Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004716

Physical Location & Seq

Genomic Coordinates Forward (+)

83466162 .. 83472269

Gene Structure 6108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG529800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGGAAATGAAGGGTTTTGGGTTTATTAATATGTCATCTGCGTTTGTGATTTTTCTGGTATGTGTATGTGGATGTGGTTTGGCTGAGGCTAGGGAGTGTACAAGCGCTGTTTATGCTTCCAAAAACGAAACTTTGAAGAATATGGTGCTCTCACACTATCACTTGACACCAAGTGATGATTCTGCTCGGTTGAAGTTGCACCCAAGAAAGATGTTGAGGGAGGAAGATGGATATGAGTGGTCAGTGCTGTACCGGAAGATGAAAACCTCCGGTGGTGGTCCTGGGGCCCCGGGAGGTCTTCTCAAGGAAGTGTCATTGCATGATGTGAGGTTGGATCCAACTTCACAACATGGGAAGGCACAGCAAACAAATCTAGAGTACCTGTTGATGTTGGATTCGGATAATTTACTTTGGAACTTTCGAAAGACAGCTGGTTTAGAAACCCCTGGGGAACCATATGATGCTAAAAGTTCGTGGGAGGCATCGACTAGTGAACTGCGGGGTCATTTTGTAGGGCATTATTTGAGTGCTTCAGCAATGATGTGGGCTAGCACTCATAATGATACTCTCAAAGAGAAGATGTCCGGGATTGTGTCGAGTCTTTCTCTTTGTCAGAAGGAAATTGGCAGTGGATATCTTTCGGCTTTTCCAACTGAGGAATTTGATCGCGTTGAAGCTCATACACCTGTCTGGGTTCCTTATTATACCATTCACAAGATCTTGGCAGGCCTGTTGGATCAGTATACGCTTGCTGGTAGTGATCAAGCTTTTAGTATGATTAAATGGATGGTTGAGTACTTTTACAAACGTGTTCAGAATGTGATATCGAAGTACAGTATAGCAAAACATTATCTGTCACTCGATGCAGAACCCGGTGGCATGAACGACGTTCTTTATAAATTATATGCTATCACGGGAGATACAAAGCATTTATTGTTGGCTCATCTTTTTGACAAACCCTGCTTTCTAGGATTGTTGGCGGTGCAGGCTAATGACATATCTTATTTTCACGCTAACACGCATATTGCAATTGTCATTGGTGCTCAAAAGCGCTATGAAGTCACTGGTGATCCACTTTATAAGGAAATGGGGATTTTCTTTATGGACATTGTTAACTCTTCTCACAGCTATGCAACAGGAGGGACATCAGTCCGCGAGCATTGGCAGGAACCTAAAAGATTGGGGACCGATCTAGGATCAGACAATGAGGAATCGTGCTCAACTTATAACATGCTGAAGGTCTCTCGCCACCTCTTTAGATGGACCAAAGAAACTCCATATGCGGATTATTATGAGCGAGCTCTAACAAATGGCGTGCTAGGTATCCAAAGAGGAACTGAGCCTGGAGTTATGATCTACTTCCTCCCACTAGGCCGTGGACAGTCCAAGTCCGTGAGTTCTTTTGGTTGGGGATCGCCATTTGGCCATTTCTGGTGCTGCTATGGTACTGGGATTGAATCATTCTCAAAGTTAGGAGATTCCATATATTTTGAAGAGGAAGGGGAAACTCCTGGTCTTTACATTATCCAGTATATATCAAGCTTGCTTGATTGGAAATCTGGGCAAGTCGTACTTAATCAGACAGTTGGTAACATCAATTCCTGGGATCCTTACCTTAGAATCACGTTAACATTTTCTTCCACGAAGGGGACAGGCAAATCATCAACCGTGAACTTGCGAATGCCAATTTGGACAGATTCAGATGGTGCAAAGGCAGCATTGAATGGTCGAAATCTGCATCCCTCATCTCCAGGTAGTTTCCTACCAATCCCAAATAAATGGAGCCATGGTGACACAGTAACTCTTGAGCTACCCATTAGTCTGAGAACAGAAACTATTAAAGACGATCGGGCAGAGTATGCTTCAGTCCAAGCAATTCTTTATGGTCCAGTTCTGCTTGCAGCTCATACCAGTGGTAACCGGGACATCCAAACTAAGTCAACTAATCTTTCAGACTGGATAACTCCACTCCCTTCCTCGTACAATAATTATTTGGTTTCTTTCTCCCAAGAGTTCGAAAAATCAACTTTTGCCTTGGCCAATTTAAACCAGTCGATCGAACTAGACAACTTTCCGGATGTAGGCACTGTTACTGCTGTTCATGCCACTTTCAGACTCATTTTAGATGACTTATCAACAAAAGATTTCAAAGCGCAAGATGCTATTGGAAAATCAGTCATGCTAGAACTGTTTGATCTTCCTGGGAAGGTTCTTGGGCATCAAGAGAAAGACAAGAACCTTGTGATAGCAGATTCTTCAAGTAGCAAGGAGAACATAGTTTTTCGCTTGGTTCCAGGTTTGGATGGAAAGTCTGCCTCAGTCTCCTTGGAGTCAGAAAGTGACAAGGGTTGCTTTGTCTATAGCTCGGAGTTGGAGGTTAATGCAGCCTTGAAGCTCGGTTGCAGTTCAAAATCGTCAAACGATGGATTCAAACAGGCAGCCAGCTTTGTAATGAAGAGTGGAATAAGTCAGTATCATCCTATCAGCTTTGTTGCCCAAGGGAAGCATCGGAATTTTCTTCTACAACCATTGTCAAGCTTCATGGATGAAACTTATACCGTCTATCTCAACATTACAACGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AbfB Glyco_hydro_127

Protein Analysis

861

Amino Acids

95.6

Weight (kDa)

5.97

Isoelectric Point (pI)

33.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-AFase-like_GH127_cat	PF07944	108 - 493	7.2e-105	Beta-L-arabinofuranosidase, GH127 catalytic domain
Glyco_hydro127M	PF20736	506 - 606	1.5e-13	Beta-L-arabinofuranosidase, GH127 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12950 AT5G12960
fragaria_vesca	FvH4_3g43250 FvH4_3g43250 FvH4_3g43250
malus_domestica	MD03G1023400.v1.1 MD11G1028500.v1.1
prunus_persica	Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1
pyrus_communis	pycom03g02000 pycom11g02200
rosa_chinensis	RchiOBHm_Chr5g0077301 RchiOBHm_Chr5g0077311
rosa_laevigata	RLG00000002632 RLG00000036683 RLG00000036684
rosa_multiflora	Rmu_sc0000433.1_g000041
rosa_roxburghii	Rroxscaffold_1G00004600 Rroxscaffold_1G00004670
rosa_rugosa	Rorug05G0453600
rosa_samantha	Rh5AG508600 Rh5AG508700 Rh5BG529700 Rh5BG529800 Rh5DG542300 Rh5DG542400
rosa_wichuraiana	Rw5G046870 Rw5G046880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	897, 1080, 1227
AccI	GTMKAC	1 cut(s)	743
AccII	CGCG	2 cut(s)	669, 1155
AccIII	TCCGGA	1 cut(s)	2074
AciI	CCGC	4 cut(s)	499, 980, 1153, 1283
AclWI	GGATC	8 cut(s)	329, 342, 744, 1064, 1204, 1420, 1601, 1614
AcoI	YGGCCR	2 cut(s)	1423, 2037
AcsI	RAATTY	2 cut(s)	659, 2512
AcuI	CTGAAG	3 cut(s)	516, 1256, 1848
AdeI	CACNNNGTG	1 cut(s)	173
AfaI	GTAC	8 cut(s)	100, 251, 380, 797, 833, 1447, 1572, 1982
