Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004716

Physical Location & Seq

Genomic Coordinates Reverse (-)

1508024 .. 1513160

Gene Structure 5137 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g02000.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGAAAATGAAGAGCTTTGTGTTTATTGATTTGTTAGCTGTGTTTGTAATCCTTCTTCTATGTGGTTTTGCTGTGGGGAAGGAATGTACAAACATCCCTACTCAGCTTTCATCACATACTTACCGGTATGACCTCTTATCTTCCCACAATGAGACACTCAAGGAGGAAATATTCTCATACTACCACTTGATACCTACCGATGATTCGGCGTGGATGGATTTGCTCCCAAGAAAGATACTGAGGGAAGAAGATGAAGTTGAATGGGGAATGATGTACCGGAAAATGAAAACTTCTGGCGGTTTGGAGGCCTCCGGAGGTTTTCTTAAGGAAGTGCCATTGCATGATGTGAGGTTGCATCCAACTTCACAACATGGAAGGGCACAGCAAACAAATTTGGAGTACTTATTGATGTTGGATTCAGATAGTTTAATTTGGAACTTTCGTCAGACAGCGGGTTTGCCAACCCCTGGAACACCATATAAGGGTTGGGAGGACCCTACTTGTGAGCTTCGGGGTCATTTCGTAGGGCATTACTTGAGTGCAACAGCACAAATGTGGGCTAGCACTCATAATCAGATCCTCAAAGATAAAATGTCTGCAATAGTGGACAGTCTCTTCCTTTGTCAGAAAAAAATTGGCAGCGGATATCTTTCTGCCTTTCCATCGGAAGAATTTGATCGATTTGAAGCTGTTAAGCCTGTCTGGGCTCCTTATTACACCATTCACAAGATATTGGCAGGCCTATTGGATCAGTATATATTTGCTGATAATGCTCAAGCGTTAAAAATTGTCACTTGGATGGTTGAGTACTTTTACAACCGTGTTCAGAATGTGATATCTAAGTACAGTGTAGAAAGGCATTATACTGCACTCAATGAAGAAACTGGTGGGATGAATGATGTTCTTTATAAGCTATATGCTATAACGGGAGATGCAAAGCATTTATTGTTGGCTCATCTTTTCGACAAACCATGCTTTCTGGGAGTGCTGGCAGTGCAGGCTGATGACATATCTGGTTTTCACGCTAACACGCATATCCCAATTGTTATCGGTGCTCAAATGCGATATGAAGTCACTGGTGATCGATCTCGAACCTTTCAGGAAATGAGTACTTTCTTTATGAACGTTGTTAACTCTTCTCACAGCTATGCAACCGGAGGGACATCAGCGAGCGAGTTCTGGTCCAACCCTAAAAGGTTGGCGAGCACTCTACAAACTGAGAACGAGGAGTCGTGCACAACTTATAACATGCTGAAGGTCTCTCGCCACCTGTTTAGATGGACCAAAGAAACAGCATATGCGGATTATTACGAGCGAGCTCTGACAAATGGTGTGCTAGGCATCCAAAGAGGGACAGAGCCTGGAGTCATGATTTACATGCTTCCACTGGGTCGTGGAAATTCCAAGGCCAGAAGCTACCATGGTTGGGGAAAACCCTTCGAGTCTTTCTGGTGCTGCTATGGCACTGGTATTGAATCATTCTCAAAGCTAGGAGATTCCATATATTTTGAAGAGGAGAAAGAAGCTCCTGCTCTTTACATTATCCAGTATATCTCAAGCTTCCTTGATTGGAAATCCGGACAAATAGTGGTTAATCAGACAGTTGATCATGTCAATTCATGGGATCCTTACCTTAGAGTCGCGCAAACATTTTCTTCAGCGGAGGGGACAGGCAAATCATCTACGTTGAACTTGCGAATTCCAATTTGGACAGATTCAAATGGTGCAAATGCAGCATTGAATGGTCAAAGTCTGAGTGTTCCAGCTCCAGGTAGTTTCCTAACAGTCACAAGAAAATGGAGTCCTGGTGACATTTTGACCCTTGAGCTGCCCATTAGTCTAAGAACAGAGGCTATTAAAGATGATCGGCCTGAGTACGCTTCGGTTCAAGCAATTCTTTATGGTCCGTATCTGCTTGCGGCTCATACGAGTGGTAACTGGGACATTAATACTGGCTCTGTTGGGTCTCTTTCGGACTGGATAACTCCAATCCCTTCCTCATATAATAACTTCTTGGTTTCTTTATCCCAAGAGTCCGGAAGCTCAAGTTTCGTCATAGCCAACTTAAACGAATCAATTGGATTGGACGAGGTTCCTGAAACTGGCACTGATGCTGCTAATCATGCCACTTTCAGACTCGTTATAAGTGACATGTCCACAGAACTCTCTTCAGCGAATGATGTTATAGGCAAATCAATCGTGCTAGAACTGTTTGATCTTCCAGGAAAGGTTGTGGTGCAGCAAGGGAAAGACGAGAACCTCGGTATAGCAGACATGTCCACTAGTAGGGACACTTCAGTTTTTCGTTTGGTTCAAGGTTTGGATGGAAGGAACACCACGGTATCCTTAGAGTCCGAAAGCAATGAAGGTTGCTATGTGTATAGTGAAAAAGTTGAGGCGAATGCAGACTTGAAGCTCGTCTGCAGTTCAGAGTCATCTAGGGCTGGATTCAATCAGGCAGCCAGCTTTGTGATGACCAGTGGAATAAATCAGTATCATCCTATCAGCTTTGTTGCTAAGGGGACACCAAGGAACTTTCTTCTAGCGCCATTGTCGACCTTCAAGGACGAATCTTATTCCGCTTATCTCAACATTATGACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AbfB Glyco_hydro_127

Protein Analysis

868

Amino Acids

96.69

Weight (kDa)

5.34

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12950 AT5G12960
fragaria_vesca	FvH4_3g43250 FvH4_3g43250 FvH4_3g43250
malus_domestica	MD03G1023400.v1.1 MD11G1028500.v1.1
prunus_persica	Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1 Prupe.6G022600_v2.0.a1
pyrus_communis	pycom03g02000 pycom11g02200
rosa_chinensis	RchiOBHm_Chr5g0077301 RchiOBHm_Chr5g0077311
rosa_laevigata	RLG00000002632 RLG00000036683 RLG00000036684
rosa_multiflora	Rmu_sc0000433.1_g000041
rosa_roxburghii	Rroxscaffold_1G00004600 Rroxscaffold_1G00004670
rosa_rugosa	Rorug05G0453600
rosa_samantha	Rh5AG508600 Rh5AG508700 Rh5BG529700 Rh5BG529800 Rh5DG542300 Rh5DG542400
rosa_wichuraiana	Rw5G046870 Rw5G046880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	909, 1245, 2144
AccB7I	CCANNNNNTGG	1 cut(s)	467
AccI	GTMKAC	1 cut(s)	2555
AccII	CGCG	1 cut(s)	1643
AccIII	TCCGGA	3 cut(s)	311, 1577, 2036
AciI	CCGC	7 cut(s)	297, 452, 642, 1301, 1661, 1919, 2580
AclI	AACGTT	1 cut(s)	1125
AclWI	GGATC	4 cut(s)	571, 756, 1619, 1632
AcsI	RAATTY	4 cut(s)	391, 671, 1399, 1698
AcuI	CTGAAG	4 cut(s)	1274, 1641, 2154, 2280
AfaI	GTAC	7 cut(s)	88, 275, 401, 809, 845, 1111, 1877
AfiI	CCNNNNNNNGG	6 cut(s)	467, 482, 1426, 1769, 2102, 2286
AflII	CTTAAG	1 cut(s)	323
AflIII	ACRYGT	2 cut(s)	2151, 2274
AgeI	ACCGGT	1 cut(s)	123
AhlI	ACTAGT	1 cut(s)	2282
AjnI	CCWGG	5 cut(s)	466, 1360, 1768, 1804, 2221
AjuI	GAANNNNNNNTTGG	2 cut(s)	1690, 1722
AleI	CACNNNNGTG	1 cut(s)	553
Alw21I	GWGCWC	4 cut(s)	1057, 1208, 1238, 1321
Alw26I	GTCTC	4 cut(s)	146, 617, 1264, 1971
