Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011058

Physical Location & Seq

Genomic Coordinates Forward (+)

1319074 .. 1323364

Gene Structure 4291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGTCATCGACGTTTCGAGCTCCGGCGGGAGCCGCTACTGTGTTTACGGCGGATCAGAAGATCAGACTTGGGAGGCTCGACGCTCTGAGATCCTCTCATTCTGTTTTCTTAGGAAGATATGGACGCGGCGGCGTCCCGGTTCCTCCTTCCGCTTCTTCGTCGAGTTCTTCGCCTATTCAAGCCGTCTCCACTCCTGCGAAGCCTGAGACTGCGACCAAGCGGAGCAAAGTCGAAATTATCAAGGAGAAGAGTAATTTCATAAGGTATCCTTTGAACGAGGAGCTTTTAACAGAGGCTCCAAATGTCAACGAGTCAGCCGTGCAGCTTATCAAGTTCCACGGTAGCTACCAACAGTACAACAGAGAAGAACGTGGTGGAAGATCTTACTCCTTCATGCTTCGAACTAAGAATCCATCTGGGAAGGTCCCTAACCAGCTCTATTTGACTATGGATGACTTAGCTGATGAGTTTGGAATTGGTACTCTTCGTTTGACCACAAGGCAGACGTTTCAGCTTCATGGTGTTCTGAAGCAGAATCTTAAGACTGTGATGAGCTCGATTATTAAAAATATGGGTAGCACGCTTGGTGCATGTGGTGATCTGAACAGAAATGTTCTTGCTCCTGCTGCACCTTATGTGAAGAAAGACTATCTCTTTGCACAAGAAACTGCTGACAACATTGCGGCTCTTCTTTCTCCTCAATCAGGGTTCTATTATGATATGTGGGTTGATGGAGAGCAGTTCATGACTGCTGAACCTCCAGAGGTAGTGAAGGCTCGAAATGATAACTCCCATGGAACTAACTTTGTCGACTCTCCTGAGCCCATCTATGGCACCCAGTTCTTGCCTAGAAAGTTCAAGGTCGCTGTAACTGTTCCTACAGATAATTCCGTCGACCTCCTCACCAATGACATTGGCGTTGTTGTTGTTTCAGATGAAAATGGGGAACCACAGGGTTTCAATATTTATGTTGGTGGGGGTATGGGAAGAACACACAGAATGGAGTCTACTTTTGCCCGCCTGGCAGAACCAATAGGTTATGTTCCAAAGGAAGATATTTTGTATGCTGTGAAGGCCATTGTAGTCACACAGCGAGAACACGGGAGACGAGATGATCGTAAATATAGCAGAATGAAATATTTGATCAGCTCCTGGGGAATTGAGAAGTTCAGAGATGTTGTTGAGCAATATTATGGTAAAAAGTTTGAGCCTTCCCGTGAACTTCCAGAGTGGGAGTTCAAGAGTTACTTGGGATGGCATGAACAGGGAGATGGTGCATGGTTTTGTGGGCTTCACGTAGACAGTGGTCGTGTTGGAGGTATAATGAAGAAGACGCTGAGAGAAGTAATAGAGAAATACAAAATTGATGTCCGCATCACACCAAACCAAAACATTGTCTTGTGTGATATAAAGACTGAATGGAAGCGTCCCATCACCACAGTACTTGCTCAGGCCGGCTTACTGCAACCTGAGTTTGTCGACCCATTAAACCAAACTGCAATGGCTTGCCCAGCTTTTCCTTTGTGCCCTCTGGCAATAACTGAGGCAGAGCGCGGGATCCCCAGCATTCTAAAGAGAGTTAGGGCAATGTTTGAAAAGGTTGGTCTGGACTACGACGAGTCTGTTGTGATAAGAGTAACCGGTTGTCCAAACGGCTGTGCAAGACCGTACATGGCTGAGCTCGGTCTAGTCGGGGATGGTCCCAACAGCTATCAGGTTTGGCTAGGAGGAACACCGAACCTGACCCAGATAGCGAGAAGTTTCATGGATAAGGTTAAGGTTCACGACTTAGAGAAAGTCTGCGAGCCATTGTTCTATCACTGGAAACTAGAGAGGCAAACTAAAGAATCATTTGGAGAATACACAACCCGCATGGGATTCGAGAAACTGAAGGAGCTGATAGATACATACAAAGGAGTTTCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006275 GO:0006323 GO:0006355 GO:0006790 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009295 