Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007585

Physical Location & Seq

Genomic Coordinates Forward (+)

3053582 .. 3059760

Gene Structure 6179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G020700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGAGTAGGAAAAAGAGCCAAGTTTGGGATGTTCCCTCCAATGGCATGGACGACGACACAGCCGTGGCTCCTCCTCCGAAGCCCAGCCCTGAAAAAGAAAGACTCTACCTAGTCTGGCAGGGTAACAATAAATTTTTGTGTGGTGGAAGAATAGTCTTTGGTCATGATGCTGCATCACTGTTTCTAACTAGCTTTTTGATTGGATGTCCTGCACTAACATTCTGCATAAGAATGCTTGTAACGATGAAAGGAGAACATGGACATTATGACTATCCTGTACTAACTGGGGGAATAATCCTCACTGTTTTGGATTTCACTTTTCTGTACTTGACATCTGGTAGGGATCCTGGTATCATTCCAAGGAACTCTCGACCACCTGATTCTGATGAGGCATATGATATGTCTGGATCGATGGAGTGGGTCAATAACAAAGCCTCTAATTTGAGAATACCCCGAATAAAGGATGTACAGGTCAATGGCCATGTAGTGAAGGTAAAGTTTTGTGACACTTGTTTGCTATATCGTCCACCGCGTGCTTCTCATTGCTCGATCTGCAACAACTGTGTTCAGAAGTTTGATCACCACTGTCCATGGGTGGGTCAGTGTATTGGATTACGTAACTATCCATTTTTCATTTTGTTTATTTCGTCATCAACCTTCCTGTGCATATATGTCTTTGTCTTGTCTTGGATCAACATTCTTCGACAAGGTGGCAATCTGTGGAGGGCTATGGGACATGACATCGTATCAGTTATTCTCATAGTATATTGCTTTGTAGCAGTATGGTTTGTTGGTGGGCTAACAGTTTTCCATATCTATCTAATTTGCACCAACCAGACGACTTATGAGAATTTTCGTTACCGTTACGATAAGAATGAAAACCCATACACTAAGGGAGTACTGGGAAACTTGAAAGAAGTGTTCTGCTCAAGGATTCCACCTTCAATGGTCAACTTCCGAGCATGGGTCTCAAAAGACGACGACACAGTAATGGGATCCATCGCTTCAGAGAGTAACAGAGGCTTCATTGGCTCCAAAGAGAAATTTGACATGGAAAGGGGAAGTAAGTTTGGCAAGGATGGGAATATGATGGTTCCAAGTATTTTGCAGAAATTGGACTACAGTGGGATTGATGATAACATGAAGAAGAAGAATTTGGGTAGCAGTGATTTTGATGATAATTTAAAACGGAACGCAGCAGATGAACCTGCATTAAATCCATTTATCTTTCCTATTGGTCAAGAACAAAGACGTTCACAGGGAAGTTCCGGCATTGGAGTTAATTCTACTAATGATAAGAGGCCTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04391 map04391

Pfam Domains

Protein Families

DHHC

Protein Analysis

437

Amino Acids

49.2

Weight (kDa)

