Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004716

Physical Location & Seq

Genomic Coordinates Reverse (-)

6455909 .. 6462185

Gene Structure 6277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00004670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGAAATGAAGGGTTTTGGGTCGATTGATATGTCATCTGTGTTTGTGATTTTTCTGGTATGTGTATGTGGATGTGGTTTGGCTGAGGGTAAGGAGTGTACAAACACTGTTCATCCTGGGATGGCATCACATACTTTACGGTTTGCGCTTTTATCTTCCAATAATGAAAGTTTGAAGAAGGAGATGTTCTCACACTACCACGTGACACCAAGTGATGATATTGCTTGGTTGAATTTGCTCCCAAGAAAGATATTGAGGGAGGAAGATGAATATGAGTGGTCAGTGCTGTACCGGAAGATGAAAATCTCCGCTGGTGGTTCTGAGACCCCCGGAGGTTTTCTTAAGGAAGTGTCATTGCATGATGTGAGGTTGGATCCAACTTCACAACATGGGAAGGCACAGCAAACAAATCTAGAGTACCTGTTGATGTTGGATTCGGATAGTTTAGTTTGGAGCTTTCGAAAGACAGCTGGTTTAGAAACCCCTGGGGCACCATATGATGCTGAAGGTTCATGGGAGGCATCGACTGGTGAACTGCGGGGTCATTTTGTAGGGCATTATTTGAGTGCTTCAGCAATGATGTGGGCTAGCACTCATAATGATACTCTCAAAGAGAAGATGTCTGGGATTGTGTCAAGTCTTTCTCTTTGTCAGAAGAAAATTGGCAGTGGATATCTTTCGGCTTTTCCAACTGAGGAATTTGATCGCTTTGAAGCTATTACACCTGTCTGGGCTCCTTATTATACCATTCACAAGATCTTGGCAGGCCTGTTTGATCAGTATACACTTGCTGGTAGTGATCAAGCTTTTGATATGATGAAATGGATGGTTGATTACTTTTACAAACGTGTTCAGAATGTGATATCGAAGTACAGTATAGCACGCCATTATCTGTCACTCAATGAAGAAACTGGTGGCATGAATGACATTCTTTATAAGTTATATGCTATCACGGGAGATACAAAGCATTTATTGTTGGCTCATCTTTTTGACAAACCCTGCTTTCTAGGAGTGTTGGCAGTGCAGGCTGATGACATATCTGGTTTTCACACTAACACGCATATTCCAGTTGTCATTGGTGCTCAAAAGCGGTATGAAGTCACTGGTGATCCACTTTATAAGGAAATGGGGATTTTCTTTATGGACATGGTTAACTCTTCTCACAGCTATGCAACAGGAGGGACATCAGTGAGCGAGTTTTGGTCAGACCCTAAAAGATTGGCGGCCACTCTACAATCAGAGAATGAGGAATCGTGCACAACTTATAACATGCTGAAGGTCTCTCGCAACCTGTTTAGATGGACCAAAGAAACAGCATATGCGGATTATTACGAGCGAGCTCTAACAAATGGTGTTCTAGGTATCCAAAGAGGAACTGAGCCTGGAGTCATGATCTACATGCTCCCACTAGGTCGAGGACAGTCCAAGGCCAAGAGTTATCATGGTTGGGGATCACCATTTGGCAATTTCTGGTGTTGTTATGGCACTGGGATTGAATCGTTCTCTAAGTTGGGAGATTCCATTTATTTTGAAGAGGAAGGAGAAACTCCTGGTCTTTACATTATCCAGTATATATCAAGCTTGCTTGATTGGAAATCTGGGCAAGTCGTACTTAATCAGACAGTTGATAACGTCAATTCCTGGGATCCTTACCTTAGAATCACGTTAACATTTTCTTCAACGAAGGGGACGGGCAAATCATCTACCTTGAACTTGCGAATGCCAATTTGGACTAATTCAGATGGTGCAAAGGCAGCATTGAATGGTCGAAGTCTGCAGCTATCATCTCCAGGTAGTTTCTTACCAATCCCAAATAAATGGAGCCATGGTGACACAGTAACTCTTCAGCTACCCATTACTCTGAGAACAGAAGCTATTAAAGATGATCGGACAGAGTATGCTTCACTCCAAGCAATTCTTTATGGTCCAGTTCTGCTTGCAGCTCATACTAGTGGTAACTGGGACCTCCAAACCAAGTCCAACTCCCTTTCAGACTGGATAACTCCAATCCCTTCCTCGTACAATAACTATTTGGTTTCTTTCTCCCAAGAGTACAAAAACTCTACTTTTGCCTTGGCCAATTTAGACCAGTCGATTGAACTAGACAACTTTCCGGAAGCAGGCACTGCTGCTGCTGTTCATGCCACTTTCAGACTCATTTTAGATGATTTGTCAATAAAAGTTTCCAAAGCGCAAGATGCTATTGGTAAATCAGTCATGCTAGAACTGTTTGATCTTCCTGGGAAGGTTCTTGGGCATCAAGGGAAAGACAAGAACCTTGTGATAGCAGATTCTTCAAGTAGCAAGGACAACATAGTTTTTCGCTTGGTTCCAGGTTTGGATGGAAAGAATGCATCGGCCTCCTTAGAGTCAGAAAGTGACGAGGGTTGCTTTGTGTATAGCTCGGAGTTGGGGGTTAATGCAACCTTGAAGCTCGGTTGCAATTTAGAATCGTCAAACGATGGATTCAAACAGGCAGCCAGCTTTGTAATGAAGAGTGGAATAAGTCAGTATCATCCTATAAGCTTTGTTGCCCAAGGGGAGCATAGGAATTTTCTTCTACAACCGTTGTCAAGCTTCATGGATGAATTTTATACTGTCTATCTTAACATTACAACTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AbfB Glyco_hydro_127

Protein Analysis

874

Amino Acids

97.01

Weight (kDa)

5.49

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-AFase-like_GH127_cat	PF07944	121 - 506	1.9e-107	Beta-L-arabinofuranosidase, GH127 catalytic domain
Glyco_hydro127M	PF20736	519 - 619	7e-15	Beta-L-arabinofuranosidase, GH127 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12950 AT5G12960
fragaria_vesca	FvH4_3g43250 FvH4_3g43250 FvH4_3g43250
malus_domestica	MD03G1023400.v1.1 MD11G1028500.v1.1
prunus_persica	Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1
pyrus_communis	pycom03g02000 pycom11g02200
rosa_chinensis	RchiOBHm_Chr5g0077301 RchiOBHm_Chr5g0077311
rosa_laevigata	RLG00000002632 RLG00000036683 RLG00000036684
rosa_multiflora	Rmu_sc0000433.1_g000041
rosa_roxburghii	Rroxscaffold_1G00004600 Rroxscaffold_1G00004670
rosa_rugosa	Rorug05G0453600
rosa_samantha	Rh5AG508600 Rh5AG508700 Rh5BG529700 Rh5BG529800 Rh5DG542300 Rh5DG542400
rosa_wichuraiana	Rw5G046870 Rw5G046880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	936, 1119, 1266
AccB1I	GGYRCC	1 cut(s)	490
AccI	GTMKAC	1 cut(s)	782
AccIII	TCCGGA	1 cut(s)	2113
AciI	CCGC	5 cut(s)	309, 538, 1090, 1223, 1322
AclWI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1640, 1653
AcoI	YGGCCR	2 cut(s)	1224, 2076
AcsI	RAATTY	4 cut(s)	232, 698, 2551, 2588
AcuI	CTGAAG	4 cut(s)	525, 555, 1295, 1829