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010319 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016002 GO:0016020 GO:0016043 GO:0016491 GO:0016667 GO:0016673 GO:0019219 GO:0019222 GO:0019418 GO:0019419 GO:0019424 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031975 GO:0036385 GO:0042644 GO:0042646 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048046 GO:0048519 GO:0048523 GO:0050311 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055114 GO:0060255 GO:0065007 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:1900160 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

642

Amino Acids

71.95

Weight (kDa)

8.51

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	130 - 186	4e-14	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	225 - 402	1.6e-43	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	420 - 473	2e-10	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	499 - 639	1.5e-09	Nitrite and sulphite reductase 4Fe-4S domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04590
fragaria_vesca	FvH4_3g28720 FvH4_3g28720 FvH4_3g28720 FvH4_3g28720
malus_domestica	MD03G1173800.v1.1 MD11G1192000.v1.1
prunus_persica	Prupe.4G250500_v2.0.a1
pyrus_communis	pycom03g13140 pycom11g16770
rosa_chinensis	RchiOBHm_Chr5g0052341
rosa_laevigata	RLG00000034823
rosa_multiflora	Rmu_sc0000968.1_g000009
rosa_roxburghii	Rroxscaffold_1G00028250
rosa_rugosa	Rorug05G0272600
rosa_samantha	Rh5AG345200 Rh5BG356300 Rh5CG381600 Rh5DG371400
rosa_wichuraiana	Rw5G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	833
AccI	GTMKAC	5 cut(s)	810, 894, 1007, 1299, 1479
AccII	CGCG	2 cut(s)	126, 1554
AclWI	GGATC	4 cut(s)	60, 84, 1552, 1565
AcuI	CTGAAG	2 cut(s)	548, 1910
AcyI	GRCGYC	1 cut(s)	132
AfaI	GTAC	4 cut(s)	356, 481, 1443, 1670
AfiI	CCNNNNNNNGG	2 cut(s)	704, 830
AflII	CTTAAG	1 cut(s)	539
AgeI	ACCGGT	1 cut(s)	1640
AgsI	TTSAA	6 cut(s)	179, 274, 859, 961, 1240, 1595
AjnI	CCWGG	2 cut(s)	1020, 1151
AloI	GAACNNNNNNTCC	2 cut(s)	394, 426
Alw21I	GWGCWC	3 cut(s)	22, 557, 1683
Alw26I	GTCTC	3 cut(s)	190, 200, 1099
AlwI	GGATC	4 cut(s)	60, 84, 1552, 1565
AlwNI	CAGNNNCTG	1 cut(s)	1152
AoxI	GGCC	2 cut(s)	1074, 1452
ApeKI	GCWGC	2 cut(s)	322, 626
ArsI	GACNNNNNNTTYG	4 cut(s)	638, 670, 1353, 1385
AsiGI	ACCGGT	1 cut(s)	1640
AspLEI	GCGC	1 cut(s)	1554
