Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006983

Physical Location & Seq

Genomic Coordinates Forward (+)

2783168 .. 2786113

Gene Structure 2946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G08590.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1062 bp

ATGGACAAGTATGACGTTGTCAAGGATCTGGGAGCTGGAAATTTCGGTGTGGCTCGCCTTCTCAGGCACAAGGACACCAAAGAGCTTGTTGCCATGAAATACATCGAGAGAGGTCGCAAGATAGATGAGAACGTGGCGAGAGAGATTATTAATCACAGATCACTTAAACATCCTAATATCATCCGGTTCAAGGAGGTGATCCTGACACCTACTCATCTTGCTATTGTGATGGAGTATGCTTCTGGAGGAGAGCTCTTTGATCGAATCTGTACTGCCGGTAGATTTAGTGAAGCTGAGGCTAGGTACTTCTTTCAACAGCTGATTTGTGGTGTTGATTACTGCCATTCCTTGCAAATATGTCATAGAGACCTGAAGCTTGAGAACACACTGCTCGATGGGAGCCCTGCTCCGCTTTTGAAAATCTGTGATTTTGGTTACTCTAAGTCATCTATACTACATTCTAGGCCTAAATCAACTGTTGGAACTCCAGCTTACATAGCACCTGAAGTTCTTTCACGGAGAGAATATGATGGCAAGCACGCGGATGTGTGGTCATGTGGAGTAACCCTTTATGTGATGCTGGTGGGAGCTTACCCGTTTGAGGACCCTAATGATCCAAAAAACTTCAGGAAAACAATCCAGCGCATAATGGCTGTACAATACAAGATCCCGGACTATGTTCACATATCTCAGGAATGCAAACATCTTCTCTCTCGCATATTCGTCACTAACTCTGCTAAGAGAATCACACTTAAGGAGATCAAGAATCATCCGTGGTACTTGAAGAATTTGCCAAAGGAGCTGCTAGAGTCGGCTCAAGCGGCGTATTACAAGAGAGACACAAGCTTCTCTCTTCAAAGCGTAGAGGACATAATGAAGATAGTTGGAGAAGCAAGGAATCCAGCTCCATCAACTAGTGCTGTCAAAAGCTCGGGCTCAGGAGCTGATGAAGAAGAGGAAGAGGACGTTGAAGCTGAAGTGGAAGAGGAAGAAGATGATGAAGACGAATACGAGAAGCATGTCAAAGAGGCACAGTCTTGTCAAGAGTCTGACAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Pkinase

Protein Analysis

353

Amino Acids

40.2

Weight (kDa)

5.72

Isoelectric Point (pI)

