Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006721

Physical Location & Seq

Genomic Coordinates Forward (+)

5099204 .. 5101740

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G045500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGCGAAAGCTGGTTGCTTTAGCAGCTTCCTTGAGAGCTCCAAACCCTATTTTGCAATGATCTCCCTTCAATTCGGCTACGCCGGAATGAATATCATTACCAAAGTCTCTCTCAACAGAGGAATGAGCCACTATGTTCTTGTGGTTTACCGCCATGCCTTTGCCACTGCTGTTATAGCCCCCTTTGCCTTCTTTTTTGAGAGGAAGGCGCAACCCAAAATTACTCTCCCAATTTTCATGCAAATATTTGTCCTCGCTCTTCTCGGGCCGGTGATTGACCAGAACTTCTACTATGCTGGGTTGAAATATACGTCTCCGACATTCTCTTGTGCCATGAGCAACATGCTCCCGGCGATGACTTTCGTCATGGCCGTCATATGCAGGATGGAAAAGCTAGACATGAAGAAAGTGAGGTGCCAAGCAAAGGTAGTGGGAACCGTATTGACAGTGGCTGGGGCCATGTTGATGACCTTATACAAAGGCCCCATTGTAGAGATGTTGTGGTCTAAATATATTCATCCACGAAAATCTTATGTCACAGACACCACTGGAACTGGTGACAAGCACTGGTTTTTGGGCTCCGTTCTCCTCACCATTGCTACTCTTGCCTGGGCTTCTTTGTTTGTTCTACAAAACAAGGCGTTGCAGACCTACAGGAATCATCAGCTGTCTCTCACATCAATGGTGTGCTTCATTGGCACTCTGCAAGCTATTGCTGTTACCTTTGTGATGGAGCACAAACCCTCTGTCTGGAAAATTGGCTTTGACATGAACCTCCTTGCTGCTGCCTATGCTGGGATTGTCACATCAAGCATTTCATACTATGTGCAAGGGCTGGTGATGAAGACAAGAGGGCCTGTATTTGCAACTGCTTTTAGCCCTTTGATGATGATCATTGTAGCAATCATGGGCTCCTTCATCTTGGCAGAACAAATATTTCTTGGAAGTGTGCTCGGAGCCGTATTGATTGTCTTTGGCCTTTACTCAGTCCTGTGGGGAAAACACAAAGAAGGATTGGAGATTAAAGAGGAGATACCGGAGGTGATAAAAGGTTCACATGTCAACGGCGTATCGATGTCGGCCATTAATGGAGATGCTGAAACTAACAAGCTCTCCTCGGTTGCTATTTCTATGCCCATCCCAGAATCCGGCATGAAAGCCAACCCAAAGCCAAGTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

394

Amino Acids

43.12

Weight (kDa)

9.48

Isoelectric Point (pI)

