Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0011058

Physical Location & Seq

Genomic Coordinates Reverse (-)

56923399 .. 56930500

Gene Structure 7102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG345200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGACGACGACGACTGCGACGGCGGCGGTGCTCCGGGAGCCTAAGGTGGAGATTGGAAGGTACCAGGGGCTGAGGTCAGCAAACTCGCTCGCTCTCACCGCCGGAGGAAGACACGTCACTCTCTTCAACGCTTCGTCTCGGAGCTCCTCTCTCATTCGAGCCGTCTCTACGCCCGCAAAGCCTGAGACTGCGACAAAGCGTAGCAAGGTTGAAATATTCAAAGAACAGAGCAACTTCATTAGATACCCGCTTAATGAAGAGATTTTGACAGATGCCCCCAATATAAACGAAGCTGCTACCCAACTCATCAAGTTTCATGGGAGCTACCAACAGTACAACCGAGATGAACGTGGTGGAAGGTCTTACTCGTTTATGCTTCGTACCAAGAATCCTTGTGGGAAAGTGTCAAACCAACTATACTTGACCATGGATGATCTTGCCGATCAGTTTGGAATTGGGACCCTTCGTTTGACCACCAGACAAACATTTCAGCTCCATGGTGTTCTGAAGAAGGACCTTAAGACAGTAATGAGTAGCATCATTAGAAGCATGGGTTCAACTCTTGGTGCCTGTGGTGATCTTAATAGGAACGTCCTTGCTCCTGCTGCTCCACTACTAAGAAAAGATTACCTTTTCGCACAGAAGACAGCAGAGAACATTGCGGCCCTGCTGACTCCTCAGTCTGGTTTTTACTATGATGTATGGGTGGATGGAGAGCAGTTCCTGACAGCAGAACCTCCTGAAGTAACCAAGGTCAGAAACGATAACTCTAATGGAAAAACCTTCACTGATTCCCCCGAGCCCATCTATGGAACTCAGTTCTTGCCCAGGAAGTTCAAAATTGCAGTCACTGTGCCAACAGATAACTCGGTGGATATTCTGACAAATGATATTGGTGTTGTGGTTGTTACTGATGATAATGGGGAGCCTCAAGGGTTCAACATATATGTTGGAGGTGGTATGGGAAGGACGCATAGGTTGGAGTCCACATTTGCCCGTCTGGCGGAACCATTGGGTTATGTTCCCAAAGAGGATATTCTAAAAGCAATTAAGTCTATTGTAGAAGTTCAACGAGATCACGGCAGAAGAGATGATCGTAAGTATAGTAGAATGAAATATTTGATAAGTGACTGGGGGATTGAAAAGTTTAGAAGAGAACTTGAAGACAATTATTACCAAAAGAAATTTGAGCCATTCCGCAAGTTGCCAGAGTGGGAGTTTAAAAGTTACTTGGGATGGCACGAACAGGGTGATGGCAGTTTATTCTGTGGGCTTCATGTTGATAATGGGCGTATTGGGGGAAAGATGAAGAAGGCATTACGAGAGGTTATATCAAAGTATAATTTGAGTATAAGGCTCACACCCAACCAGAATATTATATTGTGTGATATTCGCAATGCATGGAAACGTCCCATCACAACAACTCTTGCACAGGCCGGTCTGCTGCATCCTAGGTATGTAGACCCCCTTAACCAAACTGCGATGGCATGTCCTGCCTTCCCTCTATGCCCATTGGCAATAACTGAAGCTGAACGGGGAATACCTGACATTCTTAAGCGAGTTCGAGCGGTATTTGAGAAGGTATGGGAAATTAAAAAGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006275 GO:0006323 GO:0006355 GO:0006790 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009295 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010319 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016002 GO:0016020 GO:0016043 GO:0016491 GO:0016667 GO:0016673 GO:0019219 GO:0019222 GO:0019418 GO:0019419 GO:0019424 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031975 GO:0036385 GO:0042644 GO:0042646 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048046 GO:0048519 GO:0048523 GO:0050311 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055114 GO:0060255 GO:0065007 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:1900160 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

534

Amino Acids

60.23

Weight (kDa)

9.38

Isoelectric Point (pI)