47.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	1 - 183	1.5e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	1 - 180	2.5e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10940 AT1G10940 AT1G60940 AT1G60940 AT5G08590 AT5G08590 AT5G63650
fragaria_vesca	FvH4_5g28850 FvH4_5g28850 FvH4_5g28850 FvH4_5g28850 FvH4_5g28850
malus_domestica	MD08G1236500.v1.1 MD15G1428500.v1.1
prunus_persica	Prupe.1G573300_v2.0.a1 Prupe.1G573300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0221191
rosa_laevigata	RLG00000002171
rosa_multiflora	Rmu_sc0000324.1_g000005
rosa_roxburghii	Rroxscaffold_3G00238620
rosa_rugosa	Rorug07G0201000
rosa_samantha	Rh7BG331000 Rh7CG357900 Rh7DG338600
rosa_wichuraiana	Rw7G028930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	542
AciI	CCGC	3 cut(s)	410, 542, 821
AclWI	GGATC	4 cut(s)	33, 193, 608, 661
AcsI	RAATTY	2 cut(s)	40, 787
AcuI	CTGAAG	4 cut(s)	392, 525, 610, 996
AfaI	GTAC	4 cut(s)	271, 305, 657, 779
AfiI	CCNNNNNNNGG	2 cut(s)	190, 601
AflII	CTTAAG	1 cut(s)	752
AgsI	TTSAA	6 cut(s)	190, 314, 418, 784, 857, 971
AhlI	ACTAGT	1 cut(s)	914
Alw21I	GWGCWC	1 cut(s)	255
Alw26I	GTCTC	2 cut(s)	360, 831
AlwI	GGATC	4 cut(s)	33, 193, 608, 661
AlwNI	CAGNNNCTG	1 cut(s)	944
Ama87I	CYCGRG	1 cut(s)	931
AoxI	GGCC	1 cut(s)	464
ApeKI	GCWGC	1 cut(s)	802
ApoI	RAATTY	2 cut(s)	40, 787
AseI	ATTAAT	1 cut(s)	150
AspLEI	GCGC	1 cut(s)	645
AspS9I	GGNCC	1 cut(s)	604
AsuC2I	CCSGG	1 cut(s)	671
AsuHPI	GGTGA	1 cut(s)	208
AvaI	CYCGRG	1 cut(s)	931
AvaII	GGWCC	1 cut(s)	604
BanII	GRGCYC	3 cut(s)	255, 404, 938
BbsI	GAAGAC	1 cut(s)	1008
Bbv12I	GWGCWC	1 cut(s)	255
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	1 cut(s)	789
BccI	CCATC	4 cut(s)	223, 389, 524, 916
BcnI	CCSGG	1 cut(s)	671
BcoDI	GTCTC	2 cut(s)	360, 831
BcuI	ACTAGT	1 cut(s)	914
BfaI	CTAG	4 cut(s)	300, 462, 806, 915
BfrI	CTTAAG	1 cut(s)	752
BisI	GCNGC	2 cut(s)	803, 822
BlsI	GCNGC	2 cut(s)	804, 823
Bme1390I	CCNGG	1 cut(s)	671
Bme18I	GGWCC	1 cut(s)	604
BmeT110I	CYCGRG	1 cut(s)	931
BmgT120I	GGNCC	1 cut(s)	604
BmiI	GGNNCC	2 cut(s)	401, 606
BmrFI	CCNGG	1 cut(s)	671
BmsI	GCATC	1 cut(s)	567
BpiI	GAAGAC	1 cut(s)	1008
BplI	GAGNNNNNCTC	4 cut(s)	237, 269, 391, 423
BpmI	CTGGAG	2 cut(s)	264, 471
Bpu10I	CCTNAGC	2 cut(s)	294, 937
BpuEI	CTTGAG	2 cut(s)	398, 801
BpuMI	CCSGG	1 cut(s)	671
BsaI	GGTCTC	1 cut(s)	360
BsaJI	CCNNGG	1 cut(s)	773
BsaWI	WCCGGW	1 cut(s)	183
