Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007098

Physical Location & Seq

Genomic Coordinates Forward (+)

5130449 .. 5133267

Gene Structure 2819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G15730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGGTGAATAGAAGTGATTTGGTGGTGATTGGCATCTCGGTTGGGCTTGCACTTGGTCTCTTGCTCGCTCTGCTTTTGTTCTTCGCCATAAAATGGTACTATGGCCGCTCTCACCTCAGGCGATGCGCTAATGAACAGAATTCCCCGACTCTACCTGTTCACACTGCTAAAAGAGGTGTAGTAATCCCTGATGATAGAGCAAACACAGAATCGTCACAGCCACCTGAGAATGGAGCACCAACTCAACATCAGCCATGGTGGAACAACCACACCAAAGATCTCACTGTATCTGCATCCGGCATACCTAGATATAACTACAAGGATATTCAGAAAGCAACACAAAATTTCACAACCGTTCTAGGACAAGGATCTTTTGGTCCTGTCTACAAAGCGGTTATGCCCAATGGAGAATTAGCTGCAGCGAAAGTTCATGGCTCTAATTCAAGTCAAGGAGACAGAGAGTTTCAAACCGAGGTATCTTTACTTGGGAGACTGCATCACCGGAATCTTGTGAACTTGACAGGATACTGTGTCGATAAAAGTCACCGGATGTTGATCTATGAGTTCATGAGTAATGGAAGTTTGGAGAATCTTTTGTATGGCGGAATGCAAGTCTTGAATTGGGAAGAGCGGCTTCAAATCGCTCTTGACATCTCCCACGGCATTGAATACCTTCACGAAGGGGCCGTACCGCCAGTTATTCACCGTGATCTTAAGTCAGCAAACATTTTGTTAGATCATTCCATGAGAGCTAAGGTCGCGGATTTCGGGTTGTCGAAAGAGATGGTTTTAGATAGAATGACTTCCGGATTGAAGGGTACTCACGGCTACATGGATCCAACATACATTTCGACTAACAAATACACGATGAAGAGCGACATTTACAGTTTCGGTGTCATCATTCTTGAGCTCATTACTGCAATCCATCCCCAACAGAATCTGATGGAATACATCAACCTGGCTTCGATGAGTCCAGATGGTATCGACGAAATACTCGATCAGAAACTAGTGGGAAACGCAAGCATTGAAGAAGTGAGGTTACTGGCGAAGATTGCAAACAGGTGTGTGCATAAGACACCAAGAAAAAGACCATCTATTGGAGAAGTAACACAGTTCATACTAAAGATCAAACAAAGTCGGTCTCGAGGAAGAAGACAGGACACGATGTCTTCATCGTTTGGTGTTGGTTATGAGGAAGATCTGTCAAGGGTTATGAGCAGGATTAAGGATCAGCATGTTGAGTTAGGGTTATTGGCTGGTGTTAAGGAAGAGAATCATCAAGAGAGGAACATTGCAACAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

434

Amino Acids

48.57

Weight (kDa)

8.55

Isoelectric Point (pI)

