Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0011058

Physical Location & Seq

Genomic Coordinates Reverse (-)

55383173 .. 55387928

Gene Structure 4756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034823

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGACGACGACTACGACGGCGGCGGCGTTCGGAGCTGCGACGACGGCGGTGCTCCGGGAGCCTAAGGTGGAGATTGGAAGGTACCAGGGGCTGAGGTCAGCAAACTCGCTCGCCCTCACCGCCAGTGGAAGACACGTGTGCACACTCTTCAACGCTTCGTCTCGGAGCTCCTCTCTCATTCGAGCCGTCTCTACGCCTGCAAAGCCTGAGACTGCAACAAAGCGTAGCAAGGTTGAAATATTCAAAGAACAGAGCAACTTCATTAGATACCCGCTTAATGAAGAGATTTTGACAGATGCCCCCAATATAAACGAAGCTGCTACCCAACTCATCAAGTTTCATGGGAGCTACCAACAGTACAACCGAGATGAACGTGGTGGAAGGTCTTACTCGTTTATGCTTCGTACCAAGAATCCTTGTGGGAAAGTGTCAAACCAACTATACTTGACCATGGATGATCTTGCCGATCAGTTTGGAATTGGGACTCTCCGTTTGACCACCAGACAAACATTTCAGCTCCACGGTGTTCTGAAGAAGGACCTTAAGACAGTACTGGGTAGTATCATTAGAAGCATGGGTTCAACTCTTGGTGCCTGTGGTGATCTTAATAGGAACGTCCTTGCTCCTGCTGCTCCACTACTAAGAAAAGATTACCTTTTCGCACAGAAGACAGCAGAGAACATTGCGGCCCTGCTGACTCCTCAGTCTGGTTTTTACTATGATGTATGGGTGGATGGAGAGCAGTTCCTGACAGCAGAACCTCCTGAAGTAACCAAGGCCAGAAACGATAATTCTAATGGAAAAACCTTCACTGATTCCCCTGAGCCCATCTATGGAACTCAGTTCTTGCCCAGGAAGTTCAAAATTGCAGTCACTGTGCCAACAGATAACTCGGTGGATATTCTCACAAATGATATTGGTGTTGTGGTTGTTACTGATGAAAATGGGGAGCCTCAAGGGTTCAACATATATGTTGGTGGTGGTATGGGAAGGACACATAGGTTGGAGACCACATTTGCTCGTCTGGCGGAACCATTGGGTTATGTTCCCAAAGAGGATATTCTAAAAGCAATTAAGTCTATTGTAGAAGTTCAACGAGATCATGGCAGAAGAGATGATCGTAAGTATAGTAGAATGAAATATTTGATCAGTAACTGGGGGATTGAAAAGTTTAGAAGAGAACTTGAAGACAATTATTACCAAAAGAAATTTGAGCCATTCCGCAAGTTGCCAGAGTGGGAGTTTAAAAGTTACTTGGGATGGCACGAGCAGGGTGATGGCAGTTTATTCTGTGGGCTTCATGTCGATAATGGGCGTATTGGGGGAAAGATGAAGAAGGCATTACGAGAAGTTATATCAAAGTATAATTTGAGTATAAGGCTCACACCCAACCAGAATATTATATTGTGTGATATTCGCAATGCATGGAAACGTCCCATCACAACAACTCTTGCACAGGCCGGTCTGCTGCATCCTAGGTATGTAGACCCCCTTAACCAAACTGCGATGGCATGTCCAGCCTTCCCTCTATGCCCATTGGCAATAACTGAAGCTGAACGGGGAATACCTGACATTCTTAAGCGAGTTCGAGCAGTATTTGAGAAGGTTGGTCTAAAGTACAATGAATCTGTTGTTATAAGGGTGACTGGCTGCCCCAATGGTTGTGCTAGGCCATATATGGCTGAACTTGGACTAGTGGGTGATGGTCCCAACAGCTATCAGATATGGCTTGGAGGAACACCCAATCAAACCTCAATAGCAAAAGCCTTCATGAACAAGGTCAAGGTTCAAAACCTGGAAAAAGTTTTTGAACCTTTATTTTATCATTGGAAACGCAAGCGACAAGCTAAAGAATCATTTGGCGACTTCACAATACGTATGGGATTTGAGAAACTTCAAGAGTTGGTTGACAAATGGGAAGGTCCAGAGGTGGCACCAACACGTTACAACCTGAAGCTTTTTGCTGATAAGGAGACGTATGAAGCAGTTGATGAACTTGCAAAGTTGCAGGGCAAGAGTGCTCATCAGTTAGCCATGGAAGTCATCCGCAATTTTGTTGCTTCCCAGCAAAATGGGAAAAGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006275 