Alw44I	GTGCAC	1 cut(s)	1234
AlwI	GGATC	4 cut(s)	571, 756, 1619, 1632
AlwNI	CAGNNNCTG	1 cut(s)	1361
Aor13HI	TCCGGA	3 cut(s)	311, 1577, 2036
AoxI	GGCC	4 cut(s)	306, 739, 1407, 1868
ApaLI	GTGCAC	1 cut(s)	1234
ApeKI	GCWGC	7 cut(s)	639, 1455, 1733, 1828, 2114, 2239, 2459
ApoI	RAATTY	4 cut(s)	391, 671, 1399, 1698
ArsI	GACNNNNNNTTYG	2 cut(s)	439, 471
AseI	ATTAAT	1 cut(s)	1947
AsiGI	ACCGGT	1 cut(s)	123
AspLEI	GCGC	2 cut(s)	1645, 2548
AspS9I	GGNCC	4 cut(s)	493, 1182, 1281, 1904
AsuHPI	GGTGA	2 cut(s)	1091, 1820
AsuNHI	GCTAGC	1 cut(s)	560
AvaII	GGWCC	4 cut(s)	493, 1182, 1281, 1904
BaeGI	GKGCMC	2 cut(s)	382, 1238
BaeI	ACNNNNGTAYC	2 cut(s)	2325, 2358
BamHI	GGATCC	1 cut(s)	1624
BanII	GRGCYC	2 cut(s)	709, 1321
BarI	GAAGNNNNNNTAC	4 cut(s)	39, 71, 2278, 2310
Bbv12I	GWGCWC	4 cut(s)	1057, 1208, 1238, 1321
BbvI	GCAGC	7 cut(s)	651, 1442, 1745, 1815, 2101, 2251, 2471
BccI	CCATC	5 cut(s)	208, 670, 793, 1272, 2318
BcgI	CGANNNNNNTGC	2 cut(s)	2179, 2213
BciT130I	CCWGG	5 cut(s)	468, 1362, 1770, 1806, 2223
BciVI	GTATCC	1 cut(s)	2353
BclI	TGATCA	1 cut(s)	1606
BcoDI	GTCTC	4 cut(s)	146, 617, 1264, 1971
BcuI	ACTAGT	1 cut(s)	2282
BfaI	CTAG	7 cut(s)	561, 1337, 1490, 2204, 2283, 2439, 2543
BfmI	CTRYAG	1 cut(s)	2422
BfoI	RGCGCY	1 cut(s)	2549
BfrI	CTTAAG	1 cut(s)	323
BfuI	GTATCC	1 cut(s)	2353
BisI	GCNGC	8 cut(s)	640, 1456, 1734, 1829, 1920, 2115, 2240, 2460
BlsI	GCNGC	8 cut(s)	641, 1457, 1735, 1830, 1921, 2116, 2241, 2461
BmcAI	AGTACT	3 cut(s)	401, 809, 1111
Bme1390I	CCNGG	5 cut(s)	468, 1362, 1770, 1806, 2223
Bme18I	GGWCC	4 cut(s)	493, 1182, 1281, 1904
BmgT120I	GGNCC	4 cut(s)	493, 1182, 1281, 1904
BmiI	GGNNCC	4 cut(s)	495, 708, 1626, 2094
BmrFI	CCNGG	5 cut(s)	468, 1362, 1770, 1806, 2223
BmrI	ACTGGG	2 cut(s)	1397, 1948
BmsI	GCATC	4 cut(s)	364, 922, 1350, 2101
BmtI	GCTAGC	1 cut(s)	564
BmuI	ACTGGG	2 cut(s)	1397, 1948
BpmI	CTGGAG	2 cut(s)	1383, 1752
Bpu10I	CCTNAGC	1 cut(s)	2517
BpuEI	CTTGAG	6 cut(s)	143, 556, 759, 1540, 1844, 2029
Bsa29I	ATCGAT	2 cut(s)	679, 1084
BsaI	GGTCTC	2 cut(s)	1264, 1971
BsaJI	CCNNGG	6 cut(s)	466, 1404, 1420, 2260, 2337, 2528
BsaWI	WCCGGW	6 cut(s)	123, 276, 311, 1154, 1577, 2036
BsaXI	ACNNNNNCTCC	2 cut(s)	1792, 1822
Bsc4I	CCNNNNNNNGG	6 cut(s)	467, 482, 1426, 1769, 2102, 2286
Bse118I	RCCGGY	1 cut(s)	123
Bse3DI	GCAATG	2 cut(s)	335, 2368
