Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007585

Physical Location & Seq

Genomic Coordinates Forward (+)

1496709 .. 1498544

Gene Structure 1836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G05070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGCAGAGGGAGAGAATGAGCAAGAAGAAGATTAGTCAAGTTCATTGCATTCCCTCTGGTGATCATATTCTCATGACGGCTTCTTCTTCCAAACACATTCCTCATATCAGATTCTACAAAGCCTGGAAGGGTAACAACAGATTTTGCTGTGGTGGTAGACTAATCTTTGGTCCTGATGTATCATCTCTGTACCTAACCTCCTTCTTGATTGGAGCTCCTGCGCTTACATTCTGCATAAGGATGCTCGTGTGGATCAAAAGAGGAGATCCTTTCTTCAACTATACCGTTCTAGCTTCAGGATTTATCCTCACCCTCTTGGATTTTACGTTTCTAATGTTGACATCAGCTAGGGATCCAGGAATCATCCCAAGGAACAAAACATCAATGATTCTTGAAGATGATTCAGATAGTTCCTTGACACAATCTATGGAATGGGTCAACAACAAAACTCCTAATCTCAAGATTCCTAGAACCAAAGACGTTTTCGTCAATGGTTACACTATCAAAGTCAAGTTCTGCGATACTTGCTTGCTCTATCGTCCACCTCGAGCATCACATTGCTCCATCTGCAACAACTGTGTCCAACGCTTTGATCACCATTGTCCATGGGTTGGTCAGTGCATTGCCCGAAGAAACTACCCGTTCTTCATTTGCTTCATCTCATCTTCAACATTGCTATGCATATATGTTTTTGTGTTCTCCTGGATCAACCTGATTAGACAACCTGGGAAGCTATGGAGGACAATGTCTGATGATATAGTGTCTGTCATTCTTATTGTATATACATTTGTCGCTGTCTGGTTCGTTGGTGGCCTTACCATTTTCCACTTCTATCTCATGTCTACAAACCAGACAACATATGAGAATTTCCGGTACCGTTATGATAAGAAAGAAAATCCTTACAAGAGAGGGTTACTGAAGAATGTTAAAGAAGTACTATTTGCCAAGATCCCGCCTTCGCAACTAGATCTCAGAGCAATGGTCCCGGAAGAAGATGACATGACTATAGCATCTAACGATTCCGAGTATGAGTCAGAGTATACCTCCTCCGTGAGATACGATACAGAGATGGGAGGCAAGCTCATTAAAAGGGATAGCCCTAGGAAGCTTCCTTTGCCAACACGAAACTTAGATGATATCAAGGACATTAGTGATAACTACGACAGATCTACGACAACTAGAGAGGATGCTTCTGACCGCGATCCTTCGTTTTTCTCATCTCAACTAGACTTGCCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030154 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035618 GO:0040007 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0060560 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0099402 GO:0120025 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04391 map04391

Pfam Domains

Protein Families

DHHC

Protein Analysis

413

Amino Acids

47.78

Weight (kDa)

