Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0011058

Physical Location & Seq

Genomic Coordinates Reverse (-)

55266927 .. 55271112

Gene Structure 4186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G032580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGTGCAATAGAGGAAAAGGATGTCTAATTTTTTGCTTACTGATTTTCTGCCCTCCCGCAAAGCCTGAGACTGCGACAAAGCGTAGCAAGGTTGAAATATTCAAAGAACAGAGCAACTTCATTAGATACCCGCTTAATGAAGAGATTTTGACAGATGCCCCCAATATAAACGAAGCTGCTACCCAACTCATCAAGTTTCATGGGAGCTACCAACAGTACAACCGAGATGAACGTGGTGGAAGGTCTTACTCGTTTATGCTTCGTACCAAGAATCCTTGTGGGAAAGTGTCAAACCAACTATACTTGACCATGGATGATCTTGCCGATCAGTTTGGAATTGGGACCCTTCGTTTGACCACCAGACAAACATTTCAGCTCCATGGTGTTCTGAAGAAGGACCTTAAGACAGTAATGAGTAGCATCATTAGAAGCATGGGTTCAACTCTTGGTGCCTGTGGTGATCTTAATAGGAACGTCCTTGCTCCTGCTGCTCCACTACTAAGAAAAGATTACCTTTTCGCACAGAAGACAGCAGAGAACATTGCGGCCCTGCTGACTCCTCAGTCTGGTTTTTACTATGATGTATGGGTGGATGGAGAGCAGTTCCTGACAGCAGAACCTCCTGAAGTAACCAAGGTCAGAAACGATAACTCTAATGGAAAAACCTTCACTGATTCCCCCGAGCCCATCTATGGAACTCAGTTCTTGCCCAGGAAGTTCAAAATTGCAGTCACTGTGCCAACAGATAACTCGGTGGATATTCTGACAAATGATATTGGTGTTGTGGTTGTTACTGATGATAATGGGGAGCCTCAAGGGTTCAACATATATGTTGGTGGTGGTATGGGAAGGACACATAGGTTGGAGTCCACATTCGCCCGTCTGGCGGAACCATTGGGTTATGTTCCCAAAGAGGATATTCTAAAAGCAATTAAGTCTATTGTAGAAGTTCAACGAGATCACGGCAGAAGAGATGATCGTAAGTATAGTAGAATGAAATATTTGATAAGTGACTGGGGGATTGAAAAGTTTAGAAGAGAACTTGAAGACAATTATTACCAAAAGAAATTTGAGCCATTCCGCAAGTTGCCAGAGTGGGAGTTTAAAAGTTACTTGGGATGGCACGAACAGGGTGATGGCAGTTTATTTTGTGGGCTTCATGTTGATAATGGGCGTATTGGGGGAAAGATGAAGAAGGCATTACGAGAGGTTATATCAAAGTATAATTTGAGTATAAGGCTCACACCCAACCAGAATATTATATTGTGTGATATTCGCAATGCATGGAAACGTCCCATCACAACAACTCTTGCACAGGCCGGTCTGCTGCATCCTAGGTATGTAGACCCCCTTAACCAAACTGCGATGGCATGTCCAGCCTTCCCTCTATGCCCATTGGCAATAACTGAAGCTGAACGGGGAATACCTGACATTCTTAAGCGAGTTCGAGCAGTATTTGAGAAGGTTGGTCTAAAGTACAATGAATCTGTTGTTATAAGGGTGACTGGCTGCCCCAACGGTTGTGCTAGGCCATACATGGCTGAACTTGGACTAGTGGGTGATGGTCCCAACAGCTATCAGATATGGCTTGGAGGGACACCCAATCAAACCTCAATAGCAAAAACCTTCATGAACAAGGTCAAGGTTCAAGACCTCGAAAAAGTTTTTGAACCTTTATTTTATCATTGGAAACGCAAGCGACAAGCTAAAGAATCATTCGGCGACTTCACAATACGTATGGGATTTGAGAAACTTCAAGAGTTGGTTGACAAATGGGAAGGACCAGAGTTGGCACCAACACGTTACAACCTGAAGCTTTTTGCTGATAAGGAGACGTATGAAGCAGTTGATGAACTTGCAAAGTTGCAGGGCAAGAGTGCTCATCAATTAGCCATGGAAGTCATCCGCAATTTTGTTGCTTCCCAGCAAAATGGGAAAAGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006275 GO:0006323 GO:0006355 GO:0006790 