42.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	123 - 179	1.1e-14	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	220 - 394	6e-44	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	414 - 467	1e-11	Nitrite/Sulfite reductase ferredoxin-like half domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04590
fragaria_vesca	FvH4_3g28720 FvH4_3g28720 FvH4_3g28720 FvH4_3g28720
malus_domestica	MD03G1173800.v1.1 MD11G1192000.v1.1
prunus_persica	Prupe.4G250500_v2.0.a1
pyrus_communis	pycom03g13140 pycom11g16770
rosa_chinensis	RchiOBHm_Chr5g0052341
rosa_laevigata	RLG00000034823
rosa_multiflora	Rmu_sc0000968.1_g000009
rosa_roxburghii	Rroxscaffold_1G00028250
rosa_rugosa	Rorug05G0272600
rosa_samantha	Rh5AG345200 Rh5BG356300 Rh5CG381600 Rh5DG371400
rosa_wichuraiana	Rw5G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	679
Acc65I	GGTACC	1 cut(s)	60
AccB1I	GGYRCC	2 cut(s)	60, 566
AccBSI	CCGCTC	1 cut(s)	1568
AccI	GTMKAC	1 cut(s)	1461
AciI	CCGC	9 cut(s)	23, 26, 99, 174, 248, 662, 1004, 1198, 1568
AcsI	RAATTY	1 cut(s)	1184
AcuI	CTGAAG	3 cut(s)	527, 762, 1545
AfaI	GTAC	3 cut(s)	62, 335, 382
AfiI	CCNNNNNNNGG	3 cut(s)	683, 809, 1003
AflII	CTTAAG	2 cut(s)	518, 1553
AflIII	ACRYGT	1 cut(s)	112
AgsI	TTSAA	9 cut(s)	127, 212, 220, 558, 838, 940, 1070, 1142, 1163
AjiI	CACGTC	1 cut(s)	115
AjnI	CCWGG	2 cut(s)	63, 827
AluBI	AGCT	5 cut(s)	144, 293, 324, 493, 1529
AluI	AGCT	5 cut(s)	144, 293, 324, 493, 1529
Alw21I	GWGCWC	2 cut(s)	33, 146
Alw26I	GTCTC	3 cut(s)	141, 169, 179
AlwNI	CAGNNNCTG	3 cut(s)	70, 724, 851
Ama87I	CYCGRG	1 cut(s)	797
AoxI	GGCC	2 cut(s)	663, 1434
ApeKI	GCWGC	3 cut(s)	293, 605, 1444
ApoI	RAATTY	1 cut(s)	1184
ArsI	GACNNNNNNTTYG	4 cut(s)	451, 483, 831, 863
Asp718I	GGTACC	1 cut(s)	60
AspA2I	CCTAGG	1 cut(s)	1451
AspS9I	GGNCC	3 cut(s)	459, 514, 664
AsuC2I	CCSGG	1 cut(s)	35
AsuHPI	GGTGA	3 cut(s)	88, 587, 1262
AvaI	CYCGRG	1 cut(s)	797
AvaII	GGWCC	2 cut(s)	459, 514
AvrII	CCTAGG	1 cut(s)	1451
AxyI	CCTNAGG	1 cut(s)	42
BanI	GGYRCC	2 cut(s)	60, 566
BanII	GRGCYC	2 cut(s)	146, 804
BbsI	GAAGAC	3 cut(s)	115, 650, 1170
Bbv12I	GWGCWC	2 cut(s)	33, 146
BbvCI	CCTCAGC	1 cut(s)	71
BbvI	GCAGC	3 cut(s)	280, 592, 1431
BccI	CCATC	6 cut(s)	704, 812, 1230, 1247, 1421, 1477
BceAI	ACGGC	3 cut(s)	36, 146, 1096
BciT130I	CCWGG	2 cut(s)	65, 829
BcnI	CCSGG	1 cut(s)	35
