Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0004716

Physical Location & Seq

Genomic Coordinates Forward (+)

85919902 .. 85925947

Gene Structure 6046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG508600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGGAAATGAAGGGTTTTGGGTCGATTGATATGTCATCTGTGTTTGTGATTTTTCTGGTATGTGTATGTGGATGTGGTTTGGCTGAGGGTAAGGAGTGTACAAACACTGTTCATCCTGGGATGGCATCACATACTTTACGGTTTGCGCTTTTATCTTCCAATAATGAAAGTTTGAAGAAGGAGATGTTCTCACACTACCACGTGACACCAAGTGATGATATTGCTTGGTTGAATTTGCTCCCAAGAAAGATATTGAGGGAGGAAGATGAATATGAGTGGTCAGTGCTGTACCGGAAGATGAAAAACTCCGCTGGTGGTTCTGAGCCCCCCGGAGGTTTTCTCAAGGAAGTGTCATTGCATGATGTGAGGTTGGATCCAACTTCACAACATGGGAAGGCACAGCAAACAAATCTAGAGTACCTGTTGATGTTGGATTCGGATAGTTTAGTTTGGAGCTTTCGAAAGACAGCTGGTTTAGAAACCCCTGGGGCACCATATGATGCTGAAGGTTCGTGGGAGGCATCGACTGGTGAATTGCGGGGTCATTTTGTAGGGCATTATTTGAGTGCTTCAGCAATGATGTGGGCTAGCACTCATAATGATACTCTCAAAGAGAAGATGTCTGGGATTGTGTCAAGTCTCTCTCTTTGTCAGAAGGAAATTGGCAGTGGATATCTTTCGGCCTTTCCAACTGAGGAATTTGATCGCTTTGAAGCTATTACACCTGTCTGGGCTCCTTATTATACCATTCACAAGATCTTGGCAGGCCTGTTTGATCAGTATACACTTGCTGGTAGTGATCAAGCTTTTAATATGATGAAATGGATGGTTGATTACTTTTACAAACGTGTTCAGAATGTGATATCGAAGTACAGTATAGCACGCCATTATCTGTCACTCAATGAAGAAACTGGTGGCATGAATGACATTCTTTATAAGTTATATGCTATCACGGGAGATACAAAGCATTTATTGTTGGCTCATCTTTTTGACAAACCCTGCTTTCTAGGAGTGTTGGCAGTGCAGGCTGATGACATATCTGGTTTTCACACCAACACGCATATTCCAGTTGTCATTGGTGCTCAAAAGCGGTATGAAGTCACTGGTGATCCACTTTATAAGGAAATGGGGATTTTCTTTATGGACATGGTTAACTCTTCTCACAGCTATGCAACAGGAGGGACATCAGTGAGCGAGTTTTGGTCAGACCCTAAAAGATTGGCGGCCACTCTACAATCAGAGAATGAGGAATCGTGCACAACTTATAACATGCTGAAGGTCTCTCGCAACCTTTTTAGATGGACCAAAGAAACAGCATATGCGGATTATTACGAGCGAGCTCTAACAAATGGTGTGCTAGGTATCCAAAGAGGAACTGAGCCTGGAGTCATGATCTACATGCTCCCACTAGGTCGTGGACAGTCCAAGGCCAAGAGTTATCATGGTTGGGGATCACCATTTGGCAATTTCTGGTGTTGTTATGGCACTGAGGAAGGAGAAACTCCTGGTCTATACATTATCCAGTATATATCAAGCTTGCTTGATTGGAAATCTGGGCAAGTCGTACTTGATCAGACAGTTGATAACATCAATTCCTGGGATCCTTACCTTAGAATCACGTTAACATTTTCTTCAACGAAGGGTACGGGAAAATCATCTACCTTGAACTTGCGAATGCCAATTTGGACTGATTCAGATGGTGCAAATGCAGCATTGAATGGTCGGAGTCTGCAGCCATCAGCTCCAGGTAGTTTCTTACCAATCGCAAATAAATGGAGCCATGGTGACACAGTAACTCTTCAGCTACCCCTTACTCTGAGAACAGAAGCTATTAAAGATGATCGGACAGAGTATGCTTCACTCCAAGCAATTCTTTATGGTCCAGTTCTGCTTGCGGCTCATACTAGTGGTAATTGGGACCTCCAAACCAAGTCCAACTCCCTTTCAGACTGGATAACTCCAATCCCTTCCTCGTACAATAACTATTTGGTTTCTTTCTCCCAAGAGTACAAAAACTCTACTTTTGTCTTGGCCAATTTAGACCAGTCAATTGAACTAGACAACTTTCCAGAAGCAGGCACTGCTGCTGCTGTTCATGCCACTTTCAGACTCATTTTAGATGACTTGTCAACAAAAGTTCCCAAAGCGCAAGACGCTATTGGTAAATCAGTCATGCTAGAACTGTTTGATCTTCCTGGGAAGGTTCTTGGGCATCAAGGGAAAGACAAGAACCTTGTGATAGCAGATTCTTCAAGTAGCAAGGACAACATAGTTTTTCGCTTGGTTCCAGGTTTGGATGGAAAGAATGCATCGACCTCCTTGGAATCAGAAAGTGACAATGGTTGCTTTGTGTATAGCTCGGAGTTGGAGGTTAATGCACCCTTGAAGCTCGGTTGCAATTCAGAATCGTCAAACGATGGATTCAAACTGGCAGCCAGCTTTGTAATGAAGAGTGGAATAAGTCAGTATCATCCTATTAGCTTTGTTGCCCAAGGGGAGCATAGGAATTTTCTTCTACAACCATTGTCAAGCTTCATGGATGAATTTTATACTGTCTATCTTAACATTACAACTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AbfB Glyco_hydro_127

Protein Analysis

859

Amino Acids

95.34

Weight (kDa)

5.4

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-AFase-like_GH127_cat	PF07944	121 - 496	3.5e-104	Beta-L-arabinofuranosidase, GH127 catalytic domain
Glyco_hydro127M	PF20736	504 - 604	4.2e-15	Beta-L-arabinofuranosidase, GH127 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12950 AT5G12960
fragaria_vesca	FvH4_3g43250 FvH4_3g43250 FvH4_3g43250
malus_domestica	MD03G1023400.v1.1 MD11G1028500.v1.1
prunus_persica	Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1
pyrus_communis	pycom03g02000 pycom11g02200
rosa_chinensis	RchiOBHm_Chr5g0077301 RchiOBHm_Chr5g0077311
rosa_laevigata	RLG00000002632 RLG00000036683 RLG00000036684
rosa_multiflora	Rmu_sc0000433.1_g000041
rosa_roxburghii	Rroxscaffold_1G00004600 Rroxscaffold_1G00004670
rosa_rugosa	Rorug05G0453600
rosa_samantha	Rh5AG508600 Rh5AG508700 Rh5BG529700 Rh5BG529800 Rh5DG542300 Rh5DG542400
rosa_wichuraiana	Rw5G046870 Rw5G046880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	936, 1119, 1266
AccB1I	GGYRCC	1 cut(s)	490
AccI	GTMKAC	1 cut(s)	782
AciI	CCGC	6 cut(s)	309, 538, 1090, 1223, 1322, 1895
AclWI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1595, 1608
AcoI	YGGCCR	2 cut(s)	1224, 2031
AcsI	RAATTY	4 cut(s)	232, 698, 2506, 2543
AcuI	CTGAAG	4 cut(s)	525, 555, 1295, 1784