8.65

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40990 AT3G56920 AT5G05070
fragaria_vesca	FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200 FvH4_1g29200
malus_domestica	MD00G1068100.v1.1 MD00G1118200.v1.1
prunus_persica	Prupe.7G020700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0494561
rosa_laevigata	RLG00000022669
rosa_multiflora	Rmu_sc0001610.1_g000001
rosa_rugosa	Rorug03G0265800 Rorug03G0265900
rosa_samantha	Rh3AG315900 Rh3BG351400 Rh3CG348000 Rh3DG350600
rosa_wichuraiana	Rw3G027580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1216
AccII	CGCG	1 cut(s)	532
AciI	CCGC	1 cut(s)	530
AclWI	GGATC	6 cut(s)	338, 351, 415, 698, 990, 1003
AcoI	YGGCCR	1 cut(s)	478
AcsI	RAATTY	4 cut(s)	131, 850, 1043, 1153
AcuI	CTGAAG	1 cut(s)	990
AdeI	CACNNNGTG	1 cut(s)	533
AfaI	GTAC	4 cut(s)	279, 326, 468, 900
AfiI	CCNNNNNNNGG	5 cut(s)	25, 41, 460, 596, 964
AgsI	TTSAA	2 cut(s)	913, 945
AjnI	CCWGG	1 cut(s)	346
AjuI	GAANNNNNNNTTGG	2 cut(s)	1139, 1171
AleI	CACNNNNGTG	1 cut(s)	62
AluBI	AGCT	1 cut(s)	192
AluI	AGCT	1 cut(s)	192
Alw26I	GTCTC	1 cut(s)	973
AlwI	GGATC	6 cut(s)	338, 351, 415, 698, 990, 1003
AoxI	GGCC	2 cut(s)	478, 1301
ApeKI	GCWGC	2 cut(s)	170, 1196
ApoI	RAATTY	4 cut(s)	131, 850, 1043, 1153
AsuHPI	GGTGA	1 cut(s)	572
BalI	TGGCCA	1 cut(s)	480
BamHI	GGATCC	2 cut(s)	343, 995
BbvI	GCAGC	2 cut(s)	157, 1208
BccI	CCATC	4 cut(s)	406, 1007, 1073, 1084
BceAI	ACGGC	1 cut(s)	47
BciT130I	CCWGG	1 cut(s)	348
BclI	TGATCA	1 cut(s)	577
BcoDI	GTCTC	1 cut(s)	973
BfaI	CTAG	2 cut(s)	110, 189
BfmI	CTRYAG	1 cut(s)	1120
BfuAI	ACCTGC	1 cut(s)	1216
BisI	GCNGC	2 cut(s)	171, 1197
BlsI	GCNGC	2 cut(s)	172, 1198
BmcAI	AGTACT	1 cut(s)	900
Bme1390I	CCNGG	1 cut(s)	348
BmiI	GGNNCC	5 cut(s)	69, 345, 997, 1033, 1095
BmrFI	CCNGG	1 cut(s)	348
BmrI	ACTGGG	2 cut(s)	294, 911
BmsI	GCATC	2 cut(s)	157, 182
BmuI	ACTGGG	2 cut(s)	294, 911
BpuEI	CTTGAG	1 cut(s)	913
Bsa29I	ATCGAT	1 cut(s)	410
BsaAI	YACGTR	1 cut(s)	617
BsaI	GGTCTC	1 cut(s)	973
BsaJI	CCNNGG	3 cut(s)	63, 359, 590
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 41, 460, 596, 964
Bse1I	ACTGG	2 cut(s)	289, 906
Bse3DI	GCAATG	1 cut(s)	541
BseBI	CCWGG	1 cut(s)	348
BseCI	ATCGAT	1 cut(s)	410
BseDI	CCNNGG	3 cut(s)	63, 359, 590
BseGI	GGATG	4 cut(s)	34, 209, 469, 1084
BseLI	CCNNNNNNNGG	5 cut(s)	25, 41, 460, 596, 964
BseMI	GCAATG	1 cut(s)	541
BseNI	ACTGG	2 cut(s)	289, 906
BseRI	GAGGAG	2 cut(s)	60, 63