BseAI	TCCGGA	3 cut(s)	311, 1577, 2036
BseBI	CCWGG	5 cut(s)	468, 1362, 1770, 1806, 2223
BseCI	ATCGAT	2 cut(s)	679, 1084
BseDI	CCNNGG	6 cut(s)	466, 1404, 1420, 2260, 2337, 2528
BseGI	GGATG	8 cut(s)	93, 219, 355, 804, 897, 1341, 2329, 2497
BseLI	CCNNNNNNNGG	6 cut(s)	467, 482, 1426, 1769, 2102, 2286
BseMI	GCAATG	2 cut(s)	335, 2368
BseMII	CTCAG	5 cut(s)	116, 230, 1209, 1745, 1863
BseRI	GAGGAG	2 cut(s)	1241, 1529
BseSI	GKGCMC	2 cut(s)	382, 1238
BseXI	GCAGC	7 cut(s)	651, 1442, 1745, 1815, 2101, 2251, 2471
BsgI	GTGCAG	3 cut(s)	852, 1016, 2258
Bsh1236I	CGCG	1 cut(s)	1643
BshFI	GGCC	4 cut(s)	308, 741, 1409, 1870
BshTI	ACCGGT	1 cut(s)	123
BshVI	ATCGAT	2 cut(s)	679, 1084
BsiHKAI	GWGCWC	4 cut(s)	1057, 1208, 1238, 1321
BsiSI	CCGG	6 cut(s)	124, 277, 312, 1155, 1578, 2037
BslFI	GGGAC	6 cut(s)	1174, 1366, 1681, 1955, 2303, 2536
BslI	CCNNNNNNNGG	6 cut(s)	467, 482, 1426, 1769, 2102, 2286
BsmAI	GTCTC	4 cut(s)	146, 617, 1264, 1971
BsmFI	GGGAC	6 cut(s)	1174, 1366, 1681, 1955, 2303, 2536
BsmI	GAATGC	1 cut(s)	2407
BsnI	GGCC	4 cut(s)	308, 741, 1409, 1870
Bso31I	GGTCTC	2 cut(s)	1264, 1971
Bsp1286I	GDGCHC	6 cut(s)	382, 709, 1057, 1208, 1238, 1321
Bsp13I	TCCGGA	3 cut(s)	311, 1577, 2036
Bsp1407I	TGTACA	1 cut(s)	86
Bsp143I	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
Bsp19I	CCATGG	1 cut(s)	1420
BspACI	CCGC	7 cut(s)	297, 452, 642, 1301, 1661, 1919, 2580
BspANI	GGCC	4 cut(s)	308, 741, 1409, 1870
BspCNI	CTCAG	5 cut(s)	115, 231, 1210, 1746, 1864
BspDI	ATCGAT	2 cut(s)	679, 1084
BspEI	TCCGGA	3 cut(s)	311, 1577, 2036
BspFNI	CGCG	1 cut(s)	1643
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	4 cut(s)	495, 708, 1626, 2094
BspMAI	CTGCAG	1 cut(s)	2426
BspOI	GCTAGC	1 cut(s)	564
BspPI	GGATC	4 cut(s)	571, 756, 1619, 1632
BspQI	GCTCTTC	1 cut(s)	5
BspTI	CTTAAG	1 cut(s)	323
BspTNI	GGTCTC	2 cut(s)	1264, 1971
BsrDI	GCAATG	2 cut(s)	335, 2368
BsrFI	RCCGGY	1 cut(s)	123
BsrGI	TGTACA	1 cut(s)	86
BssAI	RCCGGY	1 cut(s)	123
BssECI	CCNNGG	6 cut(s)	466, 1404, 1420, 2260, 2337, 2528
BssMI	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
BssT1I	CCWWGG	3 cut(s)	1404, 1420, 2528
Bst2UI	CCWGG	5 cut(s)	468, 1362, 1770, 1806, 2223
Bst4CI	ACNGT	7 cut(s)	611, 821, 848, 1603, 1786, 2211, 2341
Bst6I	CTCTTC	5 cut(s)	5, 620, 1141, 1506, 2173
BstAFI	CTTAAG	1 cut(s)	323
BstAUI	TGTACA	1 cut(s)	86