BcoDI	GTCTC	3 cut(s)	141, 169, 179
BfaI	CTAG	1 cut(s)	1452
BfrI	CTTAAG	2 cut(s)	518, 1553
BglI	GCCNNNNNGGC	1 cut(s)	1001
BisI	GCNGC	5 cut(s)	24, 294, 606, 663, 1445
BlnI	CCTAGG	1 cut(s)	1451
BlsI	GCNGC	5 cut(s)	25, 295, 607, 664, 1446
Bme1390I	CCNGG	3 cut(s)	35, 65, 829
Bme18I	GGWCC	2 cut(s)	459, 514
BmeT110I	CYCGRG	1 cut(s)	797
BmgBI	CACGTC	1 cut(s)	115
BmgT120I	GGNCC	3 cut(s)	459, 514, 664
BmiI	GGNNCC	7 cut(s)	39, 62, 460, 461, 568, 927, 1008
BmrFI	CCNGG	3 cut(s)	35, 65, 829
BmrI	ACTGGG	1 cut(s)	1141
BmsI	GCATC	3 cut(s)	262, 546, 1456
BmuI	ACTGGG	1 cut(s)	1141
BpiI	GAAGAC	3 cut(s)	115, 650, 1170
BplI	GAGNNNNNCTC	2 cut(s)	133, 165
Bpu10I	CCTNAGC	1 cut(s)	71
BpuEI	CTTGAG	1 cut(s)	915
BpuMI	CCSGG	1 cut(s)	35
BsaJI	CCNNGG	6 cut(s)	64, 426, 496, 750, 827, 1451
Bsc4I	CCNNNNNNNGG	3 cut(s)	683, 809, 1003
Bse118I	RCCGGY	1 cut(s)	1436
Bse1I	ACTGG	1 cut(s)	1136
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	2 cut(s)	657, 1402
BseBI	CCWGG	2 cut(s)	65, 829
BseDI	CCNNGG	6 cut(s)	64, 426, 496, 750, 827, 1451
BseGI	GGATG	4 cut(s)	436, 715, 1241, 1447
BseLI	CCNNNNNNNGG	3 cut(s)	683, 809, 1003
BseMI	GCAATG	2 cut(s)	657, 1402
BseMII	CTCAG	4 cut(s)	62, 174, 692, 830
BseNI	ACTGG	1 cut(s)	1136
BseRI	GAGGAG	2 cut(s)	136, 666
BseXI	GCAGC	3 cut(s)	280, 592, 1431
BshFI	GGCC	2 cut(s)	665, 1436
BshNI	GGYRCC	2 cut(s)	60, 566
BsiHKAI	GWGCWC	2 cut(s)	33, 146
BsiHKCI	CYCGRG	1 cut(s)	797
BsiSI	CCGG	3 cut(s)	34, 102, 1437
BslFI	GGGAC	2 cut(s)	472, 1395
BslI	CCNNNNNNNGG	3 cut(s)	683, 809, 1003
BsmAI	GTCTC	3 cut(s)	141, 169, 179
BsmBI	CGTCTC	2 cut(s)	141, 169
BsmFI	GGGAC	2 cut(s)	472, 1395
BsnI	GGCC	2 cut(s)	665, 1436
BsoBI	CYCGRG	1 cut(s)	797
Bsp1286I	GDGCHC	3 cut(s)	33, 146, 804
Bsp143I	GATC	5 cut(s)	433, 442, 577, 1075, 1093
Bsp19I	CCATGG	2 cut(s)	426, 496
BspACI	CCGC	9 cut(s)	23, 26, 99, 174, 248, 662, 1004, 1198, 1568
BspANI	GGCC	2 cut(s)	665, 1436
BspCNI	CTCAG	4 cut(s)	63, 175, 691, 829
BspLI	GGNNCC	7 cut(s)	39, 62, 460, 461, 568, 927, 1008
BspT107I	GGYRCC	2 cut(s)	60, 566
BspTI	CTTAAG	2 cut(s)	518, 1553
BsrBI	CCGCTC	1 cut(s)	1568
BsrDI	GCAATG	2 cut(s)	657, 1402
BsrFI	RCCGGY	1 cut(s)	1436
BsrI	ACTGG	1 cut(s)	1136
BssAI	RCCGGY	1 cut(s)	1436
BssECI	CCNNGG	6 cut(s)	64, 426, 496, 750, 827, 1451
BssMI	GATC	5 cut(s)	433, 442, 577, 1075, 1093
BssT1I	CCWWGG	4 cut(s)	426, 496, 750, 1451