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009295 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010319 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016002 GO:0016020 GO:0016043 GO:0016491 GO:0016667 GO:0016673 GO:0019219 GO:0019222 GO:0019418 GO:0019419 GO:0019424 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031975 GO:0036385 GO:0042644 GO:0042646 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048046 GO:0048519 GO:0048523 GO:0050311 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055114 GO:0060255 GO:0065007 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:1900160 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

648

Amino Acids

73.53

Weight (kDa)

9.02

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	84 - 139	1.4e-14	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	181 - 355	8.8e-44	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	375 - 428	1.4e-11	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	454 - 591	1.1e-10	Nitrite and sulphite reductase 4Fe-4S domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04590
fragaria_vesca	FvH4_3g28720 FvH4_3g28720 FvH4_3g28720 FvH4_3g28720
malus_domestica	MD03G1173800.v1.1 MD11G1192000.v1.1
prunus_persica	Prupe.4G250500_v2.0.a1
pyrus_communis	pycom03g13140 pycom11g16770
rosa_chinensis	RchiOBHm_Chr5g0052341
rosa_laevigata	RLG00000034823
rosa_multiflora	Rmu_sc0000968.1_g000009
rosa_roxburghii	Rroxscaffold_1G00028250
rosa_rugosa	Rorug05G0272600
rosa_samantha	Rh5AG345200 Rh5BG356300 Rh5CG381600 Rh5DG371400
rosa_wichuraiana	Rw5G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1496
AasI	GACNNNNNNGTC	1 cut(s)	562
AccB1I	GGYRCC	2 cut(s)	449, 1792
AccI	GTMKAC	1 cut(s)	1344
AciI	CCGC	6 cut(s)	57, 131, 545, 887, 1081, 1906
AcsI	RAATTY	1 cut(s)	1067
AcuI	CTGAAG	4 cut(s)	410, 645, 1428, 1832
AfaI	GTAC	3 cut(s)	218, 265, 1478
AfiI	CCNNNNNNNGG	3 cut(s)	566, 692, 886
AflII	CTTAAG	2 cut(s)	401, 1436
AflIII	ACRYGT	1 cut(s)	1799
AhlI	ACTAGT	1 cut(s)	1552
AjnI	CCWGG	1 cut(s)	710
AluBI	AGCT	7 cut(s)	176, 207, 376, 1412, 1575, 1706, 1816
AluI	AGCT	7 cut(s)	176, 207, 376, 1412, 1575, 1706, 1816
Alw21I	GWGCWC	1 cut(s)	1882
Alw26I	GTCTC	2 cut(s)	62, 1826
AlwNI	CAGNNNCTG	2 cut(s)	607, 734
Ama87I	CYCGRG	1 cut(s)	680
AoxI	GGCC	3 cut(s)	546, 1317, 1529
ApeKI	GCWGC	4 cut(s)	176, 488, 1327, 1509