AcvI	CACGTG	1 cut(s)	202
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	8 cut(s)	100, 290, 419, 872, 1566, 1645, 1976, 2009
AfiI	CCNNNNNNNGG	2 cut(s)	332, 2075
AflIII	ACRYGT	1 cut(s)	847
AhlI	ACTAGT	1 cut(s)	1904
AjnI	CCWGG	8 cut(s)	115, 484, 1381, 1504, 1595, 1744, 2194, 2287
AjuI	GAANNNNNNNTTGG	2 cut(s)	1666, 1698
Alw21I	GWGCWC	3 cut(s)	1084, 1259, 1342
Alw26I	GTCTC	2 cut(s)	644, 1285
Alw44I	GTGCAC	1 cut(s)	1255
AlwI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1595, 1608
AlwNI	CAGNNNCTG	1 cut(s)	2081
AoxI	GGCC	5 cut(s)	681, 766, 1224, 1428, 2031
ApaLI	GTGCAC	1 cut(s)	1255
ApeKI	GCWGC	5 cut(s)	1709, 1732, 2084, 2087, 2432
ApoI	RAATTY	4 cut(s)	232, 698, 2506, 2543
AspLEI	GCGC	2 cut(s)	148, 2149
AspS9I	GGNCC	3 cut(s)	1302, 1880, 1918
AsuC2I	CCSGG	1 cut(s)	330
AsuHPI	GGTGA	4 cut(s)	542, 1118, 1446, 1796
AsuII	TTCGAA	1 cut(s)	460
AsuNHI	GCTAGC	1 cut(s)	587
AvaII	GGWCC	3 cut(s)	1302, 1880, 1918
BaeGI	GKGCMC	2 cut(s)	493, 1259
BalI	TGGCCA	1 cut(s)	2033
BamHI	GGATCC	2 cut(s)	373, 1600
BanI	GGYRCC	1 cut(s)	490
BanII	GRGCYC	3 cut(s)	327, 736, 1342
BbrPI	CACGTG	1 cut(s)	202
Bbv12I	GWGCWC	3 cut(s)	1084, 1259, 1342
BbvCI	CCTCAGC	1 cut(s)	84
BbvI	GCAGC	5 cut(s)	1721, 1744, 2071, 2074, 2444
BccI	CCATC	7 cut(s)	115, 820, 1293, 1691, 1744, 2291, 2411
BciT130I	CCWGG	8 cut(s)	117, 486, 1383, 1506, 1597, 1746, 2196, 2289
BciVI	GTATCC	1 cut(s)	1373
BclI	TGATCA	3 cut(s)	775, 799, 1570
BcnI	CCSGG	1 cut(s)	330
BcoDI	GTCTC	2 cut(s)	644, 1285
BcuI	ACTAGT	1 cut(s)	1904
BfaI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1905, 2057, 2177
BfmI	CTRYAG	1 cut(s)	1730
BfuI	GTATCC	1 cut(s)	1373
BglII	AGATCT	1 cut(s)	756
BisI	GCNGC	7 cut(s)	1224, 1710, 1733, 1896, 2085, 2088, 2433
BlsI	GCNGC	7 cut(s)	1225, 1711, 1734, 1897, 2086, 2089, 2434
Bme1390I	CCNGG	9 cut(s)	117, 330, 486, 1383, 1506, 1597, 1746, 2196, 2289
Bme18I	GGWCC	3 cut(s)	1302, 1880, 1918
BmgT120I	GGNCC	3 cut(s)	1302, 1880, 1918
BmiI	GGNNCC	7 cut(s)	375, 492, 735, 1602, 1778, 1919, 2286
BmrFI	CCNGG	9 cut(s)	117, 330, 486, 1383, 1506, 1597, 1746, 2196, 2289
BmsI	GCATC	5 cut(s)	134, 490, 530, 2221, 2318
BmtI	GCTAGC	1 cut(s)	591