31.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07050
fragaria_vesca	FvH4_1g29310 FvH4_1g29310 FvH4_7g04090 FvH4_7g04090
malus_domestica	MD02G1275400.v1.1 MD07G1043300.v1.1
prunus_persica	Prupe.2G045500_v2.0.a1 Prupe.2G045500_v2.0.a1
pyrus_communis	pycom02g23550 pycom07g03070
rosa_chinensis	RchiOBHm_Chr1g0327951 RchiOBHm_Chr3g0494821
rosa_laevigata	RLG00000022660 RLG00000029957
rosa_multiflora	Rmu_sc0000198.1_g000011 Rmu_ssc0000467.1_g000050
rosa_roxburghii	Rroxscaffold_4G00322120 Rroxscaffold_6G00390890
rosa_rugosa	Rorug01G0072500 Rorug03G0268300
rosa_samantha	Rh1BG071100 Rh1CG086600 Rh3DG351800
rosa_wichuraiana	Rw1G006880 Rw3G027680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	414
AciI	CCGC	1 cut(s)	151
AcoI	YGGCCR	2 cut(s)	369, 1080
AfiI	CCNNNNNNNGG	4 cut(s)	424, 750, 795, 1148
AflIII	ACRYGT	1 cut(s)	1057
AgsI	TTSAA	2 cut(s)	71, 304
AjnI	CCWGG	1 cut(s)	608
AluBI	AGCT	7 cut(s)	11, 27, 39, 394, 667, 710, 1111
AluI	AGCT	7 cut(s)	11, 27, 39, 394, 667, 710, 1111
Alw21I	GWGCWC	3 cut(s)	41, 738, 954
Alw26I	GTCTC	3 cut(s)	112, 318, 675
AlwNI	CAGNNNCTG	1 cut(s)	452
Ama87I	CYCGRG	1 cut(s)	263
AoxI	GGCC	7 cut(s)	266, 369, 456, 481, 854, 976, 1080
ApeKI	GCWGC	3 cut(s)	24, 782, 785
ArsI	GACNNNNNNTTYG	2 cut(s)	732, 764
AseI	ATTAAT	1 cut(s)	1086
AspLEI	GCGC	1 cut(s)	211
AspS9I	GGNCC	4 cut(s)	266, 456, 482, 854
AsuC2I	CCSGG	1 cut(s)	350
AsuHPI	GGTGA	5 cut(s)	283, 569, 583, 850, 1054
AvaI	CYCGRG	1 cut(s)	263
BanI	GGYRCC	1 cut(s)	414
BanII	GRGCYC	3 cut(s)	41, 581, 914
BbsI	GAAGAC	1 cut(s)	851
Bbv12I	GWGCWC	3 cut(s)	41, 738, 954
BbvI	GCAGC	3 cut(s)	36, 769, 772
BccI	CCATC	3 cut(s)	379, 724, 1145
BceAI	ACGGC	3 cut(s)	356, 944, 1081
BciT130I	CCWGG	1 cut(s)	610
BclI	TGATCA	1 cut(s)	891
BcnI	CCSGG	1 cut(s)	350
BcoDI	GTCTC	3 cut(s)	112, 318, 675
BfaI	CTAG	1 cut(s)	395
BfmI	CTRYAG	1 cut(s)	652
BisI	GCNGC	3 cut(s)	25, 783, 786
BlsI	GCNGC	3 cut(s)	26, 784, 787
Bme1390I	CCNGG	2 cut(s)	350, 610
BmeT110I	CYCGRG	1 cut(s)	263
BmgT120I	GGNCC	4 cut(s)	266, 456, 482, 854
BmiI	GGNNCC	7 cut(s)	416, 436, 457, 484, 580, 913, 958
BmrFI	CCNGG	2 cut(s)	350, 610
BmsI	GCATC	1 cut(s)	1084
BoxI	GACNNNNGTC	1 cut(s)	362
BpiI	GAAGAC	1 cut(s)	851
BpuEI	CTTGAG	1 cut(s)	53
BpuMI	CCSGG	1 cut(s)	350
Bsa29I	ATCGAT	1 cut(s)	1073
BsaBI	GATNNNNATC	1 cut(s)	890
