
BtsIMutI	CAGTG	2 cut(s)	66, 1359
Cac8I	GCNNGC	6 cut(s)	307, 631, 720, 724, 1050, 1597
CaiI	CAGNNNCTG	1 cut(s)	217
CciI	TCATGA	1 cut(s)	531
CfoI	GCGC	1 cut(s)	1448
Cfr13I	GGNCC	2 cut(s)	1281, 1288
Csp6I	GTAC	4 cut(s)	490, 561, 1196, 1274
CspCI	CAANNNNNGTGG	2 cut(s)	22, 57
CviQI	GTAC	4 cut(s)	490, 561, 1196, 1274
DdeI	CTNAG	9 cut(s)	324, 602, 690, 987, 1054, 1242, 1266, 1277, 1659
DpnI	GATC	9 cut(s)	210, 414, 825, 887, 923, 1008, 1212, 1302, 1473
DpnII	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
DrdI	GACNNNNNNGTC	1 cut(s)	251
DseDI	GACNNNNNNGTC	1 cut(s)	251
Eam1104I	CTCTTC	2 cut(s)	497, 813
EarI	CTCTTC	2 cut(s)	497, 813
Eco105I	TACGTA	1 cut(s)	1559
Eco130I	CCWWGG	1 cut(s)	1284
Eco32I	GATATC	1 cut(s)	704
Eco47I	GGWCC	2 cut(s)	1281, 1288
Eco57I	CTGAAG	2 cut(s)	669, 1557
Eco91I	GGTNACC	1 cut(s)	1357
EcoO65I	GGTNACC	1 cut(s)	1357
EcoRI	GAATTC	3 cut(s)	671, 954, 1678
EcoRII	CCWGG	1 cut(s)	1305
EcoRV	GATATC	1 cut(s)	704
EcoT14I	CCWWGG	1 cut(s)	1284
ErhI	CCWWGG	1 cut(s)	1284
FalI	AAGNNNNNCTT	2 cut(s)	374, 406
FaqI	GGGAC	1 cut(s)	1274
FauI	CCCGC	2 cut(s)	428, 1080
FbaI	TGATCA	1 cut(s)	885
FblI	GTMKAC	1 cut(s)	1260
Fnu4HI	GCNGC	6 cut(s)	215, 218, 221, 224, 227, 433
FokI	GGATG	7 cut(s)	594, 1045, 1322, 1326, 1618, 1712, 1734
Fsp4HI	GCNGC	6 cut(s)	215, 218, 221, 224, 227, 433
FspBI	CTAG	2 cut(s)	1208, 1235
GlaI	GCGC	1 cut(s)	1447
GluI	GCNGC	6 cut(s)	215, 218, 221, 224, 227, 433
HaeIII	GGCC	1 cut(s)	633
HapII	CCGG	1 cut(s)	1719
HhaI	GCGC	1 cut(s)	1448
Hin6I	GCGC	1 cut(s)	1446
HinP1I	GCGC	1 cut(s)	1446
HindIII	AAGCTT	1 cut(s)	326
HinfI	GANTC	6 cut(s)	1120, 1238, 1310, 1375, 1404, 1493
HpaII	CCGG	1 cut(s)	1719
HphI	GGTGA	3 cut(s)	511, 1351, 1377
Hpy166II	GTNNAC	2 cut(s)	492, 1261
Hpy188I	TCNGA	9 cut(s)	154, 184, 244, 586, 760, 1044, 1103, 1125, 1243
Hpy188III	TCNNGA	7 cut(s)	50, 532, 812, 827, 1010, 1018, 1087
Hpy8I	GTNNAC	2 cut(s)	492, 1261
HpyAV	CCTTC	4 cut(s)	155, 686, 985, 1532
HpyCH4III	ACNGT	4 cut(s)	70, 1039, 1252, 1354
HpyCH4IV	ACGT	1 cut(s)	1558
HpyF10VI	GCNNNNNNNGC	5 cut(s)	220, 223, 226, 947, 1592
HpyF3I	CTNAG	9 cut(s)	324, 602, 690, 987, 1054, 1242, 1266, 1277, 1659
HpySE526I	ACGT	1 cut(s)	1558
HspAI	GCGC	1 cut(s)	1446
KpnI	GGTACC	1 cut(s)	1199
Ksp22I	TGATCA	1 cut(s)	885
Kzo9I	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	2 cut(s)	68, 545
Lsp1109I	GCAGC	6 cut(s)	204, 226, 232, 235, 238, 444
LweI	GCATC	2 cut(s)	1035, 1067
MaeI	CTAG	2 cut(s)	1208, 1235
MaeII	ACGT	1 cut(s)	1558
MaeIII	GTNAC	4 cut(s)	911, 1348, 1357, 1396
MalI	GATC	9 cut(s)	210, 414, 825, 887, 923, 1008, 1212, 1302, 1473
MboI	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
MfeI	CAATTG	1 cut(s)	233
MflI	RGATCY	2 cut(s)	921, 1210
MhlI	GDGCHC	1 cut(s)	286
MlyI	GAGTC	1 cut(s)	1502
MmeI	TCCRAC	3 cut(s)	267, 1081, 1122
MroXI	GAANNNNTTC	3 cut(s)	675, 807, 1119
MseI	TTAA	5 cut(s)	380, 419, 1316, 1518, 1622