BplI	GAGNNNNNCTC	4 cut(s)	173, 205, 324, 356
BpmI	CTGGAG	2 cut(s)	1404, 1728
Bpu10I	CCTNAGC	1 cut(s)	84
Bpu14I	TTCGAA	1 cut(s)	460
BpuEI	CTTGAG	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	330
BsaAI	YACGTR	1 cut(s)	202
BsaI	GGTCTC	1 cut(s)	1285
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	2 cut(s)	1768, 1798
Bsc4I	CCNNNNNNNGG	2 cut(s)	332, 2075
Bse1I	ACTGG	9 cut(s)	532, 916, 1067, 1108, 1522, 1883, 1955, 2044, 2433
Bse3DI	GCAATG	2 cut(s)	353, 582
BseBI	CCWGG	8 cut(s)	117, 486, 1383, 1506, 1597, 1746, 2196, 2289
BseGI	GGATG	7 cut(s)	77, 112, 126, 831, 2302, 2470, 2545
BseLI	CCNNNNNNNGG	2 cut(s)	332, 2075
BseMI	GCAATG	2 cut(s)	353, 582
BseMII	CTCAG	6 cut(s)	75, 312, 684, 1368, 1479, 1808
BseNI	ACTGG	9 cut(s)	532, 916, 1067, 1108, 1522, 1883, 1955, 2044, 2433
BseSI	GKGCMC	2 cut(s)	493, 1259
BseXI	GCAGC	5 cut(s)	1721, 1744, 2071, 2074, 2444
BsgI	GTGCAG	1 cut(s)	1043
BshFI	GGCC	5 cut(s)	683, 768, 1226, 1430, 2033
BshNI	GGYRCC	1 cut(s)	490
BsiHKAI	GWGCWC	3 cut(s)	1084, 1259, 1342
BsiSI	CCGG	2 cut(s)	292, 330
BslFI	GGGAC	2 cut(s)	1195, 1931
BslI	CCNNNNNNNGG	2 cut(s)	332, 2075
BsmAI	GTCTC	2 cut(s)	644, 1285
BsmFI	GGGAC	2 cut(s)	1195, 1931
BsmI	GAATGC	2 cut(s)	1680, 2311
BsnI	GGCC	5 cut(s)	683, 768, 1226, 1430, 2033
Bso31I	GGTCTC	1 cut(s)	1285
Bsp119I	TTCGAA	1 cut(s)	460
Bsp1286I	GDGCHC	6 cut(s)	327, 493, 736, 1084, 1259, 1342
Bsp1407I	TGTACA	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	1780
BspACI	CCGC	6 cut(s)	309, 538, 1090, 1223, 1322, 1895
BspANI	GGCC	5 cut(s)	683, 768, 1226, 1430, 2033
BspCNI	CTCAG	6 cut(s)	76, 313, 685, 1369, 1480, 1809
BspHI	TCATGA	1 cut(s)	1389
BspLI	GGNNCC	7 cut(s)	375, 492, 735, 1602, 1778, 1919, 2286
BspMAI	CTGCAG	1 cut(s)	1734
BspOI	GCTAGC	1 cut(s)	591
BspPI	GGATC	6 cut(s)	368, 381, 1103, 1459, 1595, 1608
BspT104I	TTCGAA	1 cut(s)	460
BspT107I	GGYRCC	1 cut(s)	490
BspTNI	GGTCTC	1 cut(s)	1285
BsrDI	GCAATG	2 cut(s)	353, 582
BsrGI	TGTACA	1 cut(s)	98
BsrI	ACTGG	9 cut(s)	532, 916, 1067, 1108, 1522, 1883, 1955, 2044, 2433
BssNAI	GTATAC	1 cut(s)	783
BssT1I	CCWWGG	4 cut(s)	1425, 1780, 2319, 2491
Bst1107I	GTATAC	1 cut(s)	783