AcvI	CACGTG	1 cut(s)	202
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	7 cut(s)	100, 290, 419, 872, 1611, 2021, 2054
AfiI	CCNNNNNNNGG	1 cut(s)	2120
AflII	CTTAAG	1 cut(s)	341
AflIII	ACRYGT	1 cut(s)	847
AhlI	ACTAGT	1 cut(s)	1949
AjnI	CCWGG	8 cut(s)	115, 484, 1381, 1549, 1640, 1789, 2239, 2332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1711, 1743
Alw21I	GWGCWC	3 cut(s)	1084, 1259, 1342
Alw26I	GTCTC	2 cut(s)	317, 1285
Alw44I	GTGCAC	1 cut(s)	1255
AlwI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1640, 1653
AlwNI	CAGNNNCTG	1 cut(s)	2126
Aor13HI	TCCGGA	1 cut(s)	2113
AoxI	GGCC	5 cut(s)	766, 1224, 1428, 2076, 2358
ApaLI	GTGCAC	1 cut(s)	1255
ApeKI	GCWGC	6 cut(s)	1754, 1777, 1940, 2129, 2132, 2477
ApoI	RAATTY	4 cut(s)	232, 698, 2551, 2588
AspLEI	GCGC	2 cut(s)	148, 2194
AspS9I	GGNCC	3 cut(s)	1302, 1925, 1963
AsuC2I	CCSGG	1 cut(s)	330
AsuHPI	GGTGA	4 cut(s)	542, 1118, 1446, 1841
AsuII	TTCGAA	1 cut(s)	460
AsuNHI	GCTAGC	1 cut(s)	587
AvaII	GGWCC	3 cut(s)	1302, 1925, 1963
BaeGI	GKGCMC	2 cut(s)	493, 1259
BalI	TGGCCA	1 cut(s)	2078
BamHI	GGATCC	2 cut(s)	373, 1645
BanI	GGYRCC	1 cut(s)	490
BanII	GRGCYC	2 cut(s)	736, 1342
BbrPI	CACGTG	1 cut(s)	202
Bbv12I	GWGCWC	3 cut(s)	1084, 1259, 1342
BbvCI	CCTCAGC	1 cut(s)	84
BbvI	GCAGC	6 cut(s)	1766, 1789, 1952, 2116, 2119, 2489
BccI	CCATC	6 cut(s)	115, 820, 1293, 1736, 2336, 2456
BciT130I	CCWGG	8 cut(s)	117, 486, 1383, 1551, 1642, 1791, 2241, 2334
BciVI	GTATCC	1 cut(s)	1373
BclI	TGATCA	2 cut(s)	775, 799
BcnI	CCSGG	1 cut(s)	330
BcoDI	GTCTC	2 cut(s)	317, 1285
BcuI	ACTAGT	1 cut(s)	1949
BfaI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1950, 2102, 2222
BfmI	CTRYAG	1 cut(s)	1775
BfrI	CTTAAG	1 cut(s)	341
BfuI	GTATCC	1 cut(s)	1373
BglII	AGATCT	1 cut(s)	756
BisI	GCNGC	7 cut(s)	1224, 1755, 1778, 1941, 2130, 2133, 2478
BlsI	GCNGC	7 cut(s)	1225, 1756, 1779, 1942, 2131, 2134, 2479
Bme1390I	CCNGG	9 cut(s)	117, 330, 486, 1383, 1551, 1642, 1791, 2241, 2334
Bme18I	GGWCC	3 cut(s)	1302, 1925, 1963
BmgT120I	GGNCC	3 cut(s)	1302, 1925, 1963
BmiI	GGNNCC	7 cut(s)	375, 492, 735, 1647, 1823, 1964, 2331
BmrFI	CCNGG	9 cut(s)	117, 330, 486, 1383, 1551, 1642, 1791, 2241, 2334