ApoI	RAATTY	1 cut(s)	1067
ArsI	GACNNNNNNTTYG	4 cut(s)	334, 366, 714, 746
AspA2I	CCTAGG	1 cut(s)	1334
AspS9I	GGNCC	5 cut(s)	342, 397, 547, 1565, 1781
AsuHPI	GGTGA	4 cut(s)	470, 1145, 1513, 1571
AvaI	CYCGRG	1 cut(s)	680
AvaII	GGWCC	4 cut(s)	342, 397, 1565, 1781
AvrII	CCTAGG	1 cut(s)	1334
BanI	GGYRCC	2 cut(s)	449, 1792
BanII	GRGCYC	1 cut(s)	687
BbsI	GAAGAC	2 cut(s)	533, 1053
Bbv12I	GWGCWC	1 cut(s)	1882
BbvI	GCAGC	4 cut(s)	163, 475, 1314, 1496
BccI	CCATC	7 cut(s)	587, 695, 1113, 1130, 1304, 1360, 1556
BceAI	ACGGC	1 cut(s)	979
BciT130I	CCWGG	1 cut(s)	712
BcoDI	GTCTC	2 cut(s)	62, 1826
BcuI	ACTAGT	1 cut(s)	1552
BfaI	CTAG	3 cut(s)	1335, 1527, 1553
BfrI	CTTAAG	2 cut(s)	401, 1436
BglI	GCCNNNNNGGC	1 cut(s)	884
BisI	GCNGC	5 cut(s)	177, 489, 546, 1328, 1510
BlnI	CCTAGG	1 cut(s)	1334
BlsI	GCNGC	5 cut(s)	178, 490, 547, 1329, 1511
Bme1390I	CCNGG	1 cut(s)	712
Bme18I	GGWCC	4 cut(s)	342, 397, 1565, 1781
BmeT110I	CYCGRG	1 cut(s)	680
BmgT120I	GGNCC	5 cut(s)	342, 397, 547, 1565, 1781
BmiI	GGNNCC	7 cut(s)	343, 344, 451, 810, 891, 1567, 1794
BmrFI	CCNGG	1 cut(s)	712
BmrI	ACTGGG	1 cut(s)	1024
BmsI	GCATC	3 cut(s)	145, 429, 1339
BmuI	ACTGGG	1 cut(s)	1024
BpiI	GAAGAC	2 cut(s)	533, 1053
BpuEI	CTTGAG	1 cut(s)	798
BsaAI	YACGTR	1 cut(s)	1736
BsaJI	CCNNGG	6 cut(s)	309, 379, 633, 710, 1334, 1893
Bsc4I	CCNNNNNNNGG	3 cut(s)	566, 692, 886
Bse118I	RCCGGY	1 cut(s)	1319
Bse1I	ACTGG	2 cut(s)	1019, 1510
Bse3DI	GCAATG	2 cut(s)	540, 1285
BseBI	CCWGG	1 cut(s)	712
BseDI	CCNNGG	6 cut(s)	309, 379, 633, 710, 1334, 1893
BseGI	GGATG	6 cut(s)	26, 319, 598, 1124, 1330, 1902
BseLI	CCNNNNNNNGG	3 cut(s)	566, 692, 886
BseMI	GCAATG	2 cut(s)	540, 1285
BseMII	CTCAG	3 cut(s)	57, 575, 713
BseNI	ACTGG	2 cut(s)	1019, 1510
BseRI	GAGGAG	1 cut(s)	549
BseXI	GCAGC	4 cut(s)	163, 475, 1314, 1496
BseYI	CCCAGC	1 cut(s)	1923
BshFI	GGCC	3 cut(s)	548, 1319, 1531
BshNI	GGYRCC	2 cut(s)	449, 1792
BsiHKAI	GWGCWC	1 cut(s)	1882
BsiHKCI	CYCGRG	1 cut(s)	680
BsiSI	CCGG	1 cut(s)	1320
BslFI	GGGAC	4 cut(s)	355, 1278, 1551, 1609
BslI	CCNNNNNNNGG	3 cut(s)	566, 692, 886
BsmAI	GTCTC	2 cut(s)	62, 1826
BsmBI	CGTCTC	1 cut(s)	1826
BsmFI	GGGAC	4 cut(s)	355, 1278, 1551, 1609
BsnI	GGCC	3 cut(s)	548, 1319, 1531
BsoBI	CYCGRG	1 cut(s)	680
Bsp1286I	GDGCHC	2 cut(s)	687, 1882
Bsp143I	GATC	5 cut(s)	316, 325, 460, 958, 976
Bsp19I	CCATGG	3 cut(s)	309, 379, 1893