AspS9I	GGNCC	2 cut(s)	424, 1700
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	3 cut(s)	608, 895, 1426
AsuII	TTCGAA	1 cut(s)	400
AvaII	GGWCC	2 cut(s)	424, 1700
BaeGI	GKGCMC	1 cut(s)	1529
BamHI	GGATCC	1 cut(s)	1557
BanI	GGYRCC	1 cut(s)	833
BanII	GRGCYC	4 cut(s)	22, 557, 825, 1683
BbsI	GAAGAC	1 cut(s)	1337
Bbv12I	GWGCWC	3 cut(s)	22, 557, 1683
BbvI	GCAGC	2 cut(s)	334, 613
BccI	CCATC	7 cut(s)	421, 725, 833, 1248, 1265, 1439, 1691
BceAI	ACGGC	4 cut(s)	63, 167, 302, 1669
BcgI	CGANNNNNNTGC	2 cut(s)	1861, 1895
BciT130I	CCWGG	2 cut(s)	1022, 1153
BciVI	GTATCC	1 cut(s)	276
BclI	TGATCA	1 cut(s)	1143
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	3 cut(s)	190, 200, 1099
BfaI	CTAG	4 cut(s)	849, 1688, 1724, 1829
BfmI	CTRYAG	1 cut(s)	879
BfrI	CTTAAG	1 cut(s)	539
BfuI	GTATCC	1 cut(s)	276
BglI	GCCNNNNNGGC	1 cut(s)	1022
BglII	AGATCT	1 cut(s)	380
BisI	GCNGC	6 cut(s)	33, 127, 130, 323, 627, 684
BlpI	GCTNAGC	1 cut(s)	1677
BlsI	GCNGC	6 cut(s)	34, 128, 131, 324, 628, 685
BmcAI	AGTACT	1 cut(s)	1443
Bme1390I	CCNGG	3 cut(s)	137, 1022, 1153
Bme18I	GGWCC	2 cut(s)	424, 1700
BmgT120I	GGNCC	2 cut(s)	424, 1700
BmiI	GGNNCC	8 cut(s)	31, 141, 297, 426, 835, 948, 1559, 1702
BmrFI	CCNGG	3 cut(s)	137, 1022, 1153
BmrI	ACTGGG	1 cut(s)	832
BmsI	GCATC	1 cut(s)	1383
BmuI	ACTGGG	1 cut(s)	832
BoxI	GACNNNNGTC	1 cut(s)	1305
BpiI	GAAGAC	1 cut(s)	1337
BplI	GAGNNNNNCTC	2 cut(s)	79, 111
BpmI	CTGGAG	1 cut(s)	744
Bpu10I	CCTNAGC	2 cut(s)	819, 1449
Bpu1102I	GCTNAGC	1 cut(s)	1677
Bpu14I	TTCGAA	1 cut(s)	400
BpuMI	CCSGG	1 cut(s)	137
BsaAI	YACGTR	1 cut(s)	1297
BsaHI	GRCGYC	1 cut(s)	132
BsaJI	CCNNGG	3 cut(s)	337, 793, 1152
BsaWI	WCCGGW	1 cut(s)	1640
BsaXI	ACNNNNNCTCC	2 cut(s)	280, 310
Bsc4I	CCNNNNNNNGG	2 cut(s)	704, 830
Bse118I	RCCGGY	2 cut(s)	1454, 1640
Bse1I	ACTGG	2 cut(s)	838, 1826
Bse3DI	GCAATG	3 cut(s)	678, 1506, 1593
BseBI	CCWGG	2 cut(s)	1022, 1153
BseDI	CCNNGG	3 cut(s)	337, 793, 1152
BseGI	GGATG	3 cut(s)	457, 1259, 1702
BseLI	CCNNNNNNNGG	2 cut(s)	704, 830
BseMI	GCAATG	3 cut(s)	678, 1506, 1593
BseMII	CTCAG	8 cut(s)	77, 195, 810, 1328, 1461, 1463, 1533, 1668
BseNI	ACTGG	2 cut(s)	838, 1826
BseRI	GAGGAG	3 cut(s)	293, 687, 890
BseSI	GKGCMC	1 cut(s)	1529
BseXI	GCAGC	2 cut(s)	334, 613
BseYI	CCCAGC	2 cut(s)	1510, 1562
BsgI	GTGCAG	2 cut(s)	341, 612
Bsh1236I	CGCG	2 cut(s)	126, 1554
