Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004716

Physical Location & Seq

Genomic Coordinates Reverse (-)

81225140 .. 81230503

Gene Structure 5364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G046880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGAAATGAAGGGTTTTGGGTCGATTGATATGTCATCTGTGTTTGTGATTTTTCTGGTATGTGTATGTGGATGTGGTTTGGCTGAGGGTAAGGAGTGTACAAACACTGTTCACCCTGGGATGGCATCACATACTTTACGGTTTGCGCTTTTATCTTCCAATAATGAAAGTTTGAAGAAGGAGATGTTCTCACACTACCACGTGACACCAAGTGATGATATTGCTTGGTTGAATTTGCTCCCAAGAAAGATATTGAGGGAGGAAGATGAATATGAGTGGTCAGTGCTGTACCGGAAGATGAAAAACTCCGCTGGTGGTTCTGAGGCCCCCGGAGGTTTTCTCAAGGAAGTGTCATTGCATGATGTGAGGTTGGATCCAACTTCACAACATGGGAAGGCACAGCAAACAAATCTAGAGTACCTGTTGATGTTGGATTCGGATAGTTTAGTTTGGAGCTTTCGAAAGACAGCTGGTTTAGAAACCCCTGGGGCACCATATGATGCTGAAGGTTCGTGGGAGGCATCGACTGGTGAACTGCGGGGTCATTTTGTAGGGCATTATTTGAGTGCTTCAGCAATGATGTGGGCTAGCACTCATAATGATACTCTCAAAGAGAAGATGTCTGGGATTGTGTCAAGTCTCTCTCTTTGTCAGAAGGAAATTGGCAGTGGATATCTTTCGGCCTTTCCAACTGAGGAATTTGATCGCTTTGAAGCTATTACACCTGTCTGGGCTCCTTATTATACCATTCACAAGATCTTGGCAGGCCTGTTTGATCAGTATACACTTGCTGGTAGTGATCAAGCTTTTAATATGATGAAATGGATGGTTGATTACTTTTACAAACGTGTTCAGAATGTGATATCGAAGTACAGTATAGAACGCCATTATCTGTCACTCAATGAAGAAACTGGTGGCATGAATGACATTCTTTATAAGTTATATGCTATCACGGGAGATACAAAGCATTTATTGTTGGCTCATCTTTTTGACAAACCCTGCTTTCTAGGAGTGTTGGCAGTGCAGGCTGATGACATATCTGGTTTTCACACCAACACGCATATTCCAGTTCTCATTGGTGCTCAAAGCGGTATGAAGTCACTGGAAATGGGGATTTTCTTTATGGACATGGTTAACTCTTCTCACAGCTATGCAACAGGAGGGACATCAGTGAGCGAGTTTTGGTCAGACCCTAAAAGATTGGCGGCCACTCTACAATCAGAGAATGAGGAATCGTGCACAACTTATAACATGCTGAAGGTCTCTCGCAACCTGTTTAGATGGACCAAAGAAACAGCATATGCGGATTATTATGAGCGAGCTCTAACAAATGGTGTGCTAGGTATCCAAAGAGGAACCGAGCCTGGAGTCATGATCTACATGCTCCCACTAGGTCGTGGACAGTCCAAGGCCAAGAGTTATCATGGTTGGGGATCACCATTTGGCAATTTCTGGTGTTGTTATGGCACTGGGATTGAATCGTTCTCTAAGTTGGGAGATTCCATTTATTTTGAAGAGGAAGGAGAAACTCCTGGTCTTTACATTATCCAGTATATATCAAGCTTGCTTGATTGGAAATCTGGGCAAGTCGTACTTGATCAGACAGTTGATAACATCAATTCCTGGGATCCTTACCTTAGAATCACGTTAACATTTTCTTCAACGAAGGGTACGGGAAAATCATCTACCTTGAACTTGCGAATGCCAATTTGGACTGATTTAGATGGTGCAATGGCAGCATTGAATGGTCGAAGTCTGCAGCCATCAGCTCCAGGTAGTTTCTTACCAATCCCAAATAAATGGAGCCATGGTGACACAGTAACTCTTCAGCTACCCCTTACTCTGAGAACAGAAGCTATTAAAGATGATCGGACAGAGTATGCTTCACTCCAAGCAATTCTTTATGGTCCAGTTCTGCTTGCGGCTCATACTAGTGGTAACTGGGACCTCCAAACCAAGTCCAACTCCCTTTCAGACTGGATAACTCCAATCCCTTCCTCGTACAACAACTATTTGGTTTCTTTCTCCCAAGAGTACAAAAACTCTACTTTTGCCTTGGCCAATTTAGACCAGTCAATTGAACTAGACAACTTTCCAGAAGCAGGCACTGCTGCTGCTGTTCATGCCACTTTCAGACTCATTTTAGATGACTTGTCAATAAAAGTTCCCAAAGCGCAAGACGCTATTGGTAAATCAGTCATGCTAGAACTGTTTGATCTTCCTGGGAAGGTTCTTGGGCATCAAGGGAAAGACAAGAACCTTGTGATAGCAGATTCTTCAAGTAGCAAGGACAACATAGTTTTTCGCTTGGTTCCAGGTTTGGATGGAAAGAATACATCGACCTCCTTGGAGTCAGAAAGTGACAATGGTTGCTTTGTGTATAGCTCGGAGTTGGAGGTGAATGCAACCTTGAAGCTCGGTTGCTATTCAGAATCGTCAAACGATGGATTCAAACTGGCAGCCAGCTTTGTAATGAAGAGTGGAATAAGTCAGTATCATCCTATTAGCTTTGTTGCCCAAGGGGAGCATAGGAATTTTCTTCTACAACCATTGTCAAGCTTCATGGATGAATTTTATACTGTCTACCTTAACATTACAACTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AbfB Glyco_hydro_127

Protein Analysis

868

Amino Acids

96.35

Weight (kDa)

5.29

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-AFase-like_GH127_cat	PF07944	121 - 500	4.6e-99	Beta-L-arabinofuranosidase, GH127 catalytic domain
Glyco_hydro127M	PF20736	513 - 613	3.3e-14	Beta-L-arabinofuranosidase, GH127 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12950 AT5G12960
fragaria_vesca	FvH4_3g43250 FvH4_3g43250 FvH4_3g43250
malus_domestica	MD03G1023400.v1.1 MD11G1028500.v1.1
prunus_persica	Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1
pyrus_communis	pycom03g02000 pycom11g02200
rosa_chinensis	RchiOBHm_Chr5g0077301 RchiOBHm_Chr5g0077311
rosa_laevigata	RLG00000002632 RLG00000036683 RLG00000036684
rosa_multiflora	Rmu_sc0000433.1_g000041
rosa_roxburghii	Rroxscaffold_1G00004600 Rroxscaffold_1G00004670
rosa_rugosa	Rorug05G0453600
rosa_samantha	Rh5AG508600 Rh5AG508700 Rh5BG529700 Rh5BG529800 Rh5DG542300 Rh5DG542400
rosa_wichuraiana	Rw5G046870 Rw5G046880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	936, 1248
AccB1I	GGYRCC	1 cut(s)	490
AccI	GTMKAC	2 cut(s)	782, 2583
AciI	CCGC	6 cut(s)	309, 538, 1089, 1205, 1304, 1922
AclWI	GGATC	5 cut(s)	368, 381, 1441, 1622, 1635
AcoI	YGGCCR	2 cut(s)	1206, 2058
AcsI	RAATTY	4 cut(s)	232, 698, 2533, 2570