AfeI	AGCGCT	2 cut(s)	106, 1052
AfiI	CCNNNNNNNGG	2 cut(s)	1647, 2081
AflIII	ACRYGT	1 cut(s)	808
AhlI	ACTAGT	1 cut(s)	488
AjnI	CCWGG	8 cut(s)	280, 445, 1342, 1510, 1601, 1750, 2200, 2293
AjuI	GAANNNNNNNTTGG	4 cut(s)	163, 195, 1672, 1704
Alw21I	GWGCWC	4 cut(s)	150, 1045, 1220, 1303
Alw26I	GTCTC	2 cut(s)	1246, 2326
AlwI	GGATC	8 cut(s)	329, 342, 744, 1064, 1204, 1420, 1601, 1614
Ama87I	CYCGRG	1 cut(s)	289
Aor13HI	TCCGGA	1 cut(s)	2074
Aor51HI	AGCGCT	2 cut(s)	106, 1052
AoxI	GGCC	5 cut(s)	285, 727, 1372, 1423, 2037
ApaI	GGGCCC	1 cut(s)	289
ApeKI	GCWGC	5 cut(s)	1437, 1715, 1901, 2384, 2438
ApoI	RAATTY	2 cut(s)	659, 2512
AseI	ATTAAT	1 cut(s)	27
AspLEI	GCGC	3 cut(s)	107, 1053, 2155
AspS9I	GGNCC	6 cut(s)	278, 285, 286, 1185, 1263, 1886
AsuC2I	CCSGG	5 cut(s)	290, 291, 586, 873, 1922
AsuHPI	GGTGA	2 cut(s)	1079, 1802
AsuII	TTCGAA	2 cut(s)	421, 2016
AsuNHI	GCTAGC	1 cut(s)	548
AvaI	CYCGRG	1 cut(s)	289
AvaII	GGWCC	4 cut(s)	278, 1185, 1263, 1886
BaeGI	GKGCMC	1 cut(s)	289
BalI	TGGCCA	2 cut(s)	1425, 2039
BamHI	GGATCC	2 cut(s)	334, 1606
BanII	GRGCYC	2 cut(s)	289, 1303
BbsI	GAAGAC	1 cut(s)	290
Bbv12I	GWGCWC	4 cut(s)	150, 1045, 1220, 1303
BbvCI	CCTCAGC	1 cut(s)	84
BbvI	GCAGC	5 cut(s)	1424, 1727, 1913, 2396, 2450
BccI	CCATC	6 cut(s)	221, 781, 1254, 1697, 2297, 2417
BceAI	ACGGC	1 cut(s)	1359
BciT130I	CCWGG	8 cut(s)	282, 447, 1344, 1512, 1603, 1752, 2202, 2295
BciVI	GTATCC	1 cut(s)	1334
BclI	TGATCA	1 cut(s)	760
BcnI	CCSGG	5 cut(s)	290, 291, 586, 873, 1922
BcoDI	GTCTC	2 cut(s)	1246, 2326
BcuI	ACTAGT	1 cut(s)	488
BfmI	CTRYAG	1 cut(s)	2359
BfoI	RGCGCY	2 cut(s)	108, 1054
BfuI	GTATCC	1 cut(s)	1334
BglII	AGATCT	1 cut(s)	717
BisI	GCNGC	5 cut(s)	1438, 1716, 1902, 2385, 2439
BlsI	GCNGC	5 cut(s)	1439, 1717, 1903, 2386, 2440
BmcAI	AGTACT	1 cut(s)	797
Bme18I	GGWCC	4 cut(s)	278, 1185, 1263, 1886
BmeT110I	CYCGRG	1 cut(s)	289
BmgT120I	GGNCC	6 cut(s)	278, 285, 286, 1185, 1263, 1886
BmrI	ACTGGG	1 cut(s)	1458
BmsI	GCATC	7 cut(s)	451, 491, 853, 1747, 2149, 2227, 2515
BmtI	GCTAGC	1 cut(s)	552
BmuI	ACTGGG	1 cut(s)	1458
BoxI	GACNNNNGTC	1 cut(s)	1148
BpiI	GAAGAC	1 cut(s)	290
BplI	GAGNNNNNCTC	4 cut(s)	285, 317, 589, 621
BpmI	CTGGAG	2 cut(s)	1365, 1734
Bpu10I	CCTNAGC	1 cut(s)	84