BseXI	GCAGC	2 cut(s)	157, 1208
BseYI	CCCAGC	1 cut(s)	83
BsgI	GTGCAG	1 cut(s)	195
Bsh1236I	CGCG	1 cut(s)	532
BshFI	GGCC	2 cut(s)	480, 1303
BshVI	ATCGAT	1 cut(s)	410
BsiSI	CCGG	1 cut(s)	1269
BslFI	GGGAC	1 cut(s)	747
BslI	CCNNNNNNNGG	5 cut(s)	25, 41, 460, 596, 964
BsmAI	GTCTC	1 cut(s)	973
BsmFI	GGGAC	1 cut(s)	747
BsmI	GAATGC	1 cut(s)	237
BsnI	GGCC	2 cut(s)	480, 1303
Bso31I	GGTCTC	1 cut(s)	973
Bsp1407I	TGTACA	1 cut(s)	466
Bsp143I	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
Bsp19I	CCATGG	1 cut(s)	590
BspACI	CCGC	1 cut(s)	530
BspANI	GGCC	2 cut(s)	480, 1303
BspDI	ATCGAT	1 cut(s)	410
BspFNI	CGCG	1 cut(s)	532
BspHI	TCATGA	1 cut(s)	163
BspLI	GGNNCC	5 cut(s)	69, 345, 997, 1033, 1095
BspMI	ACCTGC	1 cut(s)	1216
BspPI	GGATC	6 cut(s)	338, 351, 415, 698, 990, 1003
BspTNI	GGTCTC	1 cut(s)	973
BsrDI	GCAATG	1 cut(s)	541
BsrGI	TGTACA	1 cut(s)	466
BsrI	ACTGG	2 cut(s)	289, 906
BssECI	CCNNGG	3 cut(s)	63, 359, 590
BssMI	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
BssT1I	CCWWGG	2 cut(s)	359, 590
Bst2UI	CCWGG	1 cut(s)	348
Bst4CI	ACNGT	8 cut(s)	180, 304, 563, 587, 805, 863, 988, 1124
BstAUI	TGTACA	1 cut(s)	466
BstBAI	YACGTR	1 cut(s)	617
BstC8I	GCNNGC	1 cut(s)	534
BstDEI	CTNAG	2 cut(s)	891, 1305
BstDSI	CCRYGG	2 cut(s)	63, 590
BstF5I	GGATG	4 cut(s)	34, 209, 469, 1084
BstFNI	CGCG	1 cut(s)	532
BstKTI	GATC	6 cut(s)	346, 410, 552, 580, 693, 998
BstMAI	GTCTC	1 cut(s)	973
BstMBI	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
BstMWI	GCNNNNNNNGC	2 cut(s)	552, 1029
BstNI	CCWGG	1 cut(s)	348
BstSCI	CCNGG	1 cut(s)	346
BstSFI	CTRYAG	1 cut(s)	1120
BstSNI	TACGTA	1 cut(s)	617
BstUI	CGCG	1 cut(s)	532
BstV1I	GCAGC	2 cut(s)	157, 1208
BstX2I	RGATCY	2 cut(s)	343, 995
BstXI	CCANNNNNNTGG	1 cut(s)	46
BstYI	RGATCY	2 cut(s)	343, 995
Bsu15I	ATCGAT	1 cut(s)	410
BsuRI	GGCC	2 cut(s)	480, 1303
BsuTUI	ATCGAT	1 cut(s)	410
BtgI	CCRYGG	2 cut(s)	63, 590
BtgZI	GCGATG	1 cut(s)	985
BtsCI	GGATG	4 cut(s)	34, 209, 469, 1084
BtsI	GCAGTG	1 cut(s)	1171
BtsIMutI	CAGTG	6 cut(s)	176, 300, 583, 608, 1129, 1171
BveI	ACCTGC	1 cut(s)	1216
Cac8I	GCNNGC	1 cut(s)	534
CciI	TCATGA	1 cut(s)	163
ClaI	ATCGAT	1 cut(s)	410
Csp6I	GTAC	4 cut(s)	278, 325, 467, 899
CviAII	CATG	9 cut(s)	46, 164, 257, 482, 591, 737, 963, 1051, 1141
CviQI	GTAC	4 cut(s)	278, 325, 467, 899
DdeI	CTNAG	2 cut(s)	891, 1305
DpnI	GATC	6 cut(s)	345, 409, 551, 579, 692, 997
DpnII	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