BmrI	ACTGGG	2 cut(s)	1497, 1969
BmsI	GCATC	6 cut(s)	134, 490, 530, 2188, 2266, 2363
BmtI	GCTAGC	1 cut(s)	591
BmuI	ACTGGG	2 cut(s)	1497, 1969
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
BpmI	CTGGAG	2 cut(s)	1404, 1773
Bpu10I	CCTNAGC	1 cut(s)	84
Bpu14I	TTCGAA	1 cut(s)	460
BpuMI	CCSGG	1 cut(s)	330
BsaAI	YACGTR	1 cut(s)	202
BsaBI	GATNNNNATC	1 cut(s)	302
BsaI	GGTCTC	2 cut(s)	317, 1285
BsaWI	WCCGGW	2 cut(s)	291, 2113
BsaXI	ACNNNNNCTCC	2 cut(s)	1813, 1843
Bsc4I	CCNNNNNNNGG	1 cut(s)	2120
Bse3DI	GCAATG	2 cut(s)	353, 582
Bse8I	GATNNNNATC	1 cut(s)	302
BseAI	TCCGGA	1 cut(s)	2113
BseBI	CCWGG	8 cut(s)	117, 486, 1383, 1551, 1642, 1791, 2241, 2334
BseGI	GGATG	7 cut(s)	77, 112, 126, 831, 2347, 2515, 2590
BseJI	GATNNNNATC	1 cut(s)	302
BseLI	CCNNNNNNNGG	1 cut(s)	2120
BseMI	GCAATG	2 cut(s)	353, 582
BseMII	CTCAG	5 cut(s)	75, 312, 684, 1368, 1853
BseSI	GKGCMC	2 cut(s)	493, 1259
BseXI	GCAGC	6 cut(s)	1766, 1789, 1952, 2116, 2119, 2489
BsgI	GTGCAG	1 cut(s)	1043
BshFI	GGCC	5 cut(s)	768, 1226, 1430, 2078, 2360
BshNI	GGYRCC	1 cut(s)	490
BsiHKAI	GWGCWC	3 cut(s)	1084, 1259, 1342
BsiSI	CCGG	3 cut(s)	292, 330, 2114
BslFI	GGGAC	3 cut(s)	1195, 1702, 1976
BslI	CCNNNNNNNGG	1 cut(s)	2120
BsmAI	GTCTC	2 cut(s)	317, 1285
BsmFI	GGGAC	3 cut(s)	1195, 1702, 1976
BsmI	GAATGC	2 cut(s)	1725, 2356
BsnI	GGCC	5 cut(s)	768, 1226, 1430, 2078, 2360
Bso31I	GGTCTC	2 cut(s)	317, 1285
Bsp119I	TTCGAA	1 cut(s)	460
Bsp1286I	GDGCHC	5 cut(s)	493, 736, 1084, 1259, 1342
Bsp13I	TCCGGA	1 cut(s)	2113
Bsp1407I	TGTACA	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	1825
BspACI	CCGC	5 cut(s)	309, 538, 1090, 1223, 1322
BspANI	GGCC	5 cut(s)	768, 1226, 1430, 2078, 2360
BspCNI	CTCAG	5 cut(s)	76, 313, 685, 1369, 1854
BspEI	TCCGGA	1 cut(s)	2113
BspHI	TCATGA	1 cut(s)	1389
BspLI	GGNNCC	7 cut(s)	375, 492, 735, 1647, 1823, 1964, 2331
BspMAI	CTGCAG	1 cut(s)	1779
BspOI	GCTAGC	1 cut(s)	591
BspPI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1640, 1653
BspT104I	TTCGAA	1 cut(s)	460
BspT107I	GGYRCC	1 cut(s)	490
BspTI	CTTAAG	1 cut(s)	341
BspTNI	GGTCTC	2 cut(s)	317, 1285
BsrDI	GCAATG	2 cut(s)	353, 582
BsrGI	TGTACA	1 cut(s)	98
BssNAI	GTATAC	1 cut(s)	783
