Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006721

Physical Location & Seq

Genomic Coordinates Reverse (-)

2191385 .. 2193416

Gene Structure 2032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G07050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGTCGATGGAGGAGATTAGTAGCTGTGAGAGCTTTCTCACAAGCTCTAAACCCTACTTCGCCATGATATCTCTCCAGTTTGGCTACGCCGGCATGAATATAATTACCAAAATATCCCTCAACACCGGTATGAGCCACTATGTCCTTGTCGTCTACCGCCATGCAATTGCCACCGCCGTTATTGCACCCTTTGCTTTCTTCTTCGAAAGGAAGGCTCAGCCGAAAATAACGTTCTCCATTTTCATGCAACTATTCATTCTCGGCCTTCTTGGGCCAGTGATCGATCAAAACTTCTACTACATGGGGCTGAAATATACGTCCCCAACGTTCTCATGCGCCATGAGTAACATGCTTCCGGCCATGACCTTTATCTTGGCTGTACTATTCCGGATGGAGATGTTGGACCTGAAGAAACTGTGGTGTCAGGCGAAAATAGCCGGAACGGTAGTGACAGTGGCGGGAGCGATGCTAATGACAATTTACAAAGGACCCATCGTTGAGCTATTTTGGACCAAATATATGCATATTCAAGACTCTTCACATGCTAATACGACGTCGTCTAAGAACTCATCAAGTGATAAGGAATTCCTCAAAGGCTCCATCCTCCTAATCTTTGCAACACTCGCTTGGGCCTCCCTCTTTGTTCTACAGGCAAAGATACTAAAGACGTACGCGAAGCATCAGCTTTCTCTAACAACACTAATTTGCTTCATCGGAACACTACAAGCAGTTGCTGTGACGTTTGTGATGGAACACAACCCCTCTGCTTGGAGAATTGGCTGGGACATGAACCTCCTTGCCGCCGCTTACTCTGGGATTGTGGCATCAAGTATCTCATACTATGTGCAAGGGATAGTGATGAAGAAAAGAGGACCTGTGTTTGCTACTGCCTTTAGTCCTTTGATGATGGTTATTGTTGCTGTCATGGGTTCTTTTGTCTTGGCAGAAAAAATCTTCCTTGGAGGGGTGATTGGTGCGGTACTGATTGTAATTGGACTGTATGCTGTCTTATGGGGAAAGCAAAAGGAGAATCAAGTGACTATATGTGAACTAGCCAAGATTGACTCAAATAGTAAAGTAACTGAAGATGTGGAAGCTAATGGATCTAAAATGAAAATCTCGGAAGGGGATAACTCTATGCTCTCTACGATTGTAATCAGCGTACCACTGTCGGAAACACATTTGAAAAAGACTATCCAAGAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

402

Amino Acids

44.36

Weight (kDa)