DraI	TTTAAA	1 cut(s)	1185
DraIII	CACNNNGTG	1 cut(s)	533
EaeI	YGGCCR	1 cut(s)	478
Eco105I	TACGTA	1 cut(s)	617
Eco130I	CCWWGG	2 cut(s)	359, 590
Eco147I	AGGCCT	1 cut(s)	1303
Eco31I	GGTCTC	1 cut(s)	973
Eco57I	CTGAAG	1 cut(s)	990
EcoRII	CCWGG	1 cut(s)	346
EcoT14I	CCWWGG	2 cut(s)	359, 590
ErhI	CCWWGG	2 cut(s)	359, 590
FaeI	CATG	9 cut(s)	49, 167, 260, 485, 594, 740, 966, 1054, 1144
FaqI	GGGAC	1 cut(s)	747
FatI	CATG	9 cut(s)	45, 163, 256, 481, 590, 736, 962, 1050, 1140
FauNDI	CATATG	1 cut(s)	394
FbaI	TGATCA	1 cut(s)	577
Fnu4HI	GCNGC	2 cut(s)	171, 1197
FokI	GGATG	4 cut(s)	41, 216, 476, 1091
Fsp4HI	GCNGC	2 cut(s)	171, 1197
FspBI	CTAG	2 cut(s)	110, 189
GluI	GCNGC	2 cut(s)	171, 1197
GsaI	CCCAGC	1 cut(s)	87
HaeIII	GGCC	2 cut(s)	480, 1303
HapII	CCGG	1 cut(s)	1269
Hin1II	CATG	9 cut(s)	49, 167, 260, 485, 594, 740, 966, 1054, 1144
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HinfI	GANTC	3 cut(s)	102, 380, 934
HpaII	CCGG	1 cut(s)	1269
HphI	GGTGA	1 cut(s)	572
Hpy166II	GTNNAC	3 cut(s)	527, 952, 1256
Hpy188I	TCNGA	5 cut(s)	78, 385, 570, 959, 1009
Hpy188III	TCNNGA	4 cut(s)	164, 369, 405, 1241
Hpy8I	GTNNAC	3 cut(s)	527, 952, 1256
Hpy99I	CGWCG	2 cut(s)	56, 983
HpyAV	CCTTC	3 cut(s)	484, 667, 951
HpyCH4III	ACNGT	8 cut(s)	180, 304, 563, 587, 805, 863, 988, 1124
HpyCH4IV	ACGT	2 cut(s)	616, 1252
HpyCH4V	TGCA	8 cut(s)	173, 212, 225, 555, 666, 828, 1108, 1211
HpyF10VI	GCNNNNNNNGC	2 cut(s)	552, 1029
HpyF3I	CTNAG	2 cut(s)	891, 1305
HpySE526I	ACGT	2 cut(s)	616, 1252
Hsp92II	CATG	9 cut(s)	49, 167, 260, 485, 594, 740, 966, 1054, 1144
Ksp22I	TGATCA	1 cut(s)	577
Kzo9I	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
LmnI	GCTCC	2 cut(s)	73, 1037
Lsp1109I	GCAGC	2 cut(s)	157, 1208
LweI	GCATC	2 cut(s)	157, 182
MaeI	CTAG	2 cut(s)	110, 189
MaeII	ACGT	2 cut(s)	616, 1252
MaeIII	GTNAC	7 cut(s)	122, 238, 503, 617, 857, 863, 1013
MalI	GATC	6 cut(s)	345, 409, 551, 579, 692, 997
MboI	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
MboII	GAAGA	5 cut(s)	159, 692, 1156, 1159, 1162
MflI	RGATCY	2 cut(s)	343, 995
MlsI	TGGCCA	1 cut(s)	480
MluCI	AATT	9 cut(s)	131, 439, 822, 850, 1043, 1112, 1153, 1180, 1282
MluNI	TGGCCA	1 cut(s)	480
MlyI	GAGTC	1 cut(s)	96
MnlI	CCTC	9 cut(s)	46, 81, 84, 308, 382, 445, 717, 1013, 1293
Mox20I	TGGCCA	1 cut(s)	480
MscI	TGGCCA	1 cut(s)	480
MseI	TTAA	3 cut(s)	1184, 1214, 1281
MslI	CAYNNNNRTG	3 cut(s)	62, 230, 989