BssT1I	CCWWGG	4 cut(s)	1425, 1825, 2073, 2536
Bst1107I	GTATAC	1 cut(s)	783
Bst2UI	CCWGG	8 cut(s)	117, 486, 1383, 1551, 1642, 1791, 2241, 2334
Bst6I	CTCTTC	4 cut(s)	1162, 1527, 1848, 2489
BstAFI	CTTAAG	1 cut(s)	341
BstAPI	GCANNNNNTGC	1 cut(s)	2126
BstAUI	TGTACA	1 cut(s)	98
BstBAI	YACGTR	1 cut(s)	202
BstBI	TTCGAA	1 cut(s)	460
BstC8I	GCNNGC	9 cut(s)	589, 766, 883, 1026, 1338, 1583, 1938, 2122, 2482
BstDEI	CTNAG	8 cut(s)	84, 321, 693, 1377, 1506, 1655, 1862, 2365
BstDSI	CCRYGG	1 cut(s)	1825
BstF5I	GGATG	7 cut(s)	77, 112, 126, 831, 2347, 2515, 2590
BstHHI	GCGC	2 cut(s)	148, 2194
BstMAI	GTCTC	2 cut(s)	317, 1285
BstMWI	GCNNNNNNNGC	5 cut(s)	1025, 1754, 2126, 2141, 2198
BstNI	CCWGG	8 cut(s)	117, 486, 1383, 1551, 1642, 1791, 2241, 2334
BstNSI	RCATGY	2 cut(s)	1273, 1402
BstSCI	CCNGG	9 cut(s)	115, 328, 484, 1381, 1549, 1640, 1789, 2239, 2332
BstSFI	CTRYAG	1 cut(s)	1775
BstSLI	GKGCMC	2 cut(s)	493, 1259
BstV1I	GCAGC	6 cut(s)	1766, 1789, 1952, 2116, 2119, 2489
BstX2I	RGATCY	3 cut(s)	373, 756, 1645
BstXI	CCANNNNNNTGG	1 cut(s)	1818
BstYI	RGATCY	3 cut(s)	373, 756, 1645
BstZ17I	GTATAC	1 cut(s)	783
BsuI	GTATCC	1 cut(s)	1373
BsuRI	GGCC	5 cut(s)	768, 1226, 1430, 2078, 2360
BtgI	CCRYGG	1 cut(s)	1825
BtsCI	GGATG	7 cut(s)	77, 112, 126, 831, 2347, 2515, 2590
BtsI	GCAGTG	3 cut(s)	673, 1026, 2124
BtsIMutI	CAGTG	8 cut(s)	105, 288, 673, 1026, 1101, 1194, 1485, 2124
Cac8I	GCNNGC	9 cut(s)	589, 766, 883, 1026, 1338, 1583, 1938, 2122, 2482
CaiI	CAGNNNCTG	1 cut(s)	2126
CciI	TCATGA	1 cut(s)	1389
CfoI	GCGC	2 cut(s)	148, 2194
Cfr13I	GGNCC	3 cut(s)	1302, 1925, 1963
Csp6I	GTAC	7 cut(s)	99, 289, 418, 871, 1610, 2020, 2053
CviQI	GTAC	7 cut(s)	99, 289, 418, 871, 1610, 2020, 2053
DdeI	CTNAG	8 cut(s)	84, 321, 693, 1377, 1506, 1655, 1862, 2365
DraIII	CACNNNGTG	1 cut(s)	212
EaeI	YGGCCR	2 cut(s)	1224, 2076
Eam1104I	CTCTTC	4 cut(s)	1162, 1527, 1848, 2489
EarI	CTCTTC	4 cut(s)	1162, 1527, 1848, 2489
Ecl136II	GAGCTC	1 cut(s)	1340
Eco130I	CCWWGG	4 cut(s)	1425, 1825, 2073, 2536
Eco147I	AGGCCT	1 cut(s)	768
Eco24I	GRGCYC	2 cut(s)	736, 1342
Eco31I	GGTCTC	2 cut(s)	317, 1285
Eco32I	GATATC	2 cut(s)	674, 864
Eco47I	GGWCC	3 cut(s)	1302, 1925, 1963
Eco53kI	GAGCTC	1 cut(s)	1340
