Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006983

Physical Location & Seq

Genomic Coordinates Reverse (-)

25481334 .. 25483799

Gene Structure 2466 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G63650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGACAAGTATGAGGTTGTGAAGGATTTGGGAGCTGGAAATTTTGGTGTGGCTCGTCTTCTTAGACACAAAGAGACCAAAGAGCTCGTTGCTATGAAATACATTGAGAGAGGTCGCAAGATTGATGAGAATGTGGCAAGAGAGATTATCAATCATAGATCACTTAGGCATCCTAATATCATCAGATTCAAGGAGGTGATTCTGACTCCAACTCATCTTGCAATTGTAATGGAGTATGCTTCTGGAGGAGAGCTCTTTGAAAGAATCTGTAATGCTGGTAGATTCAGTGAAGCTGAGGCTAGATACTTCTTTCAGCAGCTGATTTGTGGCGTGGATTACTGTCATTCACTGCAAATATGTCATAGAGATTTGAAGCTTGAGAATACACTGCTTGATGGTAGTCCAGCCCCGCTTTTGAAAATCTGTGATTTTGGTTACTCCAAGTCATCTCTGCTTCACTCTAGACCTAAATCAACTGTTGGTACTCCAGCTTATATCGCACCTGAAGTTCTTTCCCGAAGAGAATATGACGGAAAGCATGCGGATGTTTGGTCCTGTGGTGTGACTCTTTATGTGATGTTAGTTGGAGGTTATCCGTTTGAAGACCCGGATGATCCGAGAAACTTCAGGAAAACAATCCAACGTATAATGGCTGTCCAGTACAAGATCCCGGATTACGTTCATATATCGCAGGAGTGCAGACACCTTCTCTCTCGCATATTTGTCACTAATTCAGCTAAGAGAATCACACTTAAAGAGATCAAGAAGCATCCATGGTACTTAAAGAACTTGCCAAAGGAGCTTACAGAGCCTGCTCAAGCGGCGTACTACAAGAGAGAAACCCCAAGCTTTTCCCTCCAAAGCGTAGAGGACATAATGAAGATCGTTGGAGAAGCCAGGAATCCAGCTCCGTCTTCTAATGCCGTCAAGGGCTTTGATGATGATGAGGAAGATGTGGAGGACGAGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAGGAAGAGGAAGAAGATGAATACGAGAAGCATGTTAAAGAGGCCCATTCTTGTCAAGAGCCTCCCAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Pkinase

Protein Analysis

360

Amino Acids

41.55

Weight (kDa)

5.19

Isoelectric Point (pI)