39.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	116 - 371	4.2e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	118 - 371	6.6e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15730 AT5G15730 AT5G15730
fragaria_vesca	FvH4_6g46190 FvH4_6g46190 FvH4_6g46190 FvH4_6g46190 FvH4_6g46190 FvH4_6g46190
malus_domestica	MD09G1076200.v1.1
prunus_persica	Prupe.3G247800_v2.0.a1
pyrus_communis	pycom09g00350
rosa_chinensis	RchiOBHm_Chr2g0164631
rosa_laevigata	RLG00000021472
rosa_multiflora	Rmu_co8438103.1_g000001 Rmu_sc0000946.1_g000004 Rmu_sc0023927.1_g000001 Rmu_ssc0000076.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086420
rosa_rugosa	Rorug02G0509500 Rorug02G0509500
rosa_samantha	Rh2AG577300 Rh2CG559300 Rh2DG599100
rosa_wichuraiana	Rw2G047940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	93, 1097
AccBSI	CCGCTC	2 cut(s)	108, 631
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	1 cut(s)	761
AccIII	TCCGGA	1 cut(s)	806
AciI	CCGC	6 cut(s)	106, 392, 603, 631, 692, 761
AclWI	GGATC	4 cut(s)	376, 830, 843, 1236
AcoI	YGGCCR	1 cut(s)	103
AcsI	RAATTY	2 cut(s)	139, 343
AfaI	GTAC	3 cut(s)	98, 690, 820
AfiI	CCNNNNNNNGG	3 cut(s)	93, 230, 1097
AflII	CTTAAG	1 cut(s)	713
AgsI	TTSAA	7 cut(s)	444, 467, 619, 638, 668, 814, 1028
AhdI	GACNNNNNGTC	1 cut(s)	1165
AhlI	ACTAGT	1 cut(s)	1006
AjnI	CCWGG	1 cut(s)	957
AjuI	GAANNNNNNNTTGG	2 cut(s)	832, 864
AluBI	AGCT	3 cut(s)	416, 752, 910
AluI	AGCT	3 cut(s)	416, 752, 910
Alw21I	GWGCWC	2 cut(s)	238, 912
Alw26I	GTCTC	4 cut(s)	62, 447, 484, 1146
AlwI	GGATC	4 cut(s)	376, 830, 843, 1236
AlwNI	CAGNNNCTG	1 cut(s)	940
Ama87I	CYCGRG	1 cut(s)	1143
Aor13HI	TCCGGA	1 cut(s)	806
AoxI	GGCC	2 cut(s)	103, 684
ApeKI	GCWGC	2 cut(s)	416, 419
ApoI	RAATTY	2 cut(s)	139, 343
Asp700I	GAANNNNTTC	2 cut(s)	672, 802
AspLEI	GCGC	1 cut(s)	128
AspS9I	GGNCC	2 cut(s)	377, 684
AsuHPI	GGTGA	6 cut(s)	16, 37, 104, 491, 536, 695
AvaI	CYCGRG	1 cut(s)	1143
AvaII	GGWCC	1 cut(s)	377
AxyI	CCTNAGG	1 cut(s)	116
BaeI	ACNNNNGTAYC	2 cut(s)	459, 492
BamHI	GGATCC	1 cut(s)	835
BanII	GRGCYC	1 cut(s)	912
BarI	GAAGNNNNNNTAC	4 cut(s)	672, 704, 1023, 1055
BbsI	GAAGAC	2 cut(s)	1159, 1161
Bbv12I	GWGCWC	2 cut(s)	238, 912
BbvI	GCAGC	2 cut(s)	403, 431
BccI	CCATC	5 cut(s)	778, 933, 937, 971, 1099
BceAI	ACGGC	3 cut(s)	671, 676, 841
BciT130I	CCWGG	1 cut(s)	959
BciVI	GTATCC	1 cut(s)	518
BcoDI	GTCTC	4 cut(s)	62, 447, 484, 1146
BcuI	ACTAGT	1 cut(s)	1006
BfaI	CTAG	3 cut(s)	306, 359, 1007
BfmI	CTRYAG	1 cut(s)	417
BfrI	CTTAAG	1 cut(s)	713
BfuI	GTATCC	1 cut(s)	518
BglII	AGATCT	2 cut(s)	277, 1198
BisI	GCNGC	4 cut(s)	106, 417, 420, 632
BlsI	GCNGC	4 cut(s)	107, 418, 421, 633
Bme1390I	CCNGG	1 cut(s)	959
Bme18I	GGWCC	1 cut(s)	377
BmeRI	GACNNNNNGTC	1 cut(s)	1165
BmeT110I	CYCGRG	1 cut(s)	1143
