Rmu_sc0000968.1_g000009

Sulfite reductase ferredoxin

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000968.1
Physical Location & Seq
Forward (+)
48979 .. 51543
2565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000968.1_g000009.1.cds

Sequence Viewer

Length: 1506 bp
atgacgacgacgacgactgcgacggcggcggtgctccgggagcctaaggtggagattggaaggtaccaggggctgaggtcagcaaactcgctcgctctcaccgccggaggaagacacgtcactctcttcaacgcttcgtcccggagctcctctctcattcgagccgtctctacgcccgcaaagcctgagactgcgacaaagcgtagcaaggttgaaatattcaaagaacagagcaacttcattagatacccgcttaatgaagagattttgacagatgcccccaatataaacgaagctgctacccaactcatcaagtttcatgggagctaccaacagtacaaccgagatgaacgtggtggaaggtcttactcgtttatgcttcgtaccaagaatccttgtgggaaagtgtcaaaccaactatacttgaccatggatgatcttgccgatcagtttggaattgggacccttcgtttgaccaccagacaaacatttcagctccatggtgttctgaagaaggaccttaagacagtaatgagtagcatcattagaagcatgggttcaactcttggtgcctgtggtgatcttaataggaacgtccttgctcctgctgctccactactaagaaaagattacctttttgcacagaagacagcagagaacattgcggccctgctgactcctcagtctggtttttactatgatgtatgggtggatggagagcagttcctgacagcagaacctcctgaagtaaccaaggtcagaaacgataactctaatggaaaaaccttcactgattcccccgagcccatctatggaactcagttcttgcccaggaagttcaaaattgcagtcactgtgccaacagataactcggtggatattctgacaaatgatattggtgttgtggttgttactgatgataatggggagcctcaagggttcaacatatatgttggtggtggtatgggaaggacacataggttggagtccacattcgcccgtctggcggaaccattgggttatgttcccaaagaggatattctaaaagcaattaagtctattgtagaagttcaacgagatcacggcagaagagatgatcgtaagtatagtagaatgaaatatttgataagtgactgggggattgaaaagtttagaagagaacttgaagacaattattaccaaaagaaatttgagccattccgcaagttgccagagtgggagtttaaaagttacttgggatggcacgaacagggtgatggcagtttattttgtgggcttcatgttgataatgggcgtattgggggaaagatgaagaaggcattacgagaggttatatcaaagtataatttgagtataaggctcacacccaaccagaatattatattgtgtgatattcgcaatgcatggaaacgtcccatcacaacaactcttgcacaggcaggtctgctggtaagtcttctttgtacttcctcttcatcacagatctatatgaattgtggctgctag

Protein Analysis

501

Amino Acids

56.26

Weight (kDa)

9.29

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011058)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 682
Acc36I ACCTGC 1 cut(s) 1430
Acc65I GGTACC 1 cut(s) 63
AccB1I GGYRCC 2 cut(s) 63, 569
AciI CCGC 8 cut(s) 26, 29, 102, 177, 251, 665, 1007, 1201
AcsI RAATTY 1 cut(s) 1187
AcuI CTGAAG 2 cut(s) 530, 765
AfaI GTAC 4 cut(s) 65, 338, 385, 1465
AfiI CCNNNNNNNGG 3 cut(s) 686, 812, 1006
AflII CTTAAG 1 cut(s) 521
AflIII ACRYGT 1 cut(s) 115
AgsI TTSAA 9 cut(s) 130, 215, 223, 561, 841, 943, 1073, 1145, 1166
AjiI CACGTC 1 cut(s) 118
AjnI CCWGG 2 cut(s) 66, 830
AluBI AGCT 4 cut(s) 147, 296, 327, 496
AluI AGCT 4 cut(s) 147, 296, 327, 496
Alw21I GWGCWC 2 cut(s) 36, 149
Alw26I GTCTC 2 cut(s) 172, 182
AlwNI CAGNNNCTG 3 cut(s) 73, 727, 854
Ama87I CYCGRG 1 cut(s) 800
AoxI GGCC 1 cut(s) 666
ApeKI GCWGC 3 cut(s) 296, 608, 1500
ApoI RAATTY 1 cut(s) 1187
ArsI GACNNNNNNTTYG 4 cut(s) 454, 486, 834, 866
Asp718I GGTACC 1 cut(s) 63
AspS9I GGNCC 3 cut(s) 462, 517, 667
AsuC2I CCSGG 2 cut(s) 38, 142
AsuHPI GGTGA 3 cut(s) 91, 590, 1265
AvaI CYCGRG 1 cut(s) 800
AvaII GGWCC 2 cut(s) 462, 517
AxyI CCTNAGG 1 cut(s) 45
BanI GGYRCC 2 cut(s) 63, 569
BanII GRGCYC 2 cut(s) 149, 807
BarI GAAGNNNNNNTAC 2 cut(s) 1456, 1488
BbsI GAAGAC 4 cut(s) 118, 653, 1173, 1448
Bbv12I GWGCWC 2 cut(s) 36, 149
BbvCI CCTCAGC 1 cut(s) 74
BbvI GCAGC 3 cut(s) 283, 595, 1487
BccI CCATC 5 cut(s) 707, 815, 1233, 1250, 1424
BceAI ACGGC 3 cut(s) 39, 149, 1099
BciT130I CCWGG 2 cut(s) 68, 832
BcnI CCSGG 2 cut(s) 38, 142
BcoDI GTCTC 2 cut(s) 172, 182
BfaI CTAG 1 cut(s) 1504
BfrI CTTAAG 1 cut(s) 521
BfuAI ACCTGC 1 cut(s) 1430
BglI GCCNNNNNGGC 1 cut(s) 1004
BglII AGATCT 1 cut(s) 1482
BisI GCNGC 5 cut(s) 27, 297, 609, 666, 1501
BlsI GCNGC 5 cut(s) 28, 298, 610, 667, 1502
Bme1390I CCNGG 4 cut(s) 38, 68, 142, 832
Bme18I GGWCC 2 cut(s) 462, 517
BmeT110I CYCGRG 1 cut(s) 800
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 3 cut(s) 462, 517, 667
BmiI GGNNCC 7 cut(s) 42, 65, 463, 464, 571, 930, 1011
BmrFI CCNGG 4 cut(s) 38, 68, 142, 832
BmrI ACTGGG 1 cut(s) 1144
BmsI GCATC 2 cut(s) 265, 549
BmuI ACTGGG 1 cut(s) 1144
BpiI GAAGAC 4 cut(s) 118, 653, 1173, 1448
BplI GAGNNNNNCTC 2 cut(s) 136, 168
Bpu10I CCTNAGC 1 cut(s) 74
BpuEI CTTGAG 1 cut(s) 918
BpuMI CCSGG 2 cut(s) 38, 142
BsaJI CCNNGG 5 cut(s) 67, 429, 499, 753, 830
Bsc4I CCNNNNNNNGG 3 cut(s) 686, 812, 1006
Bse1I ACTGG 1 cut(s) 1139
Bse21I CCTNAGG 1 cut(s) 45
Bse3DI GCAATG 2 cut(s) 660, 1405
BseBI CCWGG 2 cut(s) 68, 832
BseDI CCNNGG 5 cut(s) 67, 429, 499, 753, 830
BseGI GGATG 3 cut(s) 439, 718, 1244
BseLI CCNNNNNNNGG 3 cut(s) 686, 812, 1006
