AT5G12960

Beta-L-arabinofuranosidase, GH127

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
4097693 .. 4101766
4074 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G12960.1

Sequence Viewer

Length: 2598 bp
ATGAAAAAACATACGATGAAGTCTGGTGTGATCATAACCATTGCTCTGTTATTATACACAAGCTTTCTTCTTGTTTGTCTGGCGAAAGAGTGTACAGACATTCCTACGAAGCTCTCATCGCATACTCTCCGCAGCGAGCTTCTGCAATCACAGAACGCAAATTTGAAGTCAGAGGAGTTCTCTCATTACCATTTAACTCCAACTGATGACTCTGCTTGGTCTACTTTGTTGCCAAGGAAGATGTTGAAAGAAGAGACTGATGATTTTGCTTGGACTATGTTGTATAGAAAGTTCAAGGACTCTAATTCCTCTGGTAACTTTCTCAAGGATGTCTCTTTGCACGACGTTAGGCTGGACCCGAGCTCTTTCCATTGGAGGGCTCAGCAGACAAACCTTGAGTATCTATTGATGTTGGATGTTGATGGTTTGGCCTATAACTTCCGTAAAGAAGCTGGTCTTAATGCTCCTGGAGTTCCCTATGGAGGATGGGAGAAACCAGATAGTGAACTCCGTGGCCATTTTGTCGGTCACTATTTGAGTGCAACAGCTTATATGTGGGCAAGTACTCATAACGAAACTCTCAAGGCGAAAATGACAGCTCTTGTCTCAGCTCTAGCGGAATGCCAGCAGAAATATGGCACAGGATATCTCTCAGCTTTCCCTTCCAGTTTTTTCGACCGGTTTGAAGCTATAACACATGTTTGGGCTCCTTACTATACCATTCACAAGATTTTGGCCGGCCTGGTGGATCAATACAAGTTGGCTGGGAATACTCAAGCTTTAAAGATGGCAACAGGGATGGCTGATTACTTTTATGGCCGTGTTCAAAATGTGATAAAGAAGTACAGTGTTGAACGACATTGGCTATCACTAAACGAAGAGACTGGTGGCATGAATGATGTTCTTTATCAGCTATACAGCATCACTAGAGATTCCAAGTATTTGTTTCTCGCACATCTCTTTGACAAGCCTTGCTTTCTCGGAGTCCTCGCAATTCAGGCCGATGATATTAGTGGATTCCACGCTAATACACATATTCCCATCGTCGTTGGATCCCAACAACGGTATGAAATCACTGGTGATCTACTCCATAAGGAAATCCCGATGTTCTTTATGGACATAGTTAATGCTTCACACAGCTATGCAACTGGAGGAACATCAGTCAAAGAGTTCTGGCAAGATCCAAAGAGAATGGCGACTACGTTGCAAACTGAAAACGAGGAATCATGTACTACTTATAACATGCTCAAGGTCTCTAGGAATCTGTTCAGATGGACAAAAGAGGTTAGCTATGCAGACTATTACGAGCGCGCTTTGACCAACGGTGTGCTCGGAATTCAAAGAGGAACCGATCCCGGACGGATGATCTACATGCTCCCATTGGGTAAAGGTGTTTCTAAGGCTGTGACTTATCACGGTTGGGGAACACCTTATGATTCCTTTTGGTGTTGCTATGGCACTGGAATTGAATCCTTCTCAAAACTGGGAGATTCCATATATTTTCAAGAAGATGGTGCAACTCCAGCTCTTTATGTCACCCAATATATATCAAGCTCACTTGATTGGAAATCTGCTGGTCTTTCAATATCTCAGAAAGTTAATCCTGTTGTGTCGTGGGATCCGTACATGCGTGTGACATTCACTCTTTCTTCTTCCAAAGTGGGAGTGGCGAAGGAGTCGACTTTGAATCTAAGAATTCCTGTTTGGACTAACTCTATAGGTGCCAAAGTATCTTTGAATGGGCGACCCTTAAACGTACCAACTTCAGGTAATTTCCTATCAATCAAACAGAAATGGAAATCTGGTGATCAAGTAACCATGGAGCTACCAATGAGTATCAGAACCGAAGCTATAAAAGATGATCGGCCGGAGTACGCATCTCTTCAAGCCATACTCTATGGCCCTTACTTGTTAGCCGGACACACGAGCATGGACTGGAGCATCACAACTCAGGCTAAAGCTGGAAACTGGATAACCCCTATACCTGAAACTCTTAACAGTCACCTTGTCACACTCTCACAACAATCTGGAAACATATCTTACGTGTTGTCAAACAGCAACCAAACCATCATAATGAAAGTATCACCCGAGCCAGGGACACAAGACGCTGTTTCGGCGACTTTCAGGCTCGTGACTGATGATTCTAAACATCCGATTTCGAGTCCAGAGGGACTAATTGGAAGCCTTGTCATGCTTGAGCCGTTTGATTTCCCTGGCATGATCGTAAAGCAAGCAACTGATAGCTCCCTCACGGTTCAAGCTTCTTCTCCTAGTGACAAAGGATCTTCTAGCTTTCGGTTAGTATCTGGACTTGACGGGAAGCCAGGAAGCGTGTCGTTAAGCCTAGAGAGCAAAAAGGGTTGTTTTGTGTACAGCGATCAAACATTAAAGCAAGGGACGAAACTAAGGCTTGAATGTGGTTCGGCTGCGACTGATGAGAAGTTTAAACAGGCAGCAAGCTTTAGTTTAAAGACAGGAATGAATCAATACAATCCAATGAGTTTCGTGATGAGCGGAACACAGAGGAACTTTGTGCTATCGCCATTGTTTAGCCTAAGAGATGAAACATACAATGTGTACTTCAGTGTGCAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

865

Amino Acids

96.52

Weight (kDa)

7.06

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-AFase-like_GH127_cat PF07944 115 - 497 1.8e-126 Beta-L-arabinofuranosidase, GH127 catalytic domain
Glyco_hydro127M PF20736 510 - 611 2.9e-22 Beta-L-arabinofuranosidase, GH127 middle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1239
AccB1I GGYRCC 1 cut(s) 1721
AccBSI CCGCTC 1 cut(s) 2514
AccI GTMKAC 2 cut(s) 221, 1679
AccII CGCG 1 cut(s) 1311
AciI CCGC 3 cut(s) 130, 617, 2514
AclWI GGATC 8 cut(s) 756, 1047, 1060, 1175, 1346, 1613, 1626, 2290
AcoI YGGCCR 4 cut(s) 514, 735, 817, 1865
AcsI RAATTY 3 cut(s) 160, 1335, 1695
AcuI CTGAAG 2 cut(s) 1749, 2566
AfaI GTAC 9 cut(s) 94, 565, 845, 1231, 1625, 1758, 1874, 2372, 2579
AfiI CCNNNNNNNGG 6 cut(s) 376, 482, 1062, 1766, 2093, 2094
AflIII ACRYGT 2 cut(s) 697, 2043
AgeI ACCGGT 1 cut(s) 678
AjnI CCWGG 5 cut(s) 466, 741, 2092, 2212, 2323
AjuI GAANNNNNNNTTGG 2 cut(s) 1687, 1719
Alw21I GWGCWC 2 cut(s) 365, 1332
Alw26I GTCTC 5 cut(s) 248, 337, 610, 875, 1258
AlwI GGATC 8 cut(s) 756, 1047, 1060, 1175, 1346, 1613, 1626, 2290
Ama87I CYCGRG 2 cut(s) 358, 2087
AoxI GGCC 8 cut(s) 429, 514, 735, 739, 817, 999, 1865, 1900
ApeKI GCWGC 3 cut(s) 132, 2426, 2453
ApoI RAATTY 3 cut(s) 160, 1335, 1695
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
AsiGI ACCGGT 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 1265
AspLEI GCGC 2 cut(s) 1311, 1313
AspS9I GGNCC 2 cut(s) 355, 1901
AsuC2I CCSGG 1 cut(s) 1356
AsuHPI GGTGA 5 cut(s) 1091, 1528, 1817, 1994, 2076
AvaI CYCGRG 2 cut(s) 358, 2087
AvaII GGWCC 1 cut(s) 355
BalI TGGCCA 1 cut(s) 516
BamHI GGATCC 2 cut(s) 1052, 1618
BanI GGYRCC 1 cut(s) 1721
BanII GRGCYC 3 cut(s) 365, 382, 709
BauI CACGAG 2 cut(s) 1924, 2129
Bbv12I GWGCWC 2 cut(s) 365, 1332