BshFI	GGCC	2 cut(s)	1076, 1454
BshNI	GGYRCC	1 cut(s)	833
BshTI	ACCGGT	1 cut(s)	1640
BsiHKAI	GWGCWC	3 cut(s)	22, 557, 1683
BsiSI	CCGG	4 cut(s)	23, 137, 1455, 1641
BslFI	GGGAC	4 cut(s)	119, 410, 1413, 1686
BslI	CCNNNNNNNGG	2 cut(s)	704, 830
BsmAI	GTCTC	3 cut(s)	190, 200, 1099
BsmBI	CGTCTC	2 cut(s)	190, 1099
BsmFI	GGGAC	4 cut(s)	119, 410, 1413, 1686
BsmI	GAATGC	1 cut(s)	1566
BsnI	GGCC	2 cut(s)	1076, 1454
Bsp119I	TTCGAA	1 cut(s)	400
Bsp1286I	GDGCHC	5 cut(s)	22, 557, 825, 1529, 1683
Bsp143I	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
Bsp1720I	GCTNAGC	1 cut(s)	1677
Bsp19I	CCATGG	1 cut(s)	793
BspANI	GGCC	2 cut(s)	1076, 1454
BspCNI	CTCAG	8 cut(s)	78, 196, 811, 1329, 1462, 1462, 1534, 1669
BspFNI	CGCG	2 cut(s)	126, 1554
BspHI	TCATGA	1 cut(s)	744
BspLI	GGNNCC	8 cut(s)	31, 141, 297, 426, 835, 948, 1559, 1702
BspPI	GGATC	4 cut(s)	60, 84, 1552, 1565
BspQI	GCTCTTC	1 cut(s)	693
BspT104I	TTCGAA	1 cut(s)	400
BspT107I	GGYRCC	1 cut(s)	833
BspTI	CTTAAG	1 cut(s)	539
BsrDI	GCAATG	3 cut(s)	678, 1506, 1593
BsrFI	RCCGGY	2 cut(s)	1454, 1640
BsrI	ACTGG	2 cut(s)	838, 1826
BssAI	RCCGGY	2 cut(s)	1454, 1640
BssECI	CCNNGG	3 cut(s)	337, 793, 1152
BssMI	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
BssNI	GRCGYC	1 cut(s)	132
BssT1I	CCWWGG	1 cut(s)	793
Bst2UI	CCWGG	2 cut(s)	1022, 1153
Bst4CI	ACNGT	8 cut(s)	40, 341, 354, 547, 874, 1304, 1441, 1668
Bst6I	CTCTTC	3 cut(s)	242, 489, 693
BstACI	GRCGYC	1 cut(s)	132
BstAFI	CTTAAG	1 cut(s)	539
BstBAI	YACGTR	1 cut(s)	1297
BstBI	TTCGAA	1 cut(s)	400
BstC8I	GCNNGC	5 cut(s)	581, 1018, 1456, 1507, 1805
BstDSI	CCRYGG	2 cut(s)	337, 793
BstENI	CCTNNNNNAGG	1 cut(s)	702
BstF5I	GGATG	3 cut(s)	457, 1259, 1702
BstFNI	CGCG	2 cut(s)	126, 1554
BstHHI	GCGC	1 cut(s)	1554
BstKTI	GATC	8 cut(s)	55, 63, 92, 383, 601, 1117, 1146, 1560
BstMAI	GTCTC	3 cut(s)	190, 200, 1099
BstMBI	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 626, 1022, 1073, 1511
BstNI	CCWGG	2 cut(s)	1022, 1153
BstNSI	RCATGY	1 cut(s)	594
BstPAI	GACNNNNGTC	1 cut(s)	1305
BstSCI	CCNGG	3 cut(s)	135, 1020, 1151
BstSFI	CTRYAG	1 cut(s)	879
BstSLI	GKGCMC	1 cut(s)	1529
BstUI	CGCG	2 cut(s)	126, 1554
BstV1I	GCAGC	2 cut(s)	334, 613
BstV2I	GAAGAC	1 cut(s)	1337
BstX2I	RGATCY	3 cut(s)	89, 380, 1557
BstYI	RGATCY	3 cut(s)	89, 380, 1557
BsuI	GTATCC	1 cut(s)	276
BsuRI	GGCC	2 cut(s)	1076, 1454
BtgI	CCRYGG	2 cut(s)	337, 793
BtsCI	GGATG	3 cut(s)	457, 1259, 1702
BtsIMutI	CAGTG	2 cut(s)	1309, 1819
Cac8I	GCNNGC	5 cut(s)	581, 1018, 1456, 1507, 1805
CaiI	CAGNNNCTG	1 cut(s)	1152
CciI	TCATGA	1 cut(s)	744
CfoI	GCGC	1 cut(s)	1554
Cfr10I	RCCGGY	2 cut(s)	1454, 1640
Cfr13I	GGNCC	2 cut(s)	424, 1700
CseI	GACGC	5 cut(s)	89, 121, 132, 1342, 1415
Csp6I	GTAC	4 cut(s)	355, 480, 1442, 1669
CspAI	ACCGGT	1 cut(s)	1640
CspCI	CAANNNNNGTGG	2 cut(s)	1426, 1461
CviQI	GTAC	4 cut(s)	355, 480, 1442, 1669
DpnI	GATC	8 cut(s)	54, 62, 91, 382, 600, 1116, 1145, 1559
DpnII	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
Eam1104I	CTCTTC	3 cut(s)	242, 489, 693
EarI	CTCTTC	3 cut(s)	242, 489, 693
EciI	GGCGGA	1 cut(s)	65
Ecl136II	GAGCTC	3 cut(s)	20, 555, 1681
Eco130I	CCWWGG	1 cut(s)	793
Eco24I	GRGCYC	4 cut(s)	22, 557, 825, 1683
Eco47I	GGWCC	2 cut(s)	424, 1700
Eco53kI	GAGCTC	3 cut(s)	20, 555, 1681
Eco57I	CTGAAG	2 cut(s)	548, 1910
EcoICRI	GAGCTC	3 cut(s)	20, 555, 1681
EcoNI	CCTNNNNNAGG	1 cut(s)	702
EcoO109I	RGGNCCY	1 cut(s)	424
EcoRII	CCWGG	2 cut(s)	1020, 1151
EcoT14I	CCWWGG	1 cut(s)	793
EcoT38I	GRGCYC	4 cut(s)	22, 557, 825, 1683
ErhI	CCWWGG	1 cut(s)	793
Esp3I	CGTCTC	2 cut(s)	190, 1099
FalI	AAGNNNNNCTT	4 cut(s)	253, 285, 1232, 1264
FaqI	GGGAC	4 cut(s)	119, 410, 1413, 1686
FauI	CCCGC	4 cut(s)	19, 1025, 1547, 1877
FbaI	TGATCA	1 cut(s)	1143
FblI	GTMKAC	5 cut(s)	810, 894, 1007, 1299, 1479
Fnu4HI	GCNGC	6 cut(s)	33, 127, 130, 323, 627, 684
FokI	GGATG	3 cut(s)	464, 1266, 1709
FriOI	GRGCYC	4 cut(s)	22, 557, 825, 1683
Fsp4HI	GCNGC	6 cut(s)	33, 127, 130, 323, 627, 684
FspBI	CTAG	4 cut(s)	849, 1688, 1724, 1829
GlaI	GCGC	1 cut(s)	1553
GluI	GCNGC	6 cut(s)	33, 127, 130, 323, 627, 684
GsaI	CCCAGC	2 cut(s)	1514, 1566
GsuI	CTGGAG	1 cut(s)	744
HaeIII	GGCC	2 cut(s)	1076, 1454
HapII	CCGG	4 cut(s)	23, 137, 1455, 1641
HgaI	GACGC	5 cut(s)	89, 121, 132, 1342, 1415
HhaI	GCGC	1 cut(s)	1554
Hin1I	GRCGYC	1 cut(s)	132
Hin6I	GCGC	1 cut(s)	1552
HinP1I	GCGC	1 cut(s)	1552
HincII	GTYRAC	4 cut(s)	307, 811, 895, 1480
HindII	GTYRAC	4 cut(s)	307, 811, 895, 1480
HinfI	GANTC	8 cut(s)	311, 409, 535, 812, 1004, 1619, 1847, 1878
HpaII	CCGG	4 cut(s)	23, 137, 1455, 1641
HphI	GGTGA	3 cut(s)	608, 895, 1426
Hpy166II	GTNNAC	9 cut(s)	45, 307, 811, 895, 1008, 1220, 1300, 1480, 1783