BmgT120I	GGNCC	2 cut(s)	377, 684
BmiI	GGNNCC	2 cut(s)	685, 837
BmrFI	CCNGG	1 cut(s)	959
BmsI	GCATC	4 cut(s)	42, 113, 302, 505
BpiI	GAAGAC	2 cut(s)	1159, 1161
Bpu10I	CCTNAGC	1 cut(s)	753
BpuEI	CTTGAG	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	32, 554
BsaI	GGTCTC	2 cut(s)	62, 1146
BsaJI	CCNNGG	3 cut(s)	254, 471, 658
BsaWI	WCCGGW	3 cut(s)	501, 546, 806
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 230, 1097
Bse1I	ACTGG	2 cut(s)	695, 1047
Bse21I	CCTNAGG	1 cut(s)	116
Bse3DI	GCAATG	1 cut(s)	1290
Bse8I	GATNNNNATC	2 cut(s)	32, 554
BseAI	TCCGGA	1 cut(s)	806
BseBI	CCWGG	1 cut(s)	959
BseDI	CCNNGG	3 cut(s)	254, 471, 658
BseGI	GGATG	3 cut(s)	293, 555, 925
BseJI	GATNNNNATC	2 cut(s)	32, 554
BseLI	CCNNNNNNNGG	3 cut(s)	93, 230, 1097
BseMI	GCAATG	1 cut(s)	1290
BseMII	CTCAG	2 cut(s)	130, 216
BseNI	ACTGG	2 cut(s)	695, 1047
BseXI	GCAGC	2 cut(s)	403, 431
Bsh1236I	CGCG	1 cut(s)	761
BshFI	GGCC	2 cut(s)	105, 686
BsiHKAI	GWGCWC	2 cut(s)	238, 912
BsiHKCI	CYCGRG	1 cut(s)	1143
BsiSI	CCGG	4 cut(s)	297, 502, 547, 807
BslI	CCNNNNNNNGG	3 cut(s)	93, 230, 1097
BsmAI	GTCTC	4 cut(s)	62, 447, 484, 1146
BsmI	GAATGC	1 cut(s)	612
BsnI	GGCC	2 cut(s)	105, 686
Bso31I	GGTCTC	2 cut(s)	62, 1146
BsoBI	CYCGRG	1 cut(s)	1143
Bsp1286I	GDGCHC	2 cut(s)	238, 912
Bsp13I	TCCGGA	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	254
BspACI	CCGC	6 cut(s)	106, 392, 603, 631, 692, 761
BspANI	GGCC	2 cut(s)	105, 686
BspCNI	CTCAG	2 cut(s)	129, 217
BspEI	TCCGGA	1 cut(s)	806
BspFNI	CGCG	1 cut(s)	761
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	2 cut(s)	685, 837
BspMAI	CTGCAG	1 cut(s)	421
BspPI	GGATC	4 cut(s)	376, 830, 843, 1236
BspQI	GCTCTTC	2 cut(s)	621, 866
BspTI	CTTAAG	1 cut(s)	713
BspTNI	GGTCTC	2 cut(s)	62, 1146
BsrBI	CCGCTC	2 cut(s)	108, 631
BsrDI	GCAATG	1 cut(s)	1290
BsrI	ACTGG	2 cut(s)	695, 1047
BssECI	CCNNGG	3 cut(s)	254, 471, 658
BssT1I	CCWWGG	1 cut(s)	254
Bst2UI	CCWGG	1 cut(s)	959
Bst4CI	ACNGT	6 cut(s)	286, 355, 530, 707, 887, 1113
Bst6I	CTCTTC	3 cut(s)	621, 866, 1263
BstAFI	CTTAAG	1 cut(s)	713
BstC8I	GCNNGC	3 cut(s)	48, 66, 1021
BstDEI	CTNAG	3 cut(s)	116, 225, 753
BstDSI	CCRYGG	2 cut(s)	254, 658
BstF5I	GGATG	3 cut(s)	293, 555, 925
BstFNI	CGCG	1 cut(s)	761
BstHHI	GCGC	1 cut(s)	128
BstMAI	GTCTC	4 cut(s)	62, 447, 484, 1146
BstMWI	GCNNNNNNNGC	3 cut(s)	70, 758, 1052
BstNI	CCWGG	1 cut(s)	959
BstNSI	RCATGY	1 cut(s)	1238
BstSCI	CCNGG	1 cut(s)	957
BstSFI	CTRYAG	1 cut(s)	417
BstUI	CGCG	1 cut(s)	761
BstV1I	GCAGC	2 cut(s)	403, 431
BstV2I	GAAGAC	2 cut(s)	1159, 1161
BstX2I	RGATCY	4 cut(s)	277, 368, 835, 1198
BstYI	RGATCY	4 cut(s)	277, 368, 835, 1198
Bsu36I	CCTNAGG	1 cut(s)	116
BsuI	GTATCC	1 cut(s)	518
BsuRI	GGCC	2 cut(s)	105, 686
BtgI	CCRYGG	2 cut(s)	254, 658
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	3 cut(s)	293, 555, 925