9.07

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	19 - 159	3.4e-13	EamA-like transporter family
EamA	PF00892	198 - 337	3.8e-12	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07050
fragaria_vesca	FvH4_1g29310 FvH4_1g29310 FvH4_7g04090 FvH4_7g04090
malus_domestica	MD02G1275400.v1.1 MD07G1043300.v1.1
prunus_persica	Prupe.2G045500_v2.0.a1 Prupe.2G045500_v2.0.a1
pyrus_communis	pycom02g23550 pycom07g03070
rosa_chinensis	RchiOBHm_Chr1g0327951 RchiOBHm_Chr3g0494821
rosa_laevigata	RLG00000022660 RLG00000029957
rosa_multiflora	Rmu_sc0000198.1_g000011 Rmu_ssc0000467.1_g000050
rosa_roxburghii	Rroxscaffold_4G00322120 Rroxscaffold_6G00390890
rosa_rugosa	Rorug01G0072500 Rorug03G0268300
rosa_samantha	Rh1BG071100 Rh1CG086600 Rh3DG351800
rosa_wichuraiana	Rw1G006880 Rw3G027680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	557
AccI	GTMKAC	1 cut(s)	153
AccII	CGCG	1 cut(s)	674
AccIII	TCCGGA	1 cut(s)	387
AciI	CCGC	6 cut(s)	157, 174, 458, 801, 804, 977
AclI	AACGTT	2 cut(s)	230, 326
AclWI	GGATC	1 cut(s)	1111
AcoI	YGGCCR	1 cut(s)	357
AcsI	RAATTY	1 cut(s)	584
AcuI	CTGAAG	2 cut(s)	428, 1104
AcyI	GRCGYC	1 cut(s)	554
AfaI	GTAC	4 cut(s)	381, 671, 981, 1164
AfiI	CCNNNNNNNGG	2 cut(s)	768, 964
AgeI	ACCGGT	1 cut(s)	125
AgsI	TTSAA	2 cut(s)	530, 1186
AluBI	AGCT	6 cut(s)	24, 33, 45, 502, 685, 1097
AluI	AGCT	6 cut(s)	24, 33, 45, 502, 685, 1097
AlwI	GGATC	1 cut(s)	1111
AlwNI	CAGNNNCTG	1 cut(s)	734
Aor13HI	TCCGGA	1 cut(s)	387
AoxI	GGCC	4 cut(s)	262, 272, 357, 630
ApoI	RAATTY	1 cut(s)	584
AsiGI	ACCGGT	1 cut(s)	125
AspLEI	GCGC	1 cut(s)	338
AspS9I	GGNCC	6 cut(s)	272, 403, 488, 510, 630, 872
AsuHPI	GGTGA	1 cut(s)	979
AsuII	TTCGAA	1 cut(s)	204
AvaII	GGWCC	4 cut(s)	403, 488, 510, 872
BccI	CCATC	5 cut(s)	385, 500, 608, 742, 901
BceAI	ACGGC	1 cut(s)	161
BfaI	CTAG	1 cut(s)	1052
BfmI	CTRYAG	1 cut(s)	647
BisI	GCNGC	2 cut(s)	801, 804
BlpI	GCTNAGC	1 cut(s)	216
BlsI	GCNGC	2 cut(s)	802, 805
Bme18I	GGWCC	4 cut(s)	403, 488, 510, 872
BmgT120I	GGNCC	6 cut(s)	272, 403, 488, 510, 630, 872
BmiI	GGNNCC	2 cut(s)	490, 598
BmsI	GCATC	3 cut(s)	456, 688, 833
BpmI	CTGGAG	1 cut(s)	59
Bpu1102I	GCTNAGC	1 cut(s)	216
Bpu14I	TTCGAA	1 cut(s)	204
Bsa29I	ATCGAT	1 cut(s)	282
BsaBI	GATNNNNATC	1 cut(s)	1154
BsaHI	GRCGYC	1 cut(s)	554
BsaJI	CCNNGG	1 cut(s)	958
BsaWI	WCCGGW	2 cut(s)	125, 387
Bsc4I	CCNNNNNNNGG	2 cut(s)	768, 964
Bse118I	RCCGGY	2 cut(s)	89, 125