BsaJI	CCNNGG	2 cut(s)	609, 1116
BsaWI	WCCGGW	1 cut(s)	1036
BsaXI	ACNNNNNCTCC	2 cut(s)	1097, 1127
Bsc4I	CCNNNNNNNGG	4 cut(s)	424, 750, 795, 1148
Bse118I	RCCGGY	1 cut(s)	268
Bse1I	ACTGG	3 cut(s)	553, 559, 572
Bse3DI	GCAATG	2 cut(s)	63, 594
Bse8I	GATNNNNATC	1 cut(s)	890
BseBI	CCWGG	1 cut(s)	610
BseCI	ATCGAT	1 cut(s)	1073
BseDI	CCNNGG	2 cut(s)	609, 1116
BseGI	GGATG	3 cut(s)	390, 517, 1137
BseJI	GATNNNNATC	1 cut(s)	890
BseLI	CCNNNNNNNGG	4 cut(s)	424, 750, 795, 1148
BseMI	GCAATG	2 cut(s)	63, 594
BseMII	CTCAG	1 cut(s)	999
BseNI	ACTGG	3 cut(s)	553, 559, 572
BseRI	GAGGAG	3 cut(s)	578, 1043, 1105
BseXI	GCAGC	3 cut(s)	36, 769, 772
BseYI	CCCAGC	3 cut(s)	296, 452, 794
BshFI	GGCC	7 cut(s)	268, 371, 458, 483, 856, 978, 1082
BshNI	GGYRCC	1 cut(s)	414
BshVI	ATCGAT	1 cut(s)	1073
BsiHKAI	GWGCWC	3 cut(s)	41, 738, 954
BsiHKCI	CYCGRG	1 cut(s)	263
BsiSI	CCGG	5 cut(s)	84, 269, 350, 1037, 1149
BslI	CCNNNNNNNGG	4 cut(s)	424, 750, 795, 1148
BsmAI	GTCTC	3 cut(s)	112, 318, 675
BsmBI	CGTCTC	1 cut(s)	318
BsnI	GGCC	7 cut(s)	268, 371, 458, 483, 856, 978, 1082
BsoBI	CYCGRG	1 cut(s)	263
Bsp1286I	GDGCHC	5 cut(s)	41, 581, 738, 914, 954
Bsp143I	GATC	2 cut(s)	60, 891
BspACI	CCGC	1 cut(s)	151
BspANI	GGCC	7 cut(s)	268, 371, 458, 483, 856, 978, 1082
BspCNI	CTCAG	1 cut(s)	998
BspDI	ATCGAT	1 cut(s)	1073
BspLI	GGNNCC	7 cut(s)	416, 436, 457, 484, 580, 913, 958
BspQI	GCTCTTC	1 cut(s)	264
BspT107I	GGYRCC	1 cut(s)	414
BsrDI	GCAATG	2 cut(s)	63, 594
BsrFI	RCCGGY	1 cut(s)	268
BsrI	ACTGG	3 cut(s)	553, 559, 572
BssAI	RCCGGY	1 cut(s)	268
BssECI	CCNNGG	2 cut(s)	609, 1116
BssMI	GATC	2 cut(s)	60, 891
Bst2UI	CCWGG	1 cut(s)	610
Bst4CI	ACNGT	2 cut(s)	439, 448
Bst6I	CTCTTC	1 cut(s)	264
BstC8I	GCNNGC	1 cut(s)	708
BstDEI	CTNAG	1 cut(s)	985
BstF5I	GGATG	3 cut(s)	390, 517, 1137
BstHHI	GCGC	1 cut(s)	211
BstKTI	GATC	2 cut(s)	63, 894
BstMAI	GTCTC	3 cut(s)	112, 318, 675
BstMBI	GATC	2 cut(s)	60, 891
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 176, 185, 605, 696, 791
BstNI	CCWGG	1 cut(s)	610
BstNSI	RCATGY	2 cut(s)	346, 1061
BstPAI	GACNNNNGTC	1 cut(s)	362
BstSCI	CCNGG	2 cut(s)	348, 608
BstSFI	CTRYAG	1 cut(s)	652
BstV1I	GCAGC	3 cut(s)	36, 769, 772
BstV2I	GAAGAC	1 cut(s)	851
Bsu15I	ATCGAT	1 cut(s)	1073
BsuRI	GGCC	7 cut(s)	268, 371, 458, 483, 856, 978, 1082
BsuTUI	ATCGAT	1 cut(s)	1073
