No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11870 AT5G11870 |
| fragaria_vesca | FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 FvH4_2g31810 |
| malus_domestica | MD08G1062700.v1.1 MD15G1059000.v1.1 |
| prunus_persica | Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 Prupe.1G411500_v2.0.a1 |
| pyrus_communis | pycom15g05540 |
| rosa_chinensis | RchiOBHm_Chr6g0311011 |
| rosa_laevigata | RLG00000010443 |
| rosa_multiflora | Rmu_sc0012235.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00158110 |
| rosa_rugosa | Rorug06G0384800 Rorug06G0384800 Rorug06G0384800 |
| rosa_samantha | Rh6BG509000 Rh6CG514900 Rh6DG501500 |
| rosa_wichuraiana | Rw6G043410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 431 |
| AciI | CCGC | 3 cut(s) | 431, 572, 626 |
| AclWI | GGATC | 1 cut(s) | 70 |
| AcsI | RAATTY | 1 cut(s) | 48 |
| AfaI | GTAC | 1 cut(s) | 632 |
| AgsI | TTSAA | 3 cut(s) | 178, 253, 650 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 35, 67 |
| AluBI | AGCT | 2 cut(s) | 246, 312 |
| AluI | AGCT | 2 cut(s) | 246, 312 |
| Alw26I | GTCTC | 1 cut(s) | 488 |
| AlwI | GGATC | 1 cut(s) | 70 |
| ApoI | RAATTY | 1 cut(s) | 48 |
| AsuHPI | GGTGA | 2 cut(s) | 281, 568 |
| BccI | CCATC | 3 cut(s) | 27, 135, 276 |
| BceAI | ACGGC | 1 cut(s) | 713 |
| BcoDI | GTCTC | 1 cut(s) | 488 |
| BfaI | CTAG | 2 cut(s) | 411, 603 |
| BglII | AGATCT | 1 cut(s) | 273 |
| BisI | GCNGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 1 cut(s) | 628 |
| BpmI | CTGGAG | 1 cut(s) | 731 |
| Bsa29I | ATCGAT | 1 cut(s) | 685 |
| BsaJI | CCNNGG | 1 cut(s) | 729 |
| BsaWI | WCCGGW | 1 cut(s) | 519 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 704, 734 |
| Bse1I | ACTGG | 2 cut(s) | 538, 714 |
| Bse3DI | GCAATG | 1 cut(s) | 303 |
| BseCI | ATCGAT | 1 cut(s) | 685 |
| BseDI | CCNNGG | 1 cut(s) | 729 |
| BseGI | GGATG | 1 cut(s) | 287 |
| BseMI | GCAATG | 1 cut(s) | 303 |
| BseMII | CTCAG | 1 cut(s) | 499 |
| BseNI | ACTGG | 2 cut(s) | 538, 714 |
| BshVI | ATCGAT | 1 cut(s) | 685 |
| BsiSI | CCGG | 1 cut(s) | 520 |
| BslFI | GGGAC | 2 cut(s) | 383, 459 |
| BsmAI | GTCTC | 1 cut(s) | 488 |
| BsmFI | GGGAC | 2 cut(s) | 383, 459 |
| BsmI | GAATGC | 2 cut(s) | 703, 771 |
| Bsp143I | GATC | 3 cut(s) | 62, 273, 514 |
| BspACI | CCGC | 3 cut(s) | 431, 572, 626 |
| BspCNI | CTCAG | 1 cut(s) | 498 |
| BspDI | ATCGAT | 1 cut(s) | 685 |
| BspPI | GGATC | 1 cut(s) | 70 |
| BsrBI | CCGCTC | 1 cut(s) | 431 |