Bpu14I	TTCGAA	2 cut(s)	421, 2016
BpuEI	CTTGAG	2 cut(s)	287, 1826
BpuMI	CCSGG	5 cut(s)	290, 291, 586, 873, 1922
BsaI	GGTCTC	1 cut(s)	1246
BsaWI	WCCGGW	3 cut(s)	252, 269, 2074
BsaXI	ACNNNNNCTCC	2 cut(s)	1774, 1804
Bsc4I	CCNNNNNNNGG	2 cut(s)	1647, 2081
Bse1I	ACTGG	7 cut(s)	1069, 1453, 1528, 1889, 1911, 1961, 2050
Bse3DI	GCAATG	2 cut(s)	314, 543
BseAI	TCCGGA	1 cut(s)	2074
BseBI	CCWGG	8 cut(s)	282, 447, 1344, 1512, 1603, 1752, 2202, 2295
BseGI	GGATG	8 cut(s)	77, 792, 1738, 1926, 2083, 2308, 2476, 2551
BseLI	CCNNNNNNNGG	2 cut(s)	1647, 2081
BseMI	GCAATG	2 cut(s)	314, 543
BseMII	CTCAG	5 cut(s)	75, 645, 1329, 1814, 2331
BseNI	ACTGG	7 cut(s)	1069, 1453, 1528, 1889, 1911, 1961, 2050
BseSI	GKGCMC	1 cut(s)	289
BseXI	GCAGC	5 cut(s)	1424, 1727, 1913, 2396, 2450
BsgI	GTGCAG	1 cut(s)	1004
Bsh1236I	CGCG	2 cut(s)	669, 1155
Bsh1285I	CGRYCG	2 cut(s)	1849, 2058
BshFI	GGCC	5 cut(s)	287, 729, 1374, 1425, 2039
BsiEI	CGRYCG	2 cut(s)	1849, 2058
BsiHKAI	GWGCWC	4 cut(s)	150, 1045, 1220, 1303
BsiHKCI	CYCGRG	1 cut(s)	289
BsiSI	CCGG	7 cut(s)	253, 270, 290, 585, 873, 1921, 2075
BslFI	GGGAC	4 cut(s)	1156, 1198, 1663, 1937
BslI	CCNNNNNNNGG	2 cut(s)	1647, 2081
BsmAI	GTCTC	2 cut(s)	1246, 2326
BsmFI	GGGAC	4 cut(s)	1156, 1198, 1663, 1937
BsmI	GAATGC	1 cut(s)	1686
BsnI	GGCC	5 cut(s)	287, 729, 1374, 1425, 2039
Bso31I	GGTCTC	1 cut(s)	1246
BsoBI	CYCGRG	1 cut(s)	289
Bsp119I	TTCGAA	2 cut(s)	421, 2016
Bsp120I	GGGCCC	1 cut(s)	285
Bsp1286I	GDGCHC	5 cut(s)	150, 289, 1045, 1220, 1303
Bsp13I	TCCGGA	1 cut(s)	2074
Bsp1407I	TGTACA	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	1786
BspACI	CCGC	4 cut(s)	499, 980, 1153, 1283
BspANI	GGCC	5 cut(s)	287, 729, 1374, 1425, 2039
BspCNI	CTCAG	5 cut(s)	76, 646, 1330, 1815, 2330
BspEI	TCCGGA	1 cut(s)	2074
BspFNI	CGCG	2 cut(s)	669, 1155
BspOI	GCTAGC	1 cut(s)	552
BspPI	GGATC	8 cut(s)	329, 342, 744, 1064, 1204, 1420, 1601, 1614
BspT104I	TTCGAA	2 cut(s)	421, 2016
BspTNI	GGTCTC	1 cut(s)	1246
BsrDI	GCAATG	2 cut(s)	314, 543
BsrGI	TGTACA	1 cut(s)	98
BsrI	ACTGG	7 cut(s)	1069, 1453, 1528, 1889, 1911, 1961, 2050
BssNAI	GTATAC	1 cut(s)	744
BssT1I	CCWWGG	4 cut(s)	1786, 2034, 2325, 2497
Bst1107I	GTATAC	1 cut(s)	744
Bst2UI	CCWGG	8 cut(s)	282, 447, 1344, 1512, 1603, 1752, 2202, 2295