Bst2UI	CCWGG	8 cut(s)	117, 486, 1383, 1506, 1597, 1746, 2196, 2289
Bst4CI	ACNGT	9 cut(s)	109, 141, 875, 1422, 1579, 1792, 2184, 2554, 2575
Bst6I	CTCTTC	3 cut(s)	1162, 1803, 2444
BstAPI	GCANNNNNTGC	1 cut(s)	2081
BstAUI	TGTACA	1 cut(s)	98
BstBAI	YACGTR	1 cut(s)	202
BstBI	TTCGAA	1 cut(s)	460
BstC8I	GCNNGC	9 cut(s)	589, 766, 883, 1026, 1338, 1538, 1893, 2077, 2437
BstDEI	CTNAG	7 cut(s)	84, 321, 693, 1377, 1488, 1610, 1817
BstDSI	CCRYGG	1 cut(s)	1780
BstF5I	GGATG	7 cut(s)	77, 112, 126, 831, 2302, 2470, 2545
BstHHI	GCGC	2 cut(s)	148, 2149
BstMAI	GTCTC	2 cut(s)	644, 1285
BstMWI	GCNNNNNNNGC	5 cut(s)	1025, 1709, 2081, 2096, 2153
BstNI	CCWGG	8 cut(s)	117, 486, 1383, 1506, 1597, 1746, 2196, 2289
BstNSI	RCATGY	2 cut(s)	1273, 1402
BstSCI	CCNGG	9 cut(s)	115, 328, 484, 1381, 1504, 1595, 1744, 2194, 2287
BstSFI	CTRYAG	1 cut(s)	1730
BstSLI	GKGCMC	2 cut(s)	493, 1259
BstV1I	GCAGC	5 cut(s)	1721, 1744, 2071, 2074, 2444
BstX2I	RGATCY	3 cut(s)	373, 756, 1600
BstYI	RGATCY	3 cut(s)	373, 756, 1600
BstZ17I	GTATAC	1 cut(s)	783
BsuI	GTATCC	1 cut(s)	1373
BsuRI	GGCC	5 cut(s)	683, 768, 1226, 1430, 2033
BtgI	CCRYGG	1 cut(s)	1780
BtsCI	GGATG	7 cut(s)	77, 112, 126, 831, 2302, 2470, 2545
BtsI	GCAGTG	3 cut(s)	673, 1026, 2079
BtsIMutI	CAGTG	8 cut(s)	105, 288, 673, 1026, 1101, 1194, 1485, 2079
Cac8I	GCNNGC	9 cut(s)	589, 766, 883, 1026, 1338, 1538, 1893, 2077, 2437
CaiI	CAGNNNCTG	1 cut(s)	2081
CciI	TCATGA	1 cut(s)	1389
CfoI	GCGC	2 cut(s)	148, 2149
Cfr13I	GGNCC	3 cut(s)	1302, 1880, 1918
CseI	GACGC	1 cut(s)	2162
Csp6I	GTAC	8 cut(s)	99, 289, 418, 871, 1565, 1644, 1975, 2008
CviQI	GTAC	8 cut(s)	99, 289, 418, 871, 1565, 1644, 1975, 2008
DdeI	CTNAG	7 cut(s)	84, 321, 693, 1377, 1488, 1610, 1817
DraIII	CACNNNGTG	1 cut(s)	212
EaeI	YGGCCR	2 cut(s)	1224, 2031
Eam1104I	CTCTTC	3 cut(s)	1162, 1803, 2444
EarI	CTCTTC	3 cut(s)	1162, 1803, 2444
Ecl136II	GAGCTC	1 cut(s)	1340
Eco130I	CCWWGG	4 cut(s)	1425, 1780, 2319, 2491
Eco147I	AGGCCT	1 cut(s)	768
Eco24I	GRGCYC	3 cut(s)	327, 736, 1342
Eco31I	GGTCTC	1 cut(s)	1285
Eco32I	GATATC	2 cut(s)	674, 864
Eco47I	GGWCC	3 cut(s)	1302, 1880, 1918
Eco53kI	GAGCTC	1 cut(s)	1340
Eco57I	CTGAAG	4 cut(s)	525, 555, 1295, 1784