58.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 259	1.3e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 256	8.6e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10940 AT1G10940 AT1G60940 AT1G60940 AT5G08590 AT5G08590 AT5G63650
fragaria_vesca	FvH4_5g28850 FvH4_5g28850 FvH4_5g28850 FvH4_5g28850 FvH4_5g28850
malus_domestica	MD08G1236500.v1.1 MD15G1428500.v1.1
prunus_persica	Prupe.1G573300_v2.0.a1 Prupe.1G573300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0221191
rosa_laevigata	RLG00000002171
rosa_multiflora	Rmu_sc0000324.1_g000005
rosa_roxburghii	Rroxscaffold_3G00238620
rosa_rugosa	Rorug07G0201000
rosa_samantha	Rh7BG331000 Rh7CG357900 Rh7DG338600
rosa_wichuraiana	Rw7G028930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	410, 542, 821
AclWI	GGATC	2 cut(s)	608, 661
AcsI	RAATTY	1 cut(s)	40
AcuI	CTGAAG	2 cut(s)	525, 610
AfaI	GTAC	4 cut(s)	484, 662, 779, 827
AgsI	TTSAA	6 cut(s)	190, 260, 373, 418, 602, 971
AjnI	CCWGG	1 cut(s)	896
Alw21I	GWGCWC	2 cut(s)	87, 255
Alw26I	GTCTC	1 cut(s)	68
AlwI	GGATC	2 cut(s)	608, 661
AlwNI	CAGNNNCTG	2 cut(s)	319, 812
AoxI	GGCC	1 cut(s)	1050
ApeKI	GCWGC	1 cut(s)	316
ApoI	RAATTY	1 cut(s)	40
AspS9I	GGNCC	2 cut(s)	552, 1051
AsuC2I	CCSGG	2 cut(s)	608, 671
AsuHPI	GGTGA	1 cut(s)	208
AvaII	GGWCC	1 cut(s)	552
BanII	GRGCYC	2 cut(s)	87, 255
BbsI	GAAGAC	3 cut(s)	50, 609, 906
Bbv12I	GWGCWC	2 cut(s)	87, 255
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	1 cut(s)	328
BccI	CCATC	1 cut(s)	389
BceAI	ACGGC	1 cut(s)	908
BciT130I	CCWGG	1 cut(s)	898
BcnI	CCSGG	2 cut(s)	608, 671
BcoDI	GTCTC	1 cut(s)	68
BfaI	CTAG	2 cut(s)	300, 462
BisI	GCNGC	2 cut(s)	317, 822
BlsI	GCNGC	2 cut(s)	318, 823
Bme1390I	CCNGG	3 cut(s)	608, 671, 898
Bme18I	GGWCC	1 cut(s)	552
BmgT120I	GGNCC	2 cut(s)	552, 1051
BmrFI	CCNGG	3 cut(s)	608, 671, 898
BmsI	GCATC	2 cut(s)	178, 778
BpiI	GAAGAC	3 cut(s)	50, 609, 906
BplI	GAGNNNNNCTC	2 cut(s)	237, 269
BpmI	CTGGAG	2 cut(s)	264, 471
Bpu10I	CCTNAGC	1 cut(s)	294
BpuEI	CTTGAG	2 cut(s)	398, 801
BpuMI	CCSGG	2 cut(s)	608, 671
BsaI	GGTCTC	1 cut(s)	68
BsaJI	CCNNGG	1 cut(s)	773
Bse1I	ACTGG	1 cut(s)	658
BseBI	CCWGG	1 cut(s)	898
BseDI	CCNNGG	1 cut(s)	773
BseGI	GGATG	4 cut(s)	169, 550, 616, 769
BseMII	CTCAG	1 cut(s)	285
BseNI	ACTGG	1 cut(s)	658
BseRI	GAGGAG	2 cut(s)	261, 1013
BseXI	GCAGC	1 cut(s)	328
BsgI	GTGCAG	1 cut(s)	718
BshFI	GGCC	1 cut(s)	1052
BsiHKAI	GWGCWC	2 cut(s)	87, 255
BsiSI	CCGG	2 cut(s)	608, 671
BsmAI	GTCTC	1 cut(s)	68
BsnI	GGCC	1 cut(s)	1052
Bso31I	GGTCTC	1 cut(s)	68
Bsp1286I	GDGCHC	2 cut(s)	87, 255
Bsp143I	GATC	5 cut(s)	158, 613, 666, 759, 882
Bsp19I	CCATGG	1 cut(s)	773
BspACI	CCGC	3 cut(s)	410, 542, 821
BspANI	GGCC	1 cut(s)	1052
BspCNI	CTCAG	1 cut(s)	286
BspPI	GGATC	2 cut(s)	608, 661