Hpy188I	TCNGA	7 cut(s)	57, 65, 87, 528, 603, 934, 1172
Hpy188III	TCNNGA	8 cut(s)	745, 761, 818, 1226, 1240, 1607, 1784, 1882
Hpy8I	GTNNAC	9 cut(s)	45, 307, 811, 895, 1008, 1220, 1300, 1480, 1783
Hpy99I	CGWCG	5 cut(s)	13, 83, 163, 896, 1619
HpyAV	CCTTC	7 cut(s)	156, 400, 415, 766, 1066, 1221, 1885
HpyCH4III	ACNGT	8 cut(s)	40, 341, 354, 547, 874, 1304, 1441, 1668
HpyCH4IV	ACGT	4 cut(s)	11, 370, 506, 1296
HpyCH4V	TGCA	8 cut(s)	322, 590, 629, 659, 1277, 1465, 1499, 1661
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 626, 1022, 1073, 1511
HpySE526I	ACGT	4 cut(s)	11, 370, 506, 1296
Hsp92I	GRCGYC	1 cut(s)	132
HspAI	GCGC	1 cut(s)	1552
KroI	GCCGGC	1 cut(s)	1454
KroNI	GCCGGC	1 cut(s)	1456
Ksp22I	TGATCA	1 cut(s)	1143
Kzo9I	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
LguI	GCTCTTC	1 cut(s)	693
LmnI	GCTCC	8 cut(s)	25, 29, 222, 280, 301, 625, 1154, 1894
Lsp1109I	GCAGC	2 cut(s)	334, 613
LweI	GCATC	1 cut(s)	1383
MaeI	CTAG	4 cut(s)	849, 1688, 1724, 1829
MaeII	ACGT	4 cut(s)	11, 370, 506, 1296
MaeIII	GTNAC	4 cut(s)	868, 1084, 1244, 1636
MalI	GATC	8 cut(s)	54, 62, 91, 382, 600, 1116, 1145, 1559
MboI	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
MflI	RGATCY	3 cut(s)	89, 380, 1557
MhlI	GDGCHC	5 cut(s)	22, 557, 825, 1529, 1683
MluCI	AATT	6 cut(s)	234, 253, 474, 886, 1158, 1362
MlyI	GAGTC	4 cut(s)	320, 806, 1013, 1628
MmeI	TCCRAC	1 cut(s)	1294
MroNI	GCCGGC	1 cut(s)	1454
MseI	TTAA	5 cut(s)	287, 540, 564, 1487, 1776
MspCI	CTTAAG	1 cut(s)	539
MspI	CCGG	4 cut(s)	23, 137, 1455, 1641
MspR9I	CCNGG	3 cut(s)	137, 1022, 1153
Mva1269I	GAATGC	1 cut(s)	1566
MvaI	CCWGG	2 cut(s)	1022, 1153
MvnI	CGCG	2 cut(s)	126, 1554
MwoI	GCNNNNNNNGC	5 cut(s)	32, 626, 1022, 1073, 1511
NaeI	GCCGGC	1 cut(s)	1456
NciI	CCSGG	1 cut(s)	137
NcoI	CCATGG	1 cut(s)	793
NdeII	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
NgoMIV	GCCGGC	1 cut(s)	1454
NlaIV	GGNNCC	8 cut(s)	31, 141, 297, 426, 835, 948, 1559, 1702
NmuCI	GTSAC	1 cut(s)	1084
NspI	RCATGY	1 cut(s)	594
NspV	TTCGAA	1 cut(s)	400
PagI	TCATGA	1 cut(s)	744
PciSI	GCTCTTC	1 cut(s)	693
PcsI	WCGNNNNNNNCGW	2 cut(s)	315, 1114
PctI	GAATGC	1 cut(s)	1566
PdiI	GCCGGC	1 cut(s)	1456
PfeI	GAWTC	4 cut(s)	409, 535, 1847, 1878
PinAI	ACCGGT	1 cut(s)	1640
PkrI	GCNGC	6 cut(s)	34, 128, 131, 324, 628, 685
PleI	GAGTC	4 cut(s)	319, 806, 1012, 1627
PpsI	GAGTC	4 cut(s)	319, 806, 1012, 1627