BspACI	CCGC	6 cut(s)	57, 131, 545, 887, 1081, 1906
BspANI	GGCC	3 cut(s)	548, 1319, 1531
BspCNI	CTCAG	3 cut(s)	58, 574, 712
BspHI	TCATGA	1 cut(s)	1629
BspLI	GGNNCC	7 cut(s)	343, 344, 451, 810, 891, 1567, 1794
BspT107I	GGYRCC	2 cut(s)	449, 1792
BspTI	CTTAAG	2 cut(s)	401, 1436
BsrDI	GCAATG	2 cut(s)	540, 1285
BsrFI	RCCGGY	1 cut(s)	1319
BsrI	ACTGG	2 cut(s)	1019, 1510
BssAI	RCCGGY	1 cut(s)	1319
BssECI	CCNNGG	6 cut(s)	309, 379, 633, 710, 1334, 1893
BssMI	GATC	5 cut(s)	316, 325, 460, 958, 976
BssT1I	CCWWGG	5 cut(s)	309, 379, 633, 1334, 1893
Bst2UI	CCWGG	1 cut(s)	712
Bst4CI	ACNGT	4 cut(s)	216, 409, 736, 1520
Bst6I	CTCTTC	3 cut(s)	135, 964, 1030
BstAFI	CTTAAG	2 cut(s)	401, 1436
BstBAI	YACGTR	1 cut(s)	1736
BstC8I	GCNNGC	1 cut(s)	1697
BstDEI	CTNAG	4 cut(s)	66, 500, 561, 699
BstDSI	CCRYGG	3 cut(s)	309, 379, 1893
BstF5I	GGATG	6 cut(s)	26, 319, 598, 1124, 1330, 1902
BstKTI	GATC	5 cut(s)	319, 328, 463, 961, 979
BstMAI	GTCTC	2 cut(s)	62, 1826
BstMBI	GATC	5 cut(s)	316, 325, 460, 958, 976
BstMWI	GCNNNNNNNGC	3 cut(s)	488, 884, 1376
BstNI	CCWGG	1 cut(s)	712
BstNSI	RCATGY	1 cut(s)	1374
BstSCI	CCNGG	1 cut(s)	710
BstSNI	TACGTA	1 cut(s)	1736
BstV1I	GCAGC	4 cut(s)	163, 475, 1314, 1496
BstV2I	GAAGAC	2 cut(s)	533, 1053
BstXI	CCANNNNNNTGG	1 cut(s)	1931
BsuRI	GGCC	3 cut(s)	548, 1319, 1531
BtgI	CCRYGG	3 cut(s)	309, 379, 1893
BtgZI	GCGATG	1 cut(s)	1379
BtsCI	GGATG	6 cut(s)	26, 319, 598, 1124, 1330, 1902
BtsIMutI	CAGTG	2 cut(s)	669, 732
Cac8I	GCNNGC	1 cut(s)	1697
CaiI	CAGNNNCTG	2 cut(s)	607, 734
CciI	TCATGA	1 cut(s)	1629
Cfr10I	RCCGGY	1 cut(s)	1319
Cfr13I	GGNCC	5 cut(s)	342, 397, 547, 1565, 1781
Csp6I	GTAC	3 cut(s)	217, 264, 1477
CviQI	GTAC	3 cut(s)	217, 264, 1477
DdeI	CTNAG	4 cut(s)	66, 500, 561, 699
DpnI	GATC	5 cut(s)	318, 327, 462, 960, 978
DpnII	GATC	5 cut(s)	316, 325, 460, 958, 976
DraI	TTTAAA	1 cut(s)	1105
DrdI	GACNNNNNNGTC	1 cut(s)	562
DseDI	GACNNNNNNGTC	1 cut(s)	562
Eam1104I	CTCTTC	3 cut(s)	135, 964, 1030
EarI	CTCTTC	3 cut(s)	135, 964, 1030
EciI	GGCGGA	1 cut(s)	902
Eco105I	TACGTA	1 cut(s)	1736
Eco130I	CCWWGG	5 cut(s)	309, 379, 633, 1334, 1893
Eco24I	GRGCYC	1 cut(s)	687
Eco47I	GGWCC	4 cut(s)	342, 397, 1565, 1781
Eco57I	CTGAAG	4 cut(s)	410, 645, 1428, 1832
Eco88I	CYCGRG	1 cut(s)	680
EcoO109I	RGGNCCY	2 cut(s)	342, 397
EcoRII	CCWGG	1 cut(s)	710
EcoT14I	CCWWGG	5 cut(s)	309, 379, 633, 1334, 1893
EcoT22I	ATGCAT	1 cut(s)	1285