Bst4CI	ACNGT	9 cut(s)	836, 1383, 1585, 1669, 1798, 2089, 2190, 2560, 2581
Bst6I	CTCTTC	3 cut(s)	1123, 1488, 2450
BstAPI	GCANNNNNTGC	1 cut(s)	1859
BstAUI	TGTACA	1 cut(s)	98
BstBI	TTCGAA	2 cut(s)	421, 2016
BstDEI	CTNAG	7 cut(s)	84, 654, 1338, 1616, 1823, 1935, 2317
BstDSI	CCRYGG	2 cut(s)	1375, 1786
BstEII	GGTNACC	1 cut(s)	1916
BstF5I	GGATG	8 cut(s)	77, 792, 1738, 1926, 2083, 2308, 2476, 2551
BstFNI	CGCG	2 cut(s)	669, 1155
BstH2I	RGCGCY	2 cut(s)	108, 1054
BstHHI	GCGC	3 cut(s)	107, 1053, 2155
BstMAI	GTCTC	2 cut(s)	1246, 2326
BstMCI	CGRYCG	2 cut(s)	1849, 2058
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 986, 1715, 1859, 2102, 2159
BstNI	CCWGG	8 cut(s)	282, 447, 1344, 1512, 1603, 1752, 2202, 2295
BstNSI	RCATGY	1 cut(s)	1234
BstPAI	GACNNNNGTC	1 cut(s)	1148
BstPI	GGTNACC	1 cut(s)	1916
BstSFI	CTRYAG	1 cut(s)	2359
BstSLI	GKGCMC	1 cut(s)	289
BstUI	CGCG	2 cut(s)	669, 1155
BstV1I	GCAGC	5 cut(s)	1424, 1727, 1913, 2396, 2450
BstV2I	GAAGAC	1 cut(s)	290
BstX2I	RGATCY	3 cut(s)	334, 717, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	1779
BstYI	RGATCY	3 cut(s)	334, 717, 1606
BstZ17I	GTATAC	1 cut(s)	744
BsuI	GTATCC	1 cut(s)	1334
BsuRI	GGCC	5 cut(s)	287, 729, 1374, 1425, 2039
BtgI	CCRYGG	2 cut(s)	1375, 1786
BtsCI	GGATG	8 cut(s)	77, 792, 1738, 1926, 2083, 2308, 2476, 2551
BtsI	GCAGTG	1 cut(s)	634
BtsIMutI	CAGTG	5 cut(s)	249, 634, 1062, 1918, 2085
CfoI	GCGC	3 cut(s)	107, 1053, 2155
Cfr13I	GGNCC	6 cut(s)	278, 285, 286, 1185, 1263, 1886
Cfr9I	CCCGGG	1 cut(s)	289
Csp6I	GTAC	8 cut(s)	99, 250, 379, 796, 832, 1446, 1571, 1981
CviAII	CATG	8 cut(s)	320, 350, 880, 1231, 1787, 2102, 2179, 2542
CviQI	GTAC	8 cut(s)	99, 250, 379, 796, 832, 1446, 1571, 1981
DdeI	CTNAG	7 cut(s)	84, 654, 1338, 1616, 1823, 1935, 2317
DraI	TTTAAA	1 cut(s)	2046
DraIII	CACNNNGTG	1 cut(s)	173
EaeI	YGGCCR	2 cut(s)	1423, 2037
Eam1104I	CTCTTC	3 cut(s)	1123, 1488, 2450
EarI	CTCTTC	3 cut(s)	1123, 1488, 2450
Ecl136II	GAGCTC	1 cut(s)	1301
Eco130I	CCWWGG	4 cut(s)	1786, 2034, 2325, 2497
Eco147I	AGGCCT	1 cut(s)	729
Eco24I	GRGCYC	2 cut(s)	289, 1303
Eco31I	GGTCTC	1 cut(s)	1246
Eco32I	GATATC	2 cut(s)	635, 825
Eco47I	GGWCC	4 cut(s)	278, 1185, 1263, 1886
Eco47III	AGCGCT	2 cut(s)	106, 1052