Eco57I	CTGAAG	4 cut(s)	525, 555, 1295, 1829
Eco72I	CACGTG	1 cut(s)	202
EcoICRI	GAGCTC	1 cut(s)	1340
EcoO109I	RGGNCCY	1 cut(s)	1963
EcoRII	CCWGG	8 cut(s)	115, 484, 1381, 1549, 1640, 1789, 2239, 2332
EcoRV	GATATC	2 cut(s)	674, 864
EcoT14I	CCWWGG	4 cut(s)	1425, 1825, 2073, 2536
EcoT22I	ATGCAT	1 cut(s)	2356
EcoT38I	GRGCYC	2 cut(s)	736, 1342
ErhI	CCWWGG	4 cut(s)	1425, 1825, 2073, 2536
FalI	AAGNNNNNCTT	4 cut(s)	1596, 1628, 1902, 1934
FaqI	GGGAC	3 cut(s)	1195, 1702, 1976
FauI	CCCGC	1 cut(s)	531
FauNDI	CATATG	2 cut(s)	496, 1318
FbaI	TGATCA	2 cut(s)	775, 799
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	7 cut(s)	1224, 1755, 1778, 1941, 2130, 2133, 2478
FokI	GGATG	7 cut(s)	84, 99, 133, 838, 2354, 2502, 2597
FriOI	GRGCYC	2 cut(s)	736, 1342
Fsp4HI	GCNGC	7 cut(s)	1224, 1755, 1778, 1941, 2130, 2133, 2478
FspBI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1950, 2102, 2222
GlaI	GCGC	2 cut(s)	147, 2193
GluI	GCNGC	7 cut(s)	1224, 1755, 1778, 1941, 2130, 2133, 2478
GsuI	CTGGAG	2 cut(s)	1404, 1773
HaeIII	GGCC	5 cut(s)	768, 1226, 1430, 2078, 2360
HapII	CCGG	3 cut(s)	292, 330, 2114
HhaI	GCGC	2 cut(s)	148, 2194
Hin6I	GCGC	2 cut(s)	146, 2192
HinP1I	GCGC	2 cut(s)	146, 2192
HincII	GTYRAC	2 cut(s)	1153, 1668
HindII	GTYRAC	2 cut(s)	1153, 1668
HindIII	AAGCTT	4 cut(s)	804, 1579, 2524, 2575
HpaI	GTTAAC	2 cut(s)	1153, 1668
HpaII	CCGG	3 cut(s)	292, 330, 2114
HphI	GGTGA	4 cut(s)	542, 1118, 1446, 1841
Hpy166II	GTNNAC	6 cut(s)	99, 533, 783, 1153, 1257, 1668
Hpy188III	TCNNGA	3 cut(s)	413, 1390, 2114
Hpy8I	GTNNAC	6 cut(s)	99, 533, 783, 1153, 1257, 1668
HpyAV	CCTTC	9 cut(s)	4, 172, 388, 500, 1270, 1532, 1678, 2022, 2239
HpyCH4IV	ACGT	4 cut(s)	201, 847, 1632, 1664
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1025, 1754, 2126, 2141, 2198
HpyF3I	CTNAG	8 cut(s)	84, 321, 693, 1377, 1506, 1655, 1862, 2365
HpySE526I	ACGT	4 cut(s)	201, 847, 1632, 1664
HspAI	GCGC	2 cut(s)	146, 2192
Kpn2I	TCCGGA	1 cut(s)	2113
Ksp22I	TGATCA	2 cut(s)	775, 799
KspAI	GTTAAC	2 cut(s)	1153, 1668
LmnI	GCTCC	6 cut(s)	243, 453, 739, 1407, 1821, 2542
Lsp1109I	GCAGC	6 cut(s)	1766, 1789, 1952, 2116, 2119, 2489
LweI	GCATC	6 cut(s)	134, 490, 530, 2188, 2266, 2363