GO:0006323 GO:0006355 GO:0006790 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009295 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010319 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016002 GO:0016020 GO:0016043 GO:0016491 GO:0016667 GO:0016673 GO:0019219 GO:0019222 GO:0019418 GO:0019419 GO:0019424 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031975 GO:0036385 GO:0042644 GO:0042646 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048046 GO:0048519 GO:0048523 GO:0050311 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055114 GO:0060255 GO:0065007 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:1900160 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

696

Amino Acids

78.13

Weight (kDa)

9.29

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	131 - 185	3.8e-14	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	228 - 402	1.4e-43	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	422 - 475	1.5e-11	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	501 - 638	3.6e-10	Nitrite and sulphite reductase 4Fe-4S domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0011058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04590
fragaria_vesca	FvH4_3g28720 FvH4_3g28720 FvH4_3g28720 FvH4_3g28720
malus_domestica	MD03G1173800.v1.1 MD11G1192000.v1.1
prunus_persica	Prupe.4G250500_v2.0.a1
pyrus_communis	pycom03g13140 pycom11g16770
rosa_chinensis	RchiOBHm_Chr5g0052341
rosa_laevigata	RLG00000034823
rosa_multiflora	Rmu_sc0000968.1_g000009
rosa_roxburghii	Rroxscaffold_1G00028250
rosa_rugosa	Rorug05G0272600
rosa_samantha	Rh5AG345200 Rh5BG356300 Rh5CG381600 Rh5DG371400
rosa_wichuraiana	Rw5G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1637
AasI	GACNNNNNNGTC	1 cut(s)	703
Acc65I	GGTACC	1 cut(s)	81
AccB1I	GGYRCC	3 cut(s)	81, 590, 1933
AccI	GTMKAC	1 cut(s)	1485
AciI	CCGC	9 cut(s)	20, 23, 47, 120, 272, 686, 1028, 1222, 2047
AcsI	RAATTY	1 cut(s)	1208
AcuI	CTGAAG	4 cut(s)	551, 786, 1569, 1973
AcvI	CACGTG	1 cut(s)	136
AfaI	GTAC	5 cut(s)	83, 359, 406, 552, 1619
AfiI	CCNNNNNNNGG	2 cut(s)	707, 833
AflII	CTTAAG	2 cut(s)	542, 1577
AflIII	ACRYGT	3 cut(s)	133, 135, 1940
AhlI	ACTAGT	1 cut(s)	1693
AjnI	CCWGG	3 cut(s)	84, 851, 1794
AluBI	AGCT	9 cut(s)	35, 168, 317, 348, 517, 1553, 1716, 1847, 1957
AluI	AGCT	9 cut(s)	35, 168, 317, 348, 517, 1553, 1716, 1847, 1957