BstC8I	GCNNGC	9 cut(s)	562, 739, 990, 999, 1171, 1204, 1317, 1917, 2464
BstDSI	CCRYGG	2 cut(s)	1420, 2337
BstF5I	GGATG	8 cut(s)	93, 219, 355, 804, 897, 1341, 2329, 2497
BstFNI	CGCG	1 cut(s)	1643
BstH2I	RGCGCY	1 cut(s)	2549
BstHHI	GCGC	2 cut(s)	1645, 2548
BstKTI	GATC	9 cut(s)	579, 679, 751, 1084, 1088, 1609, 1627, 1867, 2218
BstMAI	GTCTC	4 cut(s)	146, 617, 1264, 1971
BstMBI	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
BstMWI	GCNNNNNNNGC	6 cut(s)	770, 994, 998, 1461, 1733, 2123
BstNI	CCWGG	5 cut(s)	468, 1362, 1770, 1806, 2223
BstNSI	RCATGY	4 cut(s)	1252, 1381, 2155, 2278
BstSCI	CCNGG	5 cut(s)	466, 1360, 1768, 1804, 2221
BstSFI	CTRYAG	1 cut(s)	2422
BstSLI	GKGCMC	2 cut(s)	382, 1238
BstUI	CGCG	1 cut(s)	1643
BstV1I	GCAGC	7 cut(s)	651, 1442, 1745, 1815, 2101, 2251, 2471
BstX2I	RGATCY	2 cut(s)	576, 1624
BstYI	RGATCY	2 cut(s)	576, 1624
Bsu15I	ATCGAT	2 cut(s)	679, 1084
BsuI	GTATCC	1 cut(s)	2353
BsuRI	GGCC	4 cut(s)	308, 741, 1409, 1870
BsuTUI	ATCGAT	2 cut(s)	679, 1084
BtgI	CCRYGG	2 cut(s)	1420, 2337
BtsCI	GGATG	8 cut(s)	93, 219, 355, 804, 897, 1341, 2329, 2497
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	7 cut(s)	853, 999, 1074, 1385, 1464, 2106, 2485
Cac8I	GCNNGC	9 cut(s)	562, 739, 990, 999, 1171, 1204, 1317, 1917, 2464
CaiI	CAGNNNCTG	1 cut(s)	1361
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	2 cut(s)	1645, 2548
Cfr10I	RCCGGY	1 cut(s)	123
Cfr13I	GGNCC	4 cut(s)	493, 1182, 1281, 1904
ClaI	ATCGAT	2 cut(s)	679, 1084
Csp6I	GTAC	7 cut(s)	87, 274, 400, 808, 844, 1110, 1876
CspAI	ACCGGT	1 cut(s)	123
CviQI	GTAC	7 cut(s)	87, 274, 400, 808, 844, 1110, 1876
DpnI	GATC	9 cut(s)	578, 678, 750, 1083, 1087, 1608, 1626, 1866, 2217
DpnII	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
Eam1104I	CTCTTC	5 cut(s)	5, 620, 1141, 1506, 2173
EarI	CTCTTC	5 cut(s)	5, 620, 1141, 1506, 2173
Ecl136II	GAGCTC	1 cut(s)	1319
Eco130I	CCWWGG	3 cut(s)	1404, 1420, 2528
Eco147I	AGGCCT	2 cut(s)	308, 741
Eco24I	GRGCYC	2 cut(s)	709, 1321
Eco31I	GGTCTC	2 cut(s)	1264, 1971
Eco32I	GATATC	2 cut(s)	647, 837
Eco47I	GGWCC	4 cut(s)	493, 1182, 1281, 1904
Eco53kI	GAGCTC	1 cut(s)	1319
Eco57I	CTGAAG	4 cut(s)	1274, 1641, 2154, 2280
EcoICRI	GAGCTC	1 cut(s)	1319
EcoO109I	RGGNCCY	1 cut(s)	493
EcoRI	GAATTC	1 cut(s)	1698
EcoRII	CCWGG	5 cut(s)	466, 1360, 1768, 1804, 2221