BspTNI	GGTCTC	1 cut(s)	68
BsrI	ACTGG	1 cut(s)	658
BssECI	CCNNGG	1 cut(s)	773
BssMI	GATC	5 cut(s)	158, 613, 666, 759, 882
BssT1I	CCWWGG	1 cut(s)	773
Bst2UI	CCWGG	1 cut(s)	898
Bst4CI	ACNGT	2 cut(s)	341, 478
Bst6I	CTCTTC	4 cut(s)	514, 990, 1002, 1008
BstC8I	GCNNGC	2 cut(s)	540, 813
BstDEI	CTNAG	4 cut(s)	62, 164, 294, 738
BstDSI	CCRYGG	1 cut(s)	773
BstF5I	GGATG	4 cut(s)	169, 550, 616, 769
BstKTI	GATC	5 cut(s)	161, 616, 669, 762, 885
BstMAI	GTCTC	1 cut(s)	68
BstMBI	GATC	5 cut(s)	158, 613, 666, 759, 882
BstMWI	GCNNNNNNNGC	4 cut(s)	497, 799, 808, 821
BstNI	CCWGG	1 cut(s)	898
BstNSI	RCATGY	2 cut(s)	542, 1043
BstSCI	CCNGG	3 cut(s)	606, 669, 896
BstV1I	GCAGC	1 cut(s)	328
BstV2I	GAAGAC	3 cut(s)	50, 609, 906
BstX2I	RGATCY	1 cut(s)	666
BstYI	RGATCY	1 cut(s)	666
BsuRI	GGCC	1 cut(s)	1052
BtgI	CCRYGG	1 cut(s)	773
BtsCI	GGATG	4 cut(s)	169, 550, 616, 769
BtsI	GCAGTG	2 cut(s)	347, 386
BtsIMutI	CAGTG	3 cut(s)	292, 347, 386
Cac8I	GCNNGC	2 cut(s)	540, 813
CaiI	CAGNNNCTG	2 cut(s)	319, 812
Cfr13I	GGNCC	2 cut(s)	552, 1051
Csp6I	GTAC	4 cut(s)	483, 661, 778, 826
CviAII	CATG	3 cut(s)	539, 774, 1040
CviQI	GTAC	4 cut(s)	483, 661, 778, 826
DdeI	CTNAG	4 cut(s)	62, 164, 294, 738
DpnI	GATC	5 cut(s)	160, 615, 668, 761, 884
DpnII	GATC	5 cut(s)	158, 613, 666, 759, 882
Eam1104I	CTCTTC	4 cut(s)	514, 990, 1002, 1008
EarI	CTCTTC	4 cut(s)	514, 990, 1002, 1008
Ecl136II	GAGCTC	2 cut(s)	85, 253
Eco130I	CCWWGG	1 cut(s)	773
Eco24I	GRGCYC	2 cut(s)	87, 255
Eco31I	GGTCTC	1 cut(s)	68
Eco47I	GGWCC	1 cut(s)	552
Eco53kI	GAGCTC	2 cut(s)	85, 253
Eco57I	CTGAAG	2 cut(s)	525, 610
EcoICRI	GAGCTC	2 cut(s)	85, 253
EcoRII	CCWGG	1 cut(s)	896
EcoT14I	CCWWGG	1 cut(s)	773
EcoT38I	GRGCYC	2 cut(s)	87, 255
ErhI	CCWWGG	1 cut(s)	773
FaeI	CATG	3 cut(s)	542, 777, 1043
FatI	CATG	3 cut(s)	538, 773, 1039
FauI	CCCGC	1 cut(s)	417
Fnu4HI	GCNGC	2 cut(s)	317, 822
FokI	GGATG	4 cut(s)	156, 557, 623, 756
FriOI	GRGCYC	2 cut(s)	87, 255
Fsp4HI	GCNGC	2 cut(s)	317, 822
FspBI	CTAG	2 cut(s)	300, 462
GluI	GCNGC	2 cut(s)	317, 822
GsuI	CTGGAG	2 cut(s)	264, 471
HaeIII	GGCC	1 cut(s)	1052
HapII	CCGG	2 cut(s)	608, 671
Hin1II	CATG	3 cut(s)	542, 777, 1043
HindIII	AAGCTT	3 cut(s)	374, 847, 1077
HinfI	GANTC	8 cut(s)	186, 199, 205, 264, 282, 565, 744, 901
HpaII	CCGG	2 cut(s)	608, 671
HphI	GGTGA	1 cut(s)	208
Hpy188I	TCNGA	3 cut(s)	185, 204, 618
Hpy188III	TCNNGA	6 cut(s)	243, 462, 516, 628, 763, 1064
HpyAV	CCTTC	2 cut(s)	16, 716
HpyCH4III	ACNGT	2 cut(s)	341, 478
HpyCH4IV	ACGT	2 cut(s)	643, 678
HpyCH4V	TGCA	3 cut(s)	221, 352, 699
HpyF10VI	GCNNNNNNNGC	4 cut(s)	497, 799, 808, 821
HpyF3I	CTNAG	4 cut(s)	62, 164, 294, 738
HpySE526I	ACGT	2 cut(s)	643, 678
Hsp92II	CATG	3 cut(s)	542, 777, 1043
Kzo9I	GATC	5 cut(s)	158, 613, 666, 759, 882
LmnI	GCTCC	3 cut(s)	32, 799, 913