Alw21I	GWGCWC	4 cut(s)	54, 143, 170, 2023
Alw26I	GTCTC	5 cut(s)	165, 193, 203, 1001, 1967
Alw44I	GTGCAC	1 cut(s)	139
AlwNI	CAGNNNCTG	4 cut(s)	91, 748, 875, 1155
AoxI	GGCC	4 cut(s)	687, 777, 1458, 1670
ApaLI	GTGCAC	1 cut(s)	139
ApeKI	GCWGC	5 cut(s)	35, 317, 629, 1468, 1650
ApoI	RAATTY	1 cut(s)	1208
ArsI	GACNNNNNNTTYG	4 cut(s)	475, 507, 855, 887
Asp718I	GGTACC	1 cut(s)	81
AspA2I	CCTAGG	1 cut(s)	1475
AspS9I	GGNCC	4 cut(s)	538, 688, 1706, 1922
AsuC2I	CCSGG	1 cut(s)	56
AsuHPI	GGTGA	5 cut(s)	109, 611, 1286, 1654, 1712
AvaII	GGWCC	3 cut(s)	538, 1706, 1922
AvrII	CCTAGG	1 cut(s)	1475
AxyI	CCTNAGG	1 cut(s)	63
BaeGI	GKGCMC	1 cut(s)	143
BanI	GGYRCC	3 cut(s)	81, 590, 1933
BanII	GRGCYC	2 cut(s)	170, 828
BauI	CACGAG	1 cut(s)	1265
BbrPI	CACGTG	1 cut(s)	136
BbsI	GAAGAC	3 cut(s)	136, 674, 1194
Bbv12I	GWGCWC	4 cut(s)	54, 143, 170, 2023
BbvCI	CCTCAGC	1 cut(s)	92
BbvI	GCAGC	5 cut(s)	22, 304, 616, 1455, 1637
BccI	CCATC	7 cut(s)	728, 836, 1254, 1271, 1445, 1501, 1697
BceAI	ACGGC	3 cut(s)	33, 60, 170
BcgI	CGANNNNNNTGC	2 cut(s)	31, 65
BciT130I	CCWGG	3 cut(s)	86, 853, 1796
BclI	TGATCA	1 cut(s)	1146
BcnI	CCSGG	1 cut(s)	56
BcoDI	GTCTC	5 cut(s)	165, 193, 203, 1001, 1967
BcuI	ACTAGT	1 cut(s)	1693
BfaI	CTAG	3 cut(s)	1476, 1668, 1694
BfrI	CTTAAG	2 cut(s)	542, 1577
BisI	GCNGC	8 cut(s)	21, 24, 36, 318, 630, 687, 1469, 1651
BlnI	CCTAGG	1 cut(s)	1475
BlsI	GCNGC	8 cut(s)	22, 25, 37, 319, 631, 688, 1470, 1652
BmcAI	AGTACT	1 cut(s)	552
Bme1390I	CCNGG	4 cut(s)	56, 86, 853, 1796
Bme18I	GGWCC	3 cut(s)	538, 1706, 1922
BmgT120I	GGNCC	4 cut(s)	538, 688, 1706, 1922
BmiI	GGNNCC	7 cut(s)	60, 83, 592, 951, 1032, 1708, 1935
BmrFI	CCNGG	4 cut(s)	56, 86, 853, 1796
BmrI	ACTGGG	2 cut(s)	563, 1165
BmsI	GCATC	2 cut(s)	286, 1480
BmuI	ACTGGG	2 cut(s)	563, 1165
BpiI	GAAGAC	3 cut(s)	136, 674, 1194
BplI	GAGNNNNNCTC	2 cut(s)	157, 189
Bpu10I	CCTNAGC	2 cut(s)	92, 822
BpuEI	CTTGAG	1 cut(s)	939
BpuMI	CCSGG	1 cut(s)	56
BsaAI	YACGTR	2 cut(s)	136, 1877
BsaI	GGTCTC	1 cut(s)	1001
BsaJI	CCNNGG	7 cut(s)	85, 450, 520, 774, 851, 1475, 2034
Bsc4I	CCNNNNNNNGG	2 cut(s)	707, 833
Bse118I	RCCGGY	1 cut(s)	1460
Bse1I	ACTGG	4 cut(s)	123, 558, 1160, 1651
Bse21I	CCTNAGG	1 cut(s)	63
Bse3DI	GCAATG	2 cut(s)	681, 1426
BseBI	CCWGG	3 cut(s)	86, 853, 1796
BseDI	CCNNGG	7 cut(s)	85, 450, 520, 774, 851, 1475, 2034
BseGI	GGATG	5 cut(s)	460, 739, 1265, 1471, 2043
BseLI	CCNNNNNNNGG	2 cut(s)	707, 833