| BsrDI | GCAATG | 1 cut(s) | 303 |
| BsrI | ACTGG | 2 cut(s) | 538, 714 |
| BssECI | CCNNGG | 1 cut(s) | 729 |
| BssMI | GATC | 3 cut(s) | 62, 273, 514 |
| Bst4CI | ACNGT | 2 cut(s) | 291, 549 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 2 cut(s) | 301, 310 |
| BstDEI | CTNAG | 2 cut(s) | 449, 485 |
| BstDSI | CCRYGG | 1 cut(s) | 729 |
| BstF5I | GGATG | 1 cut(s) | 287 |
| BstKTI | GATC | 3 cut(s) | 65, 276, 517 |
| BstMAI | GTCTC | 1 cut(s) | 488 |
| BstMBI | GATC | 3 cut(s) | 62, 273, 514 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 305, 309, 314, 626 |
| BstX2I | RGATCY | 1 cut(s) | 273 |
| BstYI | RGATCY | 1 cut(s) | 273 |
| Bsu15I | ATCGAT | 1 cut(s) | 685 |
| BsuTUI | ATCGAT | 1 cut(s) | 685 |
| BtgI | CCRYGG | 1 cut(s) | 729 |
| BtsCI | GGATG | 1 cut(s) | 287 |
| BtsIMutI | CAGTG | 4 cut(s) | 287, 493, 703, 707 |
| Cac8I | GCNNGC | 2 cut(s) | 301, 310 |
| ClaI | ATCGAT | 1 cut(s) | 685 |
| Csp6I | GTAC | 1 cut(s) | 631 |
| CviAII | CATG | 5 cut(s) | 88, 157, 480, 529, 568 |
| CviJI | RGCY | 5 cut(s) | 246, 312, 317, 613, 734 |
| CviKI_1 | RGCY | 5 cut(s) | 246, 312, 317, 613, 734 |
| CviQI | GTAC | 1 cut(s) | 631 |
| DdeI | CTNAG | 2 cut(s) | 449, 485 |
| DpnI | GATC | 3 cut(s) | 64, 275, 516 |
| DpnII | GATC | 3 cut(s) | 62, 273, 514 |
| DraI | TTTAAA | 1 cut(s) | 264 |
| EcoT22I | ATGCAT | 1 cut(s) | 530 |
| FaeI | CATG | 5 cut(s) | 91, 160, 483, 532, 571 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 301, 333, 432, 464 |
| FaqI | GGGAC | 2 cut(s) | 383, 459 |
| FatI | CATG | 5 cut(s) | 87, 156, 479, 528, 567 |
| FauI | CCCGC | 1 cut(s) | 424 |
| Fnu4HI | GCNGC | 1 cut(s) | 627 |
| FokI | GGATG | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 1 cut(s) | 627 |
| FspBI | CTAG | 2 cut(s) | 411, 603 |
| GluI | GCNGC | 1 cut(s) | 627 |
| GsuI | CTGGAG | 1 cut(s) | 731 |
| HapII | CCGG | 1 cut(s) | 520 |
| Hin1II | CATG | 5 cut(s) | 91, 160, 483, 532, 571 |
| HincII | GTYRAC | 1 cut(s) | 12 |
| HindII | GTYRAC | 1 cut(s) | 12 |
| HindIII | AAGCTT | 2 cut(s) | 244, 310 |
| HinfI | GANTC | 5 cut(s) | 16, 116, 360, 559, 606 |
| HpaII | CCGG | 1 cut(s) | 520 |
| HphI | GGTGA | 2 cut(s) | 281, 568 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 633 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 603 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 633 |
| Hpy99I | CGWCG | 1 cut(s) | 403 |
| HpyAV | CCTTC | 1 cut(s) | 644 |
| HpyCH4III | ACNGT | 2 cut(s) | 291, 549 |
| HpyCH4IV | ACGT | 1 cut(s) | 533 |