Eco53kI	GAGCTC	1 cut(s)	1301
Eco57I	CTGAAG	3 cut(s)	516, 1256, 1848
Eco88I	CYCGRG	1 cut(s)	289
Eco91I	GGTNACC	1 cut(s)	1916
EcoICRI	GAGCTC	1 cut(s)	1301
EcoO109I	RGGNCCY	2 cut(s)	285, 286
EcoO65I	GGTNACC	1 cut(s)	1916
EcoRII	CCWGG	8 cut(s)	280, 445, 1342, 1510, 1601, 1750, 2200, 2293
EcoRV	GATATC	2 cut(s)	635, 825
EcoT14I	CCWWGG	4 cut(s)	1786, 2034, 2325, 2497
EcoT38I	GRGCYC	2 cut(s)	289, 1303
ErhI	CCWWGG	4 cut(s)	1786, 2034, 2325, 2497
FaeI	CATG	8 cut(s)	323, 353, 883, 1234, 1790, 2105, 2182, 2545
FalI	AAGNNNNNCTT	6 cut(s)	1557, 1589, 1863, 1895, 2336, 2368
FaqI	GGGAC	4 cut(s)	1156, 1198, 1663, 1937
FatI	CATG	8 cut(s)	319, 349, 879, 1230, 1786, 2101, 2178, 2541
FauI	CCCGC	1 cut(s)	492
FauNDI	CATATG	2 cut(s)	457, 1279
FbaI	TGATCA	1 cut(s)	760
FblI	GTMKAC	1 cut(s)	743
Fnu4HI	GCNGC	5 cut(s)	1438, 1716, 1902, 2385, 2439
FokI	GGATG	8 cut(s)	84, 799, 1725, 1913, 2090, 2315, 2463, 2558
FriOI	GRGCYC	2 cut(s)	289, 1303
Fsp4HI	GCNGC	5 cut(s)	1438, 1716, 1902, 2385, 2439
GlaI	GCGC	3 cut(s)	106, 1052, 2154
GluI	GCNGC	5 cut(s)	1438, 1716, 1902, 2385, 2439
GsuI	CTGGAG	2 cut(s)	1365, 1734
HaeII	RGCGCY	2 cut(s)	108, 1054
HaeIII	GGCC	5 cut(s)	287, 729, 1374, 1425, 2039
HapII	CCGG	7 cut(s)	253, 270, 290, 585, 873, 1921, 2075
HhaI	GCGC	3 cut(s)	107, 1053, 2155
Hin1II	CATG	8 cut(s)	323, 353, 883, 1234, 1790, 2105, 2182, 2545
Hin6I	GCGC	3 cut(s)	105, 1051, 2153
HinP1I	GCGC	3 cut(s)	105, 1051, 2153
HincII	GTYRAC	3 cut(s)	1114, 1629, 1941
HindII	GTYRAC	3 cut(s)	1114, 1629, 1941
HindIII	AAGCTT	3 cut(s)	765, 1540, 2536
HpaI	GTTAAC	2 cut(s)	1114, 1629
HpaII	CCGG	7 cut(s)	253, 270, 290, 585, 873, 1921, 2075
HphI	GGTGA	2 cut(s)	1079, 1802
Hpy166II	GTNNAC	8 cut(s)	99, 494, 744, 1114, 1379, 1629, 1672, 1941
Hpy188III	TCNNGA	4 cut(s)	374, 1805, 2075, 2222
Hpy8I	GTNNAC	8 cut(s)	99, 494, 744, 1114, 1379, 1629, 1672, 1941
Hpy99I	CGWCG	1 cut(s)	890
HpyAV	CCTTC	8 cut(s)	4, 349, 610, 1231, 1493, 1639, 1983, 2200
HpyCH4III	ACNGT	9 cut(s)	836, 1383, 1585, 1669, 1798, 2089, 2190, 2560, 2581
HpyCH4IV	ACGT	3 cut(s)	808, 888, 1625
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 986, 1715, 1859, 2102, 2159
HpyF3I	CTNAG	7 cut(s)	84, 654, 1338, 1616, 1823, 1935, 2317