BseMI	GCAATG	2 cut(s)	681, 1426
BseMII	CTCAG	5 cut(s)	83, 198, 716, 813, 854
BseNI	ACTGG	4 cut(s)	123, 558, 1160, 1651
BseRI	GAGGAG	2 cut(s)	160, 690
BseSI	GKGCMC	1 cut(s)	143
BseXI	GCAGC	5 cut(s)	22, 304, 616, 1455, 1637
BseYI	CCCAGC	1 cut(s)	2064
BshFI	GGCC	4 cut(s)	689, 779, 1460, 1672
BshNI	GGYRCC	3 cut(s)	81, 590, 1933
BsiHKAI	GWGCWC	4 cut(s)	54, 143, 170, 2023
BsiSI	CCGG	2 cut(s)	55, 1461
BslFI	GGGAC	3 cut(s)	496, 1419, 1692
BslI	CCNNNNNNNGG	2 cut(s)	707, 833
BsmAI	GTCTC	5 cut(s)	165, 193, 203, 1001, 1967
BsmBI	CGTCTC	3 cut(s)	165, 193, 1967
BsmFI	GGGAC	3 cut(s)	496, 1419, 1692
BsnI	GGCC	4 cut(s)	689, 779, 1460, 1672
Bso31I	GGTCTC	1 cut(s)	1001
Bsp1286I	GDGCHC	5 cut(s)	54, 143, 170, 828, 2023
Bsp143I	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
Bsp19I	CCATGG	2 cut(s)	450, 2034
BspACI	CCGC	9 cut(s)	20, 23, 47, 120, 272, 686, 1028, 1222, 2047
BspANI	GGCC	4 cut(s)	689, 779, 1460, 1672
BspCNI	CTCAG	5 cut(s)	84, 199, 715, 814, 853
BspHI	TCATGA	1 cut(s)	1770
BspLI	GGNNCC	7 cut(s)	60, 83, 592, 951, 1032, 1708, 1935
BspT107I	GGYRCC	3 cut(s)	81, 590, 1933
BspTI	CTTAAG	2 cut(s)	542, 1577
BspTNI	GGTCTC	1 cut(s)	1001
BsrDI	GCAATG	2 cut(s)	681, 1426
BsrFI	RCCGGY	1 cut(s)	1460
BsrI	ACTGG	4 cut(s)	123, 558, 1160, 1651
BssAI	RCCGGY	1 cut(s)	1460
BssECI	CCNNGG	7 cut(s)	85, 450, 520, 774, 851, 1475, 2034
BssMI	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
BssSI	CACGAG	1 cut(s)	1265
BssT1I	CCWWGG	4 cut(s)	450, 774, 1475, 2034
Bst2BI	CACGAG	1 cut(s)	1265
Bst2UI	CCWGG	3 cut(s)	86, 853, 1796
Bst4CI	ACNGT	4 cut(s)	357, 524, 550, 877
Bst6I	CTCTTC	4 cut(s)	152, 276, 1105, 1171
BstAFI	CTTAAG	2 cut(s)	542, 1577
BstBAI	YACGTR	2 cut(s)	136, 1877
BstC8I	GCNNGC	3 cut(s)	111, 198, 1838
BstDEI	CTNAG	7 cut(s)	63, 92, 207, 641, 702, 822, 840
BstDSI	CCRYGG	3 cut(s)	450, 520, 2034
BstF5I	GGATG	5 cut(s)	460, 739, 1265, 1471, 2043
BstKTI	GATC	6 cut(s)	460, 469, 604, 1102, 1120, 1149
BstMAI	GTCTC	5 cut(s)	165, 193, 203, 1001, 1967
BstMBI	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 44, 58, 119, 202, 629, 1025, 1517
BstNI	CCWGG	3 cut(s)	86, 853, 1796
BstNSI	RCATGY	1 cut(s)	1515
BstSCI	CCNGG	4 cut(s)	54, 84, 851, 1794
BstSLI	GKGCMC	1 cut(s)	143
BstSNI	TACGTA	1 cut(s)	1877
BstV1I	GCAGC	5 cut(s)	22, 304, 616, 1455, 1637
BstV2I	GAAGAC	3 cut(s)	136, 674, 1194
BstXI	CCANNNNNNTGG	1 cut(s)	2072
Bsu36I	CCTNAGG	1 cut(s)	63
BsuRI	GGCC	4 cut(s)	689, 779, 1460, 1672