| HpyCH4V | TGCA | 5 cut(s) | 234, 308, 528, 659, 680 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 305, 309, 314, 626 |
| HpyF3I | CTNAG | 2 cut(s) | 449, 485 |
| HpySE526I | ACGT | 1 cut(s) | 533 |
| Hsp92II | CATG | 5 cut(s) | 91, 160, 483, 532, 571 |
| Kzo9I | GATC | 3 cut(s) | 62, 273, 514 |
| LmnI | GCTCC | 1 cut(s) | 712 |
| MaeI | CTAG | 2 cut(s) | 411, 603 |
| MaeII | ACGT | 1 cut(s) | 533 |
| MaeIII | GTNAC | 1 cut(s) | 579 |
| MalI | GATC | 3 cut(s) | 64, 275, 516 |
| MbiI | CCGCTC | 1 cut(s) | 431 |
| MboI | GATC | 3 cut(s) | 62, 273, 514 |
| MboII | GAAGA | 2 cut(s) | 127, 241 |
| MflI | RGATCY | 1 cut(s) | 273 |
| MluCI | AATT | 2 cut(s) | 48, 151 |
| MmeI | TCCRAC | 1 cut(s) | 190 |
| MnlI | CCTC | 5 cut(s) | 80, 120, 233, 467, 594 |
| Mph1103I | ATGCAT | 1 cut(s) | 530 |
| MseI | TTAA | 3 cut(s) | 263, 510, 780 |
| MslI | CAYNNNNRTG | 1 cut(s) | 161 |
| MspA1I | CMGCKG | 1 cut(s) | 626 |
| MspI | CCGG | 1 cut(s) | 520 |
| Mva1269I | GAATGC | 2 cut(s) | 703, 771 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 305, 309, 314, 626 |
| NdeII | GATC | 3 cut(s) | 62, 273, 514 |
| NlaIII | CATG | 5 cut(s) | 91, 160, 483, 532, 571 |
| NsiI | ATGCAT | 1 cut(s) | 530 |
| PctI | GAATGC | 2 cut(s) | 703, 771 |
| PfeI | GAWTC | 5 cut(s) | 16, 116, 360, 559, 606 |
| PkrI | GCNGC | 1 cut(s) | 628 |
| PsuI | RGATCY | 1 cut(s) | 273 |
| RsaI | GTAC | 1 cut(s) | 632 |
| RsaNI | GTAC | 1 cut(s) | 631 |
| RseI | CAYNNNNRTG | 1 cut(s) | 161 |
| SaqAI | TTAA | 3 cut(s) | 263, 510, 780 |
| SatI | GCNGC | 1 cut(s) | 627 |
| Sau3AI | GATC | 3 cut(s) | 62, 273, 514 |
| SetI | ASST | 6 cut(s) | 248, 314, 349, 536, 586, 788 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 161 |
| Sse9I | AATT | 2 cut(s) | 48, 151 |
| SsiI | CCGC | 3 cut(s) | 431, 572, 626 |
| SspMI | CTAG | 2 cut(s) | 411, 603 |
| TaaI | ACNGT | 2 cut(s) | 291, 549 |
| TaiI | ACGT | 1 cut(s) | 536 |
| TaqI | TCGA | 2 cut(s) | 114, 685 |
| TasI | AATT | 2 cut(s) | 48, 151 |
| TauI | GCSGC | 1 cut(s) | 629 |
| TfiI | GAWTC | 5 cut(s) | 16, 116, 360, 559, 606 |
| Tru1I | TTAA | 3 cut(s) | 263, 510, 780 |
| Tru9I | TTAA | 3 cut(s) | 263, 510, 780 |
| TscAI | CASTG | 4 cut(s) | 294, 493, 703, 714 |
| TspDTI | ATGAA | 3 cut(s) | 82, 108, 145 |
| TspRI | CASTG | 4 cut(s) | 294, 493, 703, 714 |
| XapI | RAATTY | 1 cut(s) | 48 |
| XbaI | TCTAGA | 1 cut(s) | 602 |
| XspI | CTAG | 2 cut(s) | 411, 603 |
| Zsp2I | ATGCAT | 1 cut(s) | 530 |