HpySE526I	ACGT	3 cut(s)	808, 888, 1625
Hsp92II	CATG	8 cut(s)	323, 353, 883, 1234, 1790, 2105, 2182, 2545
HspAI	GCGC	3 cut(s)	105, 1051, 2153
Kpn2I	TCCGGA	1 cut(s)	2074
Ksp22I	TGATCA	1 cut(s)	760
KspAI	GTTAAC	2 cut(s)	1114, 1629
LmnI	GCTCC	1 cut(s)	1782
Lsp1109I	GCAGC	5 cut(s)	1424, 1727, 1913, 2396, 2450
LweI	GCATC	7 cut(s)	451, 491, 853, 1747, 2149, 2227, 2515
MaeII	ACGT	3 cut(s)	808, 888, 1625
MaeIII	GTNAC	8 cut(s)	855, 1060, 1589, 1790, 1798, 1916, 2089, 2339
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	3 cut(s)	334, 717, 1606
MhlI	GDGCHC	5 cut(s)	150, 289, 1045, 1220, 1303
MlsI	TGGCCA	2 cut(s)	1425, 2039
MluNI	TGGCCA	2 cut(s)	1425, 2039
MlyI	GAGTC	3 cut(s)	607, 2109, 2339
MmeI	TCCRAC	6 cut(s)	312, 362, 372, 674, 714, 2352
Mox20I	TGGCCA	2 cut(s)	1425, 2039
MroI	TCCGGA	1 cut(s)	2074
MscI	TGGCCA	2 cut(s)	1425, 2039
MseI	TTAA	9 cut(s)	27, 780, 1113, 1575, 1628, 1839, 2045, 2379, 2584
MslI	CAYNNNNRTG	2 cut(s)	1128, 1911
Msp20I	TGGCCA	2 cut(s)	1425, 2039
MspA1I	CMGCKG	1 cut(s)	431
MspI	CCGG	7 cut(s)	253, 270, 290, 585, 873, 1921, 2075
MunI	CAATTG	1 cut(s)	1029
Mva1269I	GAATGC	1 cut(s)	1686
MvaI	CCWGG	8 cut(s)	282, 447, 1344, 1512, 1603, 1752, 2202, 2295
MvnI	CGCG	2 cut(s)	669, 1155
MwoI	GCNNNNNNNGC	6 cut(s)	113, 986, 1715, 1859, 2102, 2159
NciI	CCSGG	5 cut(s)	290, 291, 586, 873, 1922
NcoI	CCATGG	1 cut(s)	1786
NdeI	CATATG	2 cut(s)	457, 1279
NheI	GCTAGC	1 cut(s)	548
NlaIII	CATG	8 cut(s)	323, 353, 883, 1234, 1790, 2105, 2182, 2545
NmuCI	GTSAC	4 cut(s)	855, 1060, 1790, 2339
NspI	RCATGY	1 cut(s)	1234
NspV	TTCGAA	2 cut(s)	421, 2016
PasI	CCCWGGG	1 cut(s)	446
PceI	AGGCCT	1 cut(s)	729
PctI	GAATGC	1 cut(s)	1686
PfeI	GAWTC	9 cut(s)	179, 395, 1211, 1457, 1478, 1620, 1697, 2252, 2427
PfoI	TCCNGGA	1 cut(s)	584
PkrI	GCNGC	5 cut(s)	1439, 1717, 1903, 2386, 2440
Ple19I	CGATCG	2 cut(s)	1849, 2058
PleI	GAGTC	3 cut(s)	606, 2109, 2338
PpsI	GAGTC	3 cut(s)	606, 2109, 2338
PshAI	GACNNNNGTC	1 cut(s)	1148
PshBI	ATTAAT	1 cut(s)	27
PsiI	TTATAA	3 cut(s)	897, 1080, 1227
Psp124BI	GAGCTC	1 cut(s)	1303
Psp6I	CCWGG	8 cut(s)	280, 445, 1342, 1510, 1601, 1750, 2200, 2293
PspEI	GGTNACC	1 cut(s)	1916
PspGI	CCWGG	8 cut(s)	280, 445, 1342, 1510, 1601, 1750, 2200, 2293
PspOMI	GGGCCC	1 cut(s)	285