BbvI GCAGC 3 cut(s) 144, 2413, 2465
BccI CCATC 8 cut(s) 416, 480, 781, 793, 1049, 1266, 1505, 2075
BceAI ACGGC 2 cut(s) 804, 2185
BcgI CGANNNNNNTGC 2 cut(s) 1186, 1220
BciT130I CCWGG 5 cut(s) 468, 743, 2094, 2214, 2325
BclI TGATCA 2 cut(s) 30, 1807
BcnI CCSGG 1 cut(s) 1356
BcoDI GTCTC 5 cut(s) 248, 337, 610, 875, 1258
BfaI CTAG 6 cut(s) 614, 927, 1257, 2271, 2289, 2345
BfmI CTRYAG 1 cut(s) 1716
BisI GCNGC 3 cut(s) 133, 2427, 2454
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 3 cut(s) 134, 2428, 2455
BmcAI AGTACT 1 cut(s) 565
Bme1390I CCNGG 6 cut(s) 468, 743, 1356, 2094, 2214, 2325
Bme18I GGWCC 1 cut(s) 355
BmeT110I CYCGRG 2 cut(s) 358, 2087
BmgT120I GGNCC 2 cut(s) 355, 1901
BmiI GGNNCC 6 cut(s) 357, 708, 1054, 1348, 1620, 1723
BmrFI CCNGG 6 cut(s) 468, 743, 1356, 2094, 2214, 2325
BmrI ACTGGG 1 cut(s) 1493
BmsI GCATC 3 cut(s) 930, 1886, 1950
BmuI ACTGGG 1 cut(s) 1493
BplI GAGNNNNNCTC 2 cut(s) 164, 196
BpmI CTGGAG 4 cut(s) 489, 1170, 1506, 1957
Bpu1102I GCTNAGC 1 cut(s) 381
BpuEI CTTGAG 6 cut(s) 308, 416, 566, 759, 1232, 2216
BpuMI CCSGG 1 cut(s) 1356
BsaAI YACGTR 1 cut(s) 2044
BsaI GGTCTC 1 cut(s) 1258
BsaJI CCNNGG 5 cut(s) 233, 511, 1818, 2093, 2212
BsaWI WCCGGW 1 cut(s) 678
Bsc4I CCNNNNNNNGG 6 cut(s) 376, 482, 1062, 1766, 2093, 2094
Bse118I RCCGGY 2 cut(s) 678, 737
Bse1I ACTGG 8 cut(s) 666, 889, 1081, 1153, 1465, 1488, 1940, 1973
Bse3DI GCAATG 1 cut(s) 39
BseBI CCWGG 5 cut(s) 468, 743, 2094, 2214, 2325
BseDI CCNNGG 5 cut(s) 233, 511, 1818, 2093, 2212
BseGI GGATG 6 cut(s) 334, 421, 491, 804, 1368, 2149
BseLI CCNNNNNNNGG 6 cut(s) 376, 482, 1062, 1766, 2093, 2094
BseMI GCAATG 1 cut(s) 39
BseMII CTCAG 5 cut(s) 395, 621, 666, 1604, 1964
BseNI ACTGG 8 cut(s) 666, 889, 1081, 1153, 1465, 1488, 1940, 1973
BsePI GCGCGC 1 cut(s) 1309
BseRI GAGGAG 1 cut(s) 188
BseX3I CGGCCG 1 cut(s) 1865
BseXI GCAGC 3 cut(s) 144, 2413, 2465
BseYI CCCAGC 1 cut(s) 764
Bsh1236I CGCG 1 cut(s) 1311
Bsh1285I CGRYCG 2 cut(s) 679, 1868
BshFI GGCC 8 cut(s) 431, 516, 737, 741, 819, 1001, 1867, 1902
BshNI GGYRCC 1 cut(s) 1721
BshTI ACCGGT 1 cut(s) 678
BsiEI CGRYCG 2 cut(s) 679, 1868
BsiHKAI GWGCWC 2 cut(s) 365, 1332
BsiHKCI CYCGRG 2 cut(s) 358, 2087
BsiSI CCGG 5 cut(s) 679, 738, 1356, 1868, 1917
BslFI GGGAC 3 cut(s) 2110, 2184, 2410
BslI CCNNNNNNNGG 6 cut(s) 376, 482, 1062, 1766, 2093, 2094