8.98

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHHC	PF01529	170 - 291	4.1e-37	DHHC palmitoyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40990 AT3G56920 AT5G05070
fragaria_vesca	FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200
malus_domestica	MD00G1068100.v1.1 MD00G1118200.v1.1
prunus_persica	Prupe.7G020700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0494561
rosa_laevigata	RLG00000022669
rosa_multiflora	Rmu_sc0001610.1_g000001
rosa_rugosa	Rorug03G0265800 Rorug03G0265900
rosa_samantha	Rh3AG315900 Rh3BG351400 Rh3CG348000 Rh3DG350600
rosa_wichuraiana	Rw3G027580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	485
Acc65I	GGTACC	1 cut(s)	873
AccB1I	GGYRCC	1 cut(s)	873
AccB7I	CCANNNNNTGG	1 cut(s)	611
AccI	GTMKAC	3 cut(s)	157, 842, 1040
AccII	CGCG	1 cut(s)	1200
AciI	CCGC	2 cut(s)	953, 1198
AclWI	GGATC	7 cut(s)	260, 260, 347, 360, 713, 943, 1196
AcsI	RAATTY	1 cut(s)	865
AcuI	CTGAAG	2 cut(s)	279, 938
AfaI	GTAC	3 cut(s)	191, 875, 936
AfiI	CCNNNNNNNGG	1 cut(s)	611
AgsI	TTSAA	3 cut(s)	277, 395, 669
AjnI	CCWGG	4 cut(s)	122, 355, 701, 724
AjuI	GAANNNNNNNTTGG	2 cut(s)	467, 499
AluBI	AGCT	6 cut(s)	215, 293, 347, 733, 1081, 1108
AluI	AGCT	6 cut(s)	215, 293, 347, 733, 1081, 1108
Alw21I	GWGCWC	1 cut(s)	217
AlwI	GGATC	7 cut(s)	260, 260, 347, 360, 713, 943, 1196
Ama87I	CYCGRG	1 cut(s)	546
AoxI	GGCC	1 cut(s)	811
ApoI	RAATTY	1 cut(s)	865
Asp718I	GGTACC	1 cut(s)	873
AspA2I	CCTAGG	1 cut(s)	1100
AspLEI	GCGC	1 cut(s)	223
AspS9I	GGNCC	2 cut(s)	170, 982
AsuC2I	CCSGG	1 cut(s)	986
AsuHPI	GGTGA	3 cut(s)	71, 301, 587
AvaI	CYCGRG	1 cut(s)	546
AvaII	GGWCC	2 cut(s)	170, 982
AvrII	CCTAGG	1 cut(s)	1100
BamHI	GGATCC	1 cut(s)	352
BanI	GGYRCC	1 cut(s)	873
BanII	GRGCYC	1 cut(s)	217
BauI	CACGAG	1 cut(s)	245
Bbv12I	GWGCWC	1 cut(s)	217
BccI	CCATC	2 cut(s)	572, 1063
BceAI	ACGGC	1 cut(s)	93
BciT130I	CCWGG	4 cut(s)	124, 357, 703, 726
BclI	TGATCA	2 cut(s)	61, 592
BcnI	CCSGG	1 cut(s)	986
BfaI	CTAG	7 cut(s)	290, 348, 468, 965, 1101, 1179, 1226
BfmI	CTRYAG	1 cut(s)	1005
BglII	AGATCT	2 cut(s)	967, 1166
BlnI	CCTAGG	1 cut(s)	1100
BmcAI	AGTACT	1 cut(s)	936
Bme1390I	CCNGG	5 cut(s)	124, 357, 703, 726, 986
Bme18I	GGWCC	2 cut(s)	170, 982
BmeT110I	CYCGRG	1 cut(s)	546
BmgT120I	GGNCC	2 cut(s)	170, 982
BmiI	GGNNCC	3 cut(s)	354, 875, 984
BmrFI	CCNGG	5 cut(s)	124, 357, 703, 726, 986
BmsI	GCATC	4 cut(s)	231, 560, 1019, 1177