Eco72I	CACGTG	1 cut(s)	202
EcoICRI	GAGCTC	1 cut(s)	1340
EcoO109I	RGGNCCY	1 cut(s)	1918
EcoRII	CCWGG	8 cut(s)	115, 484, 1381, 1504, 1595, 1744, 2194, 2287
EcoRV	GATATC	2 cut(s)	674, 864
EcoT14I	CCWWGG	4 cut(s)	1425, 1780, 2319, 2491
EcoT22I	ATGCAT	1 cut(s)	2311
EcoT38I	GRGCYC	3 cut(s)	327, 736, 1342
ErhI	CCWWGG	4 cut(s)	1425, 1780, 2319, 2491
FalI	AAGNNNNNCTT	4 cut(s)	1551, 1583, 1857, 1889
FaqI	GGGAC	2 cut(s)	1195, 1931
FauI	CCCGC	1 cut(s)	531
FauNDI	CATATG	2 cut(s)	496, 1318
FbaI	TGATCA	3 cut(s)	775, 799, 1570
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	7 cut(s)	1224, 1710, 1733, 1896, 2085, 2088, 2433
FokI	GGATG	7 cut(s)	84, 99, 133, 838, 2309, 2457, 2552
FriOI	GRGCYC	3 cut(s)	327, 736, 1342
Fsp4HI	GCNGC	7 cut(s)	1224, 1710, 1733, 1896, 2085, 2088, 2433
FspBI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1905, 2057, 2177
GlaI	GCGC	2 cut(s)	147, 2148
GluI	GCNGC	7 cut(s)	1224, 1710, 1733, 1896, 2085, 2088, 2433
GsuI	CTGGAG	2 cut(s)	1404, 1728
HaeIII	GGCC	5 cut(s)	683, 768, 1226, 1430, 2033
HapII	CCGG	2 cut(s)	292, 330
HgaI	GACGC	1 cut(s)	2162
HhaI	GCGC	2 cut(s)	148, 2149
Hin6I	GCGC	2 cut(s)	146, 2147
HinP1I	GCGC	2 cut(s)	146, 2147
HincII	GTYRAC	3 cut(s)	1153, 1623, 2130
HindII	GTYRAC	3 cut(s)	1153, 1623, 2130
HindIII	AAGCTT	3 cut(s)	804, 1534, 2530
HpaI	GTTAAC	2 cut(s)	1153, 1623
HpaII	CCGG	2 cut(s)	292, 330
HphI	GGTGA	4 cut(s)	542, 1118, 1446, 1796
Hpy166II	GTNNAC	7 cut(s)	99, 783, 1153, 1257, 1418, 1623, 2130
Hpy188III	TCNNGA	3 cut(s)	413, 1390, 2069
Hpy8I	GTNNAC	7 cut(s)	99, 783, 1153, 1257, 1418, 1623, 2130
HpyCH4III	ACNGT	9 cut(s)	109, 141, 875, 1422, 1579, 1792, 2184, 2554, 2575
HpyCH4IV	ACGT	3 cut(s)	201, 847, 1619
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1025, 1709, 2081, 2096, 2153
HpyF3I	CTNAG	7 cut(s)	84, 321, 693, 1377, 1488, 1610, 1817
HpySE526I	ACGT	3 cut(s)	201, 847, 1619
HspAI	GCGC	2 cut(s)	146, 2147
Ksp22I	TGATCA	3 cut(s)	775, 799, 1570
KspAI	GTTAAC	2 cut(s)	1153, 1623
LmnI	GCTCC	7 cut(s)	243, 453, 739, 1407, 1747, 1776, 2497
Lsp1109I	GCAGC	5 cut(s)	1721, 1744, 2071, 2074, 2444
LweI	GCATC	5 cut(s)	134, 490, 530, 2221, 2318