EcoT38I	GRGCYC	1 cut(s)	687
ErhI	CCWWGG	5 cut(s)	309, 379, 633, 1334, 1893
Esp3I	CGTCTC	1 cut(s)	1826
FalI	AAGNNNNNCTT	2 cut(s)	498, 530
FaqI	GGGAC	4 cut(s)	355, 1278, 1551, 1609
FauI	CCCGC	2 cut(s)	64, 138
FblI	GTMKAC	1 cut(s)	1344
Fnu4HI	GCNGC	5 cut(s)	177, 489, 546, 1328, 1510
FokI	GGATG	6 cut(s)	33, 326, 605, 1131, 1317, 1889
FriOI	GRGCYC	1 cut(s)	687
Fsp4HI	GCNGC	5 cut(s)	177, 489, 546, 1328, 1510
FspBI	CTAG	3 cut(s)	1335, 1527, 1553
GluI	GCNGC	5 cut(s)	177, 489, 546, 1328, 1510
GsaI	CCCAGC	1 cut(s)	1927
HaeIII	GGCC	3 cut(s)	548, 1319, 1531
HapII	CCGG	1 cut(s)	1320
HincII	GTYRAC	1 cut(s)	1768
HindII	GTYRAC	1 cut(s)	1768
HindIII	AAGCTT	1 cut(s)	1814
HinfI	GANTC	6 cut(s)	271, 556, 674, 866, 1484, 1712
HpaII	CCGG	1 cut(s)	1320
HphI	GGTGA	4 cut(s)	470, 1145, 1513, 1571
Hpy166II	GTNNAC	3 cut(s)	870, 1345, 1768
Hpy188I	TCNGA	4 cut(s)	390, 641, 765, 1581
Hpy188III	TCNNGA	5 cut(s)	607, 623, 1630, 1649, 1757
Hpy8I	GTNNAC	3 cut(s)	870, 1345, 1768
HpyCH4III	ACNGT	4 cut(s)	216, 409, 736, 1520
HpyCH4IV	ACGT	6 cut(s)	232, 474, 1291, 1735, 1801, 1835
HpyCH4V	TGCA	7 cut(s)	6, 728, 1283, 1313, 1330, 1859, 1867
HpyF10VI	GCNNNNNNNGC	3 cut(s)	488, 884, 1376
HpyF3I	CTNAG	4 cut(s)	66, 500, 561, 699
HpySE526I	ACGT	6 cut(s)	232, 474, 1291, 1735, 1801, 1835
KflI	GGGWCCC	1 cut(s)	342
Kzo9I	GATC	5 cut(s)	316, 325, 460, 958, 976
LmnI	GCTCC	5 cut(s)	204, 381, 487, 496, 808
Lsp1109I	GCAGC	4 cut(s)	163, 475, 1314, 1496
LweI	GCATC	3 cut(s)	145, 429, 1339
MaeI	CTAG	3 cut(s)	1335, 1527, 1553
MaeII	ACGT	6 cut(s)	232, 474, 1291, 1735, 1801, 1835
MaeIII	GTNAC	7 cut(s)	628, 730, 790, 1010, 1109, 1501, 1802
MalI	GATC	5 cut(s)	318, 327, 462, 960, 978
MboI	GATC	5 cut(s)	316, 325, 460, 958, 976
MboII	GAAGA	7 cut(s)	152, 403, 538, 981, 1047, 1058, 1204
MhlI	GDGCHC	2 cut(s)	687, 1882
MluCI	AATT	9 cut(s)	27, 336, 723, 930, 1051, 1067, 1225, 1886, 1909
MlyI	GAGTC	2 cut(s)	550, 875
MmeI	TCCRAC	1 cut(s)	843
Mph1103I	ATGCAT	1 cut(s)	1285
MseI	TTAA	7 cut(s)	135, 402, 465, 933, 1104, 1353, 1437
MspCI	CTTAAG	2 cut(s)	401, 1436
MspI	CCGG	1 cut(s)	1320
MspR9I	CCNGG	1 cut(s)	712
MvaI	CCWGG	1 cut(s)	712
MwoI	GCNNNNNNNGC	3 cut(s)	488, 884, 1376
NcoI	CCATGG	3 cut(s)	309, 379, 1893
NdeII	GATC	5 cut(s)	316, 325, 460, 958, 976
NlaIV	GGNNCC	7 cut(s)	343, 344, 451, 810, 891, 1567, 1794
NmuCI	GTSAC	3 cut(s)	730, 1010, 1501