AcuI	CTGAAG	4 cut(s)	525, 555, 1277, 1811
AcvI	CACGTG	1 cut(s)	202
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	8 cut(s)	100, 290, 419, 872, 1593, 1672, 2003, 2036
AfiI	CCNNNNNNNGG	2 cut(s)	121, 2102
AflIII	ACRYGT	1 cut(s)	847
AhlI	ACTAGT	1 cut(s)	1931
AjnI	CCWGG	8 cut(s)	115, 484, 1363, 1531, 1622, 1771, 2221, 2314
AjuI	GAANNNNNNNTTGG	2 cut(s)	1693, 1725
Alw21I	GWGCWC	3 cut(s)	1084, 1241, 1324
Alw26I	GTCTC	2 cut(s)	644, 1267
Alw44I	GTGCAC	1 cut(s)	1237
AlwI	GGATC	5 cut(s)	368, 381, 1441, 1622, 1635
AlwNI	CAGNNNCTG	1 cut(s)	2108
AoxI	GGCC	6 cut(s)	324, 681, 766, 1206, 1410, 2058
ApaLI	GTGCAC	1 cut(s)	1237
ApeKI	GCWGC	5 cut(s)	1736, 1759, 2111, 2114, 2459
ApoI	RAATTY	4 cut(s)	232, 698, 2533, 2570
AspLEI	GCGC	2 cut(s)	148, 2176
AspS9I	GGNCC	4 cut(s)	325, 1284, 1907, 1945
AsuC2I	CCSGG	1 cut(s)	330
AsuHPI	GGTGA	5 cut(s)	104, 542, 1428, 1823, 2410
AsuII	TTCGAA	1 cut(s)	460
AsuNHI	GCTAGC	1 cut(s)	587
AvaII	GGWCC	3 cut(s)	1284, 1907, 1945
BaeGI	GKGCMC	2 cut(s)	493, 1241
BalI	TGGCCA	1 cut(s)	2060
BamHI	GGATCC	2 cut(s)	373, 1627
BanI	GGYRCC	1 cut(s)	490
BanII	GRGCYC	2 cut(s)	736, 1324
BbrPI	CACGTG	1 cut(s)	202
Bbv12I	GWGCWC	3 cut(s)	1084, 1241, 1324
BbvCI	CCTCAGC	1 cut(s)	84
BbvI	GCAGC	5 cut(s)	1748, 1771, 2098, 2101, 2471
BccI	CCATC	7 cut(s)	115, 820, 1275, 1718, 1771, 2318, 2438
BciT130I	CCWGG	8 cut(s)	117, 486, 1365, 1533, 1624, 1773, 2223, 2316
BciVI	GTATCC	1 cut(s)	1355
BclI	TGATCA	3 cut(s)	775, 799, 1597
BcnI	CCSGG	1 cut(s)	330
BcoDI	GTCTC	2 cut(s)	644, 1267
BcuI	ACTAGT	1 cut(s)	1931
BfaI	CTAG	8 cut(s)	413, 588, 1007, 1340, 1391, 1932, 2084, 2204
BfmI	CTRYAG	1 cut(s)	1757
BfuI	GTATCC	1 cut(s)	1355
BglII	AGATCT	1 cut(s)	756
BisI	GCNGC	7 cut(s)	1206, 1737, 1760, 1923, 2112, 2115, 2460
BlsI	GCNGC	7 cut(s)	1207, 1738, 1761, 1924, 2113, 2116, 2461
Bme1390I	CCNGG	9 cut(s)	117, 330, 486, 1365, 1533, 1624, 1773, 2223, 2316
Bme18I	GGWCC	3 cut(s)	1284, 1907, 1945
BmgT120I	GGNCC	4 cut(s)	325, 1284, 1907, 1945
BmiI	GGNNCC	9 cut(s)	327, 375, 492, 735, 1357, 1629, 1805, 1946, 2313
BmrFI	CCNGG	9 cut(s)	117, 330, 486, 1365, 1533, 1624, 1773, 2223, 2316
BmrI	ACTGGG	2 cut(s)	1479, 1951