Bse1I	ACTGG	2 cut(s)	76, 275
Bse8I	GATNNNNATC	1 cut(s)	1154
BseAI	TCCGGA	1 cut(s)	387
BseCI	ATCGAT	1 cut(s)	282
BseDI	CCNNGG	1 cut(s)	958
BseGI	GGATG	2 cut(s)	396, 600
BseJI	GATNNNNATC	1 cut(s)	1154
BseLI	CCNNNNNNNGG	2 cut(s)	768, 964
BseMII	CTCAG	1 cut(s)	230
BseNI	ACTGG	2 cut(s)	76, 275
BseRI	GAGGAG	1 cut(s)	26
BseYI	CCCAGC	1 cut(s)	780
Bsh1236I	CGCG	1 cut(s)	674
BshFI	GGCC	4 cut(s)	264, 274, 359, 632
BshTI	ACCGGT	1 cut(s)	125
BshVI	ATCGAT	1 cut(s)	282
BsiSI	CCGG	5 cut(s)	90, 126, 356, 388, 438
BsiWI	CGTACG	1 cut(s)	669
BslFI	GGGAC	2 cut(s)	304, 797
BslI	CCNNNNNNNGG	2 cut(s)	768, 964
BsmFI	GGGAC	2 cut(s)	304, 797
BsnI	GGCC	4 cut(s)	264, 274, 359, 632
Bsp119I	TTCGAA	1 cut(s)	204
Bsp13I	TCCGGA	1 cut(s)	387
Bsp143I	GATC	3 cut(s)	279, 283, 1103
Bsp1720I	GCTNAGC	1 cut(s)	216
BspACI	CCGC	6 cut(s)	157, 174, 458, 801, 804, 977
BspANI	GGCC	4 cut(s)	264, 274, 359, 632
BspCNI	CTCAG	1 cut(s)	229
BspDI	ATCGAT	1 cut(s)	282
BspEI	TCCGGA	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	674
BspLI	GGNNCC	2 cut(s)	490, 598
BspPI	GGATC	1 cut(s)	1111
BspT104I	TTCGAA	1 cut(s)	204
BsrFI	RCCGGY	2 cut(s)	89, 125
BsrI	ACTGG	2 cut(s)	76, 275
BssAI	RCCGGY	2 cut(s)	89, 125
BssECI	CCNNGG	1 cut(s)	958
BssMI	GATC	3 cut(s)	279, 283, 1103
BssNI	GRCGYC	1 cut(s)	554
BssT1I	CCWWGG	1 cut(s)	958
Bst4CI	ACNGT	5 cut(s)	417, 445, 454, 999, 1170
Bst6I	CTCTTC	1 cut(s)	541
BstACI	GRCGYC	1 cut(s)	554
BstAPI	GCANNNNNTGC	1 cut(s)	191
BstBI	TTCGAA	1 cut(s)	204
BstC8I	GCNNGC	1 cut(s)	91
BstDEI	CTNAG	2 cut(s)	216, 561
BstF5I	GGATG	2 cut(s)	396, 600
BstFNI	CGCG	1 cut(s)	674
BstHHI	GCGC	1 cut(s)	338
BstKTI	GATC	3 cut(s)	282, 286, 1106
BstMBI	GATC	3 cut(s)	279, 283, 1103
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 90, 182, 191, 434, 623
BstNSI	RCATGY	2 cut(s)	352, 545
BstSFI	CTRYAG	1 cut(s)	647
BstUI	CGCG	1 cut(s)	674
BstX2I	RGATCY	1 cut(s)	1103
BstYI	RGATCY	1 cut(s)	1103
Bsu15I	ATCGAT	1 cut(s)	282
BsuRI	GGCC	4 cut(s)	264, 274, 359, 632
BsuTUI	ATCGAT	1 cut(s)	282
BtgZI	GCGATG	1 cut(s)	479
BtsCI	GGATG	2 cut(s)	396, 600
BtsIMutI	CAGTG	3 cut(s)	282, 459, 1166
Cac8I	GCNNGC	1 cut(s)	91
CaiI	CAGNNNCTG	1 cut(s)	734
CfoI	GCGC	1 cut(s)	338
Cfr10I	RCCGGY	2 cut(s)	89, 125
Cfr13I	GGNCC	6 cut(s)	272, 403, 488, 510, 630, 872
ClaI	ATCGAT	1 cut(s)	282
Csp6I	GTAC	4 cut(s)	380, 670, 980, 1163
CspAI	ACCGGT	1 cut(s)	125
CviQI	GTAC	4 cut(s)	380, 670, 980, 1163