BplI	GAGNNNNNCTC	4 cut(s)	1028, 1060, 1065, 1097
BpuEI	CTTGAG	1 cut(s)	443
BpuMI	CCSGG	1 cut(s)	986
BsaJI	CCNNGG	4 cut(s)	368, 605, 725, 1100
BsaWI	WCCGGW	1 cut(s)	870
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	1 cut(s)	611
Bse3DI	GCAATG	5 cut(s)	43, 556, 621, 671, 984
BseBI	CCWGG	4 cut(s)	124, 357, 703, 726
BseDI	CCNNGG	4 cut(s)	368, 605, 725, 1100
BseGI	GGATG	3 cut(s)	246, 363, 1192
BseLI	CCNNNNNNNGG	1 cut(s)	611
BseMI	GCAATG	5 cut(s)	43, 556, 621, 671, 984
BseMII	CTCAG	1 cut(s)	985
BseRI	GAGGAG	2 cut(s)	276, 1036
Bsh1236I	CGCG	1 cut(s)	1200
BshFI	GGCC	1 cut(s)	813
BshNI	GGYRCC	1 cut(s)	873
BsiHKAI	GWGCWC	1 cut(s)	217
BsiHKCI	CYCGRG	1 cut(s)	546
BsiSI	CCGG	2 cut(s)	871, 986
BslFI	GGGAC	1 cut(s)	968
BslI	CCNNNNNNNGG	1 cut(s)	611
BsmFI	GGGAC	1 cut(s)	968
BsmI	GAATGC	1 cut(s)	48
BsnI	GGCC	1 cut(s)	813
BsoBI	CYCGRG	1 cut(s)	546
Bsp1286I	GDGCHC	1 cut(s)	217
Bsp19I	CCATGG	1 cut(s)	605
BspACI	CCGC	2 cut(s)	953, 1198
BspANI	GGCC	1 cut(s)	813
BspCNI	CTCAG	1 cut(s)	984
BspFNI	CGCG	1 cut(s)	1200
BspHI	TCATGA	1 cut(s)	72
BspLI	GGNNCC	3 cut(s)	354, 875, 984
BspPI	GGATC	7 cut(s)	260, 260, 347, 360, 713, 943, 1196
BspT107I	GGYRCC	1 cut(s)	873
BsrDI	GCAATG	5 cut(s)	43, 556, 621, 671, 984
BssECI	CCNNGG	4 cut(s)	368, 605, 725, 1100
BssNAI	GTATAC	1 cut(s)	1041
BssSI	CACGAG	1 cut(s)	245
BssT1I	CCWWGG	3 cut(s)	368, 605, 1100
Bst1107I	GTATAC	1 cut(s)	1041
Bst2BI	CACGAG	1 cut(s)	245
Bst2UI	CCWGG	4 cut(s)	124, 357, 703, 726
Bst4CI	ACNGT	3 cut(s)	286, 578, 878
BstC8I	GCNNGC	2 cut(s)	530, 1079
BstDEI	CTNAG	2 cut(s)	971, 1129
BstDSI	CCRYGG	1 cut(s)	605
BstF5I	GGATG	3 cut(s)	246, 363, 1192
BstFNI	CGCG	1 cut(s)	1200
BstHHI	GCGC	1 cut(s)	223
BstMWI	GCNNNNNNNGC	3 cut(s)	525, 567, 1114
BstNI	CCWGG	4 cut(s)	124, 357, 703, 726
BstSCI	CCNGG	5 cut(s)	122, 355, 701, 724, 984
BstSFI	CTRYAG	1 cut(s)	1005
BstUI	CGCG	1 cut(s)	1200
BstX2I	RGATCY	5 cut(s)	265, 352, 948, 967, 1166
BstYI	RGATCY	5 cut(s)	265, 352, 948, 967, 1166
BstZ17I	GTATAC	1 cut(s)	1041
BsuRI	GGCC	1 cut(s)	813
BtgI	CCRYGG	1 cut(s)	605
BtsCI	GGATG	3 cut(s)	246, 363, 1192
BtsIMutI	CAGTG	1 cut(s)	623
Cac8I	GCNNGC	2 cut(s)	530, 1079
CciI	TCATGA	1 cut(s)	72
CfoI	GCGC	1 cut(s)	223
Cfr13I	GGNCC	2 cut(s)	170, 982
Csp6I	GTAC	3 cut(s)	190, 874, 935
CviAII	CATG	4 cut(s)	73, 606, 838, 1000
CviQI	GTAC	3 cut(s)	190, 874, 935
DdeI	CTNAG	2 cut(s)	971, 1129
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