BsmAI GTCTC 5 cut(s) 248, 337, 610, 875, 1258
BsmFI GGGAC 3 cut(s) 2110, 2184, 2410
BsmI GAATGC 1 cut(s) 626
BsnI GGCC 8 cut(s) 431, 516, 737, 741, 819, 1001, 1867, 1902
Bso31I GGTCTC 1 cut(s) 1258
BsoBI CYCGRG 2 cut(s) 358, 2087
Bsp1286I GDGCHC 4 cut(s) 365, 382, 709, 1332
Bsp1407I TGTACA 2 cut(s) 92, 2370
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 1 cut(s) 1818
BspACI CCGC 3 cut(s) 130, 617, 2514
BspANI GGCC 8 cut(s) 431, 516, 737, 741, 819, 1001, 1867, 1902
BspCNI CTCAG 5 cut(s) 394, 620, 665, 1603, 1963
BspFNI CGCG 1 cut(s) 1311
BspLI GGNNCC 6 cut(s) 357, 708, 1054, 1348, 1620, 1723
BspPI GGATC 8 cut(s) 756, 1047, 1060, 1175, 1346, 1613, 1626, 2290
BspT107I GGYRCC 1 cut(s) 1721
BspTNI GGTCTC 1 cut(s) 1258
BsrBI CCGCTC 1 cut(s) 2514
BsrDI GCAATG 1 cut(s) 39
BsrFI RCCGGY 2 cut(s) 678, 737
BsrGI TGTACA 2 cut(s) 92, 2370
BsrI ACTGG 8 cut(s) 666, 889, 1081, 1153, 1465, 1488, 1940, 1973
BssAI RCCGGY 2 cut(s) 678, 737
BssECI CCNNGG 5 cut(s) 233, 511, 1818, 2093, 2212
BssHII GCGCGC 1 cut(s) 1309
BssSI CACGAG 2 cut(s) 1924, 2129
BssT1I CCWWGG 2 cut(s) 233, 1818
Bst2BI CACGAG 2 cut(s) 1924, 2129
Bst2UI CCWGG 5 cut(s) 468, 743, 2094, 2214, 2325
Bst4CI ACNGT 6 cut(s) 848, 1065, 1325, 1418, 2000, 2254
Bst6I CTCTTC 3 cut(s) 246, 873, 1887
BstAUI TGTACA 2 cut(s) 92, 2370
BstBAI YACGTR 1 cut(s) 2044
BstC8I GCNNGC 7 cut(s) 137, 626, 739, 1311, 2232, 2458, 2592
BstDEI CTNAG 9 cut(s) 381, 607, 652, 1398, 1590, 1691, 1950, 2405, 2555
BstDSI CCRYGG 2 cut(s) 511, 1818
BstF5I GGATG 6 cut(s) 334, 421, 491, 804, 1368, 2149
BstFNI CGCG 1 cut(s) 1311
BstHHI GCGC 2 cut(s) 1311, 1313
BstMAI GTCTC 5 cut(s) 248, 337, 610, 875, 1258
BstMCI CGRYCG 2 cut(s) 679, 1868
BstMWI GCNNNNNNNGC 5 cut(s) 118, 998, 1523, 2114, 2349
BstNI CCWGG 5 cut(s) 468, 743, 2094, 2214, 2325
BstNSI RCATGY 4 cut(s) 701, 1246, 1375, 1630
BstSCI CCNGG 6 cut(s) 466, 741, 1354, 2092, 2212, 2323
BstSFI CTRYAG 1 cut(s) 1716
BstUI CGCG 1 cut(s) 1311
BstV1I GCAGC 3 cut(s) 144, 2413, 2465
BstX2I RGATCY 4 cut(s) 1052, 1180, 1618, 2282
BstYI RGATCY 4 cut(s) 1052, 1180, 1618, 2282
BstZI CGGCCG 1 cut(s) 1865
BsuRI GGCC 8 cut(s) 431, 516, 737, 741, 819, 1001, 1867, 1902
BtgI CCRYGG 2 cut(s) 511, 1818
BtgZI GCGATG 1 cut(s) 102
BtsCI GGATG 6 cut(s) 334, 421, 491, 804, 1368, 2149
BtsIMutI CAGTG 4 cut(s) 853, 1074, 1458, 2590