BmsI	GCATC	4 cut(s)	134, 490, 530, 2248
BmtI	GCTAGC	1 cut(s)	591
BmuI	ACTGGG	2 cut(s)	1479, 1951
BplI	GAGNNNNNCTC	4 cut(s)	173, 205, 324, 356
BpmI	CTGGAG	2 cut(s)	1386, 1755
Bpu10I	CCTNAGC	1 cut(s)	84
Bpu14I	TTCGAA	1 cut(s)	460
BpuEI	CTTGAG	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	330
BsaAI	YACGTR	1 cut(s)	202
BsaI	GGTCTC	1 cut(s)	1267
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	2 cut(s)	1795, 1825
Bsc4I	CCNNNNNNNGG	2 cut(s)	121, 2102
Bse3DI	GCAATG	3 cut(s)	353, 582, 1737
BseBI	CCWGG	8 cut(s)	117, 486, 1365, 1533, 1624, 1773, 2223, 2316
BseGI	GGATG	6 cut(s)	77, 126, 831, 2329, 2497, 2572
BseLI	CCNNNNNNNGG	2 cut(s)	121, 2102
BseMI	GCAATG	3 cut(s)	353, 582, 1737
BseMII	CTCAG	4 cut(s)	75, 312, 684, 1835
BseSI	GKGCMC	2 cut(s)	493, 1241
BseXI	GCAGC	5 cut(s)	1748, 1771, 2098, 2101, 2471
BsgI	GTGCAG	1 cut(s)	1043
BshFI	GGCC	6 cut(s)	326, 683, 768, 1208, 1412, 2060
BshNI	GGYRCC	1 cut(s)	490
BsiHKAI	GWGCWC	3 cut(s)	1084, 1241, 1324
BsiSI	CCGG	2 cut(s)	292, 330
BslFI	GGGAC	2 cut(s)	1177, 1958
BslI	CCNNNNNNNGG	2 cut(s)	121, 2102
BsmAI	GTCTC	2 cut(s)	644, 1267
BsmFI	GGGAC	2 cut(s)	1177, 1958
BsmI	GAATGC	2 cut(s)	1707, 2407
BsnI	GGCC	6 cut(s)	326, 683, 768, 1208, 1412, 2060
Bso31I	GGTCTC	1 cut(s)	1267
Bsp119I	TTCGAA	1 cut(s)	460
Bsp1286I	GDGCHC	5 cut(s)	493, 736, 1084, 1241, 1324
Bsp1407I	TGTACA	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	1807
BspACI	CCGC	6 cut(s)	309, 538, 1089, 1205, 1304, 1922
BspANI	GGCC	6 cut(s)	326, 683, 768, 1208, 1412, 2060
BspCNI	CTCAG	4 cut(s)	76, 313, 685, 1836
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	9 cut(s)	327, 375, 492, 735, 1357, 1629, 1805, 1946, 2313
BspMAI	CTGCAG	1 cut(s)	1761
BspOI	GCTAGC	1 cut(s)	591
BspPI	GGATC	5 cut(s)	368, 381, 1441, 1622, 1635
BspT104I	TTCGAA	1 cut(s)	460
BspT107I	GGYRCC	1 cut(s)	490
BspTNI	GGTCTC	1 cut(s)	1267
BsrDI	GCAATG	3 cut(s)	353, 582, 1737
BsrGI	TGTACA	1 cut(s)	98
BssNAI	GTATAC	1 cut(s)	783
BssT1I	CCWWGG	5 cut(s)	1407, 1807, 2055, 2346, 2518
Bst1107I	GTATAC	1 cut(s)	783
Bst2UI	CCWGG	8 cut(s)	117, 486, 1365, 1533, 1624, 1773, 2223, 2316