Ecl136II	GAGCTC	1 cut(s)	215
Eco130I	CCWWGG	3 cut(s)	368, 605, 1100
Eco24I	GRGCYC	1 cut(s)	217
Eco32I	GATATC	1 cut(s)	1138
Eco47I	GGWCC	2 cut(s)	170, 982
Eco53kI	GAGCTC	1 cut(s)	215
Eco57I	CTGAAG	2 cut(s)	279, 938
Eco88I	CYCGRG	1 cut(s)	546
EcoICRI	GAGCTC	1 cut(s)	215
EcoRII	CCWGG	4 cut(s)	122, 355, 701, 724
EcoRV	GATATC	1 cut(s)	1138
EcoT14I	CCWWGG	3 cut(s)	368, 605, 1100
EcoT22I	ATGCAT	1 cut(s)	683
EcoT38I	GRGCYC	1 cut(s)	217
ErhI	CCWWGG	3 cut(s)	368, 605, 1100
FaeI	CATG	4 cut(s)	76, 609, 841, 1003
FaqI	GGGAC	1 cut(s)	968
FatI	CATG	4 cut(s)	72, 605, 837, 999
FauI	CCCGC	1 cut(s)	960
FauNDI	CATATG	1 cut(s)	859
FbaI	TGATCA	2 cut(s)	61, 592
FblI	GTMKAC	3 cut(s)	157, 842, 1040
FokI	GGATG	3 cut(s)	253, 350, 1199
FriOI	GRGCYC	1 cut(s)	217
FspBI	CTAG	7 cut(s)	290, 348, 468, 965, 1101, 1179, 1226
GlaI	GCGC	1 cut(s)	222
HaeIII	GGCC	1 cut(s)	813
HapII	CCGG	2 cut(s)	871, 986
HhaI	GCGC	1 cut(s)	223
Hin1II	CATG	4 cut(s)	76, 609, 841, 1003
Hin6I	GCGC	1 cut(s)	221
HinP1I	GCGC	1 cut(s)	221
HincII	GTYRAC	2 cut(s)	339, 439
HindII	GTYRAC	2 cut(s)	339, 439
HindIII	AAGCTT	1 cut(s)	1106
HinfI	GANTC	7 cut(s)	111, 360, 388, 401, 463, 1019, 1031
HpaII	CCGG	2 cut(s)	871, 986
HphI	GGTGA	3 cut(s)	71, 301, 587
Hpy166II	GTNNAC	6 cut(s)	158, 339, 439, 542, 843, 1041
Hpy188I	TCNGA	7 cut(s)	110, 406, 751, 974, 1024, 1036, 1195
Hpy188III	TCNNGA	6 cut(s)	73, 173, 205, 297, 392, 460
Hpy8I	GTNNAC	6 cut(s)	158, 339, 439, 542, 843, 1041
HpyAV	CCTTC	4 cut(s)	121, 211, 966, 1215
HpyCH4III	ACNGT	3 cut(s)	286, 578, 878
HpyCH4IV	ACGT	2 cut(s)	326, 480
HpyCH4V	TGCA	6 cut(s)	4, 48, 234, 570, 621, 681
HpyF10VI	GCNNNNNNNGC	3 cut(s)	525, 567, 1114
HpyF3I	CTNAG	2 cut(s)	971, 1129
HpySE526I	ACGT	2 cut(s)	326, 480
Hsp92II	CATG	4 cut(s)	76, 609, 841, 1003
HspAI	GCGC	1 cut(s)	221
KpnI	GGTACC	1 cut(s)	877
Ksp22I	TGATCA	2 cut(s)	61, 592
LmnI	GCTCC	3 cut(s)	212, 220, 566
LweI	GCATC	4 cut(s)	231, 560, 1019, 1177
MaeI	CTAG	7 cut(s)	290, 348, 468, 965, 1101, 1179, 1226
MaeII	ACGT	2 cut(s)	326, 480
MaeIII	GTNAC	3 cut(s)	131, 494, 912
MflI	RGATCY	5 cut(s)	265, 352, 948, 967, 1166
MhlI	GDGCHC	1 cut(s)	217
MluCI	AATT	1 cut(s)	865
MlyI	GAGTC	1 cut(s)	1040
MmeI	TCCRAC	1 cut(s)	607
Mph1103I	ATGCAT	1 cut(s)	683
MseI	TTAA	2 cut(s)	927, 1086
MslI	CAYNNNNRTG	2 cut(s)	239, 676
MspI	CCGG	2 cut(s)	871, 986
MspR9I	CCNGG	5 cut(s)	124, 357, 703, 726, 986
Mva1269I	GAATGC	1 cut(s)	48