Cac8I GCNNGC 7 cut(s) 137, 626, 739, 1311, 2232, 2458, 2592
CfoI GCGC 2 cut(s) 1311, 1313
Cfr10I RCCGGY 2 cut(s) 678, 737
Cfr13I GGNCC 2 cut(s) 355, 1901
CseI GACGC 1 cut(s) 2114
Csp6I GTAC 9 cut(s) 93, 564, 844, 1230, 1624, 1757, 1873, 2371, 2578
CspAI ACCGGT 1 cut(s) 678
CviQI GTAC 9 cut(s) 93, 564, 844, 1230, 1624, 1757, 1873, 2371, 2578
DdeI CTNAG 9 cut(s) 381, 607, 652, 1398, 1590, 1691, 1950, 2405, 2555
DraI TTTAAA 3 cut(s) 783, 2446, 2469
EaeI YGGCCR 4 cut(s) 514, 735, 817, 1865
EagI CGGCCG 1 cut(s) 1865
Eam1104I CTCTTC 3 cut(s) 246, 873, 1887
EarI CTCTTC 3 cut(s) 246, 873, 1887
Ecl136II GAGCTC 1 cut(s) 363
EclXI CGGCCG 1 cut(s) 1865
Eco130I CCWWGG 2 cut(s) 233, 1818
Eco24I GRGCYC 3 cut(s) 365, 382, 709
Eco31I GGTCTC 1 cut(s) 1258
Eco32I GATATC 1 cut(s) 647
Eco47I GGWCC 1 cut(s) 355
Eco52I CGGCCG 1 cut(s) 1865
Eco53kI GAGCTC 1 cut(s) 363
Eco57I CTGAAG 2 cut(s) 1749, 2566
Eco88I CYCGRG 2 cut(s) 358, 2087
EcoICRI GAGCTC 1 cut(s) 363
EcoRI GAATTC 2 cut(s) 1335, 1695
EcoRII CCWGG 5 cut(s) 466, 741, 2092, 2212, 2323
EcoRV GATATC 1 cut(s) 647
EcoT14I CCWWGG 2 cut(s) 233, 1818
EcoT38I GRGCYC 3 cut(s) 365, 382, 709
ErhI CCWWGG 2 cut(s) 233, 1818
FalI AAGNNNNNCTT 4 cut(s) 441, 473, 959, 991
FaqI GGGAC 3 cut(s) 2110, 2184, 2410
FbaI TGATCA 2 cut(s) 30, 1807
FblI GTMKAC 2 cut(s) 221, 1679
Fnu4HI GCNGC 3 cut(s) 133, 2427, 2454
FokI GGATG 6 cut(s) 341, 428, 498, 811, 1375, 2136
FriOI GRGCYC 3 cut(s) 365, 382, 709
FseI GGCCGGCC 1 cut(s) 741
Fsp4HI GCNGC 3 cut(s) 133, 2427, 2454
FspBI CTAG 6 cut(s) 614, 927, 1257, 2271, 2289, 2345
GlaI GCGC 2 cut(s) 1310, 1312
GluI GCNGC 3 cut(s) 133, 2427, 2454
GsaI CCCAGC 1 cut(s) 768
GsuI CTGGAG 4 cut(s) 489, 1170, 1506, 1957
HaeIII GGCC 8 cut(s) 431, 516, 737, 741, 819, 1001, 1867, 1902
HapII CCGG 5 cut(s) 679, 738, 1356, 1868, 1917
HgaI GACGC 1 cut(s) 2114
HhaI GCGC 2 cut(s) 1311, 1313
Hin6I GCGC 2 cut(s) 1309, 1311
HinP1I GCGC 2 cut(s) 1309, 1311
HincII GTYRAC 1 cut(s) 1680
HindII GTYRAC 1 cut(s) 1680
HindIII AAGCTT 5 cut(s) 61, 777, 2259, 2458, 2592
HpaII CCGG 5 cut(s) 679, 738, 1356, 1868, 1917
HphI GGTGA 5 cut(s) 1091, 1528, 1817, 1994, 2076
Hpy166II GTNNAC 6 cut(s) 93, 222, 506, 1680, 2371, 2578
Hpy188I TCNGA 7 cut(s) 172, 983, 1271, 1334, 1593, 1841, 2154
Hpy188III TCNNGA 7 cut(s) 1102, 1505, 2028, 2131, 2165, 2307, 2506