Bsc4I	CCNNNNNNNGG	2 cut(s)	190, 601
Bse118I	RCCGGY	1 cut(s)	275
BseDI	CCNNGG	1 cut(s)	773
BseGI	GGATG	4 cut(s)	169, 180, 550, 769
BseLI	CCNNNNNNNGG	2 cut(s)	190, 601
BseMII	CTCAG	4 cut(s)	76, 285, 704, 951
BseRI	GAGGAG	1 cut(s)	261
BseXI	GCAGC	1 cut(s)	789
Bsh1236I	CGCG	1 cut(s)	542
BshFI	GGCC	1 cut(s)	466
BsiHKAI	GWGCWC	1 cut(s)	255
BsiHKCI	CYCGRG	1 cut(s)	931
BsiSI	CCGG	3 cut(s)	184, 276, 671
BslI	CCNNNNNNNGG	2 cut(s)	190, 601
BsmAI	GTCTC	2 cut(s)	360, 831
BsmI	GAATGC	1 cut(s)	701
BsnI	GGCC	1 cut(s)	466
Bso31I	GGTCTC	1 cut(s)	360
BsoBI	CYCGRG	1 cut(s)	931
Bsp1286I	GDGCHC	3 cut(s)	255, 404, 938
Bsp1407I	TGTACA	1 cut(s)	655
Bsp143I	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
BspACI	CCGC	3 cut(s)	410, 542, 821
BspANI	GGCC	1 cut(s)	466
BspCNI	CTCAG	4 cut(s)	75, 286, 703, 950
BspFNI	CGCG	1 cut(s)	542
BspLI	GGNNCC	2 cut(s)	401, 606
BspPI	GGATC	4 cut(s)	33, 193, 608, 661
BspTI	CTTAAG	1 cut(s)	752
BspTNI	GGTCTC	1 cut(s)	360
BsrFI	RCCGGY	1 cut(s)	275
BsrGI	TGTACA	1 cut(s)	655
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	1 cut(s)	773
BssMI	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
Bst4CI	ACNGT	2 cut(s)	478, 1035
Bst6I	CTCTTC	4 cut(s)	858, 948, 954, 978
BstAFI	CTTAAG	1 cut(s)	752
BstAUI	TGTACA	1 cut(s)	655
BstC8I	GCNNGC	3 cut(s)	55, 536, 540
BstDEI	CTNAG	6 cut(s)	62, 294, 441, 690, 738, 937
BstDSI	CCRYGG	1 cut(s)	773
BstF5I	GGATG	4 cut(s)	169, 180, 550, 769
BstFNI	CGCG	1 cut(s)	542
BstHHI	GCGC	1 cut(s)	645
BstKTI	GATC	7 cut(s)	28, 161, 201, 262, 616, 669, 762
BstMAI	GTCTC	2 cut(s)	360, 831
BstMBI	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
BstMWI	GCNNNNNNNGC	3 cut(s)	497, 799, 821
BstNSI	RCATGY	1 cut(s)	1022
BstSCI	CCNGG	1 cut(s)	669
BstUI	CGCG	1 cut(s)	542
BstV1I	GCAGC	1 cut(s)	789
BstV2I	GAAGAC	1 cut(s)	1008
BstX2I	RGATCY	2 cut(s)	25, 666
BstYI	RGATCY	2 cut(s)	25, 666
BsuRI	GGCC	1 cut(s)	466
BtgI	CCRYGG	1 cut(s)	773
BtsCI	GGATG	4 cut(s)	169, 180, 550, 769
BtsI	GCAGTG	1 cut(s)	386
BtsIMutI	CAGTG	1 cut(s)	386
Cac8I	GCNNGC	3 cut(s)	55, 536, 540
CaiI	CAGNNNCTG	1 cut(s)	944
CfoI	GCGC	1 cut(s)	645
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	1 cut(s)	604
Csp6I	GTAC	4 cut(s)	270, 304, 656, 778
CviAII	CATG	3 cut(s)	94, 555, 1019
CviQI	GTAC	4 cut(s)	270, 304, 656, 778
DdeI	CTNAG	6 cut(s)	62, 294, 441, 690, 738, 937
DpnI	GATC	7 cut(s)	27, 160, 200, 261, 615, 668, 761