DdeI	CTNAG	2 cut(s)	216, 561
DpnI	GATC	3 cut(s)	281, 285, 1105
DpnII	GATC	3 cut(s)	279, 283, 1103
EaeI	YGGCCR	1 cut(s)	357
Eam1104I	CTCTTC	1 cut(s)	541
EarI	CTCTTC	1 cut(s)	541
Eco130I	CCWWGG	1 cut(s)	958
Eco32I	GATATC	1 cut(s)	69
Eco47I	GGWCC	4 cut(s)	403, 488, 510, 872
Eco57I	CTGAAG	2 cut(s)	428, 1104
EcoO109I	RGGNCCY	2 cut(s)	488, 872
EcoRI	GAATTC	1 cut(s)	584
EcoRV	GATATC	1 cut(s)	69
EcoT14I	CCWWGG	1 cut(s)	958
EcoT22I	ATGCAT	1 cut(s)	525
ErhI	CCWWGG	1 cut(s)	958
FaqI	GGGAC	2 cut(s)	304, 797
FauI	CCCGC	1 cut(s)	451
FblI	GTMKAC	1 cut(s)	153
Fnu4HI	GCNGC	2 cut(s)	801, 804
FokI	GGATG	2 cut(s)	403, 587
Fsp4HI	GCNGC	2 cut(s)	801, 804
FspBI	CTAG	1 cut(s)	1052
GlaI	GCGC	1 cut(s)	337
GluI	GCNGC	2 cut(s)	801, 804
GsaI	CCCAGC	1 cut(s)	784
GsuI	CTGGAG	1 cut(s)	59
HaeIII	GGCC	4 cut(s)	264, 274, 359, 632
HapII	CCGG	5 cut(s)	90, 126, 356, 388, 438
HhaI	GCGC	1 cut(s)	338
Hin1I	GRCGYC	1 cut(s)	554
Hin6I	GCGC	1 cut(s)	336
HinP1I	GCGC	1 cut(s)	336
HinfI	GANTC	3 cut(s)	533, 1030, 1064
HpaII	CCGG	5 cut(s)	90, 126, 356, 388, 438
HphI	GGTGA	1 cut(s)	979
Hpy166II	GTNNAC	2 cut(s)	154, 1049
Hpy188I	TCNGA	3 cut(s)	716, 1123, 1174
Hpy188III	TCNNGA	2 cut(s)	388, 530
Hpy8I	GTNNAC	2 cut(s)	154, 1049
Hpy99I	CGWCG	2 cut(s)	556, 559
HpyAV	CCTTC	3 cut(s)	205, 275, 1118
HpyCH4III	ACNGT	5 cut(s)	417, 445, 454, 999, 1170
HpyCH4IV	ACGT	6 cut(s)	230, 317, 326, 554, 668, 740
HpyCH4V	TGCA	6 cut(s)	164, 185, 247, 523, 617, 847
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 90, 182, 191, 434, 623
HpyF3I	CTNAG	2 cut(s)	216, 561
HpySE526I	ACGT	6 cut(s)	230, 317, 326, 554, 668, 740
Hsp92I	GRCGYC	1 cut(s)	554
HspAI	GCGC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	387
KroI	GCCGGC	1 cut(s)	89
KroNI	GCCGGC	1 cut(s)	91
Kzo9I	GATC	3 cut(s)	279, 283, 1103
LmnI	GCTCC	2 cut(s)	461, 602
LweI	GCATC	3 cut(s)	456, 688, 833
MaeI	CTAG	1 cut(s)	1052
MaeII	ACGT	6 cut(s)	230, 317, 326, 554, 668, 740
MaeIII	GTNAC	5 cut(s)	344, 448, 736, 1036, 1078
MalI	GATC	3 cut(s)	281, 285, 1105
MboI	GATC	3 cut(s)	279, 283, 1103
MboII	GAAGA	7 cut(s)	190, 193, 421, 528, 874, 946, 1097
MfeI	CAATTG	1 cut(s)	165
MflI	RGATCY	1 cut(s)	1103
MluCI	AATT	7 cut(s)	102, 165, 477, 584, 702, 774, 990
MlyI	GAGTC	2 cut(s)	527, 1058
MmeI	TCCRAC	2 cut(s)	381, 1152
Mph1103I	ATGCAT	1 cut(s)	525
MroI	TCCGGA	1 cut(s)	387
MroNI	GCCGGC	1 cut(s)	89
MslI	CAYNNNNRTG	2 cut(s)	128, 242