BtgI	CCRYGG	3 cut(s)	450, 520, 2034
BtgZI	GCGATG	1 cut(s)	1520
BtsCI	GGATG	5 cut(s)	460, 739, 1265, 1471, 2043
BtsIMutI	CAGTG	3 cut(s)	130, 810, 873
Cac8I	GCNNGC	3 cut(s)	111, 198, 1838
CaiI	CAGNNNCTG	4 cut(s)	91, 748, 875, 1155
CciI	TCATGA	1 cut(s)	1770
Cfr10I	RCCGGY	1 cut(s)	1460
Cfr13I	GGNCC	4 cut(s)	538, 688, 1706, 1922
Csp6I	GTAC	5 cut(s)	82, 358, 405, 551, 1618
CviAII	CATG	9 cut(s)	341, 451, 574, 1103, 1301, 1425, 1512, 1771, 2035
CviQI	GTAC	5 cut(s)	82, 358, 405, 551, 1618
DdeI	CTNAG	7 cut(s)	63, 92, 207, 641, 702, 822, 840
DpnI	GATC	6 cut(s)	459, 468, 603, 1101, 1119, 1148
DpnII	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
DraI	TTTAAA	1 cut(s)	1246
DrdI	GACNNNNNNGTC	1 cut(s)	703
DseDI	GACNNNNNNGTC	1 cut(s)	703
Eam1104I	CTCTTC	4 cut(s)	152, 276, 1105, 1171
EarI	CTCTTC	4 cut(s)	152, 276, 1105, 1171
EciI	GGCGGA	1 cut(s)	1043
Ecl136II	GAGCTC	1 cut(s)	168
Eco105I	TACGTA	1 cut(s)	1877
Eco130I	CCWWGG	4 cut(s)	450, 774, 1475, 2034
Eco24I	GRGCYC	2 cut(s)	170, 828
Eco31I	GGTCTC	1 cut(s)	1001
Eco47I	GGWCC	3 cut(s)	538, 1706, 1922
Eco53kI	GAGCTC	1 cut(s)	168
Eco57I	CTGAAG	4 cut(s)	551, 786, 1569, 1973
Eco72I	CACGTG	1 cut(s)	136
Eco81I	CCTNAGG	1 cut(s)	63
EcoICRI	GAGCTC	1 cut(s)	168
EcoO109I	RGGNCCY	1 cut(s)	538
EcoRII	CCWGG	3 cut(s)	84, 851, 1794
EcoT14I	CCWWGG	4 cut(s)	450, 774, 1475, 2034
EcoT22I	ATGCAT	1 cut(s)	1426
EcoT38I	GRGCYC	2 cut(s)	170, 828
ErhI	CCWWGG	4 cut(s)	450, 774, 1475, 2034
Esp3I	CGTCTC	3 cut(s)	165, 193, 1967
FaeI	CATG	9 cut(s)	344, 454, 577, 1106, 1304, 1428, 1515, 1774, 2038
FalI	AAGNNNNNCTT	2 cut(s)	639, 671
FaqI	GGGAC	3 cut(s)	496, 1419, 1692
FatI	CATG	9 cut(s)	340, 450, 573, 1102, 1300, 1424, 1511, 1770, 2034
FauI	CCCGC	1 cut(s)	279
FbaI	TGATCA	1 cut(s)	1146
FblI	GTMKAC	1 cut(s)	1485
Fnu4HI	GCNGC	8 cut(s)	21, 24, 36, 318, 630, 687, 1469, 1651
FokI	GGATG	5 cut(s)	467, 746, 1272, 1458, 2030
FriOI	GRGCYC	2 cut(s)	170, 828
Fsp4HI	GCNGC	8 cut(s)	21, 24, 36, 318, 630, 687, 1469, 1651
FspBI	CTAG	3 cut(s)	1476, 1668, 1694
GluI	GCNGC	8 cut(s)	21, 24, 36, 318, 630, 687, 1469, 1651
GsaI	CCCAGC	1 cut(s)	2068
HaeIII	GGCC	4 cut(s)	689, 779, 1460, 1672
HapII	CCGG	2 cut(s)	55, 1461
Hin1II	CATG	9 cut(s)	344, 454, 577, 1106, 1304, 1428, 1515, 1774, 2038
HincII	GTYRAC	1 cut(s)	1909
HindII	GTYRAC	1 cut(s)	1909
HindIII	AAGCTT	1 cut(s)	1955
HinfI	GANTC	6 cut(s)	412, 484, 697, 815, 1625, 1853