NsiI	ATGCAT	1 cut(s)	1285
NspI	RCATGY	1 cut(s)	1374
PagI	TCATGA	1 cut(s)	1629
PfeI	GAWTC	4 cut(s)	271, 674, 1484, 1712
PkrI	GCNGC	5 cut(s)	178, 490, 547, 1329, 1511
PleI	GAGTC	2 cut(s)	550, 874
PpsI	GAGTC	2 cut(s)	550, 874
Ppu21I	YACGTR	1 cut(s)	1736
PpuMI	RGGWCCY	2 cut(s)	342, 397
PsiI	TTATAA	1 cut(s)	1496
Psp5II	RGGWCCY	2 cut(s)	342, 397
Psp6I	CCWGG	1 cut(s)	710
PspFI	CCCAGC	1 cut(s)	1923
PspGI	CCWGG	1 cut(s)	710
PspN4I	GGNNCC	7 cut(s)	343, 344, 451, 810, 891, 1567, 1794
PspPI	GGNCC	5 cut(s)	342, 397, 547, 1565, 1781
PspPPI	RGGWCCY	2 cut(s)	342, 397
PsrI	GAACNNNNNNTAC	2 cut(s)	1407, 1439
PstNI	CAGNNNCTG	2 cut(s)	607, 734
RsaI	GTAC	3 cut(s)	218, 265, 1478
RsaNI	GTAC	3 cut(s)	217, 264, 1477
SaqAI	TTAA	7 cut(s)	135, 402, 465, 933, 1104, 1353, 1437
SatI	GCNGC	5 cut(s)	177, 489, 546, 1328, 1510
Sau3AI	GATC	5 cut(s)	316, 325, 460, 958, 976
Sau96I	GGNCC	5 cut(s)	342, 397, 547, 1565, 1781
SchI	GAGTC	2 cut(s)	550, 875
ScrFI	CCNGG	1 cut(s)	712
SduI	GDGCHC	2 cut(s)	687, 1882
SfaNI	GCATC	3 cut(s)	145, 429, 1339
SinI	GGWCC	4 cut(s)	342, 397, 1565, 1781
SmlI	CTYRAG	3 cut(s)	401, 813, 1436
SmoI	CTYRAG	3 cut(s)	401, 813, 1436
SnaBI	TACGTA	1 cut(s)	1736
SpeI	ACTAGT	1 cut(s)	1552
Sse9I	AATT	9 cut(s)	27, 336, 723, 930, 1051, 1067, 1225, 1886, 1909
SsiI	CCGC	6 cut(s)	57, 131, 545, 887, 1081, 1906
SspI	AATATT	3 cut(s)	99, 1001, 1258
SspMI	CTAG	3 cut(s)	1335, 1527, 1553
StyD4I	CCNGG	1 cut(s)	710
StyI	CCWWGG	5 cut(s)	309, 379, 633, 1334, 1893
TaaI	ACNGT	4 cut(s)	216, 409, 736, 1520
TaiI	ACGT	6 cut(s)	235, 477, 1294, 1738, 1804, 1838
TaqI	TCGA	2 cut(s)	1447, 1656
TasI	AATT	9 cut(s)	27, 336, 723, 930, 1051, 1067, 1225, 1886, 1909
TatI	WGTACW	2 cut(s)	216, 1476
TauI	GCSGC	1 cut(s)	548
TfiI	GAWTC	4 cut(s)	271, 674, 1484, 1712
Tru1I	TTAA	7 cut(s)	135, 402, 465, 933, 1104, 1353, 1437
Tru9I	TTAA	7 cut(s)	135, 402, 465, 933, 1104, 1353, 1437
TscAI	CASTG	2 cut(s)	676, 739
TseFI	GTSAC	3 cut(s)	730, 1010, 1501
TseI	GCWGC	4 cut(s)	176, 488, 1327, 1509
Tsp45I	GTSAC	3 cut(s)	730, 1010, 1501
TspRI	CASTG	2 cut(s)	676, 739
Vha464I	CTTAAG	2 cut(s)	401, 1436
VpaK11BI	GGWCC	4 cut(s)	342, 397, 1565, 1781
XapI	RAATTY	1 cut(s)	1067
XceI	RCATGY	1 cut(s)	1374
XmaJI	CCTAGG	1 cut(s)	1334
XmiI	GTMKAC	1 cut(s)	1344
XspI	CTAG	3 cut(s)	1335, 1527, 1553
Zsp2I	ATGCAT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.