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	2 cut(s)	162, 282
Cac8I	GCNNGC	3 cut(s)	48, 66, 1021
CaiI	CAGNNNCTG	1 cut(s)	940
CciI	TCATGA	1 cut(s)	567
CfoI	GCGC	1 cut(s)	128
Cfr13I	GGNCC	2 cut(s)	377, 684
Csp6I	GTAC	3 cut(s)	97, 689, 819
CviAII	CATG	6 cut(s)	255, 431, 568, 745, 832, 1235
CviQI	GTAC	3 cut(s)	97, 689, 819
DdeI	CTNAG	3 cut(s)	116, 225, 753
DriI	GACNNNNNGTC	1 cut(s)	1165
EaeI	YGGCCR	1 cut(s)	103
Eam1104I	CTCTTC	3 cut(s)	621, 866, 1263
Eam1105I	GACNNNNNGTC	1 cut(s)	1165
EarI	CTCTTC	3 cut(s)	621, 866, 1263
EciI	GGCGGA	1 cut(s)	618
Ecl136II	GAGCTC	1 cut(s)	910
Eco130I	CCWWGG	1 cut(s)	254
Eco24I	GRGCYC	1 cut(s)	912
Eco31I	GGTCTC	2 cut(s)	62, 1146
Eco47I	GGWCC	1 cut(s)	377
Eco53kI	GAGCTC	1 cut(s)	910
Eco81I	CCTNAGG	1 cut(s)	116
Eco88I	CYCGRG	1 cut(s)	1143
EcoICRI	GAGCTC	1 cut(s)	910
EcoRI	GAATTC	1 cut(s)	139
EcoRII	CCWGG	1 cut(s)	957
EcoT14I	CCWWGG	1 cut(s)	254
EcoT38I	GRGCYC	1 cut(s)	912
ErhI	CCWWGG	1 cut(s)	254
FaeI	CATG	6 cut(s)	258, 434, 571, 748, 835, 1238
FalI	AAGNNNNNCTT	2 cut(s)	618, 650
FatI	CATG	6 cut(s)	254, 430, 567, 744, 831, 1234
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	4 cut(s)	106, 417, 420, 632
FokI	GGATG	3 cut(s)	280, 562, 912
FriOI	GRGCYC	1 cut(s)	912
Fsp4HI	GCNGC	4 cut(s)	106, 417, 420, 632
FspBI	CTAG	3 cut(s)	306, 359, 1007
GlaI	GCGC	1 cut(s)	127
GluI	GCNGC	4 cut(s)	106, 417, 420, 632
HaeIII	GGCC	2 cut(s)	105, 686
HapII	CCGG	4 cut(s)	297, 502, 547, 807
HhaI	GCGC	1 cut(s)	128
Hin1II	CATG	6 cut(s)	258, 434, 571, 748, 835, 1238
Hin6I	GCGC	1 cut(s)	126
HinP1I	GCGC	1 cut(s)	126
HinfI	GANTC	7 cut(s)	148, 209, 505, 589, 937, 970, 1273
HpaII	CCGG	4 cut(s)	297, 502, 547, 807
HphI	GGTGA	6 cut(s)	16, 37, 104, 491, 536, 695
Hpy166II	GTNNAC	3 cut(s)	160, 385, 514
Hpy188I	TCNGA	3 cut(s)	330, 942, 1002
Hpy188III	TCNNGA	9 cut(s)	568, 616, 647, 677, 807, 905, 974, 1143, 1280
Hpy8I	GTNNAC	3 cut(s)	160, 385, 514
Hpy99I	CGWCG	1 cut(s)	989
HpyAV	CCTTC	3 cut(s)	674, 683, 808
HpyCH4III	ACNGT	6 cut(s)	286, 355, 530, 707, 887, 1113
HpyCH4V	TGCA	9 cut(s)	50, 293, 419, 496, 610, 920, 1055, 1069, 1295
HpyF10VI	GCNNNNNNNGC	3 cut(s)	70, 758, 1052
HpyF3I	CTNAG	3 cut(s)	116, 225, 753
Hsp92II	CATG	6 cut(s)	258, 434, 571, 748, 835, 1238
HspAI	GCGC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	806
LguI	GCTCTTC	2 cut(s)	621, 866
LmnI	GCTCC	1 cut(s)	233
Lsp1109I	GCAGC	2 cut(s)	403, 431
LweI	GCATC	4 cut(s)	42, 113, 302, 505
MaeI	CTAG	3 cut(s)	306, 359, 1007
MaeIII	GTNAC	4 cut(s)	213, 542, 1038, 1105
MbiI	CCGCTC	2 cut(s)	108, 631
MflI	RGATCY	4 cut(s)	277, 368, 835, 1198
MhlI	GDGCHC	2 cut(s)	238, 912
MluCI	AATT	5 cut(s)	139, 343, 410, 439, 619
MlyI	GAGTC	2 cut(s)	142, 979
MmeI	TCCRAC	1 cut(s)	863
MnlI	CCTC	7 cut(s)	125, 167, 466, 1029, 1139, 1186, 1278