HpaII	CCGG	2 cut(s)	55, 1461
HphI	GGTGA	5 cut(s)	109, 611, 1286, 1654, 1712
Hpy166II	GTNNAC	3 cut(s)	141, 1486, 1909
Hpy188I	TCNGA	4 cut(s)	32, 165, 531, 1722
Hpy188III	TCNNGA	5 cut(s)	748, 764, 1771, 1898, 1925
Hpy8I	GTNNAC	3 cut(s)	141, 1486, 1909
Hpy99I	CGWCG	4 cut(s)	10, 19, 43, 46
HpyCH4III	ACNGT	4 cut(s)	357, 524, 550, 877
HpyCH4IV	ACGT	7 cut(s)	135, 373, 615, 1432, 1876, 1942, 1976
HpyCH4V	TGCA	9 cut(s)	141, 200, 215, 869, 1424, 1454, 1471, 2000, 2008
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 44, 58, 119, 202, 629, 1025, 1517
HpyF3I	CTNAG	7 cut(s)	63, 92, 207, 641, 702, 822, 840
HpySE526I	ACGT	7 cut(s)	135, 373, 615, 1432, 1876, 1942, 1976
Hsp92II	CATG	9 cut(s)	344, 454, 577, 1106, 1304, 1428, 1515, 1774, 2038
KpnI	GGTACC	1 cut(s)	85
Ksp22I	TGATCA	1 cut(s)	1146
Kzo9I	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
Lsp1109I	GCAGC	5 cut(s)	22, 304, 616, 1455, 1637
LweI	GCATC	2 cut(s)	286, 1480
MaeI	CTAG	3 cut(s)	1476, 1668, 1694
MaeII	ACGT	7 cut(s)	135, 373, 615, 1432, 1876, 1942, 1976
MaeIII	GTNAC	7 cut(s)	769, 871, 931, 1151, 1250, 1642, 1943
MalI	GATC	6 cut(s)	459, 468, 603, 1101, 1119, 1148
MboI	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
MboII	GAAGA	9 cut(s)	139, 141, 293, 544, 679, 1122, 1188, 1199, 1345
MhlI	GDGCHC	5 cut(s)	54, 143, 170, 828, 2023
MluCI	AATT	8 cut(s)	477, 790, 864, 1071, 1192, 1208, 1366, 2050
MlyI	GAGTC	2 cut(s)	478, 691
MmeI	TCCRAC	1 cut(s)	984
Mph1103I	ATGCAT	1 cut(s)	1426
MseI	TTAA	7 cut(s)	276, 543, 606, 1074, 1245, 1494, 1578
MspCI	CTTAAG	2 cut(s)	542, 1577
MspI	CCGG	2 cut(s)	55, 1461
MspR9I	CCNGG	4 cut(s)	56, 86, 853, 1796
MvaI	CCWGG	3 cut(s)	86, 853, 1796
MwoI	GCNNNNNNNGC	8 cut(s)	32, 44, 58, 119, 202, 629, 1025, 1517
NciI	CCSGG	1 cut(s)	56
NcoI	CCATGG	2 cut(s)	450, 2034
NdeII	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
NlaIII	CATG	9 cut(s)	344, 454, 577, 1106, 1304, 1428, 1515, 1774, 2038
NlaIV	GGNNCC	7 cut(s)	60, 83, 592, 951, 1032, 1708, 1935
NmuCI	GTSAC	2 cut(s)	871, 1642
NsiI	ATGCAT	1 cut(s)	1426
NspI	RCATGY	1 cut(s)	1515
PagI	TCATGA	1 cut(s)	1770
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 23
PfeI	GAWTC	4 cut(s)	412, 815, 1625, 1853
PfoI	TCCNGGA	1 cut(s)	54
PkrI	GCNGC	8 cut(s)	22, 25, 37, 319, 631, 688, 1470, 1652
PleI	GAGTC	2 cut(s)	478, 691
PmaCI	CACGTG	1 cut(s)	136
PmlI	CACGTG	1 cut(s)	136
PpsI	GAGTC	2 cut(s)	478, 691