Bst2UI	CCWGG	2 cut(s)	65, 829
Bst4CI	ACNGT	3 cut(s)	333, 526, 853
Bst6I	CTCTTC	4 cut(s)	128, 252, 1081, 1147
BstAFI	CTTAAG	2 cut(s)	518, 1553
BstAPI	GCANNNNNTGC	1 cut(s)	1493
BstC8I	GCNNGC	2 cut(s)	90, 174
BstDEI	CTNAG	6 cut(s)	42, 71, 183, 617, 678, 816
BstDSI	CCRYGG	2 cut(s)	426, 496
BstF5I	GGATG	4 cut(s)	436, 715, 1241, 1447
BstKTI	GATC	5 cut(s)	436, 445, 580, 1078, 1096
BstMAI	GTCTC	3 cut(s)	141, 169, 179
BstMBI	GATC	5 cut(s)	433, 442, 577, 1075, 1093
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 37, 98, 178, 605, 1001, 1493
BstNI	CCWGG	2 cut(s)	65, 829
BstNSI	RCATGY	1 cut(s)	1491
BstSCI	CCNGG	3 cut(s)	33, 63, 827
BstV1I	GCAGC	3 cut(s)	280, 592, 1431
BstV2I	GAAGAC	3 cut(s)	115, 650, 1170
Bsu36I	CCTNAGG	1 cut(s)	42
BsuRI	GGCC	2 cut(s)	665, 1436
BtgI	CCRYGG	2 cut(s)	426, 496
BtgZI	GCGATG	1 cut(s)	1496
BtrI	CACGTC	1 cut(s)	115
BtsCI	GGATG	4 cut(s)	436, 715, 1241, 1447
BtsIMutI	CAGTG	2 cut(s)	786, 849
Cac8I	GCNNGC	2 cut(s)	90, 174
CaiI	CAGNNNCTG	3 cut(s)	70, 724, 851
Cfr10I	RCCGGY	1 cut(s)	1436
Cfr13I	GGNCC	3 cut(s)	459, 514, 664
CseI	GACGC	1 cut(s)	979
Csp6I	GTAC	3 cut(s)	61, 334, 381
CviAII	CATG	7 cut(s)	317, 427, 497, 550, 1277, 1401, 1488
CviQI	GTAC	3 cut(s)	61, 334, 381
DdeI	CTNAG	6 cut(s)	42, 71, 183, 617, 678, 816
DpnI	GATC	5 cut(s)	435, 444, 579, 1077, 1095
DpnII	GATC	5 cut(s)	433, 442, 577, 1075, 1093
DraI	TTTAAA	1 cut(s)	1222
DrdI	GACNNNNNNGTC	1 cut(s)	679
DseDI	GACNNNNNNGTC	1 cut(s)	679
Eam1104I	CTCTTC	4 cut(s)	128, 252, 1081, 1147
EarI	CTCTTC	4 cut(s)	128, 252, 1081, 1147
EciI	GGCGGA	1 cut(s)	1019
Ecl136II	GAGCTC	1 cut(s)	144
Eco130I	CCWWGG	4 cut(s)	426, 496, 750, 1451
Eco24I	GRGCYC	2 cut(s)	146, 804
Eco47I	GGWCC	2 cut(s)	459, 514
Eco53kI	GAGCTC	1 cut(s)	144
Eco57I	CTGAAG	3 cut(s)	527, 762, 1545
Eco81I	CCTNAGG	1 cut(s)	42
Eco88I	CYCGRG	1 cut(s)	797
EcoICRI	GAGCTC	1 cut(s)	144
EcoO109I	RGGNCCY	2 cut(s)	459, 514
EcoRII	CCWGG	2 cut(s)	63, 827
EcoT14I	CCWWGG	4 cut(s)	426, 496, 750, 1451
EcoT22I	ATGCAT	1 cut(s)	1402
EcoT38I	GRGCYC	2 cut(s)	146, 804
ErhI	CCWWGG	4 cut(s)	426, 496, 750, 1451
Esp3I	CGTCTC	2 cut(s)	141, 169
FaeI	CATG	7 cut(s)	320, 430, 500, 553, 1280, 1404, 1491
FalI	AAGNNNNNCTT	2 cut(s)	615, 647
FaqI	GGGAC	2 cut(s)	472, 1395
FatI	CATG	7 cut(s)	316, 426, 496, 549, 1276, 1400, 1487
FauI	CCCGC	2 cut(s)	181, 255
FblI	GTMKAC	1 cut(s)	1461