MaeI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1950, 2102, 2222
MaeII	ACGT	4 cut(s)	201, 847, 1632, 1664
MaeIII	GTNAC	7 cut(s)	202, 894, 1099, 1829, 1837, 1955, 2378
MflI	RGATCY	3 cut(s)	373, 756, 1645
MhlI	GDGCHC	5 cut(s)	493, 736, 1084, 1259, 1342
MlsI	TGGCCA	1 cut(s)	2078
MluNI	TGGCCA	1 cut(s)	2078
MlyI	GAGTC	3 cut(s)	1395, 2148, 2378
MmeI	TCCRAC	5 cut(s)	351, 401, 411, 713, 2004
Mox20I	TGGCCA	1 cut(s)	2078
Mph1103I	ATGCAT	1 cut(s)	2356
MroI	TCCGGA	1 cut(s)	2113
MscI	TGGCCA	1 cut(s)	2078
MseI	TTAA	8 cut(s)	342, 1152, 1614, 1667, 1878, 2418, 2607, 2623
MslI	CAYNNNNRTG	2 cut(s)	1167, 1950
Msp20I	TGGCCA	1 cut(s)	2078
MspA1I	CMGCKG	2 cut(s)	311, 470
MspCI	CTTAAG	1 cut(s)	341
MspI	CCGG	3 cut(s)	292, 330, 2114
MspR9I	CCNGG	9 cut(s)	117, 330, 486, 1383, 1551, 1642, 1791, 2241, 2334
Mva1269I	GAATGC	2 cut(s)	1725, 2356
MvaI	CCWGG	8 cut(s)	117, 486, 1383, 1551, 1642, 1791, 2241, 2334
MwoI	GCNNNNNNNGC	5 cut(s)	1025, 1754, 2126, 2141, 2198
NciI	CCSGG	1 cut(s)	330
NcoI	CCATGG	1 cut(s)	1825
NdeI	CATATG	2 cut(s)	496, 1318
NheI	GCTAGC	1 cut(s)	587
NlaIV	GGNNCC	7 cut(s)	375, 492, 735, 1647, 1823, 1964, 2331
NmuCI	GTSAC	5 cut(s)	202, 894, 1099, 1829, 2378
NsiI	ATGCAT	1 cut(s)	2356
NspI	RCATGY	2 cut(s)	1273, 1402
NspV	TTCGAA	1 cut(s)	460
PagI	TCATGA	1 cut(s)	1389
PasI	CCCWGGG	1 cut(s)	485
PceI	AGGCCT	1 cut(s)	768
PctI	GAATGC	2 cut(s)	1725, 2356
PfeI	GAWTC	8 cut(s)	434, 1250, 1496, 1517, 1659, 2291, 2450, 2466
PkrI	GCNGC	7 cut(s)	1225, 1756, 1779, 1942, 2131, 2134, 2479
PleI	GAGTC	3 cut(s)	1394, 2148, 2377
PmaCI	CACGTG	1 cut(s)	202
PmlI	CACGTG	1 cut(s)	202
PpsI	GAGTC	3 cut(s)	1394, 2148, 2377
Ppu21I	YACGTR	1 cut(s)	202
PpuMI	RGGWCCY	1 cut(s)	1963
PsiI	TTATAA	3 cut(s)	936, 1119, 1266
Psp124BI	GAGCTC	1 cut(s)	1342
Psp5II	RGGWCCY	1 cut(s)	1963
Psp6I	CCWGG	8 cut(s)	115, 484, 1381, 1549, 1640, 1789, 2239, 2332
PspCI	CACGTG	1 cut(s)	202
PspGI	CCWGG	8 cut(s)	115, 484, 1381, 1549, 1640, 1789, 2239, 2332
PspN4I	GGNNCC	7 cut(s)	375, 492, 735, 1647, 1823, 1964, 2331
PspPI	GGNCC	3 cut(s)	1302, 1925, 1963
PspPPI	RGGWCCY	1 cut(s)	1963
PstI	CTGCAG	1 cut(s)	1779
PstNI	CAGNNNCTG	1 cut(s)	2126