Ppu21I	YACGTR	1 cut(s)	1297
PpuMI	RGGWCCY	1 cut(s)	424
PshAI	GACNNNNGTC	1 cut(s)	1305
Psp124BI	GAGCTC	3 cut(s)	22, 557, 1683
Psp5II	RGGWCCY	1 cut(s)	424
Psp6I	CCWGG	2 cut(s)	1020, 1151
PspFI	CCCAGC	2 cut(s)	1510, 1562
PspGI	CCWGG	2 cut(s)	1020, 1151
PspN4I	GGNNCC	8 cut(s)	31, 141, 297, 426, 835, 948, 1559, 1702
PspPI	GGNCC	2 cut(s)	424, 1700
PspPPI	RGGWCCY	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	1152
PsuI	RGATCY	3 cut(s)	89, 380, 1557
RsaI	GTAC	4 cut(s)	356, 481, 1443, 1670
RsaNI	GTAC	4 cut(s)	355, 480, 1442, 1669
SacI	GAGCTC	3 cut(s)	22, 557, 1683
SalI	GTCGAC	3 cut(s)	809, 893, 1478
SapI	GCTCTTC	1 cut(s)	693
SaqAI	TTAA	5 cut(s)	287, 540, 564, 1487, 1776
SatI	GCNGC	6 cut(s)	33, 127, 130, 323, 627, 684
Sau3AI	GATC	8 cut(s)	52, 60, 89, 380, 598, 1114, 1143, 1557
Sau96I	GGNCC	2 cut(s)	424, 1700
ScaI	AGTACT	1 cut(s)	1443
SchI	GAGTC	4 cut(s)	320, 806, 1013, 1628
ScrFI	CCNGG	3 cut(s)	137, 1022, 1153
SduI	GDGCHC	5 cut(s)	22, 557, 825, 1529, 1683
SfaNI	GCATC	1 cut(s)	1383
SfcI	CTRYAG	1 cut(s)	879
SfuI	TTCGAA	1 cut(s)	400
SinI	GGWCC	2 cut(s)	424, 1700
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
Sse9I	AATT	6 cut(s)	234, 253, 474, 886, 1158, 1362
SspI	AATATT	3 cut(s)	964, 1139, 1190
SspMI	CTAG	4 cut(s)	849, 1688, 1724, 1829
SstI	GAGCTC	3 cut(s)	22, 557, 1683
StyD4I	CCNGG	3 cut(s)	135, 1020, 1151
StyI	CCWWGG	1 cut(s)	793
TaaI	ACNGT	8 cut(s)	40, 341, 354, 547, 874, 1304, 1441, 1668
TaiI	ACGT	4 cut(s)	14, 373, 509, 1299
TaqII	GACCGA	1 cut(s)	1673
TasI	AATT	6 cut(s)	234, 253, 474, 886, 1158, 1362
TatI	WGTACW	2 cut(s)	354, 1441
TauI	GCSGC	4 cut(s)	35, 129, 132, 686
TfiI	GAWTC	4 cut(s)	409, 535, 1847, 1878
Tru1I	TTAA	5 cut(s)	287, 540, 564, 1487, 1776
Tru9I	TTAA	5 cut(s)	287, 540, 564, 1487, 1776
TscAI	CASTG	2 cut(s)	1309, 1826
TseFI	GTSAC	1 cut(s)	1084
TseI	GCWGC	2 cut(s)	322, 626
Tsp45I	GTSAC	1 cut(s)	1084
TspDTI	ATGAA	9 cut(s)	247, 382, 506, 733, 951, 1148, 1275, 1340, 1753
TspGWI	ACGGA	1 cut(s)	880
TspRI	CASTG	2 cut(s)	1309, 1826
Vha464I	CTTAAG	1 cut(s)	539
VpaK11BI	GGWCC	2 cut(s)	424, 1700
XagI	CCTNNNNNAGG	1 cut(s)	702
XceI	RCATGY	1 cut(s)	594
XmiI	GTMKAC	5 cut(s)	810, 894, 1007, 1299, 1479
XspI	CTAG	4 cut(s)	849, 1688, 1724, 1829
ZrmI	AGTACT	1 cut(s)	1443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.