BtgZI	GCGATG	1 cut(s)	368
BtsCI	GGATG	3 cut(s)	390, 517, 1137
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	4 cut(s)	165, 453, 546, 565
Cac8I	GCNNGC	1 cut(s)	708
CaiI	CAGNNNCTG	1 cut(s)	452
CfoI	GCGC	1 cut(s)	211
Cfr10I	RCCGGY	1 cut(s)	268
Cfr13I	GGNCC	4 cut(s)	266, 456, 482, 854
ClaI	ATCGAT	1 cut(s)	1073
CspCI	CAANNNNNGTGG	2 cut(s)	411, 446
DdeI	CTNAG	1 cut(s)	985
DpnI	GATC	2 cut(s)	62, 893
DpnII	GATC	2 cut(s)	60, 891
EaeI	YGGCCR	2 cut(s)	369, 1080
Eam1104I	CTCTTC	1 cut(s)	264
EarI	CTCTTC	1 cut(s)	264
Ecl136II	GAGCTC	1 cut(s)	39
Eco24I	GRGCYC	3 cut(s)	41, 581, 914
Eco53kI	GAGCTC	1 cut(s)	39
Eco88I	CYCGRG	1 cut(s)	263
EcoICRI	GAGCTC	1 cut(s)	39
EcoO109I	RGGNCCY	2 cut(s)	482, 854
EcoRII	CCWGG	1 cut(s)	608
EcoT38I	GRGCYC	3 cut(s)	41, 581, 914
Esp3I	CGTCTC	1 cut(s)	318
FauNDI	CATATG	1 cut(s)	377
FbaI	TGATCA	1 cut(s)	891
Fnu4HI	GCNGC	3 cut(s)	25, 783, 786
FokI	GGATG	3 cut(s)	397, 504, 1124
FriOI	GRGCYC	3 cut(s)	41, 581, 914
Fsp4HI	GCNGC	3 cut(s)	25, 783, 786
FspBI	CTAG	1 cut(s)	395
GlaI	GCGC	1 cut(s)	210
GluI	GCNGC	3 cut(s)	25, 783, 786
GsaI	CCCAGC	3 cut(s)	300, 456, 798
HaeIII	GGCC	7 cut(s)	268, 371, 458, 483, 856, 978, 1082
HapII	CCGG	5 cut(s)	84, 269, 350, 1037, 1149
HhaI	GCGC	1 cut(s)	211
Hin6I	GCGC	1 cut(s)	209
HinP1I	GCGC	1 cut(s)	209
HincII	GTYRAC	1 cut(s)	1063
HindII	GTYRAC	1 cut(s)	1063
HinfI	GANTC	2 cut(s)	658, 1145
HpaII	CCGG	5 cut(s)	84, 269, 350, 1037, 1149
HphI	GGTGA	5 cut(s)	283, 569, 583, 850, 1054
Hpy166II	GTNNAC	3 cut(s)	148, 1055, 1063
Hpy188I	TCNGA	2 cut(s)	318, 956
Hpy188III	TCNNGA	1 cut(s)	751
Hpy8I	GTNNAC	3 cut(s)	148, 1055, 1063
HpyAV	CCTTC	5 cut(s)	77, 199, 199, 925, 1004
HpyCH4III	ACNGT	2 cut(s)	439, 448
HpyCH4IV	ACGT	1 cut(s)	311
HpyCH4V	TGCA	7 cut(s)	56, 241, 381, 646, 706, 829, 866
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 176, 185, 605, 696, 791
HpyF3I	CTNAG	1 cut(s)	985
HpySE526I	ACGT	1 cut(s)	311
HspAI	GCGC	1 cut(s)	209
Ksp22I	TGATCA	1 cut(s)	891
Kzo9I	GATC	2 cut(s)	60, 891
LguI	GCTCTTC	1 cut(s)	264
LmnI	GCTCC	6 cut(s)	44, 351, 584, 733, 917, 956
Lsp1109I	GCAGC	3 cut(s)	36, 769, 772
LweI	GCATC	1 cut(s)	1084
MaeI	CTAG	1 cut(s)	395
MaeII	ACGT	1 cut(s)	311
MaeIII	GTNAC	4 cut(s)	535, 557, 718, 802
MalI	GATC	2 cut(s)	62, 893
MboI	GATC	2 cut(s)	60, 891