Hpy8I GTNNAC 6 cut(s) 93, 222, 506, 1680, 2371, 2578
Hpy99I CGWCG 2 cut(s) 347, 1049
HpyAV CCTTC 3 cut(s) 672, 1483, 1666
HpyCH4III ACNGT 6 cut(s) 848, 1065, 1325, 1418, 2000, 2254
HpyCH4IV ACGT 4 cut(s) 345, 1202, 1755, 2043
HpyCH4V TGCA 8 cut(s) 145, 340, 542, 1145, 1207, 1295, 1517, 2590
HpyF10VI GCNNNNNNNGC 5 cut(s) 118, 998, 1523, 2114, 2349
HpyF3I CTNAG 9 cut(s) 381, 607, 652, 1398, 1590, 1691, 1950, 2405, 2555
HpySE526I ACGT 4 cut(s) 345, 1202, 1755, 2043
HspAI GCGC 2 cut(s) 1309, 1311
KroI GCCGGC 1 cut(s) 737
KroNI GCCGGC 1 cut(s) 739
Ksp22I TGATCA 2 cut(s) 30, 1807
LmnI GCTCC 6 cut(s) 469, 712, 1380, 1822, 1938, 2249
Lsp1109I GCAGC 3 cut(s) 144, 2413, 2465
LweI GCATC 3 cut(s) 930, 1886, 1950
MaeI CTAG 6 cut(s) 614, 927, 1257, 2271, 2289, 2345
MaeII ACGT 4 cut(s) 345, 1202, 1755, 2043
MbiI CCGCTC 1 cut(s) 2514
MflI RGATCY 4 cut(s) 1052, 1180, 1618, 2282
MhlI GDGCHC 4 cut(s) 365, 382, 709, 1332
MlsI TGGCCA 1 cut(s) 516
MluCI AATT 8 cut(s) 160, 304, 993, 1335, 1464, 1695, 1771, 2175
MluNI TGGCCA 1 cut(s) 516
MlyI GAGTC 5 cut(s) 203, 293, 993, 1685, 2170
MmeI TCCRAC 3 cut(s) 224, 393, 1030
Mox20I TGGCCA 1 cut(s) 516
MroNI GCCGGC 1 cut(s) 737
MroXI GAANNNNTTC 1 cut(s) 1265
MscI TGGCCA 1 cut(s) 516
MslI CAYNNNNRTG 4 cut(s) 1140, 1631, 1928, 2072
Msp20I TGGCCA 1 cut(s) 516
MspI CCGG 5 cut(s) 679, 738, 1356, 1868, 1917
MspR9I CCNGG 6 cut(s) 468, 743, 1356, 2094, 2214, 2325
MssI GTTTAAAC 1 cut(s) 2446
Mva1269I GAATGC 1 cut(s) 626
MvaI CCWGG 5 cut(s) 468, 743, 2094, 2214, 2325
MvnI CGCG 1 cut(s) 1311
MwoI GCNNNNNNNGC 5 cut(s) 118, 998, 1523, 2114, 2349
NaeI GCCGGC 1 cut(s) 739
NciI CCSGG 1 cut(s) 1356
NcoI CCATGG 1 cut(s) 1818
NgoMIV GCCGGC 1 cut(s) 737
NlaIV GGNNCC 6 cut(s) 357, 708, 1054, 1348, 1620, 1723
NmuCI GTSAC 8 cut(s) 527, 1405, 1534, 1633, 2000, 2008, 2131, 2273
NspI RCATGY 4 cut(s) 701, 1246, 1375, 1630
PauI GCGCGC 1 cut(s) 1309
PciI ACATGT 1 cut(s) 697
PcsI WCGNNNNNNNCGW 1 cut(s) 1619
PctI GAATGC 1 cut(s) 626
PdiI GCCGGC 1 cut(s) 739
PdmI GAANNNNTTC 1 cut(s) 1265
PfoI TCCNGGA 2 cut(s) 466, 1354
PinAI ACCGGT 1 cut(s) 678
PkrI GCNGC 3 cut(s) 134, 2428, 2455
PleI GAGTC 5 cut(s) 203, 293, 992, 1684, 2169
PmeI GTTTAAAC 1 cut(s) 2446
PpsI GAGTC 5 cut(s) 203, 293, 992, 1684, 2169
Ppu21I YACGTR 1 cut(s) 2044
PscI ACATGT 1 cut(s) 697
PsiI TTATAA 1 cut(s) 1239