Ppu21I	YACGTR	2 cut(s)	136, 1877
PpuMI	RGGWCCY	1 cut(s)	538
PsiI	TTATAA	1 cut(s)	1637
Psp124BI	GAGCTC	1 cut(s)	170
Psp5II	RGGWCCY	1 cut(s)	538
Psp6I	CCWGG	3 cut(s)	84, 851, 1794
PspCI	CACGTG	1 cut(s)	136
PspFI	CCCAGC	1 cut(s)	2064
PspGI	CCWGG	3 cut(s)	84, 851, 1794
PspN4I	GGNNCC	7 cut(s)	60, 83, 592, 951, 1032, 1708, 1935
PspPI	GGNCC	4 cut(s)	538, 688, 1706, 1922
PspPPI	RGGWCCY	1 cut(s)	538
PsrI	GAACNNNNNNTAC	2 cut(s)	1548, 1580
PstNI	CAGNNNCTG	4 cut(s)	91, 748, 875, 1155
RsaI	GTAC	5 cut(s)	83, 359, 406, 552, 1619
RsaNI	GTAC	5 cut(s)	82, 358, 405, 551, 1618
SacI	GAGCTC	1 cut(s)	170
SaqAI	TTAA	7 cut(s)	276, 543, 606, 1074, 1245, 1494, 1578
SatI	GCNGC	8 cut(s)	21, 24, 36, 318, 630, 687, 1469, 1651
Sau3AI	GATC	6 cut(s)	457, 466, 601, 1099, 1117, 1146
Sau96I	GGNCC	4 cut(s)	538, 688, 1706, 1922
ScaI	AGTACT	1 cut(s)	552
SchI	GAGTC	2 cut(s)	478, 691
ScrFI	CCNGG	4 cut(s)	56, 86, 853, 1796
SduI	GDGCHC	5 cut(s)	54, 143, 170, 828, 2023
SfaNI	GCATC	2 cut(s)	286, 1480
SinI	GGWCC	3 cut(s)	538, 1706, 1922
SmlI	CTYRAG	3 cut(s)	542, 954, 1577
SmoI	CTYRAG	3 cut(s)	542, 954, 1577
SnaBI	TACGTA	1 cut(s)	1877
SpeI	ACTAGT	1 cut(s)	1693
Sse9I	AATT	8 cut(s)	477, 790, 864, 1071, 1192, 1208, 1366, 2050
SsiI	CCGC	9 cut(s)	20, 23, 47, 120, 272, 686, 1028, 1222, 2047
SspI	AATATT	3 cut(s)	240, 1142, 1399
SspMI	CTAG	3 cut(s)	1476, 1668, 1694
SstI	GAGCTC	1 cut(s)	170
StyD4I	CCNGG	4 cut(s)	54, 84, 851, 1794
StyI	CCWWGG	4 cut(s)	450, 774, 1475, 2034
TaaI	ACNGT	4 cut(s)	357, 524, 550, 877
TaiI	ACGT	7 cut(s)	138, 376, 618, 1435, 1879, 1945, 1979
TaqI	TCGA	3 cut(s)	181, 1305, 1588
TasI	AATT	8 cut(s)	477, 790, 864, 1071, 1192, 1208, 1366, 2050
TatI	WGTACW	3 cut(s)	357, 550, 1617
TauI	GCSGC	3 cut(s)	23, 26, 689
TfiI	GAWTC	4 cut(s)	412, 815, 1625, 1853
Tru1I	TTAA	7 cut(s)	276, 543, 606, 1074, 1245, 1494, 1578
Tru9I	TTAA	7 cut(s)	276, 543, 606, 1074, 1245, 1494, 1578
TscAI	CASTG	3 cut(s)	130, 817, 880
TseFI	GTSAC	2 cut(s)	871, 1642
TseI	GCWGC	5 cut(s)	35, 317, 629, 1468, 1650
Tsp45I	GTSAC	2 cut(s)	871, 1642
TspGWI	ACGGA	1 cut(s)	479
TspRI	CASTG	3 cut(s)	130, 817, 880
Vha464I	CTTAAG	2 cut(s)	542, 1577
VneI	GTGCAC	1 cut(s)	139
VpaK11BI	GGWCC	3 cut(s)	538, 1706, 1922
XapI	RAATTY	1 cut(s)	1208
XceI	RCATGY	1 cut(s)	1515
XmaJI	CCTAGG	1 cut(s)	1475
XmiI	GTMKAC	1 cut(s)	1485
XspI	CTAG	3 cut(s)	1476, 1668, 1694
ZrmI	AGTACT	1 cut(s)	552
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.