MslI	CAYNNNNRTG	3 cut(s)	497, 536, 1694
MspA1I	CMGCKG	3 cut(s)	217, 435, 689
MspI	CCGG	1 cut(s)	1719
MspR9I	CCNGG	1 cut(s)	1307
MunI	CAATTG	1 cut(s)	233
Mva1269I	GAATGC	1 cut(s)	1433
MvaI	CCWGG	1 cut(s)	1307
MvnI	CGCG	1 cut(s)	1448
MwoI	GCNNNNNNNGC	5 cut(s)	220, 223, 226, 947, 1592
NcoI	CCATGG	1 cut(s)	1284
NdeII	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
NlaIV	GGNNCC	4 cut(s)	64, 142, 1197, 1290
NmeAIII	GCCGAG	1 cut(s)	1672
NmuCI	GTSAC	3 cut(s)	911, 1357, 1396
NspI	RCATGY	5 cut(s)	268, 309, 359, 912, 1228
OliI	CACNNNNGTG	1 cut(s)	497
PaeI	GCATGC	1 cut(s)	309
PagI	TCATGA	1 cut(s)	531
PciI	ACATGT	2 cut(s)	355, 1224
PciSI	GCTCTTC	1 cut(s)	813
PctI	GAATGC	1 cut(s)	1433
PdmI	GAANNNNTTC	3 cut(s)	675, 807, 1119
PfeI	GAWTC	5 cut(s)	1120, 1238, 1310, 1375, 1404
PkrI	GCNGC	6 cut(s)	216, 219, 222, 225, 228, 434
PleI	GAGTC	1 cut(s)	1501
PpsI	GAGTC	1 cut(s)	1501
Ppu21I	YACGTR	1 cut(s)	1559
PscI	ACATGT	2 cut(s)	355, 1224
Psp6I	CCWGG	1 cut(s)	1305
PspEI	GGTNACC	1 cut(s)	1357
PspGI	CCWGG	1 cut(s)	1305
PspN4I	GGNNCC	4 cut(s)	64, 142, 1197, 1290
PspPI	GGNCC	2 cut(s)	1281, 1288
PstI	CTGCAG	1 cut(s)	222
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	2 cut(s)	921, 1210
PvuII	CAGCTG	2 cut(s)	217, 689
RsaI	GTAC	4 cut(s)	491, 562, 1197, 1275
RsaNI	GTAC	4 cut(s)	490, 561, 1196, 1274
RseI	CAYNNNNRTG	3 cut(s)	497, 536, 1694
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	5 cut(s)	380, 419, 1316, 1518, 1622
SatI	GCNGC	6 cut(s)	215, 218, 221, 224, 227, 433
Sau3AI	GATC	9 cut(s)	208, 412, 823, 885, 921, 1006, 1210, 1300, 1471
Sau96I	GGNCC	2 cut(s)	1281, 1288
SchI	GAGTC	1 cut(s)	1502
ScrFI	CCNGG	1 cut(s)	1307
SduI	GDGCHC	1 cut(s)	286
SfaNI	GCATC	2 cut(s)	1035, 1067
SfcI	CTRYAG	2 cut(s)	218, 399
SinI	GGWCC	2 cut(s)	1281, 1288
SmiMI	CAYNNNNRTG	3 cut(s)	497, 536, 1694
SmlI	CTYRAG	3 cut(s)	329, 1085, 1214
SmoI	CTYRAG	3 cut(s)	329, 1085, 1214
SnaBI	TACGTA	1 cut(s)	1559
SphI	GCATGC	1 cut(s)	309
SsiI	CCGC	3 cut(s)	435, 1073, 1448
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	2 cut(s)	1208, 1235
StyD4I	CCNGG	1 cut(s)	1305
StyI	CCWWGG	1 cut(s)	1284
TaaI	ACNGT	4 cut(s)	70, 1039, 1252, 1354
TaiI	ACGT	1 cut(s)	1561
TaqI	TCGA	4 cut(s)	258, 468, 811, 826
TfiI	GAWTC	5 cut(s)	1120, 1238, 1310, 1375, 1404
Tru1I	TTAA	5 cut(s)	380, 419, 1316, 1518, 1622
Tru9I	TTAA	5 cut(s)	380, 419, 1316, 1518, 1622
TscAI	CASTG	2 cut(s)	73, 1359
TseFI	GTSAC	3 cut(s)	911, 1357, 1396
TseI	GCWGC	6 cut(s)	214, 217, 220, 223, 226, 432
Tsp45I	GTSAC	3 cut(s)	911, 1357, 1396
TspDTI	ATGAA	6 cut(s)	129, 909, 986, 1178, 1334, 1396
TspRI	CASTG	2 cut(s)	73, 1359
VpaK11BI	GGWCC	2 cut(s)	1281, 1288
XapI	RAATTY	5 cut(s)	162, 671, 954, 1678, 1760
XceI	RCATGY	5 cut(s)	268, 309, 359, 912, 1228
XmiI	GTMKAC	1 cut(s)	1260
XmnI	GAANNNNTTC	3 cut(s)	675, 807, 1119
XspI	CTAG	2 cut(s)	1208, 1235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.