DpnII	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
Eam1104I	CTCTTC	4 cut(s)	858, 948, 954, 978
EarI	CTCTTC	4 cut(s)	858, 948, 954, 978
Ecl136II	GAGCTC	1 cut(s)	253
Eco147I	AGGCCT	1 cut(s)	466
Eco24I	GRGCYC	3 cut(s)	255, 404, 938
Eco31I	GGTCTC	1 cut(s)	360
Eco47I	GGWCC	1 cut(s)	604
Eco53kI	GAGCTC	1 cut(s)	253
Eco57I	CTGAAG	4 cut(s)	392, 525, 610, 996
Eco88I	CYCGRG	1 cut(s)	931
EcoICRI	GAGCTC	1 cut(s)	253
EcoO109I	RGGNCCY	1 cut(s)	604
EcoT38I	GRGCYC	3 cut(s)	255, 404, 938
FaeI	CATG	3 cut(s)	97, 558, 1022
FatI	CATG	3 cut(s)	93, 554, 1018
Fnu4HI	GCNGC	2 cut(s)	803, 822
FokI	GGATG	4 cut(s)	156, 167, 557, 756
FriOI	GRGCYC	3 cut(s)	255, 404, 938
Fsp4HI	GCNGC	2 cut(s)	803, 822
FspBI	CTAG	4 cut(s)	300, 462, 806, 915
GlaI	GCGC	1 cut(s)	644
GluI	GCNGC	2 cut(s)	803, 822
GsuI	CTGGAG	2 cut(s)	264, 471
HaeIII	GGCC	1 cut(s)	466
HapII	CCGG	3 cut(s)	184, 276, 671
HhaI	GCGC	1 cut(s)	645
Hin1II	CATG	3 cut(s)	97, 558, 1022
Hin6I	GCGC	1 cut(s)	643
HinP1I	GCGC	1 cut(s)	643
HindIII	AAGCTT	3 cut(s)	374, 844, 1056
HinfI	GANTC	6 cut(s)	264, 744, 766, 809, 898, 1046
HpaII	CCGG	3 cut(s)	184, 276, 671
HphI	GGTGA	1 cut(s)	208
Hpy166II	GTNNAC	1 cut(s)	682
Hpy188I	TCNGA	1 cut(s)	1051
Hpy188III	TCNNGA	8 cut(s)	106, 202, 243, 628, 692, 763, 939, 1043
Hpy8I	GTNNAC	1 cut(s)	682
HpyAV	CCTTC	1 cut(s)	68
HpyCH4III	ACNGT	2 cut(s)	478, 1035
HpyCH4IV	ACGT	3 cut(s)	15, 132, 966
HpyCH4V	TGCA	2 cut(s)	352, 699
HpyF10VI	GCNNNNNNNGC	3 cut(s)	497, 799, 821
HpyF3I	CTNAG	6 cut(s)	62, 294, 441, 690, 738, 937
HpySE526I	ACGT	3 cut(s)	15, 132, 966
Hsp92II	CATG	3 cut(s)	97, 558, 1022
HspAI	GCGC	1 cut(s)	643
Kzo9I	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
LmnI	GCTCC	7 cut(s)	32, 399, 412, 587, 799, 910, 941
Lsp1109I	GCAGC	1 cut(s)	789
LweI	GCATC	1 cut(s)	567
MaeI	CTAG	4 cut(s)	300, 462, 806, 915
MaeII	ACGT	3 cut(s)	15, 132, 966
MaeIII	GTNAC	3 cut(s)	434, 562, 724
MalI	GATC	7 cut(s)	27, 160, 200, 261, 615, 668, 761
MboI	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
MflI	RGATCY	2 cut(s)	25, 666
MhlI	GDGCHC	3 cut(s)	255, 404, 938
MluCI	AATT	2 cut(s)	40, 787
MlyI	GAGTC	2 cut(s)	818, 1055
MmeI	TCCRAC	2 cut(s)	460, 865
MseI	TTAA	4 cut(s)	150, 165, 753, 1060
MslI	CAYNNNNRTG	1 cut(s)	543
MspA1I	CMGCKG	1 cut(s)	319
MspCI	CTTAAG	1 cut(s)	752
MspI	CCGG	3 cut(s)	184, 276, 671
MspR9I	CCNGG	1 cut(s)	671