Lsp1109I	GCAGC	1 cut(s)	328
LweI	GCATC	2 cut(s)	178, 778
MaeI	CTAG	2 cut(s)	300, 462
MaeII	ACGT	2 cut(s)	643, 678
MaeIII	GTNAC	3 cut(s)	434, 562, 724
MalI	GATC	5 cut(s)	160, 615, 668, 761, 884
MboI	GATC	5 cut(s)	158, 613, 666, 759, 882
MfeI	CAATTG	1 cut(s)	222
MflI	RGATCY	1 cut(s)	666
MhlI	GDGCHC	2 cut(s)	87, 255
MluCI	AATT	3 cut(s)	40, 222, 730
MlyI	GAGTC	2 cut(s)	199, 559
MmeI	TCCRAC	4 cut(s)	233, 565, 664, 868
MseI	TTAA	4 cut(s)	753, 782, 1044, 1081
MslI	CAYNNNNRTG	1 cut(s)	543
MspA1I	CMGCKG	1 cut(s)	319
MspI	CCGG	2 cut(s)	608, 671
MspR9I	CCNGG	3 cut(s)	608, 671, 898
MunI	CAATTG	1 cut(s)	222
MvaI	CCWGG	1 cut(s)	898
MwoI	GCNNNNNNNGC	4 cut(s)	497, 799, 808, 821
NciI	CCSGG	2 cut(s)	608, 671
NcoI	CCATGG	1 cut(s)	773
NdeII	GATC	5 cut(s)	158, 613, 666, 759, 882
NlaIII	CATG	3 cut(s)	542, 777, 1043
NmuCI	GTSAC	2 cut(s)	562, 724
NspI	RCATGY	2 cut(s)	542, 1043
PaeI	GCATGC	1 cut(s)	542
PfeI	GAWTC	6 cut(s)	186, 199, 264, 282, 744, 901
PfoI	TCCNGGA	1 cut(s)	669
PkrI	GCNGC	2 cut(s)	318, 823
PleI	GAGTC	2 cut(s)	199, 559
PpsI	GAGTC	2 cut(s)	199, 559
Psp124BI	GAGCTC	2 cut(s)	87, 255
Psp6I	CCWGG	1 cut(s)	896
PspGI	CCWGG	1 cut(s)	896
PspPI	GGNCC	2 cut(s)	552, 1051
PstNI	CAGNNNCTG	2 cut(s)	319, 812
PsuI	RGATCY	1 cut(s)	666
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	4 cut(s)	484, 662, 779, 827
RsaNI	GTAC	4 cut(s)	483, 661, 778, 826
RseI	CAYNNNNRTG	1 cut(s)	543
SacI	GAGCTC	2 cut(s)	87, 255
SaqAI	TTAA	4 cut(s)	753, 782, 1044, 1081
SatI	GCNGC	2 cut(s)	317, 822
Sau3AI	GATC	5 cut(s)	158, 613, 666, 759, 882
Sau96I	GGNCC	2 cut(s)	552, 1051
SchI	GAGTC	2 cut(s)	199, 559
ScrFI	CCNGG	3 cut(s)	608, 671, 898
SduI	GDGCHC	2 cut(s)	87, 255
SfaNI	GCATC	2 cut(s)	178, 778
SinI	GGWCC	1 cut(s)	552
SmiMI	CAYNNNNRTG	1 cut(s)	543
SmlI	CTYRAG	2 cut(s)	377, 816
SmoI	CTYRAG	2 cut(s)	377, 816
SphI	GCATGC	1 cut(s)	542
Sse9I	AATT	3 cut(s)	40, 222, 730
SsiI	CCGC	3 cut(s)	410, 542, 821
SspMI	CTAG	2 cut(s)	300, 462
SstI	GAGCTC	2 cut(s)	87, 255
StyD4I	CCNGG	3 cut(s)	606, 669, 896
StyI	CCWWGG	1 cut(s)	773
TaaI	ACNGT	2 cut(s)	341, 478
TaiI	ACGT	2 cut(s)	646, 681
TasI	AATT	3 cut(s)	40, 222, 730
TatI	WGTACW	1 cut(s)	660
TauI	GCSGC	1 cut(s)	824
TfiI	GAWTC	6 cut(s)	186, 199, 264, 282, 744, 901
Tru1I	TTAA	4 cut(s)	753, 782, 1044, 1081
Tru9I	TTAA	4 cut(s)	753, 782, 1044, 1081
TscAI	CASTG	3 cut(s)	292, 354, 393
TseFI	GTSAC	2 cut(s)	562, 724
TseI	GCWGC	1 cut(s)	316
Tsp45I	GTSAC	2 cut(s)	562, 724
TspDTI	ATGAA	4 cut(s)	110, 671, 893, 1041
TspGWI	ACGGA	3 cut(s)	546, 585, 900
TspRI	CASTG	3 cut(s)	292, 354, 393
VpaK11BI	GGWCC	1 cut(s)	552
XapI	RAATTY	1 cut(s)	40
XbaI	TCTAGA	1 cut(s)	461
XceI	RCATGY	2 cut(s)	542, 1043
XspI	CTAG	2 cut(s)	300, 462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.