BseMI GCAATG 2 cut(s) 660, 1405
BseMII CTCAG 4 cut(s) 65, 177, 695, 833
BseNI ACTGG 1 cut(s) 1139
BseRI GAGGAG 2 cut(s) 139, 669
BseXI GCAGC 3 cut(s) 283, 595, 1487
BshFI GGCC 1 cut(s) 668
BshNI GGYRCC 2 cut(s) 63, 569
BsiHKAI GWGCWC 2 cut(s) 36, 149
BsiHKCI CYCGRG 1 cut(s) 800
BsiSI CCGG 3 cut(s) 37, 105, 142
BslFI GGGAC 3 cut(s) 124, 475, 1398
BslI CCNNNNNNNGG 3 cut(s) 686, 812, 1006
BsmAI GTCTC 2 cut(s) 172, 182
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 3 cut(s) 124, 475, 1398
BsnI GGCC 1 cut(s) 668
BsoBI CYCGRG 1 cut(s) 800
Bsp1286I GDGCHC 3 cut(s) 36, 149, 807
Bsp143I GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
Bsp19I CCATGG 2 cut(s) 429, 499
BspACI CCGC 8 cut(s) 26, 29, 102, 177, 251, 665, 1007, 1201
BspANI GGCC 1 cut(s) 668
BspCNI CTCAG 4 cut(s) 66, 178, 694, 832
BspLI GGNNCC 7 cut(s) 42, 65, 463, 464, 571, 930, 1011
BspMI ACCTGC 1 cut(s) 1430
BspT107I GGYRCC 2 cut(s) 63, 569
BspTI CTTAAG 1 cut(s) 521
BsrDI GCAATG 2 cut(s) 660, 1405
BsrI ACTGG 1 cut(s) 1139
BssECI CCNNGG 5 cut(s) 67, 429, 499, 753, 830
BssMI GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
BssT1I CCWWGG 3 cut(s) 429, 499, 753
Bst2UI CCWGG 2 cut(s) 68, 832
Bst4CI ACNGT 3 cut(s) 336, 529, 856
Bst6I CTCTTC 5 cut(s) 131, 255, 1084, 1150, 1477
BstAFI CTTAAG 1 cut(s) 521
BstC8I GCNNGC 2 cut(s) 93, 177
BstDEI CTNAG 6 cut(s) 45, 74, 186, 620, 681, 819
BstDSI CCRYGG 2 cut(s) 429, 499
BstF5I GGATG 3 cut(s) 439, 718, 1244
BstKTI GATC 6 cut(s) 439, 448, 583, 1081, 1099, 1485
BstMAI GTCTC 2 cut(s) 172, 182
BstMBI GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
BstMWI GCNNNNNNNGC 6 cut(s) 26, 40, 101, 181, 608, 1004
BstNI CCWGG 2 cut(s) 68, 832
BstSCI CCNGG 4 cut(s) 36, 66, 140, 830
BstV1I GCAGC 3 cut(s) 283, 595, 1487
BstV2I GAAGAC 4 cut(s) 118, 653, 1173, 1448
BstX2I RGATCY 1 cut(s) 1482
BstYI RGATCY 1 cut(s) 1482
Bsu36I CCTNAGG 1 cut(s) 45
BsuRI GGCC 1 cut(s) 668
BtgI CCRYGG 2 cut(s) 429, 499
BtrI CACGTC 1 cut(s) 118
BtsCI GGATG 3 cut(s) 439, 718, 1244
BtsIMutI CAGTG 2 cut(s) 789, 852
BveI ACCTGC 1 cut(s) 1430
Cac8I GCNNGC 2 cut(s) 93, 177
CaiI CAGNNNCTG 3 cut(s) 73, 727, 854
Cfr13I GGNCC 3 cut(s) 462, 517, 667
Csp6I GTAC 4 cut(s) 64, 337, 384, 1464
CviAII CATG 6 cut(s) 320, 430, 500, 553, 1280, 1404
CviQI GTAC 4 cut(s) 64, 337, 384, 1464
DdeI CTNAG 6 cut(s) 45, 74, 186, 620, 681, 819
DpnI GATC 6 cut(s) 438, 447, 582, 1080, 1098, 1484
DpnII GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
DraI TTTAAA 1 cut(s) 1225
DrdI GACNNNNNNGTC 1 cut(s) 682
DseDI GACNNNNNNGTC 1 cut(s) 682
Eam1104I CTCTTC 5 cut(s) 131, 255, 1084, 1150, 1477