MboII	GAAGA	3 cut(s)	251, 415, 856
MhlI	GDGCHC	5 cut(s)	41, 581, 738, 914, 954
MluCI	AATT	4 cut(s)	71, 219, 231, 756
MmeI	TCCRAC	1 cut(s)	341
MseI	TTAA	2 cut(s)	1023, 1086
MslI	CAYNNNNRTG	2 cut(s)	464, 680
MspA1I	CMGCKG	1 cut(s)	667
MspI	CCGG	5 cut(s)	84, 269, 350, 1037, 1149
MspR9I	CCNGG	2 cut(s)	350, 610
MvaI	CCWGG	1 cut(s)	610
MwoI	GCNNNNNNNGC	6 cut(s)	24, 176, 185, 605, 696, 791
NciI	CCSGG	1 cut(s)	350
NdeI	CATATG	1 cut(s)	377
NdeII	GATC	2 cut(s)	60, 891
NlaIV	GGNNCC	7 cut(s)	416, 436, 457, 484, 580, 913, 958
NmuCI	GTSAC	3 cut(s)	535, 557, 802
NspI	RCATGY	2 cut(s)	346, 1061
PciI	ACATGT	1 cut(s)	1057
PciSI	GCTCTTC	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	1 cut(s)	369
PfeI	GAWTC	2 cut(s)	658, 1145
PkrI	GCNGC	3 cut(s)	26, 784, 787
PscI	ACATGT	1 cut(s)	1057
PshAI	GACNNNNGTC	1 cut(s)	362
PshBI	ATTAAT	1 cut(s)	1086
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	1 cut(s)	608
PspFI	CCCAGC	3 cut(s)	296, 452, 794
PspGI	CCWGG	1 cut(s)	608
PspN4I	GGNNCC	7 cut(s)	416, 436, 457, 484, 580, 913, 958
PspPI	GGNCC	4 cut(s)	266, 456, 482, 854
PstNI	CAGNNNCTG	1 cut(s)	452
PvuII	CAGCTG	1 cut(s)	667
RseI	CAYNNNNRTG	2 cut(s)	464, 680
SacI	GAGCTC	1 cut(s)	41
SapI	GCTCTTC	1 cut(s)	264
SaqAI	TTAA	2 cut(s)	1023, 1086
SatI	GCNGC	3 cut(s)	25, 783, 786
Sau3AI	GATC	2 cut(s)	60, 891
Sau96I	GGNCC	4 cut(s)	266, 456, 482, 854
ScrFI	CCNGG	2 cut(s)	350, 610
SduI	GDGCHC	5 cut(s)	41, 581, 738, 914, 954
SfaNI	GCATC	1 cut(s)	1084
SfcI	CTRYAG	1 cut(s)	652
SmiMI	CAYNNNNRTG	2 cut(s)	464, 680
SmlI	CTYRAG	1 cut(s)	32
SmoI	CTYRAG	1 cut(s)	32
Sse9I	AATT	4 cut(s)	71, 219, 231, 756
SsiI	CCGC	1 cut(s)	151
SspI	AATATT	2 cut(s)	246, 936
SspMI	CTAG	1 cut(s)	395
SstI	GAGCTC	1 cut(s)	41
StyD4I	CCNGG	2 cut(s)	348, 608
TaaI	ACNGT	2 cut(s)	439, 448
TaiI	ACGT	1 cut(s)	314
TaqI	TCGA	1 cut(s)	1073
TasI	AATT	4 cut(s)	71, 219, 231, 756
TfiI	GAWTC	2 cut(s)	658, 1145
Tru1I	TTAA	2 cut(s)	1023, 1086
Tru9I	TTAA	2 cut(s)	1023, 1086
TscAI	CASTG	4 cut(s)	172, 453, 553, 572
TseFI	GTSAC	3 cut(s)	535, 557, 802
TseI	GCWGC	3 cut(s)	24, 782, 785
Tsp45I	GTSAC	3 cut(s)	535, 557, 802
TspGWI	ACGGA	1 cut(s)	571
TspRI	CASTG	4 cut(s)	172, 453, 553, 572
VspI	ATTAAT	1 cut(s)	1086
XceI	RCATGY	2 cut(s)	346, 1061
XspI	CTAG	1 cut(s)	395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.