Bst4CI	ACNGT	9 cut(s)	109, 141, 875, 1404, 1606, 1819, 2211, 2581, 2602
Bst6I	CTCTTC	4 cut(s)	1144, 1509, 1830, 2471
BstAPI	GCANNNNNTGC	1 cut(s)	2108
BstAUI	TGTACA	1 cut(s)	98
BstBAI	YACGTR	1 cut(s)	202
BstBI	TTCGAA	1 cut(s)	460
BstC8I	GCNNGC	8 cut(s)	589, 766, 1026, 1320, 1565, 1920, 2104, 2464
BstDEI	CTNAG	6 cut(s)	84, 321, 693, 1488, 1637, 1844
BstDSI	CCRYGG	1 cut(s)	1807
BstF5I	GGATG	6 cut(s)	77, 126, 831, 2329, 2497, 2572
BstHHI	GCGC	2 cut(s)	148, 2176
BstMAI	GTCTC	2 cut(s)	644, 1267
BstMWI	GCNNNNNNNGC	5 cut(s)	1025, 1736, 2108, 2123, 2180
BstNI	CCWGG	8 cut(s)	117, 486, 1365, 1533, 1624, 1773, 2223, 2316
BstNSI	RCATGY	2 cut(s)	1255, 1384
BstSCI	CCNGG	9 cut(s)	115, 328, 484, 1363, 1531, 1622, 1771, 2221, 2314
BstSFI	CTRYAG	1 cut(s)	1757
BstSLI	GKGCMC	2 cut(s)	493, 1241
BstV1I	GCAGC	5 cut(s)	1748, 1771, 2098, 2101, 2471
BstX2I	RGATCY	3 cut(s)	373, 756, 1627
BstXI	CCANNNNNNTGG	1 cut(s)	1800
BstYI	RGATCY	3 cut(s)	373, 756, 1627
BstZ17I	GTATAC	1 cut(s)	783
BsuI	GTATCC	1 cut(s)	1355
BsuRI	GGCC	6 cut(s)	326, 683, 768, 1208, 1412, 2060
BtgI	CCRYGG	1 cut(s)	1807
BtsCI	GGATG	6 cut(s)	77, 126, 831, 2329, 2497, 2572
BtsI	GCAGTG	3 cut(s)	673, 1026, 2106
BtsIMutI	CAGTG	8 cut(s)	105, 288, 673, 1026, 1100, 1176, 1467, 2106
Cac8I	GCNNGC	8 cut(s)	589, 766, 1026, 1320, 1565, 1920, 2104, 2464
CaiI	CAGNNNCTG	1 cut(s)	2108
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	2 cut(s)	148, 2176
Cfr13I	GGNCC	4 cut(s)	325, 1284, 1907, 1945
CseI	GACGC	1 cut(s)	2189
Csp6I	GTAC	8 cut(s)	99, 289, 418, 871, 1592, 1671, 2002, 2035
CviQI	GTAC	8 cut(s)	99, 289, 418, 871, 1592, 1671, 2002, 2035
DdeI	CTNAG	6 cut(s)	84, 321, 693, 1488, 1637, 1844
DraIII	CACNNNGTG	1 cut(s)	212
EaeI	YGGCCR	2 cut(s)	1206, 2058
Eam1104I	CTCTTC	4 cut(s)	1144, 1509, 1830, 2471
EarI	CTCTTC	4 cut(s)	1144, 1509, 1830, 2471
Ecl136II	GAGCTC	1 cut(s)	1322
Eco130I	CCWWGG	5 cut(s)	1407, 1807, 2055, 2346, 2518
Eco147I	AGGCCT	1 cut(s)	768
Eco24I	GRGCYC	2 cut(s)	736, 1324
Eco31I	GGTCTC	1 cut(s)	1267
Eco32I	GATATC	2 cut(s)	674, 864
Eco47I	GGWCC	3 cut(s)	1284, 1907, 1945
Eco53kI	GAGCTC	1 cut(s)	1322
Eco57I	CTGAAG	4 cut(s)	525, 555, 1277, 1811