EarI CTCTTC 5 cut(s) 131, 255, 1084, 1150, 1477
EciI GGCGGA 1 cut(s) 1022
Ecl136II GAGCTC 1 cut(s) 147
Eco130I CCWWGG 3 cut(s) 429, 499, 753
Eco24I GRGCYC 2 cut(s) 149, 807
Eco47I GGWCC 2 cut(s) 462, 517
Eco53kI GAGCTC 1 cut(s) 147
Eco57I CTGAAG 2 cut(s) 530, 765
Eco81I CCTNAGG 1 cut(s) 45
Eco88I CYCGRG 1 cut(s) 800
EcoICRI GAGCTC 1 cut(s) 147
EcoO109I RGGNCCY 2 cut(s) 462, 517
EcoRII CCWGG 2 cut(s) 66, 830
EcoT14I CCWWGG 3 cut(s) 429, 499, 753
EcoT22I ATGCAT 1 cut(s) 1405
EcoT38I GRGCYC 2 cut(s) 149, 807
ErhI CCWWGG 3 cut(s) 429, 499, 753
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 6 cut(s) 323, 433, 503, 556, 1283, 1407
FalI AAGNNNNNCTT 2 cut(s) 618, 650
FaqI GGGAC 3 cut(s) 124, 475, 1398
FatI CATG 6 cut(s) 319, 429, 499, 552, 1279, 1403
FauI CCCGC 2 cut(s) 184, 258
Fnu4HI GCNGC 5 cut(s) 27, 297, 609, 666, 1501
FokI GGATG 3 cut(s) 446, 725, 1251
FriOI GRGCYC 2 cut(s) 149, 807
Fsp4HI GCNGC 5 cut(s) 27, 297, 609, 666, 1501
FspBI CTAG 1 cut(s) 1504
GluI GCNGC 5 cut(s) 27, 297, 609, 666, 1501
HaeIII GGCC 1 cut(s) 668
HapII CCGG 3 cut(s) 37, 105, 142
Hin1II CATG 6 cut(s) 323, 433, 503, 556, 1283, 1407
HinfI GANTC 4 cut(s) 391, 676, 794, 986
HpaII CCGG 3 cut(s) 37, 105, 142
HphI GGTGA 3 cut(s) 91, 590, 1265
Hpy166II GTNNAC 1 cut(s) 990
Hpy188I TCNGA 3 cut(s) 510, 761, 885
Hpy188III TCNNGA 2 cut(s) 727, 743
Hpy8I GTNNAC 1 cut(s) 990
Hpy99I CGWCG 4 cut(s) 10, 13, 16, 25
HpyAV CCTTC 7 cut(s) 54, 354, 476, 508, 796, 963, 1309
HpyCH4III ACNGT 3 cut(s) 336, 529, 856
HpyCH4IV ACGT 4 cut(s) 117, 352, 594, 1411
HpyCH4V TGCA 4 cut(s) 641, 848, 1403, 1433
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 40, 101, 181, 608, 1004
HpyF3I CTNAG 6 cut(s) 45, 74, 186, 620, 681, 819
HpySE526I ACGT 4 cut(s) 117, 352, 594, 1411
Hsp92II CATG 6 cut(s) 323, 433, 503, 556, 1283, 1407
KflI GGGWCCC 1 cut(s) 462
KpnI GGTACC 1 cut(s) 67
Kzo9I GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
LmnI GCTCC 9 cut(s) 39, 40, 144, 152, 324, 501, 607, 616, 928
Lsp1109I GCAGC 3 cut(s) 283, 595, 1487
LweI GCATC 2 cut(s) 265, 549
MaeI CTAG 1 cut(s) 1504
MaeII ACGT 4 cut(s) 117, 352, 594, 1411
MaeIII GTNAC 6 cut(s) 118, 748, 850, 910, 1130, 1229
MalI GATC 6 cut(s) 438, 447, 582, 1080, 1098, 1484
MboI GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
MflI RGATCY 1 cut(s) 1482
MhlI GDGCHC 3 cut(s) 36, 149, 807
MluCI AATT 7 cut(s) 456, 843, 1050, 1171, 1187, 1345, 1492
MlyI GAGTC 2 cut(s) 670, 995
MmeI TCCRAC 1 cut(s) 963
MnlI CCTC 9 cut(s) 69, 101, 160, 690, 750, 942, 1027, 1321, 1480
Mph1103I ATGCAT 1 cut(s) 1405
MseI TTAA 5 cut(s) 255, 522, 585, 1053, 1224