Fnu4HI	GCNGC	5 cut(s)	24, 294, 606, 663, 1445
FokI	GGATG	4 cut(s)	443, 722, 1248, 1434
FriOI	GRGCYC	2 cut(s)	146, 804
Fsp4HI	GCNGC	5 cut(s)	24, 294, 606, 663, 1445
FspBI	CTAG	1 cut(s)	1452
GluI	GCNGC	5 cut(s)	24, 294, 606, 663, 1445
HaeIII	GGCC	2 cut(s)	665, 1436
HapII	CCGG	3 cut(s)	34, 102, 1437
HgaI	GACGC	1 cut(s)	979
Hin1II	CATG	7 cut(s)	320, 430, 500, 553, 1280, 1404, 1491
HinfI	GANTC	4 cut(s)	388, 673, 791, 983
HpaII	CCGG	3 cut(s)	34, 102, 1437
HphI	GGTGA	3 cut(s)	88, 587, 1262
Hpy166II	GTNNAC	2 cut(s)	987, 1462
Hpy188I	TCNGA	4 cut(s)	141, 507, 758, 882
Hpy188III	TCNNGA	2 cut(s)	724, 740
Hpy8I	GTNNAC	2 cut(s)	987, 1462
Hpy99I	CGWCG	3 cut(s)	10, 13, 22
HpyAV	CCTTC	9 cut(s)	51, 351, 473, 505, 793, 960, 1306, 1507, 1573
HpyCH4III	ACNGT	3 cut(s)	333, 526, 853
HpyCH4IV	ACGT	4 cut(s)	114, 349, 591, 1408
HpyCH4V	TGCA	4 cut(s)	845, 1400, 1430, 1447
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 37, 98, 178, 605, 1001, 1493
HpyF3I	CTNAG	6 cut(s)	42, 71, 183, 617, 678, 816
HpySE526I	ACGT	4 cut(s)	114, 349, 591, 1408
Hsp92II	CATG	7 cut(s)	320, 430, 500, 553, 1280, 1404, 1491
KflI	GGGWCCC	1 cut(s)	459
KpnI	GGTACC	1 cut(s)	64
Kzo9I	GATC	5 cut(s)	433, 442, 577, 1075, 1093
LmnI	GCTCC	9 cut(s)	36, 37, 141, 149, 321, 498, 604, 613, 925
Lsp1109I	GCAGC	3 cut(s)	280, 592, 1431
LweI	GCATC	3 cut(s)	262, 546, 1456
MaeI	CTAG	1 cut(s)	1452
MaeII	ACGT	4 cut(s)	114, 349, 591, 1408
MaeIII	GTNAC	6 cut(s)	115, 745, 847, 907, 1127, 1226
MalI	GATC	5 cut(s)	435, 444, 579, 1077, 1095
MbiI	CCGCTC	1 cut(s)	1568
MboI	GATC	5 cut(s)	433, 442, 577, 1075, 1093
MboII	GAAGA	9 cut(s)	115, 120, 269, 520, 655, 1098, 1164, 1175, 1321
MhlI	GDGCHC	3 cut(s)	33, 146, 804
MluCI	AATT	7 cut(s)	453, 840, 1047, 1168, 1184, 1342, 1590
MlyI	GAGTC	2 cut(s)	667, 992
MmeI	TCCRAC	2 cut(s)	931, 960
Mph1103I	ATGCAT	1 cut(s)	1402
MseI	TTAA	8 cut(s)	252, 519, 582, 1050, 1221, 1470, 1554, 1593
MspCI	CTTAAG	2 cut(s)	518, 1553
MspI	CCGG	3 cut(s)	34, 102, 1437
MspR9I	CCNGG	3 cut(s)	35, 65, 829
MvaI	CCWGG	2 cut(s)	65, 829
MwoI	GCNNNNNNNGC	7 cut(s)	23, 37, 98, 178, 605, 1001, 1493
NciI	CCSGG	1 cut(s)	35
NcoI	CCATGG	2 cut(s)	426, 496
NdeII	GATC	5 cut(s)	433, 442, 577, 1075, 1093
NlaIII	CATG	7 cut(s)	320, 430, 500, 553, 1280, 1404, 1491
NlaIV	GGNNCC	7 cut(s)	39, 62, 460, 461, 568, 927, 1008
NmuCI	GTSAC	3 cut(s)	115, 847, 1127