MvaI	CCWGG	4 cut(s)	124, 357, 703, 726
MvnI	CGCG	1 cut(s)	1200
MwoI	GCNNNNNNNGC	3 cut(s)	525, 567, 1114
NciI	CCSGG	1 cut(s)	986
NcoI	CCATGG	1 cut(s)	605
NdeI	CATATG	1 cut(s)	859
NlaIII	CATG	4 cut(s)	76, 609, 841, 1003
NlaIV	GGNNCC	3 cut(s)	354, 875, 984
NsiI	ATGCAT	1 cut(s)	683
PaeR7I	CTCGAG	1 cut(s)	546
PagI	TCATGA	1 cut(s)	72
PcsI	WCGNNNNNNNCGW	1 cut(s)	544
PctI	GAATGC	1 cut(s)	48
PfeI	GAWTC	6 cut(s)	111, 360, 388, 401, 463, 1019
PflFI	GACNNNGTC	1 cut(s)	745
PflMI	CCANNNNNTGG	1 cut(s)	611
PfoI	TCCNGGA	3 cut(s)	355, 701, 984
PleI	GAGTC	1 cut(s)	1039
PpsI	GAGTC	1 cut(s)	1039
Psp124BI	GAGCTC	1 cut(s)	217
Psp6I	CCWGG	4 cut(s)	122, 355, 701, 724
PspGI	CCWGG	4 cut(s)	122, 355, 701, 724
PspN4I	GGNNCC	3 cut(s)	354, 875, 984
PspPI	GGNCC	2 cut(s)	170, 982
PspXI	VCTCGAGB	1 cut(s)	546
PsuI	RGATCY	5 cut(s)	265, 352, 948, 967, 1166
PsyI	GACNNNGTC	1 cut(s)	745
RsaI	GTAC	3 cut(s)	191, 875, 936
RsaNI	GTAC	3 cut(s)	190, 874, 935
RseI	CAYNNNNRTG	2 cut(s)	239, 676
SacI	GAGCTC	1 cut(s)	217
SaqAI	TTAA	2 cut(s)	927, 1086
Sau96I	GGNCC	2 cut(s)	170, 982
ScaI	AGTACT	1 cut(s)	936
SchI	GAGTC	1 cut(s)	1040
ScrFI	CCNGG	5 cut(s)	124, 357, 703, 726, 986
SduI	GDGCHC	1 cut(s)	217
SfaNI	GCATC	4 cut(s)	231, 560, 1019, 1177
SfcI	CTRYAG	1 cut(s)	1005
Sfr274I	CTCGAG	1 cut(s)	546
SinI	GGWCC	2 cut(s)	170, 982
SlaI	CTCGAG	1 cut(s)	546
SmiMI	CAYNNNNRTG	2 cut(s)	239, 676
SmlI	CTYRAG	2 cut(s)	458, 546
SmoI	CTYRAG	2 cut(s)	458, 546
Sse9I	AATT	1 cut(s)	865
SsiI	CCGC	2 cut(s)	953, 1198
SspMI	CTAG	7 cut(s)	290, 348, 468, 965, 1101, 1179, 1226
SstI	GAGCTC	1 cut(s)	217
StyD4I	CCNGG	5 cut(s)	122, 355, 701, 724, 984
StyI	CCWWGG	3 cut(s)	368, 605, 1100
TaaI	ACNGT	3 cut(s)	286, 578, 878
TaiI	ACGT	2 cut(s)	329, 483
TaqI	TCGA	1 cut(s)	547
TasI	AATT	1 cut(s)	865
TatI	WGTACW	1 cut(s)	934
TfiI	GAWTC	6 cut(s)	111, 360, 388, 401, 463, 1019
Tru1I	TTAA	2 cut(s)	927, 1086
Tru9I	TTAA	2 cut(s)	927, 1086
TscAI	CASTG	1 cut(s)	623
TspDTI	ATGAA	3 cut(s)	32, 637, 646
TspGWI	ACGGA	1 cut(s)	1039
TspRI	CASTG	1 cut(s)	623
Tth111I	GACNNNGTC	1 cut(s)	745
Van91I	CCANNNNNTGG	1 cut(s)	611
VpaK11BI	GGWCC	2 cut(s)	170, 982
XapI	RAATTY	1 cut(s)	865
XhoI	CTCGAG	1 cut(s)	546
XmaJI	CCTAGG	1 cut(s)	1100
XmiI	GTMKAC	3 cut(s)	157, 842, 1040
XspI	CTAG	7 cut(s)	290, 348, 468, 965, 1101, 1179, 1226
ZrmI	AGTACT	1 cut(s)	936
Zsp2I	ATGCAT	1 cut(s)	683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.