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 3 cut(s) 37, 105, 142
MspR9I CCNGG 4 cut(s) 38, 68, 142, 832
MvaI CCWGG 2 cut(s) 68, 832
MwoI GCNNNNNNNGC 6 cut(s) 26, 40, 101, 181, 608, 1004
NciI CCSGG 2 cut(s) 38, 142
NcoI CCATGG 2 cut(s) 429, 499
NdeII GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
NlaIII CATG 6 cut(s) 323, 433, 503, 556, 1283, 1407
NlaIV GGNNCC 7 cut(s) 42, 65, 463, 464, 571, 930, 1011
NmuCI GTSAC 3 cut(s) 118, 850, 1130
NsiI ATGCAT 1 cut(s) 1405
PcsI WCGNNNNNNNCGW 2 cut(s) 11, 17
PfeI GAWTC 2 cut(s) 391, 794
PfoI TCCNGGA 2 cut(s) 36, 140
PkrI GCNGC 5 cut(s) 28, 298, 610, 667, 1502
PleI GAGTC 2 cut(s) 670, 994
PpsI GAGTC 2 cut(s) 670, 994
PpuMI RGGWCCY 2 cut(s) 462, 517
Psp124BI GAGCTC 1 cut(s) 149
Psp5II RGGWCCY 2 cut(s) 462, 517
Psp6I CCWGG 2 cut(s) 66, 830
PspGI CCWGG 2 cut(s) 66, 830
PspN4I GGNNCC 7 cut(s) 42, 65, 463, 464, 571, 930, 1011
PspPI GGNCC 3 cut(s) 462, 517, 667
PspPPI RGGWCCY 2 cut(s) 462, 517
PstNI CAGNNNCTG 3 cut(s) 73, 727, 854
PsuI RGATCY 1 cut(s) 1482
RsaI GTAC 4 cut(s) 65, 338, 385, 1465
RsaNI GTAC 4 cut(s) 64, 337, 384, 1464
SacI GAGCTC 1 cut(s) 149
SaqAI TTAA 5 cut(s) 255, 522, 585, 1053, 1224
SatI GCNGC 5 cut(s) 27, 297, 609, 666, 1501
Sau3AI GATC 6 cut(s) 436, 445, 580, 1078, 1096, 1482
Sau96I GGNCC 3 cut(s) 462, 517, 667
SchI GAGTC 2 cut(s) 670, 995
ScrFI CCNGG 4 cut(s) 38, 68, 142, 832
SduI GDGCHC 3 cut(s) 36, 149, 807
SfaNI GCATC 2 cut(s) 265, 549
SinI GGWCC 2 cut(s) 462, 517
SmlI CTYRAG 2 cut(s) 521, 933
SmoI CTYRAG 2 cut(s) 521, 933
Sse9I AATT 7 cut(s) 456, 843, 1050, 1171, 1187, 1345, 1492
SsiI CCGC 8 cut(s) 26, 29, 102, 177, 251, 665, 1007, 1201
SspI AATATT 3 cut(s) 219, 1121, 1378
SspMI CTAG 1 cut(s) 1504
SstI GAGCTC 1 cut(s) 149
StyD4I CCNGG 4 cut(s) 36, 66, 140, 830
StyI CCWWGG 3 cut(s) 429, 499, 753
TaaI ACNGT 3 cut(s) 336, 529, 856
TaiI ACGT 4 cut(s) 120, 355, 597, 1414
TaqI TCGA 1 cut(s) 160
TasI AATT 7 cut(s) 456, 843, 1050, 1171, 1187, 1345, 1492
TatI WGTACW 2 cut(s) 336, 1463
TauI GCSGC 2 cut(s) 29, 668
TfiI GAWTC 2 cut(s) 391, 794
Tru1I TTAA 5 cut(s) 255, 522, 585, 1053, 1224
Tru9I TTAA 5 cut(s) 255, 522, 585, 1053, 1224
TscAI CASTG 2 cut(s) 796, 859
TseFI GTSAC 3 cut(s) 118, 850, 1130
TseI GCWGC 3 cut(s) 296, 608, 1500
Tsp45I GTSAC 3 cut(s) 118, 850, 1130
TspDTI ATGAA 9 cut(s) 229, 273, 308, 363, 1130, 1268, 1325, 1464, 1505
TspRI CASTG 2 cut(s) 796, 859
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 2 cut(s) 462, 517
XapI RAATTY 1 cut(s) 1187
XspI CTAG 1 cut(s) 1504
Zsp2I ATGCAT 1 cut(s) 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.