EcoRV	GATATC	2 cut(s)	647, 837
EcoT14I	CCWWGG	3 cut(s)	1404, 1420, 2528
EcoT38I	GRGCYC	2 cut(s)	709, 1321
ErhI	CCWWGG	3 cut(s)	1404, 1420, 2528
FalI	AAGNNNNNCTT	2 cut(s)	1881, 1913
FaqI	GGGAC	6 cut(s)	1174, 1366, 1681, 1955, 2303, 2536
FauI	CCCGC	1 cut(s)	445
FauNDI	CATATG	1 cut(s)	1297
FbaI	TGATCA	1 cut(s)	1606
FblI	GTMKAC	1 cut(s)	2555
Fnu4HI	GCNGC	8 cut(s)	640, 1456, 1734, 1829, 1920, 2115, 2240, 2460
FokI	GGATG	8 cut(s)	80, 226, 342, 811, 904, 1328, 2336, 2484
FriOI	GRGCYC	2 cut(s)	709, 1321
Fsp4HI	GCNGC	8 cut(s)	640, 1456, 1734, 1829, 1920, 2115, 2240, 2460
FspBI	CTAG	7 cut(s)	561, 1337, 1490, 2204, 2283, 2439, 2543
GlaI	GCGC	2 cut(s)	1644, 2547
GluI	GCNGC	8 cut(s)	640, 1456, 1734, 1829, 1920, 2115, 2240, 2460
GsuI	CTGGAG	2 cut(s)	1383, 1752
HaeII	RGCGCY	1 cut(s)	2549
HaeIII	GGCC	4 cut(s)	308, 741, 1409, 1870
HapII	CCGG	6 cut(s)	124, 277, 312, 1155, 1578, 2037
HhaI	GCGC	2 cut(s)	1645, 2548
Hin6I	GCGC	2 cut(s)	1643, 2546
HinP1I	GCGC	2 cut(s)	1643, 2546
HincII	GTYRAC	2 cut(s)	1132, 2556
HindII	GTYRAC	2 cut(s)	1132, 2556
HindIII	AAGCTT	1 cut(s)	1558
HpaI	GTTAAC	1 cut(s)	1132
HpaII	CCGG	6 cut(s)	124, 277, 312, 1155, 1578, 2037
HphI	GGTGA	2 cut(s)	1091, 1820
Hpy166II	GTNNAC	6 cut(s)	607, 1132, 1236, 2157, 2280, 2556
Hpy188III	TCNNGA	7 cut(s)	312, 1089, 1100, 1369, 1578, 2037, 2096
Hpy8I	GTNNAC	6 cut(s)	607, 1132, 1236, 2157, 2280, 2556
HpyAV	CCTTC	9 cut(s)	62, 73, 369, 1249, 1447, 2004, 2322, 2360, 2569
HpyCH4III	ACNGT	7 cut(s)	611, 821, 848, 1603, 1786, 2211, 2341
HpyCH4IV	ACGT	2 cut(s)	1125, 1685
HpyF10VI	GCNNNNNNNGC	6 cut(s)	770, 994, 998, 1461, 1733, 2123
HpySE526I	ACGT	2 cut(s)	1125, 1685
HspAI	GCGC	2 cut(s)	1643, 2546
Kpn2I	TCCGGA	3 cut(s)	311, 1577, 2036
Ksp22I	TGATCA	1 cut(s)	1606
KspAI	GTTAAC	1 cut(s)	1132
Kzo9I	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
LguI	GCTCTTC	1 cut(s)	5
LmnI	GCTCC	4 cut(s)	228, 712, 1531, 1771
Lsp1109I	GCAGC	7 cut(s)	651, 1442, 1745, 1815, 2101, 2251, 2471
LweI	GCATC	4 cut(s)	364, 922, 1350, 2101
MaeI	CTAG	7 cut(s)	561, 1337, 1490, 2204, 2283, 2439, 2543
MaeII	ACGT	2 cut(s)	1125, 1685
MaeIII	GTNAC	6 cut(s)	790, 1072, 1786, 1808, 1934, 2147
MalI	GATC	9 cut(s)	578, 678, 750, 1083, 1087, 1608, 1626, 1866, 2217
MboI	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