Mva1269I	GAATGC	1 cut(s)	701
MvnI	CGCG	1 cut(s)	542
MwoI	GCNNNNNNNGC	3 cut(s)	497, 799, 821
NciI	CCSGG	1 cut(s)	671
NdeII	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
NlaIII	CATG	3 cut(s)	97, 558, 1022
NlaIV	GGNNCC	2 cut(s)	401, 606
NmuCI	GTSAC	1 cut(s)	724
NspI	RCATGY	1 cut(s)	1022
PceI	AGGCCT	1 cut(s)	466
PctI	GAATGC	1 cut(s)	701
PfeI	GAWTC	4 cut(s)	264, 744, 766, 898
PflFI	GACNNNGTC	1 cut(s)	17
PfoI	TCCNGGA	1 cut(s)	669
PkrI	GCNGC	2 cut(s)	804, 823
PleI	GAGTC	2 cut(s)	817, 1054
PpsI	GAGTC	2 cut(s)	817, 1054
PpuMI	RGGWCCY	1 cut(s)	604
PshBI	ATTAAT	1 cut(s)	150
Psp124BI	GAGCTC	1 cut(s)	255
Psp5II	RGGWCCY	1 cut(s)	604
PspN4I	GGNNCC	2 cut(s)	401, 606
PspPI	GGNCC	1 cut(s)	604
PspPPI	RGGWCCY	1 cut(s)	604
PstNI	CAGNNNCTG	1 cut(s)	944
PsuI	RGATCY	2 cut(s)	25, 666
PsyI	GACNNNGTC	1 cut(s)	17
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	4 cut(s)	271, 305, 657, 779
RsaNI	GTAC	4 cut(s)	270, 304, 656, 778
RseI	CAYNNNNRTG	1 cut(s)	543
SacI	GAGCTC	1 cut(s)	255
SaqAI	TTAA	4 cut(s)	150, 165, 753, 1060
SatI	GCNGC	2 cut(s)	803, 822
Sau3AI	GATC	7 cut(s)	25, 158, 198, 259, 613, 666, 759
Sau96I	GGNCC	1 cut(s)	604
SchI	GAGTC	2 cut(s)	818, 1055
ScrFI	CCNGG	1 cut(s)	671
SduI	GDGCHC	3 cut(s)	255, 404, 938
SfaNI	GCATC	1 cut(s)	567
SinI	GGWCC	1 cut(s)	604
SmiMI	CAYNNNNRTG	1 cut(s)	543
SmlI	CTYRAG	3 cut(s)	377, 752, 816
SmoI	CTYRAG	3 cut(s)	377, 752, 816
SpeI	ACTAGT	1 cut(s)	914
Sse9I	AATT	2 cut(s)	40, 787
SseBI	AGGCCT	1 cut(s)	466
SsiI	CCGC	3 cut(s)	410, 542, 821
SspMI	CTAG	4 cut(s)	300, 462, 806, 915
SstI	GAGCTC	1 cut(s)	255
StuI	AGGCCT	1 cut(s)	466
StyD4I	CCNGG	1 cut(s)	669
TaaI	ACNGT	2 cut(s)	478, 1035
TaiI	ACGT	3 cut(s)	18, 135, 969
TaqI	TCGA	3 cut(s)	105, 262, 393
TasI	AATT	2 cut(s)	40, 787
TatI	WGTACW	2 cut(s)	269, 655
TauI	GCSGC	1 cut(s)	824
TfiI	GAWTC	4 cut(s)	264, 744, 766, 898
Tru1I	TTAA	4 cut(s)	150, 165, 753, 1060
Tru9I	TTAA	4 cut(s)	150, 165, 753, 1060
TscAI	CASTG	1 cut(s)	393
TseFI	GTSAC	1 cut(s)	724
TseI	GCWGC	1 cut(s)	802
Tsp45I	GTSAC	1 cut(s)	724
TspDTI	ATGAA	4 cut(s)	110, 890, 963, 1014
TspGWI	ACGGA	2 cut(s)	532, 762
TspRI	CASTG	1 cut(s)	393
Tth111I	GACNNNGTC	1 cut(s)	17
Vha464I	CTTAAG	1 cut(s)	752
VpaK11BI	GGWCC	1 cut(s)	604
VspI	ATTAAT	1 cut(s)	150
XapI	RAATTY	2 cut(s)	40, 787
XceI	RCATGY	1 cut(s)	1022
XspI	CTAG	4 cut(s)	300, 462, 806, 915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.