MroI	TCCGGA	1 cut(s)	806
MroXI	GAANNNNTTC	2 cut(s)	672, 802
MseI	TTAA	3 cut(s)	714, 1224, 1263
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	4 cut(s)	297, 502, 547, 807
MspR9I	CCNGG	1 cut(s)	959
Mva1269I	GAATGC	1 cut(s)	612
MvaI	CCWGG	1 cut(s)	959
MvnI	CGCG	1 cut(s)	761
MwoI	GCNNNNNNNGC	3 cut(s)	70, 758, 1052
NcoI	CCATGG	1 cut(s)	254
NlaIII	CATG	6 cut(s)	258, 434, 571, 748, 835, 1238
NlaIV	GGNNCC	2 cut(s)	685, 837
NmuCI	GTSAC	2 cut(s)	213, 542
NspI	RCATGY	1 cut(s)	1238
PaeR7I	CTCGAG	1 cut(s)	1143
PagI	TCATGA	1 cut(s)	567
PciSI	GCTCTTC	2 cut(s)	621, 866
PcsI	WCGNNNNNNNCGW	2 cut(s)	684, 993
PctI	GAATGC	1 cut(s)	612
PdmI	GAANNNNTTC	2 cut(s)	672, 802
PfeI	GAWTC	5 cut(s)	209, 505, 589, 937, 1273
PflMI	CCANNNNNTGG	2 cut(s)	93, 1097
PkrI	GCNGC	4 cut(s)	107, 418, 421, 633
PleI	GAGTC	2 cut(s)	142, 978
PpsI	GAGTC	2 cut(s)	142, 978
Psp124BI	GAGCTC	1 cut(s)	912
Psp6I	CCWGG	1 cut(s)	957
PspGI	CCWGG	1 cut(s)	957
PspN4I	GGNNCC	2 cut(s)	685, 837
PspPI	GGNCC	2 cut(s)	377, 684
PstI	CTGCAG	1 cut(s)	421
PstNI	CAGNNNCTG	1 cut(s)	940
PsuI	RGATCY	4 cut(s)	277, 368, 835, 1198
RsaI	GTAC	3 cut(s)	98, 690, 820
RsaNI	GTAC	3 cut(s)	97, 689, 819
SacI	GAGCTC	1 cut(s)	912
SapI	GCTCTTC	2 cut(s)	621, 866
SaqAI	TTAA	3 cut(s)	714, 1224, 1263
SatI	GCNGC	4 cut(s)	106, 417, 420, 632
Sau96I	GGNCC	2 cut(s)	377, 684
SchI	GAGTC	2 cut(s)	142, 979
ScrFI	CCNGG	1 cut(s)	959
SduI	GDGCHC	2 cut(s)	238, 912
SfaNI	GCATC	4 cut(s)	42, 113, 302, 505
SfcI	CTRYAG	1 cut(s)	417
Sfr274I	CTCGAG	1 cut(s)	1143
SinI	GGWCC	1 cut(s)	377
SlaI	CTCGAG	1 cut(s)	1143
SmlI	CTYRAG	3 cut(s)	713, 905, 1143
SmoI	CTYRAG	3 cut(s)	713, 905, 1143
SpeI	ACTAGT	1 cut(s)	1006
Sse9I	AATT	5 cut(s)	139, 343, 410, 439, 619
SsiI	CCGC	6 cut(s)	106, 392, 603, 631, 692, 761
SspMI	CTAG	3 cut(s)	306, 359, 1007
SstI	GAGCTC	1 cut(s)	912
StyD4I	CCNGG	1 cut(s)	957
StyI	CCWWGG	1 cut(s)	254
TaaI	ACNGT	6 cut(s)	286, 355, 530, 707, 887, 1113
TaqI	TCGA	7 cut(s)	534, 776, 851, 965, 984, 996, 1144
TaqII	GACCGA	1 cut(s)	1128
TasI	AATT	5 cut(s)	139, 343, 410, 439, 619
TauI	GCSGC	2 cut(s)	108, 634
TfiI	GAWTC	5 cut(s)	209, 505, 589, 937, 1273
Tru1I	TTAA	3 cut(s)	714, 1224, 1263
Tru9I	TTAA	3 cut(s)	714, 1224, 1263
TscAI	CASTG	2 cut(s)	169, 289
TseFI	GTSAC	2 cut(s)	213, 542
TseI	GCWGC	2 cut(s)	416, 419
Tsp45I	GTSAC	2 cut(s)	213, 542
TspDTI	ATGAA	6 cut(s)	147, 419, 556, 884, 1105, 1161
TspRI	CASTG	2 cut(s)	169, 289
Van91I	CCANNNNNTGG	2 cut(s)	93, 1097
Vha464I	CTTAAG	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	377
XapI	RAATTY	2 cut(s)	139, 343
XceI	RCATGY	1 cut(s)	1238
XhoI	CTCGAG	1 cut(s)	1143
XmiI	GTMKAC	1 cut(s)	384
XmnI	GAANNNNTTC	2 cut(s)	672, 802
XspI	CTAG	3 cut(s)	306, 359, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.