MfeI	CAATTG	2 cut(s)	1041, 2076
MflI	RGATCY	2 cut(s)	576, 1624
MhlI	GDGCHC	6 cut(s)	382, 709, 1057, 1208, 1238, 1321
MlyI	GAGTC	9 cut(s)	1238, 1374, 1451, 1647, 1810, 2042, 2130, 2360, 2441
MmeI	TCCRAC	3 cut(s)	383, 393, 1209
MroI	TCCGGA	3 cut(s)	311, 1577, 2036
MseI	TTAA	9 cut(s)	324, 428, 693, 782, 1131, 1593, 1857, 1947, 2066
MslI	CAYNNNNRTG	4 cut(s)	553, 797, 1146, 1929
MspA1I	CMGCKG	3 cut(s)	452, 642, 1661
MspCI	CTTAAG	1 cut(s)	323
MspI	CCGG	6 cut(s)	124, 277, 312, 1155, 1578, 2037
MspR9I	CCNGG	5 cut(s)	468, 1362, 1770, 1806, 2223
MunI	CAATTG	2 cut(s)	1041, 2076
Mva1269I	GAATGC	1 cut(s)	2407
MvaI	CCWGG	5 cut(s)	468, 1362, 1770, 1806, 2223
MvnI	CGCG	1 cut(s)	1643
MwoI	GCNNNNNNNGC	6 cut(s)	770, 994, 998, 1461, 1733, 2123
NcoI	CCATGG	1 cut(s)	1420
NdeI	CATATG	1 cut(s)	1297
NdeII	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
NheI	GCTAGC	1 cut(s)	560
NlaIV	GGNNCC	4 cut(s)	495, 708, 1626, 2094
NmuCI	GTSAC	5 cut(s)	790, 1072, 1786, 1808, 2147
NspI	RCATGY	4 cut(s)	1252, 1381, 2155, 2278
OliI	CACNNNNGTG	1 cut(s)	553
PagI	TCATGA	1 cut(s)	1368
PceI	AGGCCT	2 cut(s)	308, 741
PciI	ACATGT	2 cut(s)	2151, 2274
PciSI	GCTCTTC	1 cut(s)	5
PctI	GAATGC	1 cut(s)	2407
PfeI	GAWTC	8 cut(s)	203, 416, 1475, 1496, 1715, 2072, 2448, 2570
PflMI	CCANNNNNTGG	1 cut(s)	467
PfoI	TCCNGGA	1 cut(s)	2221
PinAI	ACCGGT	1 cut(s)	123
PkrI	GCNGC	8 cut(s)	641, 1457, 1735, 1830, 1921, 2116, 2241, 2461
PleI	GAGTC	9 cut(s)	1237, 1373, 1450, 1646, 1809, 2041, 2130, 2359, 2440
PpsI	GAGTC	9 cut(s)	1237, 1373, 1450, 1646, 1809, 2041, 2130, 2359, 2440
PpuMI	RGGWCCY	1 cut(s)	493
PscI	ACATGT	2 cut(s)	2151, 2274
PshBI	ATTAAT	1 cut(s)	1947
PsiI	TTATAA	3 cut(s)	909, 1245, 2144
Psp124BI	GAGCTC	1 cut(s)	1321
Psp1406I	AACGTT	1 cut(s)	1125
Psp5II	RGGWCCY	1 cut(s)	493
Psp6I	CCWGG	5 cut(s)	466, 1360, 1768, 1804, 2221
PspGI	CCWGG	5 cut(s)	466, 1360, 1768, 1804, 2221
PspN4I	GGNNCC	4 cut(s)	495, 708, 1626, 2094
PspPI	GGNCC	4 cut(s)	493, 1182, 1281, 1904
PspPPI	RGGWCCY	1 cut(s)	493
PstI	CTGCAG	1 cut(s)	2426
PstNI	CAGNNNCTG	1 cut(s)	1361
PsuI	RGATCY	2 cut(s)	576, 1624
RsaI	GTAC	7 cut(s)	88, 275, 401, 809, 845, 1111, 1877
RsaNI	GTAC	7 cut(s)	87, 274, 400, 808, 844, 1110, 1876
RseI	CAYNNNNRTG	4 cut(s)	553, 797, 1146, 1929
SacI	GAGCTC	1 cut(s)	1321
SalI	GTCGAC	1 cut(s)	2554