Eco72I	CACGTG	1 cut(s)	202
EcoICRI	GAGCTC	1 cut(s)	1322
EcoO109I	RGGNCCY	2 cut(s)	325, 1945
EcoRII	CCWGG	8 cut(s)	115, 484, 1363, 1531, 1622, 1771, 2221, 2314
EcoRV	GATATC	2 cut(s)	674, 864
EcoT14I	CCWWGG	5 cut(s)	1407, 1807, 2055, 2346, 2518
EcoT38I	GRGCYC	2 cut(s)	736, 1324
ErhI	CCWWGG	5 cut(s)	1407, 1807, 2055, 2346, 2518
FalI	AAGNNNNNCTT	4 cut(s)	1578, 1610, 1884, 1916
FaqI	GGGAC	2 cut(s)	1177, 1958
FauI	CCCGC	1 cut(s)	531
FauNDI	CATATG	2 cut(s)	496, 1300
FbaI	TGATCA	3 cut(s)	775, 799, 1597
FblI	GTMKAC	2 cut(s)	782, 2583
Fnu4HI	GCNGC	7 cut(s)	1206, 1737, 1760, 1923, 2112, 2115, 2460
FokI	GGATG	6 cut(s)	84, 133, 838, 2336, 2484, 2579
FriOI	GRGCYC	2 cut(s)	736, 1324
Fsp4HI	GCNGC	7 cut(s)	1206, 1737, 1760, 1923, 2112, 2115, 2460
FspBI	CTAG	8 cut(s)	413, 588, 1007, 1340, 1391, 1932, 2084, 2204
GlaI	GCGC	2 cut(s)	147, 2175
GluI	GCNGC	7 cut(s)	1206, 1737, 1760, 1923, 2112, 2115, 2460
GsuI	CTGGAG	2 cut(s)	1386, 1755
HaeIII	GGCC	6 cut(s)	326, 683, 768, 1208, 1412, 2060
HapII	CCGG	2 cut(s)	292, 330
HgaI	GACGC	1 cut(s)	2189
HhaI	GCGC	2 cut(s)	148, 2176
Hin6I	GCGC	2 cut(s)	146, 2174
HinP1I	GCGC	2 cut(s)	146, 2174
HincII	GTYRAC	2 cut(s)	1135, 1650
HindII	GTYRAC	2 cut(s)	1135, 1650
HindIII	AAGCTT	3 cut(s)	804, 1561, 2557
HpaI	GTTAAC	2 cut(s)	1135, 1650
HpaII	CCGG	2 cut(s)	292, 330
HphI	GGTGA	5 cut(s)	104, 542, 1428, 1823, 2410
Hpy166II	GTNNAC	9 cut(s)	99, 112, 533, 783, 1135, 1239, 1400, 1650, 2584
Hpy188III	TCNNGA	3 cut(s)	413, 1372, 2096
Hpy8I	GTNNAC	9 cut(s)	99, 112, 533, 783, 1135, 1239, 1400, 1650, 2584
HpyCH4III	ACNGT	9 cut(s)	109, 141, 875, 1404, 1606, 1819, 2211, 2581, 2602
HpyCH4IV	ACGT	3 cut(s)	201, 847, 1646
HpyCH4V	TGCA	7 cut(s)	358, 1024, 1154, 1239, 1730, 1759, 2405
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1025, 1736, 2108, 2123, 2180
HpyF3I	CTNAG	6 cut(s)	84, 321, 693, 1488, 1637, 1844
HpySE526I	ACGT	3 cut(s)	201, 847, 1646
HspAI	GCGC	2 cut(s)	146, 2174
Ksp22I	TGATCA	3 cut(s)	775, 799, 1597
KspAI	GTTAAC	2 cut(s)	1135, 1650
LmnI	GCTCC	7 cut(s)	243, 453, 739, 1389, 1774, 1803, 2524
Lsp1109I	GCAGC	5 cut(s)	1748, 1771, 2098, 2101, 2471