MspI	CCGG	5 cut(s)	90, 126, 356, 388, 438
MunI	CAATTG	1 cut(s)	165
MvnI	CGCG	1 cut(s)	674
MwoI	GCNNNNNNNGC	6 cut(s)	30, 90, 182, 191, 434, 623
NaeI	GCCGGC	1 cut(s)	91
NdeII	GATC	3 cut(s)	279, 283, 1103
NgoMIV	GCCGGC	1 cut(s)	89
NlaIV	GGNNCC	2 cut(s)	490, 598
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	3 cut(s)	448, 736, 1036
NsiI	ATGCAT	1 cut(s)	525
NspI	RCATGY	2 cut(s)	352, 545
NspV	TTCGAA	1 cut(s)	204
PcsI	WCGNNNNNNNCGW	1 cut(s)	323
PdiI	GCCGGC	1 cut(s)	91
PfeI	GAWTC	1 cut(s)	1030
Pfl23II	CGTACG	1 cut(s)	669
PflFI	GACNNNGTC	1 cut(s)	556
PinAI	ACCGGT	1 cut(s)	125
PkrI	GCNGC	2 cut(s)	802, 805
PleI	GAGTC	2 cut(s)	527, 1058
PpsI	GAGTC	2 cut(s)	527, 1058
PpuMI	RGGWCCY	2 cut(s)	488, 872
Psp1406I	AACGTT	2 cut(s)	230, 326
Psp5II	RGGWCCY	2 cut(s)	488, 872
PspFI	CCCAGC	1 cut(s)	780
PspLI	CGTACG	1 cut(s)	669
PspN4I	GGNNCC	2 cut(s)	490, 598
PspPI	GGNCC	6 cut(s)	272, 403, 488, 510, 630, 872
PspPPI	RGGWCCY	2 cut(s)	488, 872
PstNI	CAGNNNCTG	1 cut(s)	734
PsuI	RGATCY	1 cut(s)	1103
PsyI	GACNNNGTC	1 cut(s)	556
RsaI	GTAC	4 cut(s)	381, 671, 981, 1164
RsaNI	GTAC	4 cut(s)	380, 670, 980, 1163
RseI	CAYNNNNRTG	2 cut(s)	128, 242
SatI	GCNGC	2 cut(s)	801, 804
Sau3AI	GATC	3 cut(s)	279, 283, 1103
Sau96I	GGNCC	6 cut(s)	272, 403, 488, 510, 630, 872
SchI	GAGTC	2 cut(s)	527, 1058
SfaNI	GCATC	3 cut(s)	456, 688, 833
SfcI	CTRYAG	1 cut(s)	647
SfuI	TTCGAA	1 cut(s)	204
SinI	GGWCC	4 cut(s)	403, 488, 510, 872
SmiMI	CAYNNNNRTG	2 cut(s)	128, 242
Sse9I	AATT	7 cut(s)	102, 165, 477, 584, 702, 774, 990
SsiI	CCGC	6 cut(s)	157, 174, 458, 801, 804, 977
SspMI	CTAG	1 cut(s)	1052
StyI	CCWWGG	1 cut(s)	958
TaaI	ACNGT	5 cut(s)	417, 445, 454, 999, 1170
TaiI	ACGT	6 cut(s)	233, 320, 329, 557, 671, 743
TaqI	TCGA	3 cut(s)	5, 204, 282
TasI	AATT	7 cut(s)	102, 165, 477, 584, 702, 774, 990
TatI	WGTACW	1 cut(s)	379
TauI	GCSGC	2 cut(s)	803, 806
TfiI	GAWTC	1 cut(s)	1030
TscAI	CASTG	3 cut(s)	282, 459, 1173
TseFI	GTSAC	3 cut(s)	448, 736, 1036
Tsp45I	GTSAC	3 cut(s)	448, 736, 1036
TspDTI	ATGAA	7 cut(s)	110, 232, 244, 700, 803, 875, 1127
TspRI	CASTG	3 cut(s)	282, 459, 1173
Tth111I	GACNNNGTC	1 cut(s)	556
VpaK11BI	GGWCC	4 cut(s)	403, 488, 510, 872
XapI	RAATTY	1 cut(s)	584
XceI	RCATGY	2 cut(s)	352, 545
XmiI	GTMKAC	1 cut(s)	153
XspI	CTAG	1 cut(s)	1052
ZraI	GACGTC	1 cut(s)	555
Zsp2I	ATGCAT	1 cut(s)	525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.