SapI	GCTCTTC	1 cut(s)	5
SaqAI	TTAA	9 cut(s)	324, 428, 693, 782, 1131, 1593, 1857, 1947, 2066
SatI	GCNGC	8 cut(s)	640, 1456, 1734, 1829, 1920, 2115, 2240, 2460
Sau3AI	GATC	9 cut(s)	576, 676, 748, 1081, 1085, 1606, 1624, 1864, 2215
Sau96I	GGNCC	4 cut(s)	493, 1182, 1281, 1904
ScaI	AGTACT	3 cut(s)	401, 809, 1111
SchI	GAGTC	9 cut(s)	1238, 1374, 1451, 1647, 1810, 2042, 2130, 2360, 2441
ScrFI	CCNGG	5 cut(s)	468, 1362, 1770, 1806, 2223
SduI	GDGCHC	6 cut(s)	382, 709, 1057, 1208, 1238, 1321
SfaNI	GCATC	4 cut(s)	364, 922, 1350, 2101
SfcI	CTRYAG	1 cut(s)	2422
SinI	GGWCC	4 cut(s)	493, 1182, 1281, 1904
SmiMI	CAYNNNNRTG	4 cut(s)	553, 797, 1146, 1929
SmlI	CTYRAG	7 cut(s)	158, 323, 535, 774, 1555, 1823, 2044
SmoI	CTYRAG	7 cut(s)	158, 323, 535, 774, 1555, 1823, 2044
SpeI	ACTAGT	1 cut(s)	2282
SseBI	AGGCCT	2 cut(s)	308, 741
SsiI	CCGC	7 cut(s)	297, 452, 642, 1301, 1661, 1919, 2580
SspI	AATATT	1 cut(s)	171
SspMI	CTAG	7 cut(s)	561, 1337, 1490, 2204, 2283, 2439, 2543
SstI	GAGCTC	1 cut(s)	1321
StuI	AGGCCT	2 cut(s)	308, 741
StyD4I	CCNGG	5 cut(s)	466, 1360, 1768, 1804, 2221
StyI	CCWWGG	3 cut(s)	1404, 1420, 2528
TaaI	ACNGT	7 cut(s)	611, 821, 848, 1603, 1786, 2211, 2341
TaiI	ACGT	2 cut(s)	1128, 1688
TaqI	TCGA	6 cut(s)	679, 963, 1084, 1090, 1440, 2555
TatI	WGTACW	5 cut(s)	86, 399, 807, 843, 1109
TauI	GCSGC	1 cut(s)	1922
TfiI	GAWTC	8 cut(s)	203, 416, 1475, 1496, 1715, 2072, 2448, 2570
Tru1I	TTAA	9 cut(s)	324, 428, 693, 782, 1131, 1593, 1857, 1947, 2066
Tru9I	TTAA	9 cut(s)	324, 428, 693, 782, 1131, 1593, 1857, 1947, 2066
TscAI	CASTG	7 cut(s)	853, 999, 1081, 1392, 1471, 2113, 2485
TseFI	GTSAC	5 cut(s)	790, 1072, 1786, 1808, 2147
TseI	GCWGC	7 cut(s)	639, 1455, 1733, 1828, 2114, 2239, 2459
Tsp45I	GTSAC	5 cut(s)	790, 1072, 1786, 1808, 2147
TspGWI	ACGGA	1 cut(s)	1896
TspRI	CASTG	7 cut(s)	853, 999, 1081, 1392, 1471, 2113, 2485
Van91I	CCANNNNNTGG	1 cut(s)	467
Vha464I	CTTAAG	1 cut(s)	323
VneI	GTGCAC	1 cut(s)	1234
VpaK11BI	GGWCC	4 cut(s)	493, 1182, 1281, 1904
VspI	ATTAAT	1 cut(s)	1947
XapI	RAATTY	4 cut(s)	391, 671, 1399, 1698
XceI	RCATGY	4 cut(s)	1252, 1381, 2155, 2278
XcmI	CCANNNNNNNNNTGG	1 cut(s)	483
XmiI	GTMKAC	1 cut(s)	2555
XspI	CTAG	7 cut(s)	561, 1337, 1490, 2204, 2283, 2439, 2543
ZrmI	AGTACT	3 cut(s)	401, 809, 1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.