Psp124BI GAGCTC 1 cut(s) 365
Psp6I CCWGG 5 cut(s) 466, 741, 2092, 2212, 2323
PspFI CCCAGC 1 cut(s) 764
PspGI CCWGG 5 cut(s) 466, 741, 2092, 2212, 2323
PspN4I GGNNCC 6 cut(s) 357, 708, 1054, 1348, 1620, 1723
PspPI GGNCC 2 cut(s) 355, 1901
PsrI GAACNNNNNNTAC 2 cut(s) 275, 307
PsuI RGATCY 4 cut(s) 1052, 1180, 1618, 2282
PteI GCGCGC 1 cut(s) 1309
RigI GGCCGGCC 1 cut(s) 741
RsaI GTAC 9 cut(s) 94, 565, 845, 1231, 1625, 1758, 1874, 2372, 2579
RsaNI GTAC 9 cut(s) 93, 564, 844, 1230, 1624, 1757, 1873, 2371, 2578
RseI CAYNNNNRTG 4 cut(s) 1140, 1631, 1928, 2072
SacI GAGCTC 1 cut(s) 365
SalI GTCGAC 1 cut(s) 1678
SatI GCNGC 3 cut(s) 133, 2427, 2454
Sau96I GGNCC 2 cut(s) 355, 1901
ScaI AGTACT 1 cut(s) 565
SchI GAGTC 5 cut(s) 203, 293, 993, 1685, 2170
ScrFI CCNGG 6 cut(s) 468, 743, 1356, 2094, 2214, 2325
SduI GDGCHC 4 cut(s) 365, 382, 709, 1332
SfaNI GCATC 3 cut(s) 930, 1886, 1950
SfcI CTRYAG 1 cut(s) 1716
SinI GGWCC 1 cut(s) 355
SmiMI CAYNNNNRTG 4 cut(s) 1140, 1631, 1928, 2072
SmlI CTYRAG 6 cut(s) 323, 395, 581, 774, 1247, 2195
SmoI CTYRAG 6 cut(s) 323, 395, 581, 774, 1247, 2195
Sse9I AATT 8 cut(s) 160, 304, 993, 1335, 1464, 1695, 1771, 2175
SsiI CCGC 3 cut(s) 130, 617, 2514
SspMI CTAG 6 cut(s) 614, 927, 1257, 2271, 2289, 2345
SstI GAGCTC 1 cut(s) 365
StyD4I CCNGG 6 cut(s) 466, 741, 1354, 2092, 2212, 2323
StyI CCWWGG 2 cut(s) 233, 1818
TaaI ACNGT 6 cut(s) 848, 1065, 1325, 1418, 2000, 2254
TaiI ACGT 4 cut(s) 348, 1205, 1758, 2046
TaqI TCGA 3 cut(s) 675, 1679, 2159
TaqII GACCGA 1 cut(s) 515
TasI AATT 8 cut(s) 160, 304, 993, 1335, 1464, 1695, 1771, 2175
TatI WGTACW 6 cut(s) 92, 563, 843, 1229, 2370, 2577
TscAI CASTG 4 cut(s) 853, 1081, 1465, 2590
TseFI GTSAC 8 cut(s) 527, 1405, 1534, 1633, 2000, 2008, 2131, 2273
TseI GCWGC 3 cut(s) 132, 2426, 2453
Tsp45I GTSAC 8 cut(s) 527, 1405, 1534, 1633, 2000, 2008, 2131, 2273
TspDTI ATGAA 7 cut(s) 17, 32, 908, 1083, 2090, 2495, 2577
TspGWI ACGGA 4 cut(s) 431, 500, 1375, 1611
TspRI CASTG 4 cut(s) 853, 1081, 1465, 2590
VpaK11BI GGWCC 1 cut(s) 355
XapI RAATTY 3 cut(s) 160, 1335, 1695
XceI RCATGY 4 cut(s) 701, 1246, 1375, 1630
XcmI CCANNNNNNNNNTGG 2 cut(s) 632, 1663
XmiI GTMKAC 2 cut(s) 221, 1679
XmnI GAANNNNTTC 1 cut(s) 1265
XspI CTAG 6 cut(s) 614, 927, 1257, 2271, 2289, 2345
ZrmI AGTACT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.