LweI	GCATC	4 cut(s)	134, 490, 530, 2248
MaeI	CTAG	8 cut(s)	413, 588, 1007, 1340, 1391, 1932, 2084, 2204
MaeII	ACGT	3 cut(s)	201, 847, 1646
MaeIII	GTNAC	7 cut(s)	202, 894, 1098, 1811, 1819, 1937, 2360
MfeI	CAATTG	1 cut(s)	2076
MflI	RGATCY	3 cut(s)	373, 756, 1627
MhlI	GDGCHC	5 cut(s)	493, 736, 1084, 1241, 1324
MlsI	TGGCCA	1 cut(s)	2060
MluNI	TGGCCA	1 cut(s)	2060
MlyI	GAGTC	3 cut(s)	1377, 2130, 2360
MmeI	TCCRAC	6 cut(s)	351, 401, 411, 713, 1986, 2373
Mox20I	TGGCCA	1 cut(s)	2060
MscI	TGGCCA	1 cut(s)	2060
MseI	TTAA	6 cut(s)	810, 1134, 1649, 1860, 2589, 2605
MslI	CAYNNNNRTG	2 cut(s)	1149, 1932
Msp20I	TGGCCA	1 cut(s)	2060
MspA1I	CMGCKG	2 cut(s)	311, 470
MspI	CCGG	2 cut(s)	292, 330
MspR9I	CCNGG	9 cut(s)	117, 330, 486, 1365, 1533, 1624, 1773, 2223, 2316
MunI	CAATTG	1 cut(s)	2076
Mva1269I	GAATGC	2 cut(s)	1707, 2407
MvaI	CCWGG	8 cut(s)	117, 486, 1365, 1533, 1624, 1773, 2223, 2316
MwoI	GCNNNNNNNGC	5 cut(s)	1025, 1736, 2108, 2123, 2180
NciI	CCSGG	1 cut(s)	330
NcoI	CCATGG	1 cut(s)	1807
NdeI	CATATG	2 cut(s)	496, 1300
NheI	GCTAGC	1 cut(s)	587
NlaIV	GGNNCC	9 cut(s)	327, 375, 492, 735, 1357, 1629, 1805, 1946, 2313
NmuCI	GTSAC	5 cut(s)	202, 894, 1098, 1811, 2360
NspI	RCATGY	2 cut(s)	1255, 1384
NspV	TTCGAA	1 cut(s)	460
PagI	TCATGA	1 cut(s)	1371
PasI	CCCWGGG	2 cut(s)	116, 485
PceI	AGGCCT	1 cut(s)	768
PctI	GAATGC	2 cut(s)	1707, 2407
PfeI	GAWTC	8 cut(s)	434, 1232, 1478, 1499, 1641, 2273, 2432, 2448
PkrI	GCNGC	7 cut(s)	1207, 1738, 1761, 1924, 2113, 2116, 2461
PleI	GAGTC	3 cut(s)	1376, 2130, 2359
PmaCI	CACGTG	1 cut(s)	202
PmlI	CACGTG	1 cut(s)	202
PpsI	GAGTC	3 cut(s)	1376, 2130, 2359
Ppu21I	YACGTR	1 cut(s)	202
PpuMI	RGGWCCY	1 cut(s)	1945
PsiI	TTATAA	2 cut(s)	936, 1248
Psp124BI	GAGCTC	1 cut(s)	1324
Psp5II	RGGWCCY	1 cut(s)	1945
Psp6I	CCWGG	8 cut(s)	115, 484, 1363, 1531, 1622, 1771, 2221, 2314
PspCI	CACGTG	1 cut(s)	202
PspGI	CCWGG	8 cut(s)	115, 484, 1363, 1531, 1622, 1771, 2221, 2314
PspN4I	GGNNCC	9 cut(s)	327, 375, 492, 735, 1357, 1629, 1805, 1946, 2313
PspPI	GGNCC	4 cut(s)	325, 1284, 1907, 1945
PspPPI	RGGWCCY	1 cut(s)	1945
PstI	CTGCAG	1 cut(s)	1761
PstNI	CAGNNNCTG	1 cut(s)	2108
PsuI	RGATCY	3 cut(s)	373, 756, 1627