PsuI	RGATCY	3 cut(s)	373, 756, 1645
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	7 cut(s)	100, 290, 419, 872, 1611, 2021, 2054
RsaNI	GTAC	7 cut(s)	99, 289, 418, 871, 1610, 2020, 2053
RseI	CAYNNNNRTG	2 cut(s)	1167, 1950
SacI	GAGCTC	1 cut(s)	1342
SaqAI	TTAA	8 cut(s)	342, 1152, 1614, 1667, 1878, 2418, 2607, 2623
SatI	GCNGC	7 cut(s)	1224, 1755, 1778, 1941, 2130, 2133, 2478
Sau96I	GGNCC	3 cut(s)	1302, 1925, 1963
SchI	GAGTC	3 cut(s)	1395, 2148, 2378
ScrFI	CCNGG	9 cut(s)	117, 330, 486, 1383, 1551, 1642, 1791, 2241, 2334
SduI	GDGCHC	5 cut(s)	493, 736, 1084, 1259, 1342
SfaNI	GCATC	6 cut(s)	134, 490, 530, 2188, 2266, 2363
SfcI	CTRYAG	1 cut(s)	1775
SfuI	TTCGAA	1 cut(s)	460
SinI	GGWCC	3 cut(s)	1302, 1925, 1963
SmiMI	CAYNNNNRTG	2 cut(s)	1167, 1950
SmlI	CTYRAG	1 cut(s)	341
SmoI	CTYRAG	1 cut(s)	341
SpeI	ACTAGT	1 cut(s)	1949
SseBI	AGGCCT	1 cut(s)	768
SsiI	CCGC	5 cut(s)	309, 538, 1090, 1223, 1322
SspMI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1950, 2102, 2222
SstI	GAGCTC	1 cut(s)	1342
StuI	AGGCCT	1 cut(s)	768
StyD4I	CCNGG	9 cut(s)	115, 328, 484, 1381, 1549, 1640, 1789, 2239, 2332
StyI	CCWWGG	4 cut(s)	1425, 1825, 2073, 2536
TaiI	ACGT	4 cut(s)	204, 850, 1635, 1667
TaqI	TCGA	7 cut(s)	23, 460, 524, 866, 1414, 1768, 2093
TatI	WGTACW	3 cut(s)	98, 870, 2052
TauI	GCSGC	1 cut(s)	1226
TfiI	GAWTC	8 cut(s)	434, 1250, 1496, 1517, 1659, 2291, 2450, 2466
Tru1I	TTAA	8 cut(s)	342, 1152, 1614, 1667, 1878, 2418, 2607, 2623
Tru9I	TTAA	8 cut(s)	342, 1152, 1614, 1667, 1878, 2418, 2607, 2623
TscAI	CASTG	8 cut(s)	112, 288, 673, 1026, 1108, 1194, 1492, 2131
TseFI	GTSAC	5 cut(s)	202, 894, 1099, 1829, 2378
TseI	GCWGC	6 cut(s)	1754, 1777, 1940, 2129, 2132, 2477
Tsp45I	GTSAC	5 cut(s)	202, 894, 1099, 1829, 2378
TspRI	CASTG	8 cut(s)	112, 288, 673, 1026, 1108, 1194, 1492, 2131
Vha464I	CTTAAG	1 cut(s)	341
VneI	GTGCAC	1 cut(s)	1255
VpaK11BI	GGWCC	3 cut(s)	1302, 1925, 1963
XapI	RAATTY	4 cut(s)	232, 698, 2551, 2588
XbaI	TCTAGA	1 cut(s)	412
XceI	RCATGY	2 cut(s)	1273, 1402
XmiI	GTMKAC	1 cut(s)	782
XspI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1950, 2102, 2222
Zsp2I	ATGCAT	1 cut(s)	2356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.