MaeI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1905, 2057, 2177
MaeII	ACGT	3 cut(s)	201, 847, 1619
MaeIII	GTNAC	6 cut(s)	202, 894, 1099, 1784, 1792, 2333
MfeI	CAATTG	1 cut(s)	2049
MflI	RGATCY	3 cut(s)	373, 756, 1600
MhlI	GDGCHC	6 cut(s)	327, 493, 736, 1084, 1259, 1342
MlsI	TGGCCA	1 cut(s)	2033
MluNI	TGGCCA	1 cut(s)	2033
MlyI	GAGTC	3 cut(s)	1395, 1735, 2103
MmeI	TCCRAC	7 cut(s)	351, 401, 411, 713, 1703, 1959, 2346
Mox20I	TGGCCA	1 cut(s)	2033
Mph1103I	ATGCAT	1 cut(s)	2311
MscI	TGGCCA	1 cut(s)	2033
MseI	TTAA	6 cut(s)	810, 1152, 1622, 1833, 2373, 2562
MslI	CAYNNNNRTG	2 cut(s)	1167, 1905
Msp20I	TGGCCA	1 cut(s)	2033
MspA1I	CMGCKG	2 cut(s)	311, 470
MspI	CCGG	2 cut(s)	292, 330
MspR9I	CCNGG	9 cut(s)	117, 330, 486, 1383, 1506, 1597, 1746, 2196, 2289
MunI	CAATTG	1 cut(s)	2049
Mva1269I	GAATGC	2 cut(s)	1680, 2311
MvaI	CCWGG	8 cut(s)	117, 486, 1383, 1506, 1597, 1746, 2196, 2289
MwoI	GCNNNNNNNGC	5 cut(s)	1025, 1709, 2081, 2096, 2153
NciI	CCSGG	1 cut(s)	330
NcoI	CCATGG	1 cut(s)	1780
NdeI	CATATG	2 cut(s)	496, 1318
NheI	GCTAGC	1 cut(s)	587
NlaIV	GGNNCC	7 cut(s)	375, 492, 735, 1602, 1778, 1919, 2286
NmuCI	GTSAC	5 cut(s)	202, 894, 1099, 1784, 2333
NsiI	ATGCAT	1 cut(s)	2311
NspI	RCATGY	2 cut(s)	1273, 1402
NspV	TTCGAA	1 cut(s)	460
PagI	TCATGA	1 cut(s)	1389
PasI	CCCWGGG	1 cut(s)	485
PceI	AGGCCT	1 cut(s)	768
PctI	GAATGC	2 cut(s)	1680, 2311
PfeI	GAWTC	8 cut(s)	434, 1250, 1614, 1691, 2246, 2324, 2405, 2421
PkrI	GCNGC	7 cut(s)	1225, 1711, 1734, 1897, 2086, 2089, 2434
PleI	GAGTC	3 cut(s)	1394, 1734, 2103
PmaCI	CACGTG	1 cut(s)	202
PmlI	CACGTG	1 cut(s)	202
PpsI	GAGTC	3 cut(s)	1394, 1734, 2103
Ppu21I	YACGTR	1 cut(s)	202
PpuMI	RGGWCCY	1 cut(s)	1918
PsiI	TTATAA	3 cut(s)	936, 1119, 1266
Psp124BI	GAGCTC	1 cut(s)	1342
Psp5II	RGGWCCY	1 cut(s)	1918
Psp6I	CCWGG	8 cut(s)	115, 484, 1381, 1504, 1595, 1744, 2194, 2287
PspCI	CACGTG	1 cut(s)	202
PspGI	CCWGG	8 cut(s)	115, 484, 1381, 1504, 1595, 1744, 2194, 2287
PspN4I	GGNNCC	7 cut(s)	375, 492, 735, 1602, 1778, 1919, 2286
PspPI	GGNCC	3 cut(s)	1302, 1880, 1918
PspPPI	RGGWCCY	1 cut(s)	1918
PstI	CTGCAG	1 cut(s)	1734
PstNI	CAGNNNCTG	1 cut(s)	2081
PsuI	RGATCY	3 cut(s)	373, 756, 1600