PspPI	GGNCC	6 cut(s)	278, 285, 286, 1185, 1263, 1886
PsuI	RGATCY	3 cut(s)	334, 717, 1606
PvuI	CGATCG	2 cut(s)	1849, 2058
PvuII	CAGCTG	1 cut(s)	431
RsaI	GTAC	8 cut(s)	100, 251, 380, 797, 833, 1447, 1572, 1982
RsaNI	GTAC	8 cut(s)	99, 250, 379, 796, 832, 1446, 1571, 1981
RseI	CAYNNNNRTG	2 cut(s)	1128, 1911
SacI	GAGCTC	1 cut(s)	1303
SaqAI	TTAA	9 cut(s)	27, 780, 1113, 1575, 1628, 1839, 2045, 2379, 2584
SatI	GCNGC	5 cut(s)	1438, 1716, 1902, 2385, 2439
Sau96I	GGNCC	6 cut(s)	278, 285, 286, 1185, 1263, 1886
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	3 cut(s)	607, 2109, 2339
SduI	GDGCHC	5 cut(s)	150, 289, 1045, 1220, 1303
SfaNI	GCATC	7 cut(s)	451, 491, 853, 1747, 2149, 2227, 2515
SfcI	CTRYAG	1 cut(s)	2359
SfuI	TTCGAA	2 cut(s)	421, 2016
SinI	GGWCC	4 cut(s)	278, 1185, 1263, 1886
SmaI	CCCGGG	1 cut(s)	291
SmiMI	CAYNNNNRTG	2 cut(s)	1128, 1911
SmlI	CTYRAG	2 cut(s)	302, 1805
SmoI	CTYRAG	2 cut(s)	302, 1805
SpeI	ACTAGT	1 cut(s)	488
SseBI	AGGCCT	1 cut(s)	729
SsiI	CCGC	4 cut(s)	499, 980, 1153, 1283
SstI	GAGCTC	1 cut(s)	1303
StuI	AGGCCT	1 cut(s)	729
StyI	CCWWGG	4 cut(s)	1786, 2034, 2325, 2497
TaaI	ACNGT	9 cut(s)	836, 1383, 1585, 1669, 1798, 2089, 2190, 2560, 2581
TaiI	ACGT	3 cut(s)	811, 891, 1628
TaqI	TCGA	9 cut(s)	421, 485, 596, 827, 861, 1729, 2016, 2054, 2058
TaqII	GACCGA	1 cut(s)	1202
TatI	WGTACW	3 cut(s)	98, 795, 831
TfiI	GAWTC	9 cut(s)	179, 395, 1211, 1457, 1478, 1620, 1697, 2252, 2427
Tru1I	TTAA	9 cut(s)	27, 780, 1113, 1575, 1628, 1839, 2045, 2379, 2584
Tru9I	TTAA	9 cut(s)	27, 780, 1113, 1575, 1628, 1839, 2045, 2379, 2584
TscAI	CASTG	5 cut(s)	249, 634, 1069, 1918, 2092
TseFI	GTSAC	4 cut(s)	855, 1060, 1790, 2339
TseI	GCWGC	5 cut(s)	1437, 1715, 1901, 2384, 2438
Tsp45I	GTSAC	4 cut(s)	855, 1060, 1790, 2339
TspDTI	ATGAA	8 cut(s)	23, 275, 896, 1071, 2090, 2468, 2530, 2562
TspGWI	ACGGA	1 cut(s)	1381
TspMI	CCCGGG	1 cut(s)	289
TspRI	CASTG	5 cut(s)	249, 634, 1069, 1918, 2092
VpaK11BI	GGWCC	4 cut(s)	278, 1185, 1263, 1886
VspI	ATTAAT	1 cut(s)	27
XapI	RAATTY	2 cut(s)	659, 2512
XbaI	TCTAGA	1 cut(s)	373
XceI	RCATGY	1 cut(s)	1234
XmaI	CCCGGG	1 cut(s)	289
XmiI	GTMKAC	1 cut(s)	743
ZrmI	AGTACT	1 cut(s)	797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.