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	8 cut(s)	100, 290, 419, 872, 1593, 1672, 2003, 2036
RsaNI	GTAC	8 cut(s)	99, 289, 418, 871, 1592, 1671, 2002, 2035
RseI	CAYNNNNRTG	2 cut(s)	1149, 1932
SacI	GAGCTC	1 cut(s)	1324
SaqAI	TTAA	6 cut(s)	810, 1134, 1649, 1860, 2589, 2605
SatI	GCNGC	7 cut(s)	1206, 1737, 1760, 1923, 2112, 2115, 2460
Sau96I	GGNCC	4 cut(s)	325, 1284, 1907, 1945
SchI	GAGTC	3 cut(s)	1377, 2130, 2360
ScrFI	CCNGG	9 cut(s)	117, 330, 486, 1365, 1533, 1624, 1773, 2223, 2316
SduI	GDGCHC	5 cut(s)	493, 736, 1084, 1241, 1324
SfaNI	GCATC	4 cut(s)	134, 490, 530, 2248
SfcI	CTRYAG	1 cut(s)	1757
SfuI	TTCGAA	1 cut(s)	460
SinI	GGWCC	3 cut(s)	1284, 1907, 1945
SmiMI	CAYNNNNRTG	2 cut(s)	1149, 1932
SmlI	CTYRAG	1 cut(s)	341
SmoI	CTYRAG	1 cut(s)	341
SpeI	ACTAGT	1 cut(s)	1931
SseBI	AGGCCT	1 cut(s)	768
SsiI	CCGC	6 cut(s)	309, 538, 1089, 1205, 1304, 1922
SspMI	CTAG	8 cut(s)	413, 588, 1007, 1340, 1391, 1932, 2084, 2204
SstI	GAGCTC	1 cut(s)	1324
StuI	AGGCCT	1 cut(s)	768
StyD4I	CCNGG	9 cut(s)	115, 328, 484, 1363, 1531, 1622, 1771, 2221, 2314
StyI	CCWWGG	5 cut(s)	1407, 1807, 2055, 2346, 2518
TaaI	ACNGT	9 cut(s)	109, 141, 875, 1404, 1606, 1819, 2211, 2581, 2602
TaiI	ACGT	3 cut(s)	204, 850, 1649
TaqI	TCGA	6 cut(s)	23, 460, 524, 866, 1750, 2339
TatI	WGTACW	3 cut(s)	98, 870, 2034
TauI	GCSGC	2 cut(s)	1208, 1925
TfiI	GAWTC	8 cut(s)	434, 1232, 1478, 1499, 1641, 2273, 2432, 2448
Tru1I	TTAA	6 cut(s)	810, 1134, 1649, 1860, 2589, 2605
Tru9I	TTAA	6 cut(s)	810, 1134, 1649, 1860, 2589, 2605
TscAI	CASTG	8 cut(s)	112, 288, 673, 1026, 1107, 1176, 1474, 2113
TseFI	GTSAC	5 cut(s)	202, 894, 1098, 1811, 2360
TseI	GCWGC	5 cut(s)	1736, 1759, 2111, 2114, 2459
Tsp45I	GTSAC	5 cut(s)	202, 894, 1098, 1811, 2360
TspRI	CASTG	8 cut(s)	112, 288, 673, 1026, 1107, 1176, 1474, 2113
VneI	GTGCAC	1 cut(s)	1237
VpaK11BI	GGWCC	3 cut(s)	1284, 1907, 1945
XapI	RAATTY	4 cut(s)	232, 698, 2533, 2570
XbaI	TCTAGA	1 cut(s)	412
XceI	RCATGY	2 cut(s)	1255, 1384
XmiI	GTMKAC	2 cut(s)	782, 2583
XspI	CTAG	8 cut(s)	413, 588, 1007, 1340, 1391, 1932, 2084, 2204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.