Msp20I	TGGCCA	1 cut(s)	480
MspI	CCGG	1 cut(s)	1269
MspR9I	CCNGG	1 cut(s)	348
Mva1269I	GAATGC	1 cut(s)	237
MvaI	CCWGG	1 cut(s)	348
MvnI	CGCG	1 cut(s)	532
MwoI	GCNNNNNNNGC	2 cut(s)	552, 1029
NcoI	CCATGG	1 cut(s)	590
NdeI	CATATG	1 cut(s)	394
NdeII	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
NlaIII	CATG	9 cut(s)	49, 167, 260, 485, 594, 740, 966, 1054, 1144
NlaIV	GGNNCC	5 cut(s)	69, 345, 997, 1033, 1095
NmuCI	GTSAC	1 cut(s)	503
OliI	CACNNNNGTG	1 cut(s)	62
PagI	TCATGA	1 cut(s)	163
PceI	AGGCCT	1 cut(s)	1303
PcsI	WCGNNNNNNNCGW	2 cut(s)	60, 529
PctI	GAATGC	1 cut(s)	237
PfeI	GAWTC	2 cut(s)	380, 934
PkrI	GCNGC	2 cut(s)	172, 1198
PleI	GAGTC	1 cut(s)	96
PpsI	GAGTC	1 cut(s)	96
Ppu21I	YACGTR	1 cut(s)	617
Psp6I	CCWGG	1 cut(s)	346
PspFI	CCCAGC	1 cut(s)	83
PspGI	CCWGG	1 cut(s)	346
PspN4I	GGNNCC	5 cut(s)	69, 345, 997, 1033, 1095
PsuI	RGATCY	2 cut(s)	343, 995
RsaI	GTAC	4 cut(s)	279, 326, 468, 900
RsaNI	GTAC	4 cut(s)	278, 325, 467, 899
RseI	CAYNNNNRTG	3 cut(s)	62, 230, 989
SaqAI	TTAA	3 cut(s)	1184, 1214, 1281
SatI	GCNGC	2 cut(s)	171, 1197
Sau3AI	GATC	6 cut(s)	343, 407, 549, 577, 690, 995
ScaI	AGTACT	1 cut(s)	900
SchI	GAGTC	1 cut(s)	96
ScrFI	CCNGG	1 cut(s)	348
SfaNI	GCATC	2 cut(s)	157, 182
SfcI	CTRYAG	1 cut(s)	1120
SmiMI	CAYNNNNRTG	3 cut(s)	62, 230, 989
SmlI	CTYRAG	1 cut(s)	928
SmoI	CTYRAG	1 cut(s)	928
SnaBI	TACGTA	1 cut(s)	617
Sse9I	AATT	9 cut(s)	131, 439, 822, 850, 1043, 1112, 1153, 1180, 1282
SseBI	AGGCCT	1 cut(s)	1303
SsiI	CCGC	1 cut(s)	530
SspMI	CTAG	2 cut(s)	110, 189
StuI	AGGCCT	1 cut(s)	1303
StyD4I	CCNGG	1 cut(s)	346
StyI	CCWWGG	2 cut(s)	359, 590
TaaI	ACNGT	8 cut(s)	180, 304, 563, 587, 805, 863, 988, 1124
TaiI	ACGT	2 cut(s)	619, 1255
TaqI	TCGA	4 cut(s)	370, 410, 548, 703
TasI	AATT	9 cut(s)	131, 439, 822, 850, 1043, 1112, 1153, 1180, 1282
TatI	WGTACW	4 cut(s)	277, 324, 466, 898
TfiI	GAWTC	2 cut(s)	380, 934
Tru1I	TTAA	3 cut(s)	1184, 1214, 1281
Tru9I	TTAA	3 cut(s)	1184, 1214, 1281
TscAI	CASTG	6 cut(s)	183, 307, 590, 608, 1129, 1171
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	2 cut(s)	170, 1196
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	6 cut(s)	260, 622, 891, 1015, 1157, 1218
TspGWI	ACGGA	1 cut(s)	1204
TspRI	CASTG	6 cut(s)	183, 307, 590, 608, 1129, 1171
XapI	RAATTY	4 cut(s)	131, 850, 1043, 1153
XspI	CTAG	2 cut(s)	110, 189
ZrmI	AGTACT	1 cut(s)	900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.