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	8 cut(s)	100, 290, 419, 872, 1566, 1645, 1976, 2009
RsaNI	GTAC	8 cut(s)	99, 289, 418, 871, 1565, 1644, 1975, 2008
RseI	CAYNNNNRTG	2 cut(s)	1167, 1905
SacI	GAGCTC	1 cut(s)	1342
SaqAI	TTAA	6 cut(s)	810, 1152, 1622, 1833, 2373, 2562
SatI	GCNGC	7 cut(s)	1224, 1710, 1733, 1896, 2085, 2088, 2433
Sau96I	GGNCC	3 cut(s)	1302, 1880, 1918
SchI	GAGTC	3 cut(s)	1395, 1735, 2103
ScrFI	CCNGG	9 cut(s)	117, 330, 486, 1383, 1506, 1597, 1746, 2196, 2289
SduI	GDGCHC	6 cut(s)	327, 493, 736, 1084, 1259, 1342
SfaNI	GCATC	5 cut(s)	134, 490, 530, 2221, 2318
SfcI	CTRYAG	1 cut(s)	1730
SfuI	TTCGAA	1 cut(s)	460
SinI	GGWCC	3 cut(s)	1302, 1880, 1918
SmiMI	CAYNNNNRTG	2 cut(s)	1167, 1905
SmlI	CTYRAG	1 cut(s)	341
SmoI	CTYRAG	1 cut(s)	341
SpeI	ACTAGT	1 cut(s)	1904
SseBI	AGGCCT	1 cut(s)	768
SsiI	CCGC	6 cut(s)	309, 538, 1090, 1223, 1322, 1895
SspMI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1905, 2057, 2177
SstI	GAGCTC	1 cut(s)	1342
StuI	AGGCCT	1 cut(s)	768
StyD4I	CCNGG	9 cut(s)	115, 328, 484, 1381, 1504, 1595, 1744, 2194, 2287
StyI	CCWWGG	4 cut(s)	1425, 1780, 2319, 2491
TaaI	ACNGT	9 cut(s)	109, 141, 875, 1422, 1579, 1792, 2184, 2554, 2575
TaiI	ACGT	3 cut(s)	204, 850, 1622
TaqI	TCGA	5 cut(s)	23, 460, 524, 866, 2312
TatI	WGTACW	3 cut(s)	98, 870, 2007
TauI	GCSGC	2 cut(s)	1226, 1898
TfiI	GAWTC	8 cut(s)	434, 1250, 1614, 1691, 2246, 2324, 2405, 2421
Tru1I	TTAA	6 cut(s)	810, 1152, 1622, 1833, 2373, 2562
Tru9I	TTAA	6 cut(s)	810, 1152, 1622, 1833, 2373, 2562
TscAI	CASTG	8 cut(s)	112, 288, 673, 1026, 1108, 1194, 1492, 2086
TseFI	GTSAC	5 cut(s)	202, 894, 1099, 1784, 2333
TseI	GCWGC	5 cut(s)	1709, 1732, 2084, 2087, 2432
Tsp45I	GTSAC	5 cut(s)	202, 894, 1099, 1784, 2333
TspRI	CASTG	8 cut(s)	112, 288, 673, 1026, 1108, 1194, 1492, 2086
VneI	GTGCAC	1 cut(s)	1255
VpaK11BI	GGWCC	3 cut(s)	1302, 1880, 1918
XapI	RAATTY	4 cut(s)	232, 698, 2506, 2543
XbaI	TCTAGA	1 cut(s)	412
XceI	RCATGY	2 cut(s)	1273, 1402
XmiI	GTMKAC	1 cut(s)	782
XspI	CTAG	8 cut(s)	413, 588, 1007, 1358, 1409, 1905, 2057, 2177
Zsp2I	ATGCAT	1 cut(s)	2311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.