NsiI	ATGCAT	1 cut(s)	1402
NspI	RCATGY	1 cut(s)	1491
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PfeI	GAWTC	2 cut(s)	388, 791
PfoI	TCCNGGA	1 cut(s)	33
PkrI	GCNGC	5 cut(s)	25, 295, 607, 664, 1446
PleI	GAGTC	2 cut(s)	667, 991
PpsI	GAGTC	2 cut(s)	667, 991
PpuMI	RGGWCCY	2 cut(s)	459, 514
Psp124BI	GAGCTC	1 cut(s)	146
Psp5II	RGGWCCY	2 cut(s)	459, 514
Psp6I	CCWGG	2 cut(s)	63, 827
PspGI	CCWGG	2 cut(s)	63, 827
PspN4I	GGNNCC	7 cut(s)	39, 62, 460, 461, 568, 927, 1008
PspPI	GGNCC	3 cut(s)	459, 514, 664
PspPPI	RGGWCCY	2 cut(s)	459, 514
PsrI	GAACNNNNNNTAC	2 cut(s)	1524, 1556
PstNI	CAGNNNCTG	3 cut(s)	70, 724, 851
RsaI	GTAC	3 cut(s)	62, 335, 382
RsaNI	GTAC	3 cut(s)	61, 334, 381
SacI	GAGCTC	1 cut(s)	146
SaqAI	TTAA	8 cut(s)	252, 519, 582, 1050, 1221, 1470, 1554, 1593
SatI	GCNGC	5 cut(s)	24, 294, 606, 663, 1445
Sau3AI	GATC	5 cut(s)	433, 442, 577, 1075, 1093
Sau96I	GGNCC	3 cut(s)	459, 514, 664
SchI	GAGTC	2 cut(s)	667, 992
ScrFI	CCNGG	3 cut(s)	35, 65, 829
SduI	GDGCHC	3 cut(s)	33, 146, 804
SfaNI	GCATC	3 cut(s)	262, 546, 1456
SinI	GGWCC	2 cut(s)	459, 514
SmlI	CTYRAG	3 cut(s)	518, 930, 1553
SmoI	CTYRAG	3 cut(s)	518, 930, 1553
Sse9I	AATT	7 cut(s)	453, 840, 1047, 1168, 1184, 1342, 1590
SsiI	CCGC	9 cut(s)	23, 26, 99, 174, 248, 662, 1004, 1198, 1568
SspI	AATATT	3 cut(s)	216, 1118, 1375
SspMI	CTAG	1 cut(s)	1452
SstI	GAGCTC	1 cut(s)	146
StyD4I	CCNGG	3 cut(s)	33, 63, 827
StyI	CCWWGG	4 cut(s)	426, 496, 750, 1451
TaaI	ACNGT	3 cut(s)	333, 526, 853
TaiI	ACGT	4 cut(s)	117, 352, 594, 1411
TaqI	TCGA	2 cut(s)	157, 1564
TasI	AATT	7 cut(s)	453, 840, 1047, 1168, 1184, 1342, 1590
TatI	WGTACW	1 cut(s)	333
TauI	GCSGC	2 cut(s)	26, 665
TfiI	GAWTC	2 cut(s)	388, 791
Tru1I	TTAA	8 cut(s)	252, 519, 582, 1050, 1221, 1470, 1554, 1593
Tru9I	TTAA	8 cut(s)	252, 519, 582, 1050, 1221, 1470, 1554, 1593
TscAI	CASTG	2 cut(s)	793, 856
TseFI	GTSAC	3 cut(s)	115, 847, 1127
TseI	GCWGC	3 cut(s)	293, 605, 1444
Tsp45I	GTSAC	3 cut(s)	115, 847, 1127
TspDTI	ATGAA	7 cut(s)	226, 270, 305, 360, 1127, 1265, 1322
TspRI	CASTG	2 cut(s)	793, 856
Vha464I	CTTAAG	2 cut(s)	518, 1553
VpaK11BI	GGWCC	2 cut(s)	459, 514
XapI	RAATTY	1 cut(s)	1184
XceI	RCATGY	1 cut(s)	1491
XmaJI	CCTAGG	1 cut(s)	1451
XmiI	GTMKAC	1 cut(s)	1461
XspI	CTAG	1 cut(s)	1452
Zsp